miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AP008212.1/23750957-23751199 39947:Oryza sativa
Japonica Group
Length = 243
Score = 264 bits (133), Expect = 5e-70
Identities = 212/242 (87%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||
Sbjct: 242 tactccctccgtcccataatataagggattttgagtttttgcttgcaacgtttgacc-ac 184
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tcgtcttattcaaaaatttttgaaattattaattattttatttgtgacttactttattat 124
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
||| |||||||||||||||||||||| |||||||||||||| ||| |||||||
Sbjct: 123 ctacaatactttaagcataacttttcgttttttatatttgcaaaaaaaatttaaataaga 64
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| |||||||||||||| || | ||||| | ||||| |||||||||||||||| |||||||
Sbjct: 63 caagtggtcaaacgttgcaagcaaaaactgaaaatcccttatattgtgggacggagggag 4
Query: 244 ta 245
||
Sbjct: 3 ta 2
Score = 85.7 bits (43), Expect = 3e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| || ||||||||||||||| |||||||||||| ||||||||| |||
Sbjct: 1 gtactccctccgtcccacaatataagggattttcagtttttgcttgcaacgtttga-cca 59
Query: 63 ctcgtcttatt 73
|| ||||||||
Sbjct: 60 cttgtcttatt 70
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| |||||||||||||| || | ||||| ||||||| ||||||||| |||
Sbjct: 170 tttgaataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgg 229
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 230 gacggagggagta 242
>RF01058;MIR806;AAAA02018370.1/12201-12442 39946:Oryza sativa Indica
Group
Length = 242
Score = 236 bits (119), Expect = 1e-61
Identities = 213/244 (87%), Gaps = 4/244 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgtaacgtttga-ccac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 61 tcgtcttattcaaatttttta-aaattattaattattttatttgtgacttacttta-tat 118
Query: 124 ctaaaatac-tttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
||| | ||| |||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 119 ctatagtacttttaagcacaacttttcattttttatatttgcaaaaaaaatttgaataag 178
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| ||||||||||||||||| | ||||| | ||||| |||||||||||||||| ||||||
Sbjct: 179 acgagtggtcaaacgttacaagcaaaaactgaaaatcccttatattgtgggacggaggga 238
Query: 243 gtag 246
||||
Sbjct: 239 gtag 242
Score = 107 bits (54), Expect = 7e-23
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| || ||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 241 tactccctccgtcccacaatataagggattttcagtttttgcttgtaacgtttga-ccac 183
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 182 tcgtcttattcaaa 169
Score = 91.7 bits (46), Expect = 4e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||||||||| | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacgttacaagcaaaaactcaaaatcccttatattatgg 15
Query: 233 gacagagggagtag 246
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01058;MIR806;AACV01013185.1/13859-13616 39947:Oryza sativa
Japonica Group
Length = 244
Score = 234 bits (118), Expect = 5e-61
Identities = 210/243 (86%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||| ||||||| |||||||||||||||||| |||||||||| ||||||||| ||| ||
Sbjct: 2 tactctctccgtcccataatataagggattttgagtttttgctcgtaacgtttaacc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaatttttttgaaattattaattattttatttgtgacttactttattat 120
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgc-nnnnnnnntttgaataag 182
||| | ||||||||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 121 ctacagtactttaagcacaacttttcgttttttatatttgcaaaaaaaattttgaataag 180
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| |||||||||||||| || ||||||| | ||||| |||||||||||||||| ||||||
Sbjct: 181 acgagtggtcaaacgttgcaagtaaaaactgaaaatcccttatattgtgggacggaggga 240
Query: 243 gta 245
|||
Sbjct: 241 gta 243
Score = 93.7 bits (47), Expect = 1e-18
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| || ||||||||||||||| ||||||| |||| ||||||||| |||
Sbjct: 244 gtactccctccgtcccacaatataagggattttcagtttttacttgcaacgtttga-cca 186
Query: 63 ctcgtcttattcaaa 77
|||||||||||||||
Sbjct: 185 ctcgtcttattcaaa 171
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| |||||| ||||||||| | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggttaaacgttacgagcaaaaactcaaaatcccttatattatgg 15
Query: 233 gacagagggagta 245
||| ||| |||||
Sbjct: 14 gacggagagagta 2
>RF01058;MIR806;AP008210.1/16807344-16807107 39947:Oryza sativa
Japonica Group
Length = 238
Score = 216 bits (109), Expect = 1e-55
Identities = 206/242 (85%), Gaps = 6/242 (2%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| ||||||| |||||| ||||||| ||||
Sbjct: 237 tactccctccgtcccataatataagggattttgagtttttacttgtatcgtttga-ccac 179
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 178 tcgtcttattcaaaaatttttaaaattattatttattttatttgtgacttactttattat 119
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| ||| ||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 118 c-----tacagtaagcataacttttcgttttttatatttgcaaaaaaaatttgaataaga 64
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| ||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||
Sbjct: 63 cgagtggtcaaacgttacaagtaaaaacccaaaatcccttatattgtgggacggagggag 4
Query: 244 ta 245
||
Sbjct: 3 ta 2
Score = 91.7 bits (46), Expect = 4e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| || ||||||||||||||| |||||| |||||||||||||| ||||
Sbjct: 2 tactccctccgtcccacaatataagggattttgggtttttacttgtaacgtttga-ccac 60
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 91.7 bits (46), Expect = 4e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| |||||||||||| |||| ||||||| ||||||| ||||||||| |||
Sbjct: 165 tttgaataagacgagtggtcaaacgatacaagtaaaaactcaaaatcccttatattatgg 224
Query: 233 gacagagggagtag 246
||| ||||||||||
Sbjct: 225 gacggagggagtag 238
>RF01058;MIR806;AL731624.3/57538-57775 39947:Oryza sativa Japonica
Group
Length = 238
Score = 216 bits (109), Expect = 1e-55
Identities = 206/242 (85%), Gaps = 6/242 (2%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| ||||||| |||||| ||||||| ||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttacttgtatcgtttga-ccac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaatttttaaaattattatttattttatttgtgacttactttattat 120
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| ||| ||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 121 c-----tacagtaagcataacttttcgttttttatatttgcaaaaaaaatttgaataaga 175
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| ||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||
Sbjct: 176 cgagtggtcaaacgttacaagtaaaaacccaaaatcccttatattgtgggacggagggag 235
Query: 244 ta 245
||
Sbjct: 236 ta 237
Score = 91.7 bits (46), Expect = 4e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| |||||||||||| |||| ||||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacgatacaagtaaaaactcaaaatcccttatattatgg 15
Query: 233 gacagagggagtag 246
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
Score = 91.7 bits (46), Expect = 4e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| || ||||||||||||||| |||||| |||||||||||||| ||||
Sbjct: 237 tactccctccgtcccacaatataagggattttgggtttttacttgtaacgtttga-ccac 179
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 178 tcgtcttattcaaa 165
>RF01058;MIR806;AAAA02020204.1/6387-6629 39946:Oryza sativa Indica
Group
Length = 243
Score = 210 bits (106), Expect = 7e-54
Identities = 208/243 (85%), Gaps = 3/243 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||| ||||| |||||||||||||||||| |||||||||||| ||||||||||| ||
Sbjct: 2 tactccccccgtcccataatataagggattttgagtttttgcttgcaacgtttgacc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaattttttgaaattattaattattttatttgtgacttactttattat 120
Query: 124 ctaaaatact-ttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
||| |||||| ||||| |||||||||| ||||||||||| | ||| ||||||
Sbjct: 121 ctacaatactgttaagtataacttttc-gtttttatatttacaaaaaaaatttaaataag 179
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| |||||||||||||| || | ||||| | ||||| |||||||||||||||| ||||||
Sbjct: 180 acaagtggtcaaacgttgcaagcaaaaactgaaaatcccttatattgtgggacggaggga 239
Query: 243 gta 245
|||
Sbjct: 240 gta 242
Score = 85.7 bits (43), Expect = 3e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| || ||||||||||||||| |||||||||||| ||||||||| |||
Sbjct: 243 gtactccctccgtcccacaatataagggattttcagtttttgcttgcaacgtttga-cca 185
Query: 63 ctcgtcttatt 73
|| ||||||||
Sbjct: 184 cttgtcttatt 174
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| |||||||||||||| || | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgg 15
Query: 233 gacagagggagta 245
||| | |||||||
Sbjct: 14 gacggggggagta 2
>RF01058;MIR806;AL607006.4/105077-105318 4530:Oryza sativa (rice)
Length = 242
Score = 204 bits (103), Expect = 4e-52
Identities = 207/243 (85%), Gaps = 4/243 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatat-aagggattttaagtttttgcttgtaacgtttgaccca 62
||||||||||||| |||||||| |||||||||| |||||||||||| ||||||||||| |
Sbjct: 2 tactccctccgtcccataatattaagggattttgagtttttgcttgcaacgtttgacc-a 60
Query: 63 ctcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttatta 122
||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 61 ctcgtcttattcaaaattttttgaaattattatttattttatttgtgacttactttatta 120
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
|||| | ||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 121 tctacagtactttaagcacgactttttattttttatatttgcaaaaagaaattgaataag 180
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| |||||||||||||| || | ||||| ||||||| ||| ||||||||||| ||||||
Sbjct: 181 acgagtggtcaaacgttgcaagaaaaaactcaaaatccct--tattgtgggacggaggga 238
Query: 243 gta 245
|||
Sbjct: 239 gta 241
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/74 (89%), Gaps = 3/74 (4%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| || |||| ||||||||| ||||||| |||| ||||||||| |||
Sbjct: 242 gtactccctccgtcccacaata--agggattttgagttttttcttgcaacgtttga-cca 186
Query: 63 ctcgtcttattcaa 76
||||||||||||||
Sbjct: 185 ctcgtcttattcaa 172
Score = 67.9 bits (34), Expect = 6e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaatacctt-atattgtg 231
|||||||||||| |||||||||||||| || | ||||| ||||||| |||| ||||| ||
Sbjct: 75 tttgaataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttaatattatg 16
Query: 232 ggacagagggagta 245
|||| |||||||||
Sbjct: 15 ggacggagggagta 2
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 202 bits (102), Expect = 2e-51
Identities = 206/243 (84%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||| ||| |||||||||||||||||| |||||||| ||| | ||||||||| ||
Sbjct: 2 tactccctc-gtcccataatataagggattttgagtttttgtttgcagcgtttgacc-ac 59
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||| |||||||||||||||||||||||||| |
Sbjct: 60 tcgtcttattcaaatttttttgaaattattatttattttatttgtgacttactttattgt 119
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
||| | ||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 120 ctacagtactttaagcacaacttttcgttttttatatttgcaaaaaagatttgaataaga 179
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| |||||||||||||| || ||||| ||||||| ||||||||| |||||| |||||||
Sbjct: 180 cgagtggtcaaacgttgcaatcaaaaactcaaaatcccttatattttgggacggagggag 239
Query: 244 tag 246
|||
Sbjct: 240 tag 242
Score = 91.7 bits (46), Expect = 4e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| || ||||||||||||||| |||||||| ||| ||||||||| ||||
Sbjct: 241 tactccctccgtcccaaaatataagggattttgagtttttgattgcaacgtttga-ccac 183
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 182 tcgtcttattcaaa 169
Score = 58.0 bits (29), Expect = 6e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| |||||||||||| | || ||||| ||||||| ||||||||| |||
Sbjct: 73 tttgaataagacgagtggtcaaacgctgcaaacaaaaactcaaaatcccttatattatgg 14
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 13 gac-gagggagta 2
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa Indica
Group
Length = 244
Score = 202 bits (102), Expect = 2e-51
Identities = 206/243 (84%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||| ||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgtaatgtttgacc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaa-ttattaattattttatttgtgacttactttatta 122
|||||||||||||| ||| |||||| |||||||||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaatttttttaaaattattatttattttatttgtgacttactttatta 120
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
|||| | |||||||||||||| |||| |||||||||||||| |||||||||
Sbjct: 121 tctatagtactttaagcataattttttgttttttatatttgcaaaaaaaaattgaataag 180
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| | |||||||||||| || | ||||| ||||||| ||||||||| |||||| ||||||
Sbjct: 181 acgaatggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgggacggaggga 240
Query: 243 gta 245
|||
Sbjct: 241 gta 243
Score = 97.6 bits (49), Expect = 7e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||||| ||||||||| |||
Sbjct: 243 tactccctccgtcccataatataagggattttgagtttttgcttgcaacgtttga-ccat 185
Query: 64 tcgtcttattcaa 76
|||||||||||||
Sbjct: 184 tcgtcttattcaa 172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| ||||| | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacattacaagcaaaaactcaaaatcccttatattatgg 15
Query: 233 gacagagggagtag 246
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01062;MIR812;AAAA02000644.1/83237-83065 39946:Oryza sativa Indica
Group
Length = 173
Score = 200 bits (101), Expect = 7e-51
Identities = 153/174 (87%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 173 gtttttgcttgtaacgtttgacc-actcgtcttattcaaaattttttgaaattattaatt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 114 attttatttgtgacatactttattatctaaaatactttaagcataactttttatttttta 55
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaacgttacatgtaaaaaa 211
||||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct: 54 tatttgcaaaaaaaaattgaataagacgagtggtcaaatgttacatgtaaaaaa 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttaca 202
|||||||||||| |||||||||||||||||
Sbjct: 135 tttgaataagacgagtggtcaaacgttaca 164
>RF01058;MIR806;AAAA02030701.1/27339-27098 39946:Oryza sativa Indica
Group
Length = 242
Score = 198 bits (100), Expect = 3e-50
Identities = 205/242 (84%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttggaacgtttgacc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaagtttt-gaaattattcattattttatttgtgacttactttattat 119
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
||| | ||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct: 120 ctatagtactttaagcacaacttttcattttttatattcgcaaaaaaaaattgaataaga 179
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
|||||||||||||| || | | | | ||||| |||||||||||||||| |||||||
Sbjct: 180 tgagtggtcaaacgttgcaagcagtagcttaaaatcccttatattgtgggacggagggag 239
Query: 244 ta 245
||
Sbjct: 240 ta 241
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| |||||||||||||| || | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacgttccaagcaaaaactcaaaatcccttatattatgg 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| || |||||||||||||||||| | |||||| ||||||||| |||
Sbjct: 242 gtactccctccgtcccacaatataagggattttaagctactgcttgcaacgtttga-cca 184
Query: 63 ctcgtcttattcaa 76
||| ||||||||||
Sbjct: 183 ctcatcttattcaa 170
>RF01058;MIR806;AACV01007669.1/15429-15672 39947:Oryza sativa
Japonica Group
Length = 244
Score = 196 bits (99), Expect = 1e-49
Identities = 206/244 (84%), Gaps = 2/244 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||||| || |||||||| ||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgcaatgtttgacc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaaatttgaaattattatttattttatttgtgacttactttattat 120
Query: 124 ctaaaatactttaagcataacttttcattttttatattt-gcnnnnnnnntttgaataag 182
||| | || |||||||||||||||| |||||||||||| | ||||||||||
Sbjct: 121 ctacagtattttaagcataactttttgttttttatatttggagaaaaaaatttgaataag 180
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| |||||| ||| ||| || | ||||| ||||||| |||||||||||||||| || |||
Sbjct: 181 acgagtggttaaatgttgcaagcaaaaactcaaaatcccttatattgtgggacggaagga 240
Query: 243 gtag 246
||||
Sbjct: 241 gtag 244
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||||| |||||| || ||||||||||||||| |||||||||||| ||| ||| | ||||
Sbjct: 243 tactccttccgtcccacaatataagggattttgagtttttgcttgcaacattt-aaccac 185
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 184 tcgtcttattcaaa 171
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| || || | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacattgcaagcaaaaactcaaaatcccttatattatgg 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AC145127.1/405367-405608 39947:Oryza sativa Japonica
Group
Length = 242
Score = 194 bits (98), Expect = 4e-49
Identities = 203/242 (83%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttataacgtttgac--ac 59
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||| ||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 60 tcgttttattcaaatttttttgaaattattatttattttatttgtgacttactttattat 119
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
||| || |||||||| |||||||| |||||||||| || |||||||||||
Sbjct: 120 ctaccgtattttaagcacaacttttcgttttttatatctgtaaaaaatttttgaataaga 179
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| |||||||||||||| | | |||| ||||||| |||||||||||||||| |||||||
Sbjct: 180 cgagtggtcaaacgttgtaagcgaaaactcaaaatcccttatattgtgggacggagggag 239
Query: 244 ta 245
||
Sbjct: 240 ta 241
Score = 83.8 bits (42), Expect = 1e-15
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| || ||||||||||||||| |||||| |||| ||||||||| ||||
Sbjct: 241 tactccctccgtcccacaatataagggattttgagttttcgcttacaacgtttga-ccac 183
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 182 tcgtcttattcaaa 169
Score = 58.0 bits (29), Expect = 6e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
||||||||| || |||| |||||||||| | | ||||| ||||||| ||||||||| |||
Sbjct: 73 tttgaataaaacgagtg-tcaaacgttataagcaaaaactcaaaatcccttatattatgg 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AK064773.1/2875-3117 39947:Oryza sativa Japonica
Group
Length = 243
Score = 186 bits (94), Expect = 1e-46
Identities = 203/243 (83%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| ||||||||| |||||||| |||||||||||||||||||||| | |
Sbjct: 1 gtactccctccgtcccataatataggggattttgagtttttgcttgtaacgtttga-cta 59
Query: 63 ctcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttatta 122
||||||||||| || ||| ||||| |||||||||||||||||||||||||||
Sbjct: 60 ctcgtcttatttaattttttaaaaaaatattatttattttatttgtgacttactttatta 119
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
|| | | |||||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 120 tccacagtactttaagcgcaacttttcatttttgatatttgcaaaaaaattttgaataag 179
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| |||||||||||||| || | ||||| |||||| ||| |||||||||||| ||||||
Sbjct: 180 acgagtggtcaaacgttgcaagcaaaaactcaaaagccctcatattgtgggacggaggga 239
Query: 243 gta 245
|||
Sbjct: 240 gta 242
Score = 83.8 bits (42), Expect = 1e-15
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| || ||||| |||| |||| |||||||||||| ||||||||| ||||
Sbjct: 242 tactccctccgtcccacaatatgagggcttttgagtttttgcttgcaacgtttga-ccac 184
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 183 tcgtcttattcaaa 170
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 177 aataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggaca 236
|||||||| ||| ||||||||||||| | ||||| ||||||| || |||||| ||||||
Sbjct: 70 aataagacgagtagtcaaacgttacaagcaaaaactcaaaatcccctatattatgggacg 11
Query: 237 gagggagta 245
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AP002486.1/27565-27805 39947:Oryza sativa Japonica
Group
Length = 241
Score = 184 bits (93), Expect = 4e-46
Identities = 206/243 (84%), Gaps = 5/243 (2%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| || ||||||||||||||| ||||||| |||| |||||||||| ||
Sbjct: 2 tactccctccgtcccagaatataagggattttgagtttttacttgcaacgtttgact-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttattcaa--tattttgaaattattatttattttatttgtgacttactttattat 118
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| | | ||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 119 ccacagtactttaagcacaacttttcgttttttatatttgc-aaaaaaatttgaataaga 177
Query: 184 ctagtggtcaaacgttacatgtaaaaaatc-aaaataccttatattgtgggacagaggga 242
| ||||||||| ||||||| | ||||| || ||||| |||||||||||||||| ||||||
Sbjct: 178 cgagtggtcaagcgttacaagcaaaaactcaaaaatcccttatattgtgggacggaggga 237
Query: 243 gta 245
|||
Sbjct: 238 gta 240
Score = 85.7 bits (43), Expect = 3e-16
Identities = 69/75 (92%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataaggga-ttttaagtttttgcttgtaacgtttgaccca 62
||||||||||||| || ||||||||||| |||| ||||||||||||||||| |||| |||
Sbjct: 240 tactccctccgtcccacaatataagggatttttgagtttttgcttgtaacgcttga-cca 182
Query: 63 ctcgtcttattcaaa 77
|||||||||||||||
Sbjct: 181 ctcgtcttattcaaa 167
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 174 ttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtggg 233
||||||||||| ||| |||||||||| || ||||||| ||||||| ||||||||| ||||
Sbjct: 73 ttgaataagacgagtagtcaaacgttgcaagtaaaaactcaaaatcccttatattctggg 14
Query: 234 acagagggagta 245
|| |||||||||
Sbjct: 13 acggagggagta 2
>RF01058;MIR806;AACV01016618.1/3926-4166 39947:Oryza sativa Japonica
Group
Length = 241
Score = 184 bits (93), Expect = 4e-46
Identities = 202/241 (83%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 5 actccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccact 64
|||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| |||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttttgcttgcaacgtttgacc-act 61
Query: 65 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 124
||| |||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 62 cgttttattct--ttttttcgaaattattatttattttatttgtgacttactttattatc 119
Query: 125 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 184
|| ||||||||||||| | ||||| ||||||||||||| |||||||||||
Sbjct: 120 tataatactttaagcacacctttttgttttttatatttgtaaaaaaaaattgaataagac 179
Query: 185 tagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 244
|||||||||||||| || ||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 180 gagtggtcaaacgttgcaaacaaaaactcaaaatcccttatattgtgggacggagggagt 239
Query: 245 a 245
|
Sbjct: 240 a 240
Score = 91.7 bits (46), Expect = 4e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| || ||||||||||||||| |||||||| ||| ||||||||| |||
Sbjct: 241 gtactccctccgtcccacaatataagggattttgagtttttgtttgcaacgtttga-cca 183
Query: 63 ctcgtcttattcaa 76
||||||||||||||
Sbjct: 182 ctcgtcttattcaa 169
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 176 gaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggac 235
|||||| || |||||||||||||| || | ||||| ||||||| ||||||||| ||||||
Sbjct: 71 gaataaaacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgggac 12
Query: 236 agagggagt 244
||||||||
Sbjct: 11 ggagggagt 3
>RF01058;MIR806;AACV01004109.1/11153-11393 39947:Oryza sativa
Japonica Group
Length = 241
Score = 178 bits (90), Expect = 2e-44
Identities = 202/242 (83%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||||||||| || |||||||||||||||||| |||||||| ||| || |||||||| ||
Sbjct: 2 tactccctccatcccataatataagggattttgagtttttgtttgcaatgtttgacc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||| ||| ||||||||| |||||||||||| ||||||||||||||
Sbjct: 61 tcgtcttatttaaaattttttaaaattattatttattttatttg--acttactttattat 118
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
||| | ||||||||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 119 ctacattactttaagcacaacttttcgttttttatatttgcaaaaaaaaattgaataaga 178
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| |||||||||| ||| || | ||||| ||||||| |||||||||||||||| |||||||
Sbjct: 179 cgagtggtcaaatgttgcaagcaaaaactcaaaatcccttatattgtgggacggagggag 238
Query: 244 ta 245
||
Sbjct: 239 ta 240
Score = 89.7 bits (45), Expect = 2e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| || ||||||||||||||| |||||||||||| ||| ||||| ||||
Sbjct: 240 tactccctccgtcccacaatataagggattttgagtttttgcttgcaacatttga-ccac 182
Query: 64 tcgtcttattcaa 76
|||||||||||||
Sbjct: 181 tcgtcttattcaa 169
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 177 aataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggaca 236
|||||||| ||||||||||| || || ||||| ||||||| ||||||||| |||||
Sbjct: 70 aataagacgagtggtcaaacattgcaaacaaaaactcaaaatcccttatattatgggatg 11
Query: 237 gagggagta 245
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AAAA02030884.1/12329-12088 39946:Oryza sativa Indica
Group
Length = 242
Score = 176 bits (89), Expect = 1e-43
Identities = 202/242 (83%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| ||
Sbjct: 2 tactccctccgtctcataatataagggattttgagttttcgcttccaacgtttgacc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
||||||||||| || |||||||||| ||||||||||||||||||| ||||||||
Sbjct: 61 tcgtcttattcgaaaaattttgaaattattatttattttatttgtgacttagtttattat 120
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
||| | ||||||||||| ||||||| ||||||||||||| ||| |||||||
Sbjct: 121 ctacagtactttaagcacaactttttgttttttatatttgtaaaaaaattttaaataaga 180
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| |||||||||||||| | || |||| | ||||| || ||||||||||||| |||||||
Sbjct: 181 cgagtggtcaaacgttgtaagt-aaaacttaaaatcccctatattgtgggacggagggag 239
Query: 244 ta 245
||
Sbjct: 240 ta 241
Score = 60.0 bits (30), Expect = 2e-08
Identities = 62/70 (88%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| || |||||| ||||||||||| |||| ||| ||||||||| ||||
Sbjct: 241 tactccctccgtcccacaatataggggattttaag-ttttacttacaacgtttga-ccac 184
Query: 64 tcgtcttatt 73
||||||||||
Sbjct: 183 tcgtcttatt 174
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 176 gaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggac 235
||||||||| |||||||||||||| | | |||| ||||||| ||||||||| || |||
Sbjct: 71 gaataagacgagtggtcaaacgttggaagcgaaaactcaaaatcccttatattatgagac 12
Query: 236 agagggagta 245
|||||||||
Sbjct: 11 ggagggagta 2
>RF01058;MIR806;AP008214.1/3500621-3500380 39947:Oryza sativa
Japonica Group
Length = 242
Score = 176 bits (89), Expect = 1e-43
Identities = 202/242 (83%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||||| | |||||| | ||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgcacggtttga-ctac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| | |||||||| ||| ||| ||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaattttggaattattatttacttt-tttgtgacttactttattat 119
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| ||||||||||| ||| ||||||| |||||||||||||| |||||||||||
Sbjct: 120 ccaaaatactttacgcacaactttttgttttttatatttgcataaattttttgaataaga 179
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| ||||||||||| |||| | ||||| ||||||| ||||||||| |||||| |||||||
Sbjct: 180 cgagtggtcaaacactacaagcaaaaactcaaaatcccttatattatgggacggagggag 239
Query: 244 ta 245
||
Sbjct: 240 ta 241
Score = 99.6 bits (50), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||
Sbjct: 241 tactccctccgtcccataatataagggattttgagtttttgcttgtagtgtttga-ccac 183
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 182 tcgtcttattcaaa 169
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||| ||||||| | || | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtagtcaaaccgtgcaagcaaaaactcaaaatcccttatattatgg 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa Indica
Group
Length = 244
Score = 172 bits (87), Expect = 2e-42
Identities = 203/244 (83%), Gaps = 2/244 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| | |||||||||| | ||| |||| |
Sbjct: 2 tactccctccgtcccataatataagggattttgattttttgcttgcactgttcgacc-at 60
Query: 64 tcgtcttattcaaannnnnnnga-aattattaattattttatttgtgacttactttatta 122
|||||||||||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaaaatttagaattattatttattttatttgtgacttactttatta 120
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
| |||| ||||||||||| ||||||| ||||||||||||||| ||||||||||
Sbjct: 121 tttaaagtactttaagcacaactttttattttttatatttgcacaatttttttgaataag 180
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| |||||||||| | |||| ||||||||||||| |||||||| |||||| ||||||
Sbjct: 181 acgagtggtcaaatggtacaaacaaaaaatcaaaatctcttatattatgggacggaggga 240
Query: 243 gtag 246
||||
Sbjct: 241 gtag 244
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| ||||||||||| |||||| | |||||| ||||| | ||||| ||||
Sbjct: 243 tactccctccgtcccataatataagagattttgattttttgtttgtaccatttga-ccac 185
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 184 tcgtcttattcaaa 171
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| | ||||| ||| | || | ||||||||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgaatggtcgaacagtgcaagcaaaaaatcaaaatcccttatattatgg 15
Query: 233 gacagagggagtag 246
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01058;MIR806;AAAA02000569.1/44638-44880 39946:Oryza sativa Indica
Group
Length = 243
Score = 168 bits (85), Expect = 2e-41
Identities = 200/242 (82%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| || |||||||| |||||| |||||||||||| ||||||||||| ||
Sbjct: 2 tactccctccgtcccacaatataagagattttgagtttttgcttgcaacgtttgacc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
||| |||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 tcggcttattcaaaaatttttgaaattattatttattttatttgtgacttactttattat 120
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| | ||||||||| | |||||||| |||||||||||||| ||| ||||||
Sbjct: 121 tcacagtactttaagtacaacttttcgttttttatatttgcaaaaaaaaattgtataaga 180
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| ||||||||||| || | | ||||| ||||||| |||| ||||||||||| |||||||
Sbjct: 181 cgagtggtcaaacattgtacgcaaaaactcaaaatcccttgtattgtgggacggagggag 240
Query: 244 ta 245
||
Sbjct: 241 ta 242
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||| | |||||||||||||| || | ||||| ||||||| ||||||||||||
Sbjct: 74 tttgaataagccgagtggtcaaacgttgcaagcaaaaactcaaaatctcttatattgtgg 15
Query: 233 gacagagggagtag 246
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| || |||| |||||||||| ||||||||| | || |||||| |||
Sbjct: 243 gtactccctccgtcccacaatacaagggattttgagtttttgcgtacaatgtttga-cca 185
Query: 63 ctcgtcttat 72
||||||||||
Sbjct: 184 ctcgtcttat 175
>RF01058;MIR806;AP003298.3/13500-13742 39947:Oryza sativa Japonica
Group
Length = 243
Score = 168 bits (85), Expect = 2e-41
Identities = 200/242 (82%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||||||||||||| |||||||||||||||||||||||||||||| || |||||| ||||
Sbjct: 2 tactccctccgtcttataatataagggattttaagtttttgcttgcaatgtttga-ccac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 61 tcgtcttattcaaaaatttttgaaattattatttattttatttatgatttactttattat 120
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| | ||||||||||| ||||||| |||||||||||| |||||||||||
Sbjct: 121 ccgcagtactttaagcacaactttttgctttttatatttgtaaaaaaaatttgaataaga 180
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| |||| |||||||||||| | ||||| | ||||| ||||||||| | ||| |||||||
Sbjct: 181 cgagtgttcaaacgttacaagcaaaaacttaaaatcccttatattataagacggagggag 240
Query: 244 ta 245
||
Sbjct: 241 ta 242
Score = 117 bits (59), Expect = 8e-26
Identities = 72/75 (96%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 243 gtactccctccgtcttataatataagggattttaagtttttgcttgtaacgtttga-aca 185
Query: 63 ctcgtcttattcaaa 77
|||||||||||||||
Sbjct: 184 ctcgtcttattcaaa 170
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| || || | ||||| | ||||| ||||||||| |
Sbjct: 74 tttgaataagacgagtggtcaaacattgcaagcaaaaacttaaaatcccttatattataa 15
Query: 233 gacagagggagtag 246
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01058;MIR806;AAAA02007190.1/17283-17525 39946:Oryza sativa Indica
Group
Length = 243
Score = 168 bits (85), Expect = 2e-41
Identities = 200/242 (82%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| | |||||||||||||||| | ||||||||| | |||||||| |
Sbjct: 2 tactccctccgtcccttaatataagggattttgacattttgcttgcactgtttgacc-at 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaatatatttgaaattattatttattttatttgtgacttactttattat 120
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
||| ||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 121 tcaaagtactttaagcacaacttttctttttttatatttgcacaaattttttgaataaga 180
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| ||||||||||| |||| | |||| ||||||| ||||||||| ||||| |||||||
Sbjct: 181 cgagtggtcaaacagtacaagcaaaatgtcaaaatcccttatattaggggaccgagggag 240
Query: 244 ta 245
||
Sbjct: 241 ta 242
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||| ||| | |||||||||||||||| | ||||||||||| |||||| |||
Sbjct: 243 gtactccctcggtcccctaatataagggattttgacattttgcttgtactgtttga-cca 185
Query: 63 ctcgtcttattcaaa 77
|||||||||||||||
Sbjct: 184 ctcgtcttattcaaa 170
>RF01058;MIR806;AP008213.1/28335111-28335353 39947:Oryza sativa
Japonica Group
Length = 243
Score = 165 bits (83), Expect = 4e-40
Identities = 192/232 (82%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||| |
Sbjct: 1 gtactccctccgtctaataatataagggattttgagtttttgcttatactgtttgacc-a 59
Query: 63 ctcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttatta 122
||||||||||||||| |||||||| ||||| | |||||||||||||||||||
Sbjct: 60 ctcgtcttattcaaaaaaatttagaattattatttattgtttttgtgacttactttatta 119
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
|| ||| ||||||||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 120 tccaaagtactttaagcacaacttttcgttttttatatttgcacaaattttttgaataag 179
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtggga 234
|| ||||||||||| | || ||||| ||||||| ||||||||| |||||
Sbjct: 180 acgagtggtcaaacagtgcaaacaaaaactcaaaattccttatattatggga 231
Score = 60.0 bits (30), Expect = 2e-08
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||| ||||| || |||||||||||| ||||| |||||||| ||| | |||||| ||||
Sbjct: 242 tacttcctccatcccataatataaggaattttgagtttttgtttgcactgtttga-ccac 184
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 183 tcgtcttattcaaa 170
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| || | | ||||| ||||||| ||||||||| |
Sbjct: 74 tttgaataagacgagtggtcaaacagtataagcaaaaactcaaaatcccttatattatta 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AAAA02015956.1/1-242 39946:Oryza sativa Indica Group
Length = 242
Score = 163 bits (82), Expect = 1e-39
Identities = 201/243 (82%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||| ||| |||||| ||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgctagtagtgtttga-ccac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
| ||||||||||| |||||||||| ||| ||| |||||||||| |||||||||
Sbjct: 61 ttatcttattcaaaaaattttgaaattattatttacttt-tttgtgacttgctttattat 119
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| || ||||||| ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 120 cccaagtactttacgcacaacttttcattttttatatttgcataaattttttgaataaga 179
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| ||||||||||| || | ||||||| ||||||| | ||||||| |||||| |||||||
Sbjct: 180 cgagtggtcaaacactataagtaaaaactcaaaatcctttatattatgggacggagggag 239
Query: 244 tag 246
|||
Sbjct: 240 tag 242
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||| ||||||| ||||||| ||| || |||||| ||||
Sbjct: 241 tactccctccgtcccataatataaaggattttgagtttttacttatagtgtttga-ccac 183
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 182 tcgtcttattcaaa 169
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
||||||||||| ||||||||||| ||| | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagataagtggtcaaacactactagcaaaaactcaaaatcccttatattatgg 15
Query: 233 gacagagggagtag 246
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01058;MIR806;AP003960.2/91001-90759 39947:Oryza sativa Japonica
Group
Length = 243
Score = 157 bits (79), Expect = 9e-38
Identities = 197/240 (82%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||||||||||| |||||||||||||||||||| ||||||||| | |||||||| |
Sbjct: 2 tactccctccgttccataatataagggattttaactttttgcttacactgtttgacc-at 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaaaattgaaattattatttattttatttgtgacttactttattat 120
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| ||| ||||||||||| ||| ||| |||||||||||| | |||||||||||
Sbjct: 121 ccaaagtactttaagcacaaccttttgttttttatatttacacaatttttttgaataaga 180
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| ||||||||||| | || ||||||| | ||||| ||||||||| ||| || |||||||
Sbjct: 181 ccagtggtcaaacagtgcaagtaaaaagttaaaatcccttatattatggaacggagggag 240
Score = 63.9 bits (32), Expect = 1e-09
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 6 ctccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccactc 65
|||||||||| |||||||||||||||||||| ||||| |||| | |||||| |||||
Sbjct: 240 ctccctccgttccataatataagggattttaactttttacttgcactgtttga-ccactg 182
Query: 66 gtcttattcaaa 77
||||||||||||
Sbjct: 181 gtcttattcaaa 170
>RF01062;MIR812;AP005913.3/63117-62944 39947:Oryza sativa Japonica
Group
Length = 174
Score = 153 bits (77), Expect = 1e-36
Identities = 148/174 (85%), Gaps = 2/174 (1%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 174 gtttttgctcgtaacgtttaacc-actcgtcttattcaaatttttttgaaattattaatt 116
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||||
Sbjct: 115 attttatttgtgacttactttattatctacagtactttaagcacaacttttcgtttttta 56
Query: 158 tatttgc-nnnnnnnntttgaataagactagtggtcaaacgttacatgtaaaaa 210
||||||| |||||||||||| |||||||||||||| || |||||||
Sbjct: 55 tatttgcaaaaaaaattttgaataagacgagtggtcaaacgttgcaagtaaaaa 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
|||||| |||| ||||||||||| ||||||||||||||||
Sbjct: 1 gtttttacttgcaacgtttgacc-actcgtcttattcaaa 39
>RF01058;MIR806;AP004797.3/60701-60942 39947:Oryza sativa Japonica
Group
Length = 242
Score = 153 bits (77), Expect = 1e-36
Identities = 199/242 (82%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| ||||||||||| | ||||| |||
Sbjct: 2 tactccctccgtcccataatataagggattttgtgtttttgcttgcactctttga-tcac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||| ||||||| |||||||||| ||||||||
Sbjct: 61 tcgtcttattcaaaaaattttgaaattattatttatttt-tttgtgacttgttttattat 119
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 120 ccaaagtactttaagcacaacttttcattttttatatttgcataatttttttgaataaga 179
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
|||| ||||| |||| | ||||| ||||||| ||||||||| |||||| |||||||
Sbjct: 180 tgagtgatcaaatagtacaagcaaaaactcaaaatcccttatattatgggacggagggag 239
Query: 244 ta 245
||
Sbjct: 240 ta 241
Score = 77.8 bits (39), Expect = 7e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgta 50
||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 241 tactccctccgtcccataatataagggattttgagtttttgcttgta 195
>RF01058;MIR806;AAAA02017486.1/15213-14973 39946:Oryza sativa Indica
Group
Length = 241
Score = 151 bits (76), Expect = 6e-36
Identities = 139/161 (86%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| ||| ||||||| |||||| ||||||| |||| | |||||||| ||
Sbjct: 2 tactccctccgtcccatgatataagagattttgagttttttcttgcactgtttgacc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||| ||||||| || |||||||||||||||||
Sbjct: 61 tcgtcttattcaaaacattttgaaattattatttatttttttcgtgacttactttattat 120
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgc 164
| ||||||||||||||| |||||||| ||||||||||||||
Sbjct: 121 ccaaaatactttaagcacaacttttcgttttttatatttgc 161
Score = 60.0 bits (30), Expect = 2e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||||||||| || ||||||||||| |||||| |||||||||||| | |||||| ||||
Sbjct: 240 tactccctccatcccataatataagagattttgagtttttgcttgcactgtttga-ccac 182
Query: 64 tcgtct 69
||||||
Sbjct: 181 tcgtct 176
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| | || | ||||| ||||||| ||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacagtgcaagaaaaaactcaaaatctcttatatcatgg 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AP008214.1/20963120-20962878 39947:Oryza sativa
Japonica Group
Length = 243
Score = 147 bits (74), Expect = 9e-35
Identities = 192/235 (81%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 11 tccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccactcgtctt 70
|||||| |||||||||||||||||| | ||||| ||| | |||||||| | |||||||
Sbjct: 9 tccgtcccataatataagggattttgactttttatttgcactgtttgacc-attcgtctt 67
Query: 71 attcaaannnnnnngaaattattaattattttatttgtgacttactttattatctaaaat 130
||||||| |||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 68 attcaaaaaaaattagaattattatttattttatttgtgacttactttattatctatcgt 127
Query: 131 actttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagactagtgg 190
|||||||||| ||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 128 actttaagcacaacttttcattttttatatttgcacaaattttttgaataagacgagtgg 187
Query: 191 tcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagta 245
|||||| | || | ||||| ||||||| ||||||||| |||||| || ||||||
Sbjct: 188 tcaaacagtgcaagcaaaaagtcaaaatcccttatattatgggacggatggagta 242
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||||| |||||| |||||||||||||||||| | |||||||||| | |||||| ||||
Sbjct: 242 tactccatccgtcccataatataagggattttgactttttgcttgcactgtttga-ccac 184
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 183 tcgtcttattcaaa 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| | ||||||||| | || |||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgaatggtcaaacagtgcaaataaaaagtcaaaatcccttatattatgg 15
Query: 233 gac 235
|||
Sbjct: 14 gac 12
>RF01062;MIR812;AAAA02006808.1/23504-23678 39946:Oryza sativa Indica
Group
Length = 175
Score = 145 bits (73), Expect = 3e-34
Identities = 106/118 (89%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatta 98
|||||||||||||||||||||| |||||||||||||||| |||||||||| |||
Sbjct: 174 tttttgcttgtaacgtttgacc-actcgtcttattcaaaattttttgaaattattattta 116
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttt 156
|||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||
Sbjct: 115 ttttatttgtgacttactttattatctacaatactttaagtacaacttttcatttttt 58
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttaca 202
|||||||||||| |||||||||||||||||
Sbjct: 137 tttgaataagacgagtggtcaaacgttaca 166
>RF01062;MIR812;AP008208.1/3789206-3789378 39947:Oryza sativa
Japonica Group
Length = 173
Score = 145 bits (73), Expect = 3e-34
Identities = 137/162 (84%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| ||||||||||| | |||||||||||||| |||||||||||||
Sbjct: 173 gtttttgcttgcaacgtttgacc-attcgtcttattcaaaaaattttgaaattattaatt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||
Sbjct: 114 attttatttgtgacttactttattatctacagtactttaagcacaactttttgtttttta 55
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaacgtt 199
||||||| ||||||||||| ||||||||||||||
Sbjct: 54 tatttgcaaaaaaaaattgaataagacgagtggtcaaacgtt 13
Score = 54.0 bits (27), Expect = 1e-06
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaa 76
||||||||||| ||||||||| |||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttga-ccactcgtcttattcaa 38
>RF01062;MIR812;AAAA02021140.1/3763-3594 39946:Oryza sativa Indica
Group
Length = 170
Score = 143 bits (72), Expect = 1e-33
Identities = 111/125 (88%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||
Sbjct: 170 gtttttgcttgcaacgtttgacc-actcatcttattcaaaaaattctgaaattattaatt 112
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||||
Sbjct: 111 attttatttgtgacttactttattatctacagtactttaagcacaacttttcgtttttta 52
Query: 158 tattt 162
|||||
Sbjct: 51 tattt 47
>RF01058;MIR806;AP004560.3/95898-95658 39947:Oryza sativa Japonica
Group
Length = 241
Score = 143 bits (72), Expect = 1e-33
Identities = 201/244 (82%), Gaps = 5/244 (2%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||||||| |||||||||||||| |||||||| ||| | |||||| |||
Sbjct: 1 gtactccctccgtctcatgatataagggattttgagtttttgtttgcactgtttga-cca 59
Query: 63 ctcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttatta 122
||||||||||||||| | |||||||| |||| | |||||||||||||||||||
Sbjct: 60 ctcgtcttattcaaaaaattttggaattatta--tattat-tttgtgacttactttatta 116
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgc-nnnnnnnntttgaataa 181
|| ||| ||||||||||| || ||||| |||||||||||||| |||||||||
Sbjct: 117 tccaaagtactttaagcacaatttttcgttttttatatttgcacaaatttttttgaataa 176
Query: 182 gactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggg 241
||| ||||||||||| || | ||||||| | ||||| ||||||||| |||||| |||||
Sbjct: 177 gacgagtggtcaaacagtataagtaaaaacttaaaatcccttatattatgggacggaggg 236
Query: 242 agta 245
||||
Sbjct: 237 agta 240
Score = 91.7 bits (46), Expect = 4e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||||||||||| ||| || |||||| ||||
Sbjct: 240 tactccctccgtcccataatataagggattttaagtttttacttatactgtttga-ccac 182
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 181 tcgtcttattcaaa 168
>RF01058;MIR806;AACV01022700.1/19974-19734 39947:Oryza sativa
Japonica Group
Length = 241
Score = 141 bits (71), Expect = 5e-33
Identities = 198/243 (81%), Gaps = 3/243 (1%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
||||||| |||||| |||||||||||||||||| | |||||||||| |||||||| |
Sbjct: 1 gtactccttccgtcccataatataagggattttgaatttttgcttgcgttgtttgacc-a 59
Query: 63 ctcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttatta 122
||||||||||| ||| |||||||||| ||||||| |||| |||||||||||||
Sbjct: 60 ctcgtcttatttaaaaaaatttgaaattattatttattttttttg--acttactttatta 117
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
|| ||| |||||||||||||||||||| |||||||||||||| ||| ||||||
Sbjct: 118 tccaaagtactttaagcataacttttcgttttttatatttgcacaaattttttaaataag 177
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| |||| |||||| | || | ||||| ||||||| ||||||||| ||||| ||||||
Sbjct: 178 acgagtgatcaaaccgtgcaagcaaaaactcaaaatcccttatattatgggatggaggga 237
Query: 243 gta 245
|||
Sbjct: 238 gta 240
Score = 69.9 bits (35), Expect = 2e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
||||||||||| || |||||||||||||||||| |||||||||||| | |||||| ||
Sbjct: 241 gtactccctccatcccataatataagggattttgagtttttgcttgcacggtttga-tca 183
Query: 63 ctcgtcttatt 73
|||||||||||
Sbjct: 182 ctcgtcttatt 172
>RF01058;MIR806;AC133008.3/78480-78237 39947:Oryza sativa Japonica
Group
Length = 244
Score = 141 bits (71), Expect = 5e-33
Identities = 201/244 (82%), Gaps = 4/244 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgtattgtttga-ccac 60
Query: 64 tcgtcttattcaaannnnnnnga-aattattaattattttatttgtgacttactttatta 122
|||||||||||||| | |||||||| ||||||| ||||||| |||||||||||
Sbjct: 61 tcgtcttattcaaaaaaattttagaattattatttatttt-tttgtgatttactttatta 119
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgc-nnnnnnnntttgaataa 181
|| ||| || |||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 120 tccaaagtattttaagcacaacttttcgttttttatatttgcacaaatttttttgaataa 179
Query: 182 gactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggg 241
||| ||||||||||| | | ||||| ||||||| ||||||||| |||||| |||||
Sbjct: 180 gacgagtggtcaaacaatctaaacaaaaactcaaaatcccttatattatgggacggaggg 239
Query: 242 agta 245
||||
Sbjct: 240 agta 243
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| |||||||||||||||||| |||||||| || | |||||| |||
Sbjct: 244 gtactccctccgtcccataatataagggattttgagtttttgtttagattgtttga-cca 186
Query: 63 ctcgtcttattcaaa 77
|||||||||||||||
Sbjct: 185 ctcgtcttattcaaa 171
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| |||| | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacaatacaagcaaaaactcaaaatcccttatattatgg 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01062;MIR812;AAAA02030701.1/27133-27304 39946:Oryza sativa Indica
Group
Length = 172
Score = 139 bits (70), Expect = 2e-32
Identities = 111/124 (89%), Gaps = 2/124 (1%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||
Sbjct: 172 gtttttgcttggaacgtttgacc-actcgtcttattcaaaagtttt-gaaattattcatt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 114 attttatttgtgacttactttattatctatagtactttaagcacaacttttcatttttta 55
Query: 158 tatt 161
||||
Sbjct: 54 tatt 51
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgtt 199
|||||||||||| ||||||||||||||
Sbjct: 134 tttgaataagacgagtggtcaaacgtt 160
>RF01062;MIR812;AC104429.2/4630-4801 39947:Oryza sativa Japonica
Group
Length = 172
Score = 139 bits (70), Expect = 2e-32
Identities = 112/127 (88%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| |||||||||||| ||| |||||||||||||||| |||||||||| ||
Sbjct: 172 gtttttacttgtaacgtttaacc-actcgtcttattcaaaattttttgaaattattattt 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | ||||||||||| || |||||||||||||
Sbjct: 113 attttatttgtgacttactttattatctacagtactttaagcacaagttttcatttttta 54
Query: 158 tatttgc 164
|||||||
Sbjct: 53 tatttgc 47
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaa 210
|||||||||||| |||||| |||||||||| |||||||
Sbjct: 134 tttgaataagacgagtggttaaacgttacaagtaaaaa 171
>RF01062;MIR812;AAAA02030638.1/19667-19840 39946:Oryza sativa Indica
Group
Length = 174
Score = 139 bits (70), Expect = 2e-32
Identities = 112/127 (88%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| ||||||||| | ||||||||||||||| |||||||||||||
Sbjct: 174 gtttttgcttgcaacgtttgatc-actcgtcttattcaattttttttgaaattattaatt 116
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||| ||||||| | ||||||||||| ||||||||||||||||
Sbjct: 115 attttatttgtgacttacttttttatctacagtactttaagcacaacttttcatttttta 56
Query: 158 tatttgc 164
|||||||
Sbjct: 55 tatttgc 49
>RF01062;MIR812;AACV01005799.1/13497-13667 39947:Oryza sativa
Japonica Group
Length = 171
Score = 137 bits (69), Expect = 8e-32
Identities = 111/126 (88%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| |||||||||||||||| |||||||||||||||| ||||||||| ||
Sbjct: 171 gtttttacttgtaacgtttgacc-actcgtcttattcaaattattttaaaattattattt 113
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|| |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 112 atcttatttgtgacttactttattatctacaatactttaagcacaacttttcgtttttta 53
Query: 158 tatttg 163
||||||
Sbjct: 52 tatttg 47
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaa 210
|||||||||||| ||||||||||||||||| |||||||
Sbjct: 133 tttgaataagacgagtggtcaaacgttacaagtaaaaa 170
>RF01062;MIR812;AP008210.1/2457757-2457587 39947:Oryza sativa
Japonica Group
Length = 171
Score = 137 bits (69), Expect = 8e-32
Identities = 145/173 (83%), Gaps = 3/173 (1%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| ||||||||| | ||||||||||||||| ||||||||||||
Sbjct: 171 gtttttgcttgcaacgtttgatc-actcgtcttattcaattttttaaaaaattattaatt 113
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||||||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||
Sbjct: 112 attttattcatgacttactttattatctataataatttaagcataatttttcatttttta 53
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaacgttacatgtaaaaa 210
||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 52 tattt--aaagaaaatttgaataagactagtggtcaaacgttacaagtaaaaa 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
|||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 1 gtttttacttgtaacgtttga-ccactagtcttattcaaa 39
>RF01058;MIR806;AP008211.1/8180562-8180322 39947:Oryza sativa
Japonica Group
Length = 241
Score = 137 bits (69), Expect = 8e-32
Identities = 196/241 (81%), Gaps = 3/241 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||| ||| | |||||| ||||
Sbjct: 240 tactccctccgtcccataatataagggattttgagtttttgtttgcactgtttga-ccac 182
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| | |||||||| | |||| ||||||||||||||||||||
Sbjct: 181 tcgtcttattcaaaaatttttggaattatta--ttttttttttgtgacttactttattat 124
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| ||| ||||||||||| ||||| || ||||||||||||| |||||||||||
Sbjct: 123 ccaaagtactttaagcacaacttgtcgttttttatatttgtacaatttttttgaataaga 64
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| |||||||||| | || ||||| ||||||| ||||||||| |||||| |||||||
Sbjct: 63 cgagtggtcaaatagtgcaaacaaaaactcaaaatcccttatattatgggacggagggag 4
Query: 244 t 244
|
Sbjct: 3 t 3
Score = 73.8 bits (37), Expect = 1e-12
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 5 actccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccact 64
|||||||||||| |||||||||||||||||| |||||||| ||| | ||||| |||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttttgtttgcactatttga-ccact 61
Query: 65 cgtcttattcaaa 77
|||||||||||||
Sbjct: 62 cgtcttattcaaa 74
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| | || ||||| ||||||| ||||||||| |||
Sbjct: 168 tttgaataagacgagtggtcaaacagtgcaaacaaaaactcaaaatcccttatattatgg 227
Query: 233 gacagagggagtag 246
||| ||||||||||
Sbjct: 228 gacggagggagtag 241
>RF01058;MIR806;AAAA02022366.1/8512-8275 39946:Oryza sativa Indica
Group
Length = 238
Score = 137 bits (69), Expect = 8e-32
Identities = 196/242 (80%), Gaps = 6/242 (2%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||| ||| || ||||||||||||||| |||||||||||||| |||||| ||||
Sbjct: 2 tactccctctgtcccacaatataagggattttgagtttttgcttgtagtgtttga-ccac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||| ||| |||||||||| ||| ||| ||||||||||||||||
Sbjct: 61 tcgtcttatttaaaaaattttgaaattatta-----tttttttttgacttactttattat 115
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| ||| | ||||||||| || ||||| ||||||||||||| |||||||||||
Sbjct: 116 caaaagtgctttaagcacaatttttcgttttttatatttgtataaattttttgaataaga 175
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| ||||||||||| |||| ||||||| |||||| ||||||||| ||||| ||||||||
Sbjct: 176 caagtggtcaaacactacaagtaaaaacccaaaatcccttatattatgggaaagagggag 235
Query: 244 ta 245
||
Sbjct: 236 ta 237
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 177 aataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggaca 236
|||||||| ||||||||||| |||| | ||||| ||||||| |||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacactacaagcaaaaactcaaaatcccttatattgtgggaca 11
Query: 237 gagggagta 245
|||||||||
Sbjct: 10 gagggagta 2
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||| || |||||||||||||||||| |||||| |||||| |||||| |||
Sbjct: 238 gtactccctctttcccataatataagggattttgggtttttacttgtagtgtttga-cca 180
Query: 63 ctcgtcttattcaaa 77
|| ||||||||||||
Sbjct: 179 cttgtcttattcaaa 165
>RF01062;MIR812;AP002538.2/42335-42164 39947:Oryza sativa Japonica
Group
Length = 172
Score = 135 bits (68), Expect = 3e-31
Identities = 110/125 (88%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| ||||||||||| ||||||||||||||| |||||||||| ||
Sbjct: 172 gtttttgcttgcaacgtttgacc-actcgtcttattcaattttttttgaaattattattt 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||| ||||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 113 attttatttgtgacttattttattatctacaatactttaagcacaacttttcgtttttta 54
Query: 158 tattt 162
|||||
Sbjct: 53 tattt 49
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 174 ttgaataagactagtggtcaaacgtt 199
||||||||||| ||||||||||||||
Sbjct: 135 ttgaataagacgagtggtcaaacgtt 160
>RF01062;MIR812;AACV01010959.1/9597-9425 39947:Oryza sativa Japonica
Group
Length = 173
Score = 135 bits (68), Expect = 3e-31
Identities = 108/124 (87%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 125 aattattatttattttatttgtgacttactttattatctacagtactttaagcataactt 66
Query: 147 ttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgttacatgta 206
||| |||||||||||||| ||| |||||||| |||||||||||||| || |||
Sbjct: 65 ttcgttttttatatttgcgaaaaaattttaaataagacgagtggtcaaacgttgcaagta 6
Query: 207 aaaa 210
||||
Sbjct: 5 aaaa 2
>RF01062;MIR812;AP008213.1/28888545-28888717 39947:Oryza sativa
Japonica Group
Length = 173
Score = 135 bits (68), Expect = 3e-31
Identities = 138/165 (83%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| ||| |||||||||||| |||||||||||||||| |||||||||| ||
Sbjct: 173 gttttttcttataacgtttgacc-actcgtcttattcaaaaaattttgaaattattattt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||
Sbjct: 114 attttatttgtgacttactttattatctatgttactttaagcccaacttttcgtttttta 55
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaacgttaca 202
||||||| |||||||||||| | |||||||||||||||
Sbjct: 54 tatttgcaaaataaatttgaataagacgaatggtcaaacgttaca 10
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttga-ccattcgtcttattcaaa 39
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgtta 200
|||||||||||| |||||||||||||||
Sbjct: 135 tttgaataagacgagtggtcaaacgtta 162
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 133 bits (67), Expect = 1e-30
Identities = 199/243 (81%), Gaps = 7/243 (2%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| ||||||||||| |||||| ||||||| |||||| |||||| ||||
Sbjct: 238 tactccctccgtcccataatataagagattttgagtttttccttgtactgtttga-ccac 180
Query: 64 tcgtcttattcaaannnnnnngaaat-tattaattattttatttgtgacttactttatta 122
|||||||||||||| |||| | | | |||||| || |||||||||||||||
Sbjct: 179 tcgtcttattcaaaaaaaa---aaatggaattactattttgtt--tgacttactttatta 125
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
|||||| ||| ||||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 124 tctaaagtacattaagcacaacttttcgttttttatatttgcacaaattttttgaataag 65
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| ||||||||||| |||| | ||||| ||||||| ||||||||| |||||| ||||||
Sbjct: 64 acgagtggtcaaacagtacaagcaaaaactcaaaatcccttatattatgggacggaggga 5
Query: 243 gta 245
|||
Sbjct: 4 gta 2
Score = 99.6 bits (50), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgtactgtttga-ccac 60
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 61 tcgtcttattcaaa 74
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| |||| | ||||| ||||||| |||||||| |||
Sbjct: 166 tttgaataagacgagtggtcaaacagtacaaggaaaaactcaaaatctcttatattatgg 225
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 226 gacggagggagta 238
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa Japonica
Group
Length = 239
Score = 133 bits (67), Expect = 1e-30
Identities = 199/243 (81%), Gaps = 7/243 (2%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| ||||||||||| |||||| ||||||| |||||| |||||| ||||
Sbjct: 2 tactccctccgtcccataatataagagattttgagtttttccttgtactgtttga-ccac 60
Query: 64 tcgtcttattcaaannnnnnngaaat-tattaattattttatttgtgacttactttatta 122
|||||||||||||| |||| | | | |||||| || |||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaaaa---aaatggaattactattttgtt--tgacttactttatta 115
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
|||||| ||| ||||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 116 tctaaagtacattaagcacaacttttcgttttttatatttgcacaaattttttgaataag 175
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| ||||||||||| |||| | ||||| ||||||| ||||||||| |||||| ||||||
Sbjct: 176 acgagtggtcaaacagtacaagcaaaaactcaaaatcccttatattatgggacggaggga 235
Query: 243 gta 245
|||
Sbjct: 236 gta 238
Score = 99.6 bits (50), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||
Sbjct: 238 tactccctccgtcccataatataagggattttgagtttttgcttgtactgtttga-ccac 180
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 179 tcgtcttattcaaa 166
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| |||| | ||||| ||||||| |||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacagtacaaggaaaaactcaaaatctcttatattatgg 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AP008210.1/18547508-18547751 39947:Oryza sativa
Japonica Group
Length = 244
Score = 133 bits (67), Expect = 1e-30
Identities = 198/244 (81%), Gaps = 2/244 (0%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| | |||||||||||||||| | |||| ||| || |||||||| |
Sbjct: 1 gtactccctccgtcccctaatataagggattttgatattttacttatactgtttgacc-a 59
Query: 63 ctcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttatta 122
|||||||||||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 60 ttcgtcttattcaaaaaaatttggaattattatttattttatttgtgacttactttatta 119
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
|| ||| ||| |||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 120 tccaaagtaccttaagcgcaacttttcgttttttatatttgcacaaattttttgaataag 179
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatatt-gtgggacagaggg 241
|| ||||||||||| | || | |||| |||||||| |||| |||| | ||||| |||||
Sbjct: 180 acgagtggtcaaacagtgcaagcaaaatatcaaaatcccttttattggggggacggaggg 239
Query: 242 agta 245
||||
Sbjct: 240 agta 243
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| | ||||||||| || | |||||| |||||||| ||||||||| ||
Sbjct: 74 tttgaataagacgaatggtcaaacagtataagtaaaatatcaaaatcccttatattaggg 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AAAA02007696.1/5047-4813 39946:Oryza sativa Indica
Group
Length = 235
Score = 133 bits (67), Expect = 1e-30
Identities = 125/144 (86%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| | |||||||||| | |||||| ||||
Sbjct: 2 tactccctccgtcccataatataagggattttgactttttgcttgcactgtttga-ccac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||||| ||||||||||||||| ||||||||||||
Sbjct: 61 tcgtcttattcaaaaaattttgaaattattatttattttatttgtgaattactttattat 120
Query: 124 ctaaaatactttaagcataacttt 147
| ||| ||||||||||| ||||||
Sbjct: 121 c-aaagtactttaagcacaacttt 143
Score = 67.9 bits (34), Expect = 6e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| | | |||||||| | |||||| ||||
Sbjct: 234 tactccctccgtcccataatataagggattttgactatttgcttgcactgtttga-ccac 176
Query: 64 tcgtcttattcaaa 77
| ||||||||||||
Sbjct: 175 ttgtcttattcaaa 162
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| | || | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacagtgcaagcaaaaagtcaaaatcccttatattatgg 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01062;MIR812;AACV01023580.1/13642-13468 39947:Oryza sativa
Japonica Group
Length = 175
Score = 131 bits (66), Expect = 5e-30
Identities = 111/127 (87%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| ||||||| |||||||| |||||| ||||||||| |||||||||||||
Sbjct: 175 gtttttacttgtaatgtttgacc-actcgttttattcaaaaatttttgaaattattaatt 117
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||||||||||||||||||||||||| || | ||||||||||| |||||||| |||||||
Sbjct: 116 attttatttgtgacttactttattatttatagtactttaagcacaacttttcgtttttta 57
Query: 158 tatttgc 164
|||||||
Sbjct: 56 tatttgc 50
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||| ||||||||| |||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttga-tcactcgtcttattcaaa 39
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaa 210
||||||||| || ||||||||||| ||||| |||||||
Sbjct: 137 tttgaataaaacgagtggtcaaacattacaagtaaaaa 174
>RF01062;MIR812;AAAA02017093.1/21668-21840 39946:Oryza sativa Indica
Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 126 aaattattaattattttatttatgacttactttattatctataatactttaagcataact 67
Query: 146 tttcattttttatatttg 163
|||| |||||||||||||
Sbjct: 66 tttcgttttttatatttg 49
>RF01062;MIR812;AP004302.3/102499-102666 39947:Oryza sativa Japonica
Group
Length = 168
Score = 131 bits (66), Expect = 5e-30
Identities = 99/111 (89%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||| ||||||||||||||| |||||||||||||||| |||||||||| ||
Sbjct: 168 gtttttgtttgtaacgtttgacc-actcgtcttattcaaatttttttgaaattattattt 110
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataactttt 148
||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 109 attttatttgtgacttactttattatctacagtactttaagcataactttt 59
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttaca 202
|||||||||||| |||||||||||||||||
Sbjct: 130 tttgaataagacgagtggtcaaacgttaca 159
>RF01062;MIR812;AC093088.4/58736-58908 39947:Oryza sativa Japonica
Group
Length = 173
Score = 131 bits (66), Expect = 5e-30
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||||||| ||||||||| | | |||||||||||||||
Sbjct: 127 gaaattattatttattttatttgtgacttaatttattatccacagtactttaagcataac 68
Query: 145 ttttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgttacatg 204
||||||||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct: 67 ttttcattttttatatttgtaaaaaaaaattgaataagacaagtggtcaaacgttacaag 8
Query: 205 taaaaa 210
||||||
Sbjct: 7 taaaaa 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaa 76
|||||| |||||||||||||| ||||| |||||||||||
Sbjct: 1 gtttttacttgtaacgtttga-ccacttgtcttattcaa 38
>RF01058;MIR806;AAAA02031014.1/26426-26184 39946:Oryza sativa Indica
Group
Length = 243
Score = 131 bits (66), Expect = 5e-30
Identities = 135/159 (84%), Gaps = 1/159 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| | ||||||||| | |||||||| |
Sbjct: 2 tactccctccgtcccataatataagggattttgactttttgcttacactgtttgacc-at 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||||| ||||||||||||||| ||||||||||||
Sbjct: 61 tcgtcttattcaaaaaaaattagaattattatttattttatttgtgatttactttattat 120
Query: 124 ctaaaatactttaagcataacttttcattttttatattt 162
| ||| ||||||||||| ||||||| |||||||||||||
Sbjct: 121 ccaaagtactttaagcacaactttttattttttatattt 159
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagttttt 43
||||||||||||| |||||||||||||||||||| |||||
Sbjct: 242 tactccctccgtcccataatataagggattttaacttttt 203
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| | ||||||||| | | | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgaatggtcaaacagtgtaagcaaaaagtcaaaatcccttatattatgg 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01062;MIR812;AAAA02006096.1/10115-10287 39946:Oryza sativa Indica
Group
Length = 173
Score = 129 bits (65), Expect = 2e-29
Identities = 110/126 (87%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||| ||||||||||||||| |||||||||||||||| |||||||||| ||
Sbjct: 173 gtttttgtttgtaacgtttgacc-actcgtcttattcaaattcttttgaaattattattt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||| ||||| | ||||||||||| || ||||| |||||||
Sbjct: 114 attttatttgtgacttactttatcatctacagtactttaagcacaatttttcgtttttta 55
Query: 158 tatttg 163
||||||
Sbjct: 54 tatttg 49
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttaca 202
|||||||||||| |||||||||||||||||
Sbjct: 135 tttgaataagacgagtggtcaaacgttaca 164
>RF01062;MIR812;AAAA02022622.1/23036-23207 39946:Oryza sativa Indica
Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 110/126 (87%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatta 98
|||||||||||||||||| ||| ||| |||||||| ||| ||||||||||||||
Sbjct: 171 tttttgcttgtaacgtttaacc-acttgtcttatttaaatttttttgaaattattaatta 113
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 158
|||||||||||||||||||||||||||| | ||||||||||| || ||||| ||||||||
Sbjct: 112 ttttatttgtgacttactttattatctacagtactttaagcacaaattttcgttttttat 53
Query: 159 atttgc 164
||||||
Sbjct: 52 atttgc 47
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||| ||||||||| |||||| |||||||||||
Sbjct: 1 gtttttgcttgcaacgtttga-ccactcatcttattcaaa 39
>RF01062;MIR812;AACV01007669.1/15637-15464 39947:Oryza sativa
Japonica Group
Length = 174
Score = 129 bits (65), Expect = 2e-29
Identities = 110/126 (87%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| || |||||||| |||||||||||||||| |||||||||| ||
Sbjct: 174 gtttttgcttgcaatgtttgacc-actcgtcttattcaaaaaaatttgaaattattattt 116
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | || |||||||||||||||| |||||||
Sbjct: 115 attttatttgtgacttactttattatctacagtattttaagcataactttttgtttttta 56
Query: 158 tatttg 163
||||||
Sbjct: 55 tatttg 50
>RF01062;MIR812;AACV01022584.1/5740-5911 39947:Oryza sativa Japonica
Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 74/77 (96%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 126 aaattattaattattttatttgtgacttactttattatctacaataatttaagcataact 67
Query: 146 tttcattttttatattt 162
|||| ||||||||||||
Sbjct: 66 tttcgttttttatattt 50
>RF01062;MIR812;AACV01016049.1/9539-9711 39947:Oryza sativa Japonica
Group
Length = 173
Score = 129 bits (65), Expect = 2e-29
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||||||||||||||| | || |||||||| | ||
Sbjct: 126 aaattattatttattttatttgtgacttactttattatctacagtattttaagcacatct 67
Query: 146 tttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgttacatgt 205
|||| |||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct: 66 tttcgttttttatatttgcaaaaaaaatttgaataagacgagtggtcaaacgttacaagt 7
Query: 206 aaaaa 210
|||||
Sbjct: 6 aaaaa 2
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
|||||| |||||||||||||| ||||||||||||||||||
Sbjct: 1 gtttttacttgtaacgtttga-ccactcgtcttattcaaa 39
>RF01058;MIR806;AACV01002156.1/2447-2686 39947:Oryza sativa Japonica
Group
Length = 240
Score = 129 bits (65), Expect = 2e-29
Identities = 136/160 (85%), Gaps = 4/160 (2%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||||||||||| |||| | |||||| ||||
Sbjct: 2 tactccctccgtcccataatataagggattttaagtttttacttgcactgtttga-ccac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| | |||||| || || | ||| ||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaattttggaattat---tttttgtttttttgacttactttattat 117
Query: 124 ctaaaatactttaagcataacttttcattttttatatttg 163
| |||||||||||||||||||||||| |||| ||||||||
Sbjct: 118 ccaaaatactttaagcataacttttcgttttctatatttg 157
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
||||||||||||||||||||||||| |||||| ||||||||||| | |||||| |||
Sbjct: 240 gtactccctccgtctcataatataaaagattttgagtttttgcttccactgtttga-cca 182
Query: 63 ctcgtcttattcaaa 77
||||||||||||||
Sbjct: 181 ttcgtcttattcaaa 167
Score = 67.9 bits (34), Expect = 6e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| | || ||||||| | ||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacagtgcaagtaaaaacttaaaatcccttatattatgg 15
Query: 233 gacagagggagtag 246
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01062;MIR812;AAAA02004745.1/59056-59226 39946:Oryza sativa Indica
Group
Length = 171
Score = 127 bits (64), Expect = 8e-29
Identities = 77/80 (96%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gaaattattatttattttatttgtgacttactttattatctaaaatactttaagcataa- 67
Query: 145 ttttcattttttatatttgc 164
||||| ||||||||||||||
Sbjct: 66 ttttcgttttttatatttgc 47
>RF01062;MIR812;AAAA02000041.1/40875-40703 39946:Oryza sativa Indica
Group
Length = 173
Score = 127 bits (64), Expect = 8e-29
Identities = 143/173 (82%), Gaps = 1/173 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| |||||||||| |||||||||||||||| ||||||||||||
Sbjct: 173 gtttttgcttgctacgtttgacc-actcgtcttattcaaaattttttaaaattattaatt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||||||||||||||| |||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 114 attttatttgtgacttgctttattatctacggtactttaagcacaacttttcgtttttta 55
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaacgttacatgtaaaaa 210
|||||| |||||||||||| ||||||||||| |||| |||||||
Sbjct: 54 tatttgtaaaaaaaatttgaataagacgagtggtcaaacattaccagtaaaaa 2
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgt 198
|||||||||||| |||||||||||||
Sbjct: 135 tttgaataagacgagtggtcaaacgt 160
>RF01062;MIR812;AACV01013318.1/11508-11337 39947:Oryza sativa
Japonica Group
Length = 172
Score = 127 bits (64), Expect = 8e-29
Identities = 109/125 (87%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatta 98
|||||||||| ||||||||||| |||||||||||||||| ||||||||| |||
Sbjct: 171 tttttgcttgcaacgtttgacc-actcgtcttattcaaattttttttaaattattattta 113
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 158
|||||||||||||||||||||||||||| | || |||||||| |||||||| ||||||||
Sbjct: 112 ttttatttgtgacttactttattatctatagtagtttaagcacaacttttcgttttttat 53
Query: 159 atttg 163
|||||
Sbjct: 52 atttg 48
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgtt 199
|||||||||||| ||||||||||||||
Sbjct: 134 tttgaataagacgagtggtcaaacgtt 160
>RF01058;MIR806;AP004672.3/59439-59196 39947:Oryza sativa Japonica
Group
Length = 244
Score = 127 bits (64), Expect = 8e-29
Identities = 136/161 (84%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| | |||||||||||||||| | ||||||||| || ||||||| |
Sbjct: 2 tactccctccgtcccctaatataagggattttgacattttgcttgcaatatttgacc-at 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|| ||||||||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct: 61 tcatcttattcaaaaaattttggaattattatttattttatttgtgacttactttattat 120
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgc 164
| ||| ||||||| ||| ||||| |||||||||||||||||
Sbjct: 121 ccaaagtactttaggcacaacttgtcattttttatatttgc 161
Score = 52.0 bits (26), Expect = 4e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| | ||||| |||||||||| | ||||||||||| ||||| |||
Sbjct: 243 tactccctccgtcccctaatacaagggattttgatattttgcttgtactatttga-ccat 185
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 184 tcgtcttattcaaa 171
>RF01058;MIR806;AACV01010642.1/18111-18350 39947:Oryza sativa
Japonica Group
Length = 240
Score = 127 bits (64), Expect = 8e-29
Identities = 197/242 (81%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||||| |||||| ||||||||||||||||| |||||||||||| | ||||||||| ||
Sbjct: 2 tactccatccgtcccataatataagggatttggagtttttgcttgcaccgtttgacc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|| ||||||| ||| |||||||||| ||| ||| ||||||||||||||||||||
Sbjct: 61 tcatcttattaaaaaaatt--gaaattattatttaattt-tttgtgacttactttattat 117
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| ||| ||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 118 ccaaagtactttaagtgcaacttttcgttttttatatttgcacaaattttttgaataaga 177
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
| ||||||||||| | | ||||| ||||||| ||||||||| |||||| |||||||
Sbjct: 178 cgagtggtcaaacaaagtaagcaaaaactcaaaatcccttatattatgggacggagggag 237
Query: 244 ta 245
||
Sbjct: 238 ta 239
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||
Sbjct: 240 gtactccctccgtcccataatataagggattttgagtttttgcttactttgtttga-cca 182
Query: 63 ctcgtcttattcaaa 77
|||||||||||||||
Sbjct: 181 ctcgtcttattcaaa 167
>RF01062;MIR812;AAAA02008634.1/17996-17821 39946:Oryza sativa Indica
Group
Length = 176
Score = 125 bits (63), Expect = 3e-28
Identities = 114/132 (86%), Gaps = 6/132 (4%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||||||||||||||| |||||||||||||||| |||||||||| ||
Sbjct: 176 gtttttgcttgtaacgtttgacc-actcgtcttattcaaaattttttgaaattattattt 118
Query: 98 attttatttgtgacttacttta-----ttatctaaaatactttaagcataacttttcatt 152
|||||||||||||||||||||| ||||||| |||||||||||||||||||| ||
Sbjct: 117 attttatttgtgacttactttactttattatctacgatactttaagcataactttttgtt 58
Query: 153 ttttatatttgc 164
||||||||||||
Sbjct: 57 ttttatatttgc 46
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttaca 202
|||||||||||| |||||||||||||||||
Sbjct: 138 tttgaataagacgagtggtcaaacgttaca 167
>RF01062;MIR812;AACV01025331.1/33364-33536 39947:Oryza sativa
Japonica Group
Length = 173
Score = 125 bits (63), Expect = 3e-28
Identities = 108/124 (87%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatta 98
||||| |||| ||||||||| | |||||||||||||||| |||||||||| |||
Sbjct: 172 ttttttcttgcaacgtttgatc-actcgtcttattcaaaattttttgaaattattattta 114
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 158
|||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||||
Sbjct: 113 ttttatttgtgacttactttattatctatagtactttaagcacaactttttattttttat 54
Query: 159 attt 162
||||
Sbjct: 53 attt 50
>RF01062;MIR812;AAAA02010926.1/12447-12618 39946:Oryza sativa Indica
Group
Length = 172
Score = 125 bits (63), Expect = 3e-28
Identities = 137/164 (83%), Gaps = 2/164 (1%)
Strand = Plus / Minus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatta 98
|||||| ||||||||||||| | |||||||||||| || |||||||||| |||
Sbjct: 171 tttttgtttgtaacgtttgatc-actcgtcttatttaatttgttttgaaattattattta 113
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 158
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 112 gtttatttgtgacttactttattatctacaatactttaagcataacttttc-gtttttat 54
Query: 159 atttgcnnnnnnnntttgaataagactagtggtcaaacgttaca 202
|||||| |||||||||||| |||| ||||||||||||
Sbjct: 53 atttgcaaaaataatttgaataagacgagtgatcaaacgttaca 10
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||| ||||||||||||| |||||||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttga-tcactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02003196.1/32277-32449 39946:Oryza sativa Indica
Group
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 112/127 (88%), Gaps = 3/127 (2%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| | ||||||||| |||||||||||||||| |||||||||||||
Sbjct: 173 gtttttgcttgcagcgtttgacc-actcgtcttattcaaatttttttgaaattattaatt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||||||||||||||||||||| |||||| | ||||||||||| ||||||||| ||||||
Sbjct: 114 attttatttgtgacttacttta-tatctacagtactttaagcacaacttttca-ttttta 57
Query: 158 tatttgc 164
|||||||
Sbjct: 56 tatttgc 50
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||| ||||||||| |||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttga-gcactcgtcttattcaaa 39
>RF01062;MIR812;AP008208.1/33215908-33216080 39947:Oryza sativa
Japonica Group
Length = 173
Score = 123 bits (62), Expect = 1e-27
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| || |||||||||||||||||||||||||| | | ||||||||||| |||
Sbjct: 127 gaaattattatttgttttatttgtgacttactttattatccacagtactttaagcacaac 68
Query: 145 ttttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgttaca 202
||||| |||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 67 ttttcgttttttatatttgcacaaattttttgaataagacgagtggtcaaacgttaca 10
Score = 48.1 bits (24), Expect = 6e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 46 ttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||||||| ||||||||||||||||
Sbjct: 9 ttgtaacgtttgacc-actcgtcttattcaaa 39
>RF01062;MIR812;AP003849.2/59096-58923 39947:Oryza sativa Japonica
Group
Length = 174
Score = 123 bits (62), Expect = 1e-27
Identities = 110/127 (86%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| ||||||||||| ||| ||||||||||| |||||||||| ||
Sbjct: 174 gtttttgcttgcaacgtttgacc-acttgtcttattcaacaaattttgaaattattattt 116
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||
Sbjct: 115 attttatttgtgacttaatttattatctacagtactttaagcataacttttcgcttttta 56
Query: 158 tatttgc 164
|||||||
Sbjct: 55 tatttgc 49
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttgacc-actcgtcttattcaaa 39
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 174 ttgaataagactagtggtcaaacgtt 199
||||||||||| ||||||||||||||
Sbjct: 137 ttgaataagacaagtggtcaaacgtt 162
>RF01062;MIR812;AACV01002753.1/4109-4282 39947:Oryza sativa Japonica
Group
Length = 174
Score = 123 bits (62), Expect = 1e-27
Identities = 109/127 (85%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||||||||||| ||||| ||||||||||| ||||||||| ||
Sbjct: 174 gtttttgcttgtaacgttttgaccacttgtcttattcaacaaattttaaaattattattt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||||
Sbjct: 114 attttatttgtgacttactttattatctacagtactttaagcacaacttttcgtttttta 55
Query: 158 tatttgc 164
|||||||
Sbjct: 54 tatttgc 48
>RF01058;MIR806;AAAA02014047.1/6193-6435 39946:Oryza sativa Indica
Group
Length = 243
Score = 123 bits (62), Expect = 1e-27
Identities = 200/246 (81%), Gaps = 5/246 (2%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggattttaagttttt--gcttgtaacgtttgacc 60
||||||||| |||| |||||||||||||||||| | ||||| ||| | | ||||||||
Sbjct: 1 gtactcccttcgtcccataatataagggattttgactttttttgctggcactgtttgacc 60
Query: 61 cactcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttat 120
| |||||||||||||| | |||||||| ||||||||||| ||||| |||||||
Sbjct: 61 -attcgtcttattcaaaaaattttggaattattatttattttatttatgact-actttat 118
Query: 121 tatctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaata 180
|||| ||| ||||||||||| ||| |||| |||||||||||||| ||||||||
Sbjct: 119 tatccaaagtactttaagcacaac-tttcgttttttatatttgcacaaattttttgaata 177
Query: 181 agactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagg 240
|||| ||| ||||||| | || ||||||| ||||||| ||||||||| |||||| ||||
Sbjct: 178 agacgagtagtcaaacagtgcaagtaaaaagtcaaaatcccttatattatgggacggagg 237
Query: 241 gagtag 246
||||||
Sbjct: 238 gagtag 243
Score = 67.9 bits (34), Expect = 6e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| | ||||| |||| | |||||| | ||
Sbjct: 242 tactccctccgtcccataatataagggattttgactttttacttgcactgtttga-ctac 184
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 183 tcgtcttattcaaa 170
>RF01058;MIR806;AAAA02003762.1/8891-8652 39946:Oryza sativa Indica
Group
Length = 240
Score = 123 bits (62), Expect = 1e-27
Identities = 186/227 (81%), Gaps = 4/227 (1%)
Strand = Plus / Plus
Query: 19 ataatataagggattttaagtttttgcttgtaacgtttgacccactcgtcttattcaaan 78
||||||||||||||||| |||||||| ||| | |||||||| ||||||||||||||||
Sbjct: 17 ataatataagggattttgagtttttgtttgaactgtttgacc-actcgtcttattcaaaa 75
Query: 79 nnnnnngaaattattaattattttatttgtgacttactttattatctaaaatactttaag 138
|||||||||| |||||| |||| |||||| |||||||||||||| || ||||||
Sbjct: 76 gattttgaaattattatttattt-attt-tgacttgctttattatctaaagtattttaag 133
Query: 139 cataacttttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgt 198
||||||||||| |||||||||||||| ||| |||||||| |||||||||||
Sbjct: 134 cataacttttcgttttttatatttgcacaaatttttt-aataagacgagtggtcaaacag 192
Query: 199 tacatgtaaaaaatcaaaataccttatattgtgggacagagggagta 245
| || ||||| ||||||| ||||||||| |||||| | |||||||
Sbjct: 193 ttcaaccaaaaactcaaaatcccttatattatgggacggggggagta 239
Score = 67.9 bits (34), Expect = 6e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||| ||||| |||||||||||||||||| |||||||| ||| | |||||| ||||
Sbjct: 239 tactccccccgtcccataatataagggattttgagtttttggttgaactgtttga-ccac 181
Query: 64 tcgtcttatt 73
||||||||||
Sbjct: 180 tcgtcttatt 171
>RF01062;MIR812;AAAA02016557.1/24055-24229 39946:Oryza sativa Indica
Group
Length = 175
Score = 121 bits (61), Expect = 5e-27
Identities = 110/126 (87%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 40 ttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaattat 99
||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||
Sbjct: 173 ttttgcttgcaacgtttgacc-actcgtcttattcaaaattttttgaaattattatttat 115
Query: 100 tttatttgt-gacttactttattatctaaaatactttaagcataacttttcattttttat 158
||||||||| |||||||||||||||||| | |||||||| || |||||||| ||||||||
Sbjct: 114 tttatttgtcgacttactttattatctacagtactttaaacacaacttttcgttttttat 55
Query: 159 atttgc 164
||||||
Sbjct: 54 atttgc 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgtt 199
|||||||||||| ||||||||||||||
Sbjct: 137 tttgaataagacgagtggtcaaacgtt 163
>RF01062;MIR812;AAAA02025228.1/28145-27974 39946:Oryza sativa Indica
Group
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 100/114 (87%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||||||||||||||| | ||||||||||| || |
Sbjct: 125 aaattattatttattttatttgtgacttactttattatctatagtactttaagcacaatt 66
Query: 146 tttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgtt 199
||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 65 tttcattttttatatttgc-aaaaaaatttgaataagacgagtggtcaaacgtt 13
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttga-ccactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02007251.1/7007-6836 39946:Oryza sativa Indica
Group
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 109/126 (86%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||||||| ||||||||||| ||||||||||||||| |||||||||| ||
Sbjct: 172 gtttttgcttacaacgtttgacc-actcgtcttattcaatattttttgaaattattattt 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||
Sbjct: 113 attttatttgtgacttactttattatctacagcactttaagcataacttttcgcttttta 54
Query: 158 tatttg 163
||||||
Sbjct: 53 tatttg 48
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 174 ttgaataagactagtggtcaaacgtt 199
||||||||||| ||||||||||||||
Sbjct: 135 ttgaataagacgagtggtcaaacgtt 160
>RF01062;MIR812;AAAA02018583.1/14874-15047 39946:Oryza sativa Indica
Group
Length = 174
Score = 121 bits (61), Expect = 5e-27
Identities = 109/126 (86%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| |||| ||||||||||| |||||||||||||||| ||||||||| ||
Sbjct: 174 gtttttacttgaaacgtttgacc-actcgtcttattcaaaaaattttaaaattattattt 116
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||
Sbjct: 115 attttatttgtgacttactttattatctacaatactttaatcacaactttttgtttttta 56
Query: 158 tatttg 163
||||||
Sbjct: 55 tatttg 50
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaa 210
|||||||||||| |||||||||||||| || |||||||
Sbjct: 136 tttgaataagacgagtggtcaaacgtttcaagtaaaaa 173
>RF01062;MIR812;AAAA02011387.1/17306-17134 39946:Oryza sativa Indica
Group
Length = 173
Score = 121 bits (61), Expect = 5e-27
Identities = 134/162 (82%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| || ||||||| ||||||||||||||| |||||||||||||
Sbjct: 173 gtttttgcttgcaatgtttgaca-actcgtcttattcaacaaaatttgaaattattaatt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||| |||||||||||||| | ||||||||||| |||||||| ||||| |
Sbjct: 114 attttatttgtgatatactttattatctatagtactttaagcacaacttttcgtttttaa 55
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaacgtt 199
||||||| |||||||||||| ||||||||||||||
Sbjct: 54 tatttgcaaaaaaaatttgaataagacgagtggtcaaacgtt 13
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
|||||||||| ||||||||||| ||||||||||||||||
Sbjct: 1 gtttttgcttacaacgtttgacc-actcgtcttattcaaa 39
>RF01062;MIR812;AL731589.3/75309-75482 39947:Oryza sativa Japonica
Group
Length = 174
Score = 121 bits (61), Expect = 5e-27
Identities = 138/166 (83%), Gaps = 2/166 (1%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||| |||||||| |||||| |||||||||||||||| |||||||||| ||
Sbjct: 174 gtttttgattgtaacgattgacc-actcgtcttattcaaatttttttgaaattattattt 116
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||| ||||||| ||||||||||| ||||||||||||| || ||| | |||||||
Sbjct: 115 attttatttatgacttattttattatctacaatactttaagcacaattttacgtttttta 56
Query: 158 tatttgc-nnnnnnnntttgaataagactagtggtcaaacgttaca 202
||||||| |||||||||||| |||||||||||||||||
Sbjct: 55 tatttgcaaaaaaaaatttgaataagacgagtggtcaaacgttaca 10
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 1 gtttttgattgtaacgtttga-ccactcgtcttattcaaa 39
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttaca 202
|||||||||||| ||||||||| |||||||
Sbjct: 136 tttgaataagacgagtggtcaatcgttaca 165
>RF01062;MIR812;AP004632.3/138567-138739 39947:Oryza sativa Japonica
Group
Length = 173
Score = 121 bits (61), Expect = 5e-27
Identities = 134/162 (82%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| ||||||||||| |||||||||| ||||| |||||||||| ||
Sbjct: 173 gtttttgcttgcaacgtttgacc-actcgtcttaatcaaaaaattttgaaattattattt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||| ||||||||||||||||||| | || |||||||| ||||||| |||||||
Sbjct: 114 attttatttatgacttactttattatctacagtattttaagcacaactttttgtttttta 55
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaacgtt 199
||||||| ||| |||||||| ||||||||||||||
Sbjct: 54 tatttgcaaaaaaaatttaaataagacaagtggtcaaacgtt 13
>RF01058;MIR806;AACV01009412.1/1317-1556 39947:Oryza sativa Japonica
Group
Length = 240
Score = 121 bits (61), Expect = 5e-27
Identities = 196/244 (80%), Gaps = 4/244 (1%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| | |||||||||||||||| | ||||||||| | |||||||| |
Sbjct: 1 gtactccctccgtcccctaatataagggattttgatattttgcttgcactgtttgacc-a 59
Query: 63 ctcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttatta 122
|||||||||||||| | || |||| || |||| |||||||||||||||||
Sbjct: 60 ttcgtcttattcaaaaaattttggaaccattatttttttt---tgtgacttactttatta 116
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
|| ||| | |||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 117 tccaaagtgctttaagcataacttttcgttttttatatttgcacaaattttttgaataag 176
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| ||||||||||| | || | |||| |||||||| ||||||||| |||||| |||| |
Sbjct: 177 acgagtggtcaaacagtgcaagcaaaatatcaaaatcccttatattatgggacggaggaa 236
Query: 243 gtag 246
||||
Sbjct: 237 gtag 240
Score = 67.9 bits (34), Expect = 6e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||| |||||||| |||||||||||||||||| | ||||||||| | |||||| ||||
Sbjct: 239 tacttcctccgtcccataatataagggattttgatattttgcttgcactgtttga-ccac 181
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 180 tcgtcttattcaaa 167
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| | ||||||||| | || | |||| |||||||| ||||||||| ||
Sbjct: 74 tttgaataagacgaatggtcaaacagtgcaagcaaaatatcaaaatcccttatattaggg 15
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01062;MIR812;AAAA02019003.1/8410-8580 39946:Oryza sativa Indica
Group
Length = 171
Score = 119 bits (60), Expect = 2e-26
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 125 gaaattattatttattttatttgtgacttactttattatctaccgtactttaagcataac 66
Query: 145 ttttcattttttatatttgc 164
||||| ||||||||||||||
Sbjct: 65 ttttcgttttttatatttgc 46
>RF01062;MIR812;AAAA02023753.1/2650-2478 39946:Oryza sativa Indica
Group
Length = 173
Score = 119 bits (60), Expect = 2e-26
Identities = 136/165 (82%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||||||||||||||| ||||||||||||| | |||| |||||
Sbjct: 173 gtttttgcttgtaacgtttgacc-actcgtcttattcgctattttttgcgattagtaatt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||| ||| || |||||||||||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 114 attgtatgtgggacttactttattatctatagtactttaagcacaacttttcatttttta 55
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaacgttaca 202
||||||| |||||||||||| |||||||||||||||||
Sbjct: 54 tatttgcaaaaaaaatttgaataagacgagtggtcaaacgttaca 10
Score = 63.9 bits (32), Expect = 1e-09
Identities = 39/40 (97%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttga-ccactcgtcttattcaaa 39
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 176 gaataagactagtggtcaaacgttaca 202
||||||||| |||||||||||||||||
Sbjct: 138 gaataagacgagtggtcaaacgttaca 164
>RF01062;MIR812;AAAA02035816.1/557-386 39946:Oryza sativa Indica
Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 99/113 (87%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 50 aacgtttgacccactcgtcttattcaaannnnnnngaaattattaattattttatttgtg 109
||||||||||| |||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 160 aacgtttgacc-actcgtcttattcaaaaaattttaaaattattatttattttatttgtg 102
Query: 110 acttactttattatctaaaatactttaagcataacttttcattttttatattt 162
||||||||||||||||| | ||||||||||| ||||||||||||||||||||
Sbjct: 101 acttactttattatctacagtactttaagcactacttttcattttttatattt 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgtt 199
|||||||||||| ||||||||||||||
Sbjct: 134 tttgaataagacgagtggtcaaacgtt 160
>RF01062;MIR812;ABRL01000707.1/2129-1958 65489:Oryza barthii
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 108/125 (86%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatta 98
|||||||||| ||||||||||| |||||||||||| ||| |||||||||| |||
Sbjct: 171 tttttgcttgcaacgtttgacc-actcgtcttatttaaatttttttgaaattattattta 113
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 158
|||||||||||||||||||||||||||| ||||||||| | |||||||| ||||||||
Sbjct: 112 ttttatttgtgacttactttattatctaccgtactttaagtacaacttttcgttttttat 53
Query: 159 atttg 163
|||||
Sbjct: 52 atttg 48
>RF01062;MIR812;AAAA02028052.1/20898-20729 39946:Oryza sativa Indica
Group
Length = 170
Score = 119 bits (60), Expect = 2e-26
Identities = 132/160 (82%), Gaps = 2/160 (1%)
Strand = Plus / Minus
Query: 40 ttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaattat 99
|||| ||||||||||||||| |||||||||| ||||| |||||||||| ||||
Sbjct: 170 tttttcttgtaacgtttgac--actcgtcttaatcaaatttttttgaaattattatttat 113
Query: 100 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 159
||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 112 tttatttgtgacttactttattatctaccgtactttaagcacaacttttcgttttttata 53
Query: 160 tttgcnnnnnnnntttgaataagactagtggtcaaacgtt 199
| || |||||||||||| ||||||||||||||
Sbjct: 52 tctgtaaaaaaaatttgaataagacgagtggtcaaacgtt 13
>RF01062;MIR812;AAAA02010366.1/9316-9488 39946:Oryza sativa Indica
Group
Length = 173
Score = 119 bits (60), Expect = 2e-26
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||||||||
Sbjct: 126 aaattattatttattttatttgtgacttactttattacccaaagtactttaagcataact 67
Query: 146 tttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacg 197
|||| |||||||||||| | |||||||||||| ||||||||||||
Sbjct: 66 tttcgttttttatatttacacaaatcttttgaataagacaagtggtcaaacg 15
>RF01062;MIR812;AAAA02017486.1/15008-15178 39946:Oryza sativa Indica
Group
Length = 171
Score = 119 bits (60), Expect = 2e-26
Identities = 92/105 (87%)
Strand = Plus / Minus
Query: 60 ccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttacttta 119
|||||||||||||||||| |||||||||| ||||||| || |||||||||||||
Sbjct: 150 ccactcgtcttattcaaaacattttgaaattattatttatttttttcgtgacttacttta 91
Query: 120 ttatctaaaatactttaagcataacttttcattttttatatttgc 164
||||| ||||||||||||||| |||||||| ||||||||||||||
Sbjct: 90 ttatccaaaatactttaagcacaacttttcgttttttatatttgc 46
>RF01062;MIR812;AAAA02018550.1/1210-1039 39946:Oryza sativa Indica
Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 108/125 (86%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| ||||||| ||||||| |||||||||||| ||| |||||||||| ||
Sbjct: 172 gtttttacttgtaatatttgacc-actcgtcttatttaaaattttttgaaattattattt 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 113 attttatttgtaacttactttattatctacagtactttaagcacaacttttcatttttta 54
Query: 158 tattt 162
|||||
Sbjct: 53 tattt 49
Score = 48.1 bits (24), Expect = 6e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttatt 73
|||||| |||||||||||||| ||||||||||||||
Sbjct: 1 gtttttacttgtaacgtttga-ccactcgtcttatt 35
>RF01062;MIR812;AC025296.10/17042-16871 4530:Oryza sativa (rice)
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 108/125 (86%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatta 98
||||| |||| ||||||||||| |||||||||||| ||| ||||||||| |||
Sbjct: 171 tttttacttgcaacgtttgacc-actcgtcttatttaaaaaaatttaaaattattattta 113
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 158
|||||||||||||||||||||||||||| | || |||||||| |||||||||||||||||
Sbjct: 112 ttttatttgtgacttactttattatctacagtaatttaagcacaacttttcattttttat 53
Query: 159 atttg 163
|||||
Sbjct: 52 atttg 48
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 177 aataagactagtggtcaaacgttacatgtaaaaa 210
|||||||| |||||||||||||| || |||||||
Sbjct: 138 aataagacgagtggtcaaacgttgcaagtaaaaa 171
>RF01062;MIR812;AACV01025949.1/8418-8245 39947:Oryza sativa Japonica
Group
Length = 174
Score = 119 bits (60), Expect = 2e-26
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| |||||||||||||||||||||||||||| || | ||||||||||| |||
Sbjct: 127 gaaattattatttattttatttgtgacttactttattatatacagtactttaagcacaac 68
Query: 145 ttttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaac 196
|||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 67 ttttcattttttatatttacaaaaaaaatttgaataagacgagtggtcaaac 16
>RF01062;MIR812;AACV01013079.1/2108-2281 39947:Oryza sativa Japonica
Group
Length = 174
Score = 119 bits (60), Expect = 2e-26
Identities = 108/125 (86%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 40 ttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaattat 99
|||| |||||||||||||||| ||| |||||||| ||| |||||||||||||||
Sbjct: 172 tttttcttgtaacgtttgacc-acttgtcttatttaaaaaattttgaaattattaattat 114
Query: 100 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 159
||||||||||| ||||||||||||||| | |||||||| || |||||||| |||||||||
Sbjct: 113 tttatttgtgagttactttattatctacagtactttaaacacaacttttcgttttttata 54
Query: 160 tttgc 164
|||||
Sbjct: 53 tttgc 49
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttga-ccactcgtcttattcaaa 39
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 177 aataagactagtggtcaaacgttaca 202
|||||||| |||||||||||||||||
Sbjct: 140 aataagacaagtggtcaaacgttaca 165
>RF01062;MIR812;AP008215.1/16635749-16635577 39947:Oryza sativa
Japonica Group
Length = 173
Score = 117 bits (59), Expect = 8e-26
Identities = 107/124 (86%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 40 ttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaattat 99
|||| ||||||| ||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 171 tttttcttgtaatgtttgact-actcgtcttattcaaaaaattttaaaattattatttat 113
Query: 100 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 159
||||||||||||||||||||||||||| | || ||||||||||||||||| |||||||||
Sbjct: 112 tttatttgtgacttactttattatctacagtattttaagcataacttttcgttttttata 53
Query: 160 tttg 163
||||
Sbjct: 52 tttg 49
>RF01062;MIR812;AP008212.1/16608912-16609085 39947:Oryza sativa
Japonica Group
Length = 174
Score = 117 bits (59), Expect = 8e-26
Identities = 120/144 (83%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 60 ccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttacttta 119
|||||||||||||||||| | |||||||| ||||||||||||||||||||||||
Sbjct: 153 ccactcgtcttattcaaaaaattttggaattattatttattttatttgtgacttacttta 94
Query: 120 ttatctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaat 179
||||| ||| ||||||||||| || ||||| |||||||||||||| |||||||
Sbjct: 93 ttatccaaagtactttaagcacaagttttcgttttttatatttgcacaaattttttgaat 34
Query: 180 -aagactagtggtcaaacgttaca 202
||||| |||||||||||||||||
Sbjct: 33 aaagacgagtggtcaaacgttaca 10
>RF01062;MIR812;AAAA02013562.1/28796-28969 39946:Oryza sativa Indica
Group
Length = 174
Score = 117 bits (59), Expect = 8e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 126 aaattattatttattttatttgtgacttcctttattatctaaagtactttaagcataact 67
Query: 146 tttcattttttatat 160
||| |||||||||||
Sbjct: 66 tttaattttttatat 52
>RF01062;MIR812;AAAA02034869.1/21771-21600 39946:Oryza sativa Indica
Group
Length = 172
Score = 117 bits (59), Expect = 8e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||| ||||||||||| |||||||||| |||||||
Sbjct: 125 aaattattatttattttatttgtgacttattttattatctacaatactttaaacataact 66
Query: 146 tttcattttttatatttgc 164
||||| |||||||||||||
Sbjct: 65 tttcactttttatatttgc 47
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaa 210
|||||||||||| |||| ||||||||| || |||||||
Sbjct: 134 tttgaataagacaagtgttcaaacgttgcaagtaaaaa 171
>RF01062;MIR812;AP005387.3/148274-148447 39947:Oryza sativa Japonica
Group
Length = 174
Score = 117 bits (59), Expect = 8e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 127 gaaattattatttattttatttgtgacttactttattatctacagtactttaagcacaac 68
Query: 145 ttttcattttttatatttg 163
||||| |||||||||||||
Sbjct: 67 ttttcgttttttatatttg 49
Score = 44.1 bits (22), Expect = 0.001
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaa 76
|||||| ||||||||||||| ||||||||||||||||
Sbjct: 2 tttttgtttgtaacgtttga-tcactcgtcttattcaa 38
>RF01062;MIR812;AACV01016994.1/6652-6822 39947:Oryza sativa Japonica
Group
Length = 171
Score = 117 bits (59), Expect = 8e-26
Identities = 107/124 (86%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatta 98
||||| ||| |||||||| ||| |||||||||||| ||| ||||||||||||||
Sbjct: 170 ttttttcttctaacgtttaacc-actcgtcttatttaaaattttttgaaattattaatta 112
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 158
|||||||||||||||||||||||||||| | ||||||||||| || ||||| ||||||||
Sbjct: 111 ttttatttgtgacttactttattatctatagtactttaagcacaaattttcgttttttat 52
Query: 159 attt 162
||||
Sbjct: 51 attt 48
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaa 76
||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 1 gtttttgcttgcaacgtttga-ccactcatcttattcaa 38
>RF01058;MIR806;AP008214.1/15639424-15639183 39947:Oryza sativa
Japonica Group
Length = 242
Score = 117 bits (59), Expect = 8e-26
Identities = 135/160 (84%), Gaps = 2/160 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||| ||||||| |||||||||||||||||| |||||||| || | |||||||| ||
Sbjct: 2 tactctctccgtcccataatataagggattttgagtttttgtgtgaactgtttgacc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||| ||| | |||||||| |||||| |||| ||||||||||||||||
Sbjct: 61 tcgtcttattaaaaaatttttggaattattatttattt-atttttgacttactttattat 119
Query: 124 ctaaaatactttaagcataacttttcattttttatatttg 163
||||| |||||||||| |||||||| |||||||||||||
Sbjct: 120 ctaaagtactttaagcgcaacttttcgttttttatatttg 159
Score = 56.0 bits (28), Expect = 2e-07
Identities = 66/76 (86%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataaggga-ttttaagtttttgcttgtaacgtttgaccc 61
|||||| ||||||| ||||||||||||| |||| |||||||| ||| | |||||| ||
Sbjct: 242 gtactctctccgtcctataatataagggatttttgagtttttggttgaactgtttga-cc 184
Query: 62 actcgtcttattcaaa 77
||||||||||||||||
Sbjct: 183 actcgtcttattcaaa 168
>RF01062;MIR812;AAAA02014896.1/1671-1842 39946:Oryza sativa Indica
Group
Length = 172
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| |||||||||||| |||||||||||||||| ||| |||||||||||||| ||
Sbjct: 124 aattattatttattttatttgcgacttactttattatccaaagtactttaagcataaatt 65
Query: 147 ttcattttttatatttgc 164
||||||||||||||||||
Sbjct: 64 ttcattttttatatttgc 47
>RF01062;MIR812;AAAA02000569.1/44845-44673 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 109/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| ||||||||||| ||||| |||||||||| |||||||||| ||
Sbjct: 173 gtttttgcttgcaacgtttgacc-actcggcttattcaaaaatttttgaaattattattt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||||||||||||||||||||||||| | | ||||||||| | |||||||| |||||||
Sbjct: 114 attttatttgtgacttactttattattcacagtactttaagtacaacttttcgtttttta 55
Query: 158 tatttgc 164
|||||||
Sbjct: 54 tatttgc 48
>RF01062;MIR812;ABRL01002103.1/5388-5215 65489:Oryza barthii
Length = 174
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 126 aattattatttattttctttgtgacttactttattatctaaaatactttaagcacaactt 67
Query: 147 ttcattttttatatttgc 164
| | ||||||||||||||
Sbjct: 66 tccgttttttatatttgc 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaa 76
||||||||||| || |||||||| |||||||||||||||
Sbjct: 1 gtttttgcttgcaatgtttgacc-actcgtcttattcaa 38
>RF01062;MIR812;AP003238.4/130582-130412 39947:Oryza sativa Japonica
Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 74/78 (94%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 123 aattattatttattttatttgtgacttactttattatctaaagtactttaagcacaactt 64
Query: 147 ttcattttttatatttgc 164
||| ||||||||||||||
Sbjct: 63 ttc-ttttttatatttgc 47
>RF01062;MIR812;AC145325.3/42995-43168 39947:Oryza sativa Japonica
Group
Length = 174
Score = 115 bits (58), Expect = 3e-25
Identities = 109/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| |||||||||| |||||| ||||||||| |||||||||| ||
Sbjct: 174 gtttttgcttgcaacgtttgact-actcgttttattcaaaatattttgaaattattattt 116
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | |||||||| || ||||||| |||||||
Sbjct: 115 attttatttgtgacttactttattatctatagtactttaaccacaactttttgtttttta 56
Query: 158 tatttgc 164
|||||||
Sbjct: 55 tatttgc 49
>RF01062;MIR812;AAAA02011062.1/27832-28005 39946:Oryza sativa Indica
Group
Length = 174
Score = 115 bits (58), Expect = 3e-25
Identities = 109/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||||||| ||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 174 gtttttgcttacaacgtttgacc-actcgtcttattcaaaattttttaaaattattaatt 116
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||||||||||||||| |||||||||||| | || ||||||| |||||||| |||||||
Sbjct: 115 attttatttgtgacttgctttattatctacagtattttaagctcaacttttcgtttttta 56
Query: 158 tatttgc 164
|||||||
Sbjct: 55 tatttgc 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgtt 199
|||||||||||| ||||||||||||||
Sbjct: 136 tttgaataagacgagtggtcaaacgtt 162
>RF01062;MIR812;AACV01003822.1/5854-6022 39947:Oryza sativa Japonica
Group
Length = 169
Score = 115 bits (58), Expect = 3e-25
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 40 ttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaattat 99
|||| |||| ||||||||||| |||||||||||||||| |||||||||| ||||
Sbjct: 167 ttttacttgcaacgtttgacc-actcgtcttattcaaatttttttgaaattattatttat 109
Query: 100 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 159
|||||||||||||||||||||||| || | |||||||| || |||||||| |||||||||
Sbjct: 108 tttatttgtgacttactttattatgtatagtactttaaacacaacttttcgttttttata 49
Query: 160 ttt 162
|||
Sbjct: 48 ttt 46
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaa 209
|||||||||||| |||||||||||||| || ||||||
Sbjct: 131 tttgaataagacgagtggtcaaacgttgcaagtaaaa 167
>RF01062;MIR812;AP008213.1/21799130-21798958 39947:Oryza sativa
Japonica Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||| ||||||||||||||||| ||||||||||||||| |||||
Sbjct: 125 aattattatttattttatttatgacttactttattatccaaaatactttaagcacaactt 66
Query: 147 ttcattttttatatttgc 164
|||||||||||| |||||
Sbjct: 65 ttcattttttatgtttgc 48
>RF01062;MIR812;AAAA02010595.1/33394-33562 39946:Oryza sativa Indica
Group
Length = 169
Score = 115 bits (58), Expect = 3e-25
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| ||||||||||| ||| |||||||||||| |||||||| | ||
Sbjct: 169 gtttttgcttgcaacgtttgacc-actagtcttattcaaatttttttgaaattatgagtt 111
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||||||||||||||| |||||||||||| | || ||||||||||||||||| |||||||
Sbjct: 110 attttatttgtgacttcctttattatctatagtattttaagcataacttttcgtttttta 51
Query: 158 tat 160
|||
Sbjct: 50 tat 48
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgtt 199
|||||||||||||||||||||||||||
Sbjct: 131 tttgaataagactagtggtcaaacgtt 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaa 76
||||||| ||| ||||||||||| |||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttgacc-actcgtcttattcaa 38
>RF01062;MIR812;AAAA02027301.1/10059-10231 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 125 aattattatttattttatttgtgatttactttattatccaaaatactttaagcacaactt 66
Query: 147 ttcattttttatatttgc 164
||| ||||||||||||||
Sbjct: 65 ttcgttttttatatttgc 48
>RF01062;MIR812;AAAA02027656.1/553-725 39946:Oryza sativa Indica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||| ||||||
Sbjct: 126 aaattattatttattttatttgtgacttattttattatctacaatacttcaagtataact 67
Query: 146 tttcattttttatatttg 163
||||||||||||||||||
Sbjct: 66 tttcattttttatatttg 49
>RF01058;MIR806;AP005912.3/106817-106576 39947:Oryza sativa Japonica
Group
Length = 242
Score = 115 bits (58), Expect = 3e-25
Identities = 195/243 (80%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| |||||||||||||||||| ||||||| ||| | |||||||| |
Sbjct: 1 gtactccctccgtcccataatataagggattttgagtttttatttgcactgtttgacc-a 59
Query: 63 ctcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttatta 122
||||||||||| ||| ||| |||||| ||||||| | |||||||||||||||||
Sbjct: 60 ctcgtcttattaaaaaaatttggaa-ttattatttattttttgtgtgacttactttatta 118
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataag 182
| ||| || |||||||| |||||||| |||||||||||||| ||| ||||||
Sbjct: 119 ttcaaagtattttaagcacaacttttcgttttttatatttgcacaatttttttaaataag 178
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
| ||||||||||| | || |||||| ||||||| ||||||||| ||| | ||||||
Sbjct: 179 atgagtggtcaaacaatgcaaataaaaactcaaaatcccttatattatggaatggaggga 238
Query: 243 gta 245
|||
Sbjct: 239 gta 241
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 177 aataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggaca 236
|||||||| ||||||||||| | || |||||| ||||||| ||||||||| ||||||
Sbjct: 70 aataagacgagtggtcaaacagtgcaaataaaaactcaaaatcccttatattatgggacg 11
Query: 237 gagggagta 245
|||||||||
Sbjct: 10 gagggagta 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagttttt 43
|||||||||| | |||||||||||||||||| |||||||
Sbjct: 241 tactccctccattccataatataagggattttgagttttt 202
>RF01062;MIR812;AAAA02004559.1/13841-13672 39946:Oryza sativa Indica
Group
Length = 170
Score = 113 bits (57), Expect = 1e-24
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct: 123 aaattattatttattttatttgtgacttactttattatctacagtactttaagcacaact 64
Query: 146 tttcattttttatattt 162
|||| ||||||||||||
Sbjct: 63 tttcgttttttatattt 47
>RF01062;MIR812;AP003347.3/33179-33351 39947:Oryza sativa Japonica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct: 125 aaattattatttaatttatttgtgacttactttattatctatagtactttaagcacaact 66
Query: 146 tttcattttttatattt 162
|||||||||||||||||
Sbjct: 65 tttcattttttatattt 49
>RF01062;MIR812;AAAA02027640.1/6344-6172 39946:Oryza sativa Indica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||||||||||||||| | || ||||| ||||||
Sbjct: 126 aaattattatttattttatttgtgacttactttattatctacagtattttaaatataact 67
Query: 146 tttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgttaca 202
||| |||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 66 ttttattttttatatttgtaaaagaaatttgaataagacgagtggtcaaacgttaca 10
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttga-ccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01006032.1/3007-2837 39947:Oryza sativa Japonica
Group
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 136/165 (82%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| | |||||||||||||| |||||||||||||||| |||||||||| ||
Sbjct: 171 gtttttacatgtaacgtttgacc-actcgtcttattcaaatttttttgaaattattattt 113
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||||||||||||||||| ||||||||| | |||||||| || ||||||| ||||||||
Sbjct: 112 attttatttgtgacttac--tattatctacagtactttaaacacaactttttatttttta 55
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaacgttaca 202
||||||| |||||||||| |||||||||||||||||
Sbjct: 54 tatttgcaaaaaaaaactgaataagacgagtggtcaaacgttaca 10
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaa 210
|||||||||||| |||||||||||||||||||||||||
Sbjct: 133 tttgaataagacgagtggtcaaacgttacatgtaaaaa 170
Score = 52.0 bits (26), Expect = 4e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattca 75
||||||| ||||||||||||| ||||||||||||||||
Sbjct: 1 gtttttgattgtaacgtttga-ccactcgtcttattca 37
>RF01062;MIR812;AACV01022178.1/41655-41482 39947:Oryza sativa
Japonica Group
Length = 174
Score = 113 bits (57), Expect = 1e-24
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||| ||| |||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 126 aaatttttatttattttatttgtggcttactttattatccaaaatactttaagcataact 67
Query: 146 tttcattttttatattt 162
|||| ||||||||||||
Sbjct: 66 tttcgttttttatattt 50
>RF01062;MIR812;AACV01011247.1/5926-6098 39947:Oryza sativa Japonica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 133/162 (82%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||||||||||||||||||| |||||||||||| || ||| ||||| ||
Sbjct: 173 gtttttgcttgtaacgtttgact-actcgtcttatttaattttttaaaaaaatattattt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||| | | |||||||||| |||||||||||||| |
Sbjct: 114 attttatttgtgacttactttattatccacagtactttaagcgcaacttttcatttttga 55
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaacgtt 199
||||||| |||||||||||| ||||||||||||||
Sbjct: 54 tatttgcaaaaaaattttgaataagacgagtggtcaaacgtt 13
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttga-ccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01004534.1/3266-3096 39947:Oryza sativa Japonica
Group
Length = 171
Score = 111 bits (56), Expect = 5e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| |||||||||||||||||||||||||| |||| | ||||||||||| |||
Sbjct: 125 gaaattattatttattttatttgtgacttactttattgtctacagtactttaagcacaac 66
Query: 145 ttttcattttttatatttgc 164
||||| ||||||||||||||
Sbjct: 65 ttttcgttttttatatttgc 46
Score = 48.1 bits (24), Expect = 6e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttatt 73
||||||| ||||||||||||| ||||||||||||||
Sbjct: 1 gtttttgattgtaacgtttga-ccactcgtcttatt 35
>RF01062;MIR812;AAAA02004443.1/24290-24120 39946:Oryza sativa Indica
Group
Length = 171
Score = 111 bits (56), Expect = 5e-24
Identities = 107/125 (85%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||| ||||||||||||||| | || ||||||||||| ||||||||| ||
Sbjct: 171 gtttttgtttgtaacgtttgaccaa-tcatcttattcaaaaaaatttaaaattattattt 113
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||
Sbjct: 112 attttatttgtgacttactttattatccacggtactttaagtataacttttcatttttta 53
Query: 158 tattt 162
|||||
Sbjct: 52 tattt 48
>RF01062;MIR812;AAAA02025478.1/24577-24748 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 136/165 (82%), Gaps = 2/165 (1%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| |||| ||| ||||||| |||||||||||| ||| |||||||||| ||
Sbjct: 172 gtttttacttgcaacatttgacc-actcgtcttatttaaaattttttgaaattattattt 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||| ||||||||||||| ||||| ||||||||||||| |||||||| |||||||
Sbjct: 113 attttatttatgacttactttat-atctacaatactttaagcacaacttttcgtttttta 55
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaacgttaca 202
||||||| ||| |||||||| |||| ||||||||||||
Sbjct: 54 tatttgcaaaaaaaatttaaataagacgagtgatcaaacgttaca 10
>RF01062;MIR812;AAAA02020519.1/16817-16988 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 107/125 (85%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatta 98
||||||||||||||||| |||| |||||| ||||||||| |||||||||| |||
Sbjct: 171 tttttgcttgtaacgttggacc-actcgttttattcaaaattttttgaaattattattta 113
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 158
|||||||||||||||||||||||||| | | ||||||||||| ||||||| ||||| ||
Sbjct: 112 ttttatttgtgacttactttattatccacagtactttaagcacaactttttgtttttaat 53
Query: 159 atttg 163
|||||
Sbjct: 52 atttg 48
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacc 60
|||||||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgacc 23
>RF01062;MIR812;AAAA02003779.1/4099-3929 39946:Oryza sativa Indica
Group
Length = 171
Score = 111 bits (56), Expect = 5e-24
Identities = 107/125 (85%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatta 98
|||||||||||||||||||||| |||||||||||| ||| ||||||||| |||
Sbjct: 170 tttttgcttgtaacgtttgacc-actcgtcttatttaaaattttttaaaattattattta 112
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 158
||||||||||||| || ||||||||||| | |||||||| || |||||||| ||||||||
Sbjct: 111 ttttatttgtgacctattttattatctacagtactttaaacacaacttttcgttttttat 52
Query: 159 atttg 163
|||||
Sbjct: 51 atttg 47
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 177 aataagactagtggtcaaacgttacatgtaaaaaa 211
|||||||| ||||||||||||||||| | ||||||
Sbjct: 137 aataagacgagtggtcaaacgttacaagcaaaaaa 171
>RF01062;MIR812;CR855044.1/89288-89120 4530:Oryza sativa (rice)
Length = 169
Score = 111 bits (56), Expect = 5e-24
Identities = 96/112 (85%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||
Sbjct: 125 gaaattattatttattttatttgtgacttactttattatccaaaatacattaagcacaac 66
Query: 145 ttttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaac 196
|||| |||||||||||| | |||||||||||| |||||||||||
Sbjct: 65 tttttgttttttatatttacacaaattttttgaataagacgagtggtcaaac 14
>RF01062;MIR812;AAAA02007162.1/13852-14024 39946:Oryza sativa Indica
Group
Length = 173
Score = 111 bits (56), Expect = 5e-24
Identities = 107/125 (85%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 40 ttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaattat 99
||||| ||||||||||||||| |||||||||||| ||| |||||||||| ||||
Sbjct: 171 ttttgtttgtaacgtttgacc-actcgtcttatttaaaaatttttgaaattattatttat 113
Query: 100 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 159
||||| ||||||||||||||||||||| | ||||||||| | ||||||| |||||||||
Sbjct: 112 tttatctgtgacttactttattatctacagtactttaagtgtgacttttcgttttttata 53
Query: 160 tttgc 164
|||||
Sbjct: 52 tttgc 48
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 177 aataagactagtggtcaaacgttaca 202
|||||||| |||||||||||||||||
Sbjct: 139 aataagacgagtggtcaaacgttaca 164
>RF01062;MIR812;AP006554.2/116160-116331 39947:Oryza sativa Japonica
Group
Length = 172
Score = 111 bits (56), Expect = 5e-24
Identities = 107/125 (85%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 40 ttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaattat 99
|||||||| ||||||||| | |||||||||||||||| |||||||||||||||
Sbjct: 170 ttttgcttacaacgtttgatc-actcgtcttattcaaatttttttgaaattattaattat 112
Query: 100 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 159
|||||||||||||| |||||||| || | ||||||||||| ||||||| ||||||||||
Sbjct: 111 tttatttgtgacttcatttattatttacagtactttaagcacaactttttattttttata 52
Query: 160 tttgc 164
|||||
Sbjct: 51 tttgc 47
>RF01062;MIR812;AP008207.1/7747472-7747302 39947:Oryza sativa
Japonica Group
Length = 171
Score = 111 bits (56), Expect = 5e-24
Identities = 107/125 (85%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||| ||| ||||||||||| |||| ||||||||||| |||||||||| ||
Sbjct: 171 gtttttgtttgcaacgtttgacc-actcatcttattcaaaattttttgaaattattattt 113
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||| ||||||||||||||||| | | || |||||||| ||||||||||||||||
Sbjct: 112 attttatttatgacttactttattatccacagtattttaagcacaacttttcatttttta 53
Query: 158 tattt 162
|||||
Sbjct: 52 tattt 48
>RF01062;MIR812;AACV01002952.1/2774-2943 39947:Oryza sativa Japonica
Group
Length = 170
Score = 111 bits (56), Expect = 5e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||| ||||||||||||| | | |||||||| ||||||
Sbjct: 125 gaaattattatttattttatttgtgatttactttattatccacagtactttaaacataac 66
Query: 145 ttttcattttttatatttgc 164
||||||||||||||||||||
Sbjct: 65 ttttcattttttatatttgc 46
>RF01058;MIR806;AAAA02019268.1/24292-24529 39946:Oryza sativa Indica
Group
Length = 238
Score = 111 bits (56), Expect = 5e-24
Identities = 118/140 (84%), Gaps = 1/140 (0%)
Strand = Plus / Plus
Query: 106 tgtgacttactttattatctaaaatactttaagcataacttttcattttttatatttgcn 165
|||||||| |||||||||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 99 tgtgacttgctttattatccaaagtactttaagcataacttttcgttttttatatttgca 158
Query: 166 nnnnnnntttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttat 225
|||||||||||| ||||||||||| | || | ||||| ||||||| ||||||
Sbjct: 159 caaattttttgaataagacgagtggtcaaacagtgcaag-aaaaactcaaaatcccttat 217
Query: 226 attgtgggacagagggagta 245
||| |||||| |||||||||
Sbjct: 218 attatgggacggagggagta 237
Score = 77.8 bits (39), Expect = 7e-14
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| |||||||||||||||||| ||||||| |||| | |||||| |||
Sbjct: 238 gtactccctccgtcccataatataagggattttgagttttt-cttgcactgtttga-cca 181
Query: 63 ctcgtcttattcaaa 77
|||||||||||||||
Sbjct: 180 ctcgtcttattcaaa 166
>RF01058;MIR806;AC129719.2/23163-23401 39947:Oryza sativa Japonica
Group
Length = 239
Score = 111 bits (56), Expect = 5e-24
Identities = 197/244 (80%), Gaps = 7/244 (2%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
||||||||||| || |||||||||||||||||| |||||||| ||||| |||||| | |
Sbjct: 1 gtactccctccatcccataatataagggattttgagtttttgtttgtactgtttgatc-a 59
Query: 63 ctcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttatta 122
||||||||||| ||| | |||||||| ||||||| || ||||||||||||||
Sbjct: 60 ctcgtcttattaaaaatatt--ggaattattatttattttttt---gacttactttatta 114
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgc-nnnnnnnntttgaataa 181
|| ||| ||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 115 tccaaagtactttaagcacaacttttcgttttttatatttgcacaaatttttttgaataa 174
Query: 182 gactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggg 241
|| ||||||||||| | || | ||||| ||||||| | ||||||| |||||| |||||
Sbjct: 175 aacgagtggtcaaacagtgcaagcaaaaactcaaaatcctttatattatgggacggaggg 234
Query: 242 agta 245
||||
Sbjct: 235 agta 238
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||| ||||||| |||||||||||| | |||||| ||||
Sbjct: 238 tactccctccgtcccataatataaaggattttgagtttttgcttgcactgtttga-ccac 180
Query: 64 tcgtcttattcaaa 77
|||| |||||||||
Sbjct: 179 tcgttttattcaaa 166
>RF01058;MIR806;AL772417.3/14129-13890 4530:Oryza sativa (rice)
Length = 240
Score = 111 bits (56), Expect = 5e-24
Identities = 135/162 (83%), Gaps = 5/162 (3%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
|||||||||||||| | || ||||||||||||| | ||||||||| | |||||||| |
Sbjct: 1 gtactccctccgtcccctagtataagggattttgacattttgcttgcactgtttgacc-a 59
Query: 63 ctcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttatta 122
|||||||||||||| |||||||||| ||||||| || |||||||||||||
Sbjct: 60 ttcgtcttattcaaaaaattttgaaattattatttattttttt----acttactttatta 115
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgc 164
|| ||| |||||||||||||||| ||||||||||||||||||
Sbjct: 116 tccaaagtactttaagcataactcttcattttttatatttgc 157
Score = 52.0 bits (26), Expect = 4e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| | |||||||||||||||| | ||||||| | | |||||| ||||
Sbjct: 239 tactccctccgtcccttaatataagggattttgatattttgctcgcactgtttga-ccac 181
Query: 64 tcgtcttattcaaa 77
|| |||||||||||
Sbjct: 180 tcatcttattcaaa 167
>RF01058;MIR806;AAAA02032415.1/3027-2786 39946:Oryza sativa Indica
Group
Length = 242
Score = 111 bits (56), Expect = 5e-24
Identities = 133/160 (83%), Gaps = 1/160 (0%)
Strand = Plus / Plus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 84 aattattatttattttatttgtgacttactttattatccaaagtactttaagctcaactt 143
Query: 147 ttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgttacatgta 206
||| ||||| |||||||| ||| |||||||| ||||||||||| | || |||
Sbjct: 144 ttcgtttttgatatttgcacatatttttt-aataagacgagtggtcaaacagtgcaagta 202
Query: 207 aaaaatcaaaataccttatattgtgggacagagggagtag 246
||| |||||||| |||||||| ||||| ||||||||||
Sbjct: 203 aaatatcaaaatctcttatattaggggacggagggagtag 242
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 206 aaaaaatcaaaataccttatattgtgggacagagggagta 245
|||| |||||||| ||||||||| |||||||||||||||
Sbjct: 41 aaaatatcaaaatcccttatattaggggacagagggagta 2
Score = 44.1 bits (22), Expect = 0.001
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| | ||||||||| |||||| | |||| |||| | |||||| ||||
Sbjct: 241 tactccctccgtcccctaatataagagattttgatattttacttgcactgtttga-ccac 183
Query: 64 tcgtcttatt 73
||||||||||
Sbjct: 182 tcgtcttatt 173
>RF01062;MIR812;AAAA02004566.1/9745-9575 39946:Oryza sativa Indica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||| ||||||||||||| | | |||||||| |||||||
Sbjct: 125 aaattattatttattttatttgtgatttactttattatccatagtactttaaacataact 66
Query: 146 tttcattttttatatttgc 164
|||||||||||||||||||
Sbjct: 65 tttcattttttatatttgc 47
>RF01062;MIR812;AAAA02032712.1/11653-11824 39946:Oryza sativa Indica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||||||||||||||||||||||||||||||||||| | |||||||| || ||||
Sbjct: 125 aaattattaattattttatttgtgacttactttattatctacagtactttaaacacaact 66
Query: 146 tttcattttttatatttgc 164
||| |||||||| ||||||
Sbjct: 65 ttttattttttagatttgc 47
>RF01062;MIR812;AL662934.3/50208-50378 39947:Oryza sativa Japonica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||| ||||||||||||||||||| | ||||||||||| ||||
Sbjct: 126 aaattattatttattttatttatgacttactttattatctacagtactttaagcacaact 67
Query: 146 tttcattttttatatttgc 164
|||||||||| ||||||||
Sbjct: 66 tttcatttttcatatttgc 48
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgtt 199
|||||||||||| ||||||||||||||
Sbjct: 133 tttgaataagacaagtggtcaaacgtt 159
>RF01062;MIR812;AAAA02021186.1/45161-45331 39946:Oryza sativa Indica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| |||||||||||||||||||||||||||| || | ||||||||||| ||||
Sbjct: 125 aaattattatttattttatttgtgacttactttattatttacagtactttaagcacaact 66
Query: 146 tttcattttttatatttgc 164
|||| ||||||||||||||
Sbjct: 65 tttcgttttttatatttgc 47
>RF01062;MIR812;AP003871.3/81937-82107 39947:Oryza sativa Japonica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 74/79 (93%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||||||||||||||||||| | ||||||||| | |||
Sbjct: 126 gaaattattatttattttatttgtgacttactttattatctacagtactttaag-acaac 68
Query: 145 ttttcattttttatatttg 163
|||||||||||||||||||
Sbjct: 67 ttttcattttttatatttg 49
>RF01062;MIR812;AL713939.6/126032-126207 4530:Oryza sativa (rice)
Length = 176
Score = 109 bits (55), Expect = 2e-23
Identities = 110/128 (85%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||| ||| ||||||||||| ||||||||| |||||| |||||||| | ||
Sbjct: 176 gtttttgtttgcaacgtttgacc-actcgtcttgttcaaaattttttgaaattatcattt 118
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttc-atttttt 156
||||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||
Sbjct: 117 attttatttgtgacttactttattatctacagtactttaagcacaacttttcgttttttt 58
Query: 157 atatttgc 164
||||||||
Sbjct: 57 atatttgc 50
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaa 76
||||||||||| | ||||||||| |||||||||||||||
Sbjct: 1 gtttttgcttgcagcgtttgacc-actcgtcttattcaa 38
>RF01062;MIR812;AAAA02006568.1/7398-7226 39946:Oryza sativa Indica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||||||||||||||||||| | ||||||| ||| |||
Sbjct: 127 gaaattattatttattttatttgtgacttactttattatctacattactttatgcacaac 68
Query: 145 ttttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgtt 199
|||| |||||||||||||| |||||||||||| |||||| |||||||
Sbjct: 67 tttttgttttttatatttgcaaaaaaaatttgaataagacgagtggttaaacgtt 13
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||| ||||||| ||| ||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttaacc-actcgtcttattcaaa 39
>RF01062;MIR812;AP006523.2/118080-118251 39947:Oryza sativa Japonica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||| ||||||||||||||| | |||||||| |||||||
Sbjct: 125 aaattattatttattttatttgtgaattactttattatctacagtactttaatcataact 66
Query: 146 tttcattttttatatttgc 164
|||| ||||||||||||||
Sbjct: 65 tttcgttttttatatttgc 47
>RF01062;MIR812;AAAA02008793.1/16167-16338 39946:Oryza sativa Indica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 61 cactcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttat 120
||||||||||||||||| | |||||||| ||||||| ||||||||||||||||
Sbjct: 150 cactcgtcttattcaaaaaaacttggaattattatttatttttattgtgacttactttat 91
Query: 121 tatctaaaatactttaagcataacttttcattttttatatttgc 164
|||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct: 90 tatccaaagtactttaagcacaacttttcattttttatatttgc 47
>RF01062;MIR812;AP004727.2/137063-136892 39947:Oryza sativa Japonica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
||||||||||||||||||||||||||||||||||||||| || | || |||||||| |||
Sbjct: 127 gaaattattaattattttatttgtgacttactttattatttacagtattttaagcacaac 68
Query: 145 ttttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgtt 199
|||| |||||||||||||| |||||||||||| |||| |||||||||
Sbjct: 67 tttttgttttttatatttgcaaaaaaaatttgaataagacgagtgatcaaacgtt 13
>RF01062;MIR812;AP008215.1/17764414-17764585 39947:Oryza sativa
Japonica Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 126 aaattattatttattttatttgtgacttactttattatacaaagtactttaagcataact 67
Query: 146 tttcattttttatatttgc 164
|||| || |||||||||||
Sbjct: 66 tttcgttgtttatatttgc 48
>RF01062;MIR812;AL663019.2/48460-48289 39947:Oryza sativa Japonica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 106/124 (85%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||||||| |||||||||||| |||||||||||||| ||||||||| ||
Sbjct: 172 gtttttgcttataacgtttgacctt-tcgtcttattcaaaaaattttaaaattattattt 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||
Sbjct: 113 attttatttgtgacttactttattatctacagtactttaagcacaactttttgtttttta 54
Query: 158 tatt 161
||||
Sbjct: 53 tatt 50
>RF01062;MIR812;AAAA02000325.1/25603-25434 39946:Oryza sativa Indica
Group
Length = 170
Score = 107 bits (54), Expect = 7e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 126 aaattattatttattttatttgtgactgtctttattatctaaagtactttaagcataact 67
Query: 146 tttcattttttatatttg 163
||| |||||||||||||
Sbjct: 66 ttttgttttttatatttg 49
>RF01062;MIR812;AAAA02005674.1/20425-20258 39946:Oryza sativa Indica
Group
Length = 168
Score = 107 bits (54), Expect = 7e-23
Identities = 105/123 (85%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 40 ttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaattat 99
|||| |||||||||||||||| |||||||||||| ||| ||||||||| ||||
Sbjct: 166 ttttacttgtaacgtttgacc-actcgtcttatttaaatttttttaaaattattatttat 108
Query: 100 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 159
|||||||||||||||||||||||| || | ||||| ||||| ||||||| ||||||||||
Sbjct: 107 tttatttgtgacttactttattatgtatagtacttcaagcacaactttttattttttata 48
Query: 160 ttt 162
|||
Sbjct: 47 ttt 45
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 177 aataagactagtggtcaaacgttacatgtaaaa 209
|||||||| ||||||||||||||||| ||||||
Sbjct: 134 aataagacgagtggtcaaacgttacaagtaaaa 166
>RF01062;MIR812;AAAA02031835.1/1391-1563 39946:Oryza sativa Indica
Group
Length = 173
Score = 107 bits (54), Expect = 7e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| |||||||||||||||||||||||||||| ||| ||||||||||| |||||
Sbjct: 124 aattattatttattttatttgtgacttactttattatacaaagtactttaagcacaactt 65
Query: 147 ttcattttttatatttgc 164
||| ||||||||||||||
Sbjct: 64 ttcgttttttatatttgc 47
>RF01062;MIR812;AACV01010066.1/9500-9324 39947:Oryza sativa Japonica
Group
Length = 177
Score = 107 bits (54), Expect = 7e-23
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||| || |||||||||||| ||||| ||||||||||| |||||
Sbjct: 125 aattattatttattttatttatggcttactttattacctaaagtactttaagcacaactt 66
Query: 147 ttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaac 196
||| |||||||||||||| |||||||||||| |||||||||||
Sbjct: 65 ttcgttttttatatttgcacaaattttttgaataagacgagtggtcaaac 16
>RF01062;MIR812;AAAA02011350.1/21929-21758 39946:Oryza sativa Indica
Group
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 108/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||| ||| ||||||||||| |||||||||||||||| |||||||||| ||
Sbjct: 172 gtttttgtttgcaacgtttgacc-actcgtcttattcaaaatttgttgaaattattattt 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||||||||||||||||||||| |||||| | ||||| | || |||||||| |||||||
Sbjct: 113 attttatttgtgacttactttactatctacagtacttccaccacaacttttcgtttttta 54
Query: 158 tatttgc 164
|||||||
Sbjct: 53 tatttgc 47
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgtt 199
|||||||||||| ||||||||||||||
Sbjct: 134 tttgaataagacgagtggtcaaacgtt 160
>RF01062;MIR812;AAAA02016979.1/20786-20614 39946:Oryza sativa Indica
Group
Length = 173
Score = 107 bits (54), Expect = 7e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||||||||||||||||||||| ||||| ||| | |||||
Sbjct: 125 aattattatttattttatttgtgacttactttattatctaaagtacttaaagtacaactt 66
Query: 147 ttcattttttatatttgc 164
|| |||||||||||||||
Sbjct: 65 tttattttttatatttgc 48
>RF01062;MIR812;AAAA02027427.1/13502-13329 39946:Oryza sativa Indica
Group
Length = 174
Score = 107 bits (54), Expect = 7e-23
Identities = 101/118 (85%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 127 aaattattatttattttatttgtgacttactttattatctaccgtactttaagcataact 68
Query: 146 tttcatttt-ttatatttgcnnnnnnnntttgaataagactagtggtcaaacgttaca 202
|||| |||| | |||||||| ||| |||||||| |||||||||||||||||
Sbjct: 67 tttcgttttctaatatttgcaaaaaaaatttaaataagacgagtggtcaaacgttaca 10
Score = 48.1 bits (24), Expect = 6e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttatt 73
||||||| ||||||||||||| ||||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttga-ccactcgtcttatt 35
>RF01062;MIR812;AACV01015146.1/17582-17413 39947:Oryza sativa
Japonica Group
Length = 170
Score = 107 bits (54), Expect = 7e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| |||||||||||||||||||||||||||| || ||||||||||||| |||
Sbjct: 124 gaaattattatttattttatttgtgacttactttattatatataatactttaagcacaac 65
Query: 145 ttttcattttttatattt 162
|||| ||||||||||||
Sbjct: 64 tttttgttttttatattt 47
Score = 56.0 bits (28), Expect = 2e-07
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttatt 73
||||||||||||||||||||| ||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttga-ccactcgtcttatt 35
>RF01062;MIR812;AACV01022520.1/58374-58200 39947:Oryza sativa
Japonica Group
Length = 175
Score = 107 bits (54), Expect = 7e-23
Identities = 110/129 (85%), Gaps = 4/129 (3%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| ||||||||||||| || |||||||||||||||| |||||||||||||
Sbjct: 175 gtttttacttgtaacgtttgtcc-actcgtcttattcaaatttttttgaaattattaatt 117
Query: 98 attttatttgtgacttactttattatc---taaaatactttaagcataacttttcatttt 154
|||||||||||||||||||||||||| || | ||||||||||| || ||||| ||||
Sbjct: 116 attttatttgtgacttactttattattatatacagtactttaagcacaatttttcgtttt 57
Query: 155 ttatatttg 163
|||||||||
Sbjct: 56 ttatatttg 48
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttga-ccactcgtcttattcaaa 39
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaa 210
|||||||||||| ||||| ||||||||||| |||||||
Sbjct: 137 tttgaataagacgagtggacaaacgttacaagtaaaaa 174
>RF01062;MIR812;AAAA02010127.1/41698-41525 39946:Oryza sativa Indica
Group
Length = 174
Score = 107 bits (54), Expect = 7e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||| ||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 125 aattattatttattttctttgtgacttactttattatccaatgtactttaagcataattt 66
Query: 147 ttcattttttatatttgc 164
||||||||||||||||||
Sbjct: 65 ttcattttttatatttgc 48
>RF01062;MIR812;AACV01013528.1/595-423 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 7e-23
Identities = 97/114 (85%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||||||||||||| | |||||||| || ||||
Sbjct: 126 aaattattatttattttatttgtgacttactttattatccacggtactttaaacacaact 67
Query: 146 tttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgtt 199
|||| |||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 66 tttcgttttttatatttgcaaaaaaaatttgaataagacgagtggtcaaacgtt 13
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttga-ccactcgtcttattcaaa 39
>RF01062;MIR812;AP003616.4/66392-66223 39947:Oryza sativa Japonica
Group
Length = 170
Score = 107 bits (54), Expect = 7e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||||||||||||||||||||| |||| |||||| |||||
Sbjct: 124 aattattatttattttatttgtgacttactttattatctaaagtactctaagcacaactt 65
Query: 147 ttcattttttatatttgc 164
||||| ||||||||||||
Sbjct: 64 ttcat-ttttatatttgc 48
>RF01062;MIR812;AC121365.2/113520-113348 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 7e-23
Identities = 130/159 (81%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||||||||| | | ||||||||||||||||| |||||||||| ||
Sbjct: 173 gtttttgcttgtaacgtcttaaccactcgtcttattcaattttttttgaaattatta-tt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||| |||| |||||||||||||||||| | |||||| |||| |||||||| |||||||
Sbjct: 114 attttgtttgagacttactttattatctacagtactttgagcacaacttttcgtttttta 55
Query: 158 tatttgcnnnnnnnntttgaataagactagtggtcaaac 196
|||||| |||||||||||| |||||||||||
Sbjct: 54 tatttggaaaaaaaatttgaataagacgagtggtcaaac 16
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||| || |||||||| ||||||||||||||||
Sbjct: 1 gtttttgcttgcaatgtttgacc-actcgtcttattcaaa 39
>RF01062;MIR812;AAAA02033452.1/2719-2889 39946:Oryza sativa Indica
Group
Length = 171
Score = 107 bits (54), Expect = 7e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 125 aaattattatttattttatttgtgacttactttattatccaaagtactttaagcacaact 66
Query: 146 tttcattttttatatttg 163
||| |||||||||||||
Sbjct: 65 ttttgttttttatatttg 48
>RF01062;MIR812;AC138002.3/110336-110507 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 98/114 (85%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| |||||
Sbjct: 123 aattattatttattttatttgtgacttactttattatccaaagtactttaagcacaactt 64
Query: 147 ttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgtta 200
||| ||||||||||||| || ||||||||| |||||||||||||||
Sbjct: 63 ttc-gtttttatatttgcacaaatttttagaataagacgagtggtcaaacgtta 11
>RF01062;MIR812;AP004262.2/8297-8125 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 7e-23
Identities = 117/143 (81%)
Strand = Plus / Minus
Query: 60 ccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttacttta 119
|||||||||||||||||| |||| ||||| |||||||||||||||| |||||||
Sbjct: 152 ccactcgtcttattcaaatttttttgaaactattatttattttatttgtgacatacttta 93
Query: 120 ttatctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaat 179
||||||| | ||||||||||| || ||||| ||||||||||||| ||||||
Sbjct: 92 ttatctacagtactttaagcacaaattttcggtttttatatttgcaaaaaaaaattgaat 33
Query: 180 aagactagtggtcaaacgttaca 202
||||| |||||||||||||||||
Sbjct: 32 aagacgagtggtcaaacgttaca 10
Score = 52.0 bits (26), Expect = 4e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaa 76
|||| ||||||||||||||| |||||||||||||||||
Sbjct: 2 ttttcgcttgtaacgtttga-ccactcgtcttattcaa 38
>RF01062;MIR812;AC137744.2/2192-2020 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 7e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||| | |||||||| |||||||||||||||||||||||||| |||||
Sbjct: 125 aattattatttattttttctgtgacttgctttattatctaaaatactttaagcacaactt 66
Query: 147 ttcattttttatatttgc 164
||| ||||||||||||||
Sbjct: 65 ttcgttttttatatttgc 48
>RF01062;MIR812;AP005807.3/11576-11404 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 7e-23
Identities = 97/114 (85%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||| ||| ||||||||||||||| | || |||||||||||||
Sbjct: 126 aaattattatttattttatttatgatttactttattatctacagtattttaagcataact 67
Query: 146 tttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgtt 199
|||| |||| ||||||||| |||||||||||| ||||||||||||||
Sbjct: 66 tttcgttttatatatttgcaaaaagaatttgaataagacgagtggtcaaacgtt 13
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 1 gttttcgcttgaaacgtttgacc-actcgtcttattcaaa 39
>RF01062;MIR812;AAAA02020988.1/38602-38431 39946:Oryza sativa Indica
Group
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||| ||||||||||||||||| |||||||| || |||||
Sbjct: 124 aattattatttattttatttgtgatttactttattatctaaagtactttaaacacaactt 65
Query: 147 ttcattttttatatttgc 164
||| ||||||||||||||
Sbjct: 64 ttcgttttttatatttgc 47
>RF01062;MIR812;AC145127.1/200726-200898 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 7e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 125 aattattatttatttt-tttgtgacttactttattatctaaagtactttaagcacaactt 67
Query: 147 ttcattttttatatttgc 164
||| ||||||||||||||
Sbjct: 66 ttcgttttttatatttgc 49
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 107 bits (54), Expect = 7e-23
Identities = 152/187 (81%), Gaps = 2/187 (1%)
Strand = Plus / Plus
Query: 60 ccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttacttta 119
|||||||||||||||||| | |||||||| ||||||| ||||||||||||||||
Sbjct: 49 ccactcgtcttattcaaaaaagtatggaattattatttatttt-tttgtgacttacttta 107
Query: 120 ttatctaaaatactttaagcataacttttcattttttatatttgc-nnnnnnnntttgaa 178
||||||||| ||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 108 ttatctaaagtactttaagcacaacttgtcgttttttatatttgcacatttttttttgaa 167
Query: 179 taagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacaga 238
|||||| ||||||||| | | || | ||||| ||||||| | ||||||| |||||| ||
Sbjct: 168 taagacgagtggtcaaccagtgcaagcaaaaactcaaaatccgttatattatgggacgga 227
Query: 239 gggagta 245
|||||||
Sbjct: 228 gggagta 234
Score = 75.8 bits (38), Expect = 3e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||| ||||||| |||||||||||| | | |||| ||||
Sbjct: 234 tactccctccgtcccataatataacggattttgagtttttgcttgcactggttga-ccac 176
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 175 tcgtcttattcaaa 162
>RF01062;MIR812;AAAA02002551.1/6491-6321 39946:Oryza sativa Indica
Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||||||||
Sbjct: 125 aaattattatttattttatttgtgacttaatttattatctacagtactttaagcataact 66
Query: 146 tttcattttttatattt 162
||| | |||||||||||
Sbjct: 65 ttttaatttttatattt 49
>RF01062;MIR812;AAAA02001658.1/683-852 39946:Oryza sativa Indica
Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 88/102 (86%)
Strand = Plus / Minus
Query: 61 cactcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttat 120
||||||||||||||||| |||||||||| ||||||||||||||||||| |||||
Sbjct: 148 cactcgtcttattcaaaaaattttgaaattattatttattttatttgtgacttaatttat 89
Query: 121 tatctaaaatactttaagcataacttttcattttttatattt 162
|||||| | ||||||||||| ||||||| ||||||||||||
Sbjct: 88 tatctacattactttaagcacaactttttgttttttatattt 47
>RF01062;MIR812;AAAA02011276.1/7207-7036 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 107/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| |||||||||||||| | |||||||||||||||| ||| ||||| ||
Sbjct: 172 gtttttacttgtaacgtttgatc-actcgtcttattcaaatttttttaaaactattattt 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | |||||||||| |||||||| | |||||
Sbjct: 113 attttatttgtgacttactttattatctacagaactttaagcacaacttttcgtctttta 54
Query: 158 tatttg 163
||||||
Sbjct: 53 tatttg 48
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaa 210
|||||||||||| |||| |||||||||||| |||||||
Sbjct: 134 tttgaataagacgagtgatcaaacgttacaagtaaaaa 171
>RF01062;MIR812;AAAA02034323.1/17590-17763 39946:Oryza sativa Indica
Group
Length = 174
Score = 105 bits (53), Expect = 3e-22
Identities = 107/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||| ||||| |||||||| ||| ||| |||||||||||| |||||||||| ||
Sbjct: 174 gtttctgcttataacgtttaacc-acttgtcttattcaaaaatttttgaaattattattt 116
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||| ||||||||||||||| | ||||||||||| ||||||| ||||||||
Sbjct: 115 attttatttgtgatttactttattatctacagtactttaagcacaactttttatttttta 56
Query: 158 tatttg 163
|||||
Sbjct: 55 aatttg 50
>RF01062;MIR812;AACV01003520.1/10218-10389 39947:Oryza sativa
Japonica Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 107/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| |||| ||||||||||| |||||||||||||||| ||| ||||| |
Sbjct: 172 gtttttacttgcaacgtttgacc-actcgtcttattcaaatttttttaaaaatattatta 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||||
Sbjct: 113 tttttatttgtgacttactttattatctacagtactttaagcacaacttttcgtttttta 54
Query: 158 tatttg 163
||||||
Sbjct: 53 tatttg 48
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaa 210
|||||||||||| |||||||||||||| || |||||||
Sbjct: 134 tttgaataagacgagtggtcaaacgttgcaagtaaaaa 171
Score = 44.1 bits (22), Expect = 0.001
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaa 76
|||||||||| ||||||||| ||||| |||||||||||
Sbjct: 2 tttttgcttgcaacgtttga-ccacttgtcttattcaa 38
>RF01062;MIR812;AAAA02034457.1/5030-5202 39946:Oryza sativa Indica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 125 aattattatttattttatttgtgacttactttattatccacggtactttaagcataactt 66
Query: 147 ttcattttttatatttg 163
||| |||||||||||||
Sbjct: 65 ttcgttttttatatttg 49
>RF01062;MIR812;AAAA02009039.1/27863-28030 39946:Oryza sativa Indica
Group
Length = 168
Score = 105 bits (53), Expect = 3e-22
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 108 tgacttactttattatctaaaatactttaagcataacttttcattttttatatttgcnnn 167
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 104 tgacttactttattatctaaattactttaagcacaacttttcattttttatatttgcacg 45
Query: 168 nnnnntttgaataagactagtggtcaaac 196
|||||||||||| |||||||||||
Sbjct: 44 aattttttgaataagacgagtggtcaaac 16
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||||| |||||||| ||||||||||||||||
Sbjct: 1 gtttttgcttgtactgtttgacc-actcgtcttattcaaa 39
>RF01062;MIR812;AACV01016974.1/17663-17832 39947:Oryza sativa
Japonica Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 95/111 (85%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||| || |||||||||||||||| ||||||||||||||| |||
Sbjct: 124 gaaattattatttattttttt---gacttactttattatccaaaatactttaagcacaac 68
Query: 145 ttttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaa 195
|||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 67 ttttcattttttatatttgcacaaattttttgaataagacgagtggtcaaa 17
>RF01062;MIR812;AAAA02000165.1/13009-12838 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 94/109 (86%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||| ||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 124 aattattatttacttt-tttgtgacttactttattatctaaaatactttaagcgcaactt 66
Query: 147 ttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaa 195
||| |||||||||||||| |||||||||||| ||||||||||
Sbjct: 65 ttcgttttttatatttgcacaaattttttgaataagacgagtggtcaaa 17
>RF01058;MIR806;AAAA02000839.1/35471-35708 39946:Oryza sativa Indica
Group
Length = 238
Score = 105 bits (53), Expect = 3e-22
Identities = 136/162 (83%), Gaps = 8/162 (4%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||| | ||| | |||||||| ||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttt-gattgcactgtttgacc-ac 59
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgt-gacttactttatta 122
|||||||||||||| ||| ||||||||| |||| | ||||||||||||||
Sbjct: 60 tcgtcttattcaaaaaagttagaa-----taattatttaattttttgacttactttatta 114
Query: 123 tctaaaatactttaagcataacttttcattttttatatttgc 164
|||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 115 tctaaagtactttaagcacaacttttcgttttttatatttgc 156
Score = 52.0 bits (26), Expect = 4e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||| |||||||||| |||||| | ||| | |||||| ||||
Sbjct: 237 tactccctccgtcctataatacaagggattttgagttttagtttgcattgtttga-ccac 179
Query: 64 tcgtcttattcaaa 77
|| |||||||||||
Sbjct: 178 tcatcttattcaaa 165
>RF01062;MIR812;AAAA02000336.1/19369-19541 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 93/108 (86%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| |||||||||||||||||| |||||||||| ||| ||||||||||| |||||
Sbjct: 124 aattattatttattttatttgtgactt-ctttattatccaaagtactttaagcacaactt 66
Query: 147 ttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaa 194
||| |||||||||||||| |||||||||||| |||||||||
Sbjct: 65 ttcgttttttatatttgcacaaattttttgaataagacgagtggtcaa 18
>RF01062;MIR812;AAAA02022102.1/84641-84470 39946:Oryza sativa Indica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 106/125 (84%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||| ||| ||| ||||||| |||| ||||||||||| |||||||||| ||
Sbjct: 172 gtttttgtttgcaacatttgacc-actcatcttattcaaaaatttttgaaattattattt 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||| ||||||||||| | || |||||||| |||||||| |||||||
Sbjct: 113 attttatttgtgacttaatttattatctatagtattttaagcacaacttttcgtttttta 54
Query: 158 tattt 162
|||||
Sbjct: 53 tattt 49
Score = 48.1 bits (24), Expect = 6e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttatt 73
||||||||||||||||||||| || |||||||||||
Sbjct: 1 gtttttgcttgtaacgtttga-ccgctcgtcttatt 35
>RF01062;MIR812;AACV01018648.1/1053-1225 39947:Oryza sativa Japonica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 91/105 (86%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 60 ccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttacttta 119
|||||||||||||||||| | |||||||| ||||||| ||||||||||||||||
Sbjct: 152 ccactcgtcttattcaaaaaagtatggaattattatttatttt-tttgtgacttacttta 94
Query: 120 ttatctaaaatactttaagcataacttttcattttttatatttgc 164
||||| ||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 93 ttatccaaagtactttaagcacaacttgtcattttttatatttgc 49
>RF01062;MIR812;AAAA02007308.1/8874-8706 39946:Oryza sativa Indica
Group
Length = 169
Score = 103 bits (52), Expect = 1e-21
Identities = 106/125 (84%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||| |||||| |||||||||| |||||||||||||||| ||||||||| ||
Sbjct: 169 gtttgtgcttgcgacgtttgacc-actcgtcttattcaaatttttttaaaattattattt 111
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||
Sbjct: 110 attttatttgtgacttactttattatctatagtactttaagcacaactttttgtttttta 51
Query: 158 tattt 162
||||
Sbjct: 50 cattt 46
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgt 198
|||||||||||| |||||||||||||
Sbjct: 131 tttgaataagacgagtggtcaaacgt 156
>RF01062;MIR812;AAAA02034956.1/41821-41993 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||| |||||||||||||||| ||| |||||||| ||||||
Sbjct: 127 gaaattattatttattttatttctgacttactttattattcaaagtactttaaacataac 68
Query: 145 ttttcattttttatatttgc 164
|||| |||||||||||||||
Sbjct: 67 tttttattttttatatttgc 48
>RF01062;MIR812;AAAA02016451.1/15963-15791 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| |||||||||||||||||||||||||||| ||| ||||||||||| |||||
Sbjct: 125 aattattatttattttatttgtgacttactttattattcaaagtactttaagcacaactt 66
Query: 147 ttcattttttatattt 162
||| ||||||||||||
Sbjct: 65 ttcgttttttatattt 50
>RF01062;MIR812;AC144558.1/139667-139494 39947:Oryza sativa Japonica
Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||||||||||||||||||||||||||||||||||| | | |||||| || |||
Sbjct: 128 gaaattattaattattttatttgtgacttactttattatctacagttctttaaacacaac 69
Query: 145 ttttcattttttatatttgc 164
||||| ||||||| ||||||
Sbjct: 68 ttttcgttttttagatttgc 49
Score = 48.1 bits (24), Expect = 6e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttatt 73
|||||||||||||||||||| ||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttg-gccactcgtcttatt 35
>RF01058;MIR806;AAAA02000336.1/19576-19334 39946:Oryza sativa Indica
Group
Length = 243
Score = 103 bits (52), Expect = 1e-21
Identities = 93/108 (86%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| |||||||||||||||||| |||||||||| ||| ||||||||||| |||||
Sbjct: 85 aattattatttattttatttgtgactt-ctttattatccaaagtactttaagcacaactt 143
Query: 147 ttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaa 194
||| |||||||||||||| |||||||||||| |||||||||
Sbjct: 144 ttcgttttttatatttgcacaaattttttgaataagacgagtggtcaa 191
Score = 44.1 bits (22), Expect = 0.001
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||| | | |||||||||||||||| | |||| |||| | | |||| ||||
Sbjct: 242 tactccctccgccccctaatataagggattttgacattttccttgcactgattga-ccac 184
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 183 tcgtcttattcaaa 170
>RF01062;MIR812;AACV01023991.1/981-810 39947:Oryza sativa Japonica
Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 109/128 (85%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||
Sbjct: 172 gtttttgcttgtaacatttgacc-actcgtcttattcaaaattttttaaaattattattt 114
Query: 98 attttatttgtgactt-actttattatctaaaatactttaagcataacttttcatttttt 156
|||||||||||||||| | ||||||||||| | || |||||||| ||||||| ||||||
Sbjct: 113 attttatttgtgactttaatttattatctacagtattttaagcacaactttttattttta 54
Query: 157 atatttgc 164
||||||||
Sbjct: 53 atatttgc 46
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttaca 202
|||||||||||| |||||||||| ||||||
Sbjct: 134 tttgaataagacgagtggtcaaatgttaca 163
>RF01062;MIR812;AACV01010498.1/7513-7684 39947:Oryza sativa Japonica
Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||| ||||||||||||||||||| | |||||||||| ||||
Sbjct: 126 aaattattatttattttatttatgacttactttattatctatagtactttaagcgcaact 67
Query: 146 tttcattttttatatttgc 164
|||| ||||||||||||||
Sbjct: 66 tttcgttttttatatttgc 48
>RF01062;MIR812;AP003770.3/133836-133664 39947:Oryza sativa Japonica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| |||||||||||||||||||||| |||| | ||| || |||||||||||||
Sbjct: 126 aaattattatttattttatttgtgacttacttgattacccaaagtattttaagcataact 67
Query: 146 tttcattttttatatttgc 164
|||| ||||||||||||||
Sbjct: 66 tttcgttttttatatttgc 48
>RF01062;MIR812;AAAA02003871.1/18852-18687 39946:Oryza sativa Indica
Group
Length = 166
Score = 101 bits (51), Expect = 5e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 94 aattattttatttgtgacttactttattatctaaaatactttaagcataacttttcattt 153
||||||||| ||||||||||||||||||||| ||| ||||||||||| || |||||||||
Sbjct: 119 aattattttttttgtgacttactttattatccaaagtactttaagcacaaattttcattt 60
Query: 154 tttatatttgc 164
|||||||||||
Sbjct: 59 tttatatttgc 49
>RF01062;MIR812;AP004330.3/32219-32048 39947:Oryza sativa Japonica
Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||||||||||||||||||| ||| ||||||||||| | || ||||||||||||
Sbjct: 126 gaaattattaattattttatttgtgatttaatttattatctacagtattttaagcataac 67
Query: 145 ttttcattttttatatttg 163
||||| ||||||||||||
Sbjct: 66 ttttcggtttttatatttg 48
>RF01062;MIR812;AAAA02022100.1/1294-1126 39946:Oryza sativa Indica
Group
Length = 169
Score = 101 bits (51), Expect = 5e-21
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||| |||
Sbjct: 124 aaattattatttatttt-tttatgacttactttattatctaaagtactttaagcatgact 66
Query: 146 tttcattttttatatttgc 164
|||| ||||||||||||||
Sbjct: 65 tttcgttttttatatttgc 47
>RF01062;MIR812;AC210470.1/112176-112011 4538:Oryza glaberrima
(African rice)
Length = 166
Score = 101 bits (51), Expect = 5e-21
Identities = 89/103 (86%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 94 aattattttatttgtgacttactttattatctaaaatactttaagcataacttttcattt 153
||||||||| ||| ||||||||||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 117 aattatttttttt-tgacttactttattatctaaagtactttaagcacaactttttattt 59
Query: 154 tttatatttgcnnnnnnnntttgaataagactagtggtcaaac 196
||||||||||| |||||||||||| |||||||||||
Sbjct: 58 tttatatttgcacaaattttttgaataagacgagtggtcaaac 16
>RF01062;MIR812;AACV01020435.1/10345-10175 39947:Oryza sativa
Japonica Group
Length = 171
Score = 101 bits (51), Expect = 5e-21
Identities = 72/78 (92%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||
Sbjct: 123 aattattatttattttttttg--atttactttattatctaaaatactttaagcataactt 66
Query: 147 ttcattttttatatttgc 164
||| ||||||||||||||
Sbjct: 65 ttcgttttttatatttgc 48
>RF01062;MIR812;AP003450.3/144108-144282 39947:Oryza sativa Japonica
Group
Length = 175
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 90 tattaattattttatttgtgacttactttattatctaaaatactttaagcataacttttc 149
||||| ||||||||||||||||||||||||||||||| | ||||||||||| |||||||
Sbjct: 123 tattatttattttatttgtgacttactttattatctacagtactttaagcacaacttttt 64
Query: 150 attttttatatttgc 164
||||||||||||||
Sbjct: 63 gttttttatatttgc 49
>RF01062;MIR812;AP005541.3/92329-92157 39947:Oryza sativa Japonica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 91/107 (85%)
Strand = Plus / Minus
Query: 90 tattaattattttatttgtgacttactttattatctaaaatactttaagcataacttttc 149
||||| ||||||||||||||||||| ||||||||| ||| || ||||||||||||||||
Sbjct: 122 tattatttattttatttgtgacttaatttattatccaaagtattttaagcataacttttt 63
Query: 150 attttttatatttgcnnnnnnnntttgaataagactagtggtcaaac 196
|||||||||| |||| |||||||||||| |||||||||||
Sbjct: 62 attttttataattgcacaaattttttgaataagacgagtggtcaaac 16
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaa 77
|||||||||||| |||||||| ||||||||||||||||
Sbjct: 2 tttttgcttgtattgtttgacc-actcgtcttattcaaa 39
>RF01062;MIR812;AAAA02022058.1/13808-13644 39946:Oryza sativa Indica
Group
Length = 165
Score = 101 bits (51), Expect = 5e-21
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 110 acttactttattatctaaaatactttaagcataacttttcattttttatatttgcnnnnn 169
||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 102 acttactttattatccaaaatactttaagcacaacttttcattttttatatttgcataaa 43
Query: 170 nnntttgaataagactagtggtcaaac 196
|||||||||||| |||||||||||
Sbjct: 42 tattttgaataagacgagtggtcaaac 16
>RF01062;MIR812;AAAA02000177.1/14304-14475 39946:Oryza sativa Indica
Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||||||||||||||| || |||||||||||||||| | || |||||||| |||
Sbjct: 126 gaaattattaattattttatttatggcttactttattatctacagtattttaagcacaac 67
Query: 145 ttttcattttttatatttg 163
||||| |||||||||||||
Sbjct: 66 ttttcgttttttatatttg 48
Score = 54.0 bits (27), Expect = 1e-06
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaa 76
|||||||||| |||||||||| |||||||||||||||||
Sbjct: 1 gtttttgcttctaacgtttga-ccactcgtcttattcaa 38
>RF01062;MIR812;AACV01002034.1/7389-7217 39947:Oryza sativa Japonica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||| ||||||||| | | ||||||||||| ||||
Sbjct: 126 aaattattatttattttatttgtgacttattttattatccacagtactttaagcacaact 67
Query: 146 tttcattttttatatttgc 164
|||| ||||||||||||||
Sbjct: 66 tttcgttttttatatttgc 48
>RF01062;MIR812;AACV01005559.1/51073-50902 39947:Oryza sativa
Japonica Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 gaaattattatttattttatttgtgacttactttattatctacggtactttaagcataac 67
Query: 145 ttttcattttttatatttg 163
|||| ||||||| |||||
Sbjct: 66 tttttgttttttacatttg 48
>RF01062;MIR812;AAAA02017733.1/16042-16214 39946:Oryza sativa Indica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct: 126 aaattattatttattttatttgtgacttattttattatctaccgtactttaagtataact 67
Query: 146 tttcattttttatatttgc 164
|||| ||||||||||||||
Sbjct: 66 tttcgttttttatatttgc 48
>RF01058;MIR806;AAAA02003871.1/18652-18886 39946:Oryza sativa Indica
Group
Length = 235
Score = 101 bits (51), Expect = 5e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 94 aattattttatttgtgacttactttattatctaaaatactttaagcataacttttcattt 153
||||||||| ||||||||||||||||||||| ||| ||||||||||| || |||||||||
Sbjct: 83 aattattttttttgtgacttactttattatccaaagtactttaagcacaaattttcattt 142
Query: 154 tttatatttgc 164
|||||||||||
Sbjct: 143 tttatatttgc 153
Score = 52.0 bits (26), Expect = 4e-06
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||| ||||||| | ||||| ||| | |||||| ||||
Sbjct: 234 tactccctccgtcccataatataa-ggattttgacattttggttgcactgtttga-ccac 177
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 176 tcgtcttattcaaa 163
>RF01058;MIR806;ABRL01000391.1/1735-1498 65489:Oryza barthii
Length = 238
Score = 101 bits (51), Expect = 5e-21
Identities = 193/243 (79%), Gaps = 8/243 (3%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||| |||||||| ||||||||||| |||||| ||||||| || |||||||||| ||||
Sbjct: 2 tacttcctccgtcccataatataagagattttgagtttttctttataacgtttga-ccac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| |||||| || || ||| ||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaattttaaaattagta------ttttttttgacttactttattat 114
Query: 124 ctaaaatactttaagcataacttttcattttttatattt-gcnnnnnnnntttgaataag 182
||| |||||||||| | |||||||| |||||||||||| | ||||||||||
Sbjct: 115 ctacgatactttaagaacaacttttcgttttttatatttggaaaaaaaaatttgaataag 174
Query: 183 actagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 242
|| ||| |||||||||| || ||||| ||||||| ||||||||| |||||| ||||||
Sbjct: 175 acgagtagtcaaacgttgcaatgaaaaactcaaaatcccttatattatgggacggaggga 234
Query: 243 gta 245
|||
Sbjct: 235 gta 237
Score = 83.8 bits (42), Expect = 1e-15
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||| | ||
Sbjct: 237 tactccctccgtcccataatataagggattttgagtttttcattgcaacgtttga-ctac 179
Query: 64 tcgtcttattcaaa 77
||||||||||||||
Sbjct: 178 tcgtcttattcaaa 165
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||||||| | ||||| ||||||| |||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacgttataaagaaaaactcaaaatctcttatattatgg 15
Query: 233 gacagagggagtag 246
||| |||| |||||
Sbjct: 14 gacggaggaagtag 1
>RF01062;MIR812;AAAA02013220.1/9377-9208 39946:Oryza sativa Indica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 158
|||| ||||||||||||||||||||| ||| | |||||||||||||||||| ||||||||
Sbjct: 113 ttttttttgtgacttactttattatccaaagtgctttaagcataacttttcgttttttat 54
Query: 159 atttgcnnnnnnnntttgaataagactagtggtcaaac 196
|||||| |||||||||||| |||||||||||
Sbjct: 53 atttgcacaaattttttgaataagacgagtggtcaaac 16
>RF01062;MIR812;AAAA02011117.1/4184-4354 39946:Oryza sativa Indica
Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| ||| |
Sbjct: 125 aattattatttattttatttgtgacttactttattatccaaagtactttaagcacaacct 66
Query: 147 ttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaac 196
|| |||||||||||| | |||||||||||| |||||||||||
Sbjct: 65 tttgttttttatatttacacaaattttttgaataagacgagtggtcaaac 16
Score = 44.1 bits (22), Expect = 0.001
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 40 ttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||| |||||||| ||||||||||||||||
Sbjct: 3 ttttgcttgtactgtttgacc-actcgtcttattcaaa 39
>RF01062;MIR812;AAAA02017490.1/3538-3366 39946:Oryza sativa Indica
Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 102/119 (85%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||||| |||||||| |||||||||||||||| | |||||||| ||
Sbjct: 173 gtttttgcttgtattgtttgacc-actcgtcttattcaaaaatttttggaattattattt 115
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttt 156
||||| ||| ||||||||||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 114 atttt-tttatgacttactttattatccaaaatactttaagcataatttttcttttttt 57
>RF01062;MIR812;AP005698.3/85213-85385 39947:Oryza sativa Japonica
Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||||||||||||||||| | | ||||||||||| |||||
Sbjct: 125 aattattatttattttatttgtgacttactttattatccacagtactttaagcacaactt 66
Query: 147 ttcattttttatatttgc 164
||||| ||||||||||||
Sbjct: 65 ttcat-ttttatatttgc 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgtt 199
|||||||||||| ||||||||||||||
Sbjct: 135 tttgaataagacgagtggtcaaacgtt 161
>RF01062;MIR812;CT831424.1/569-741 39946:Oryza sativa Indica Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 106/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| |||||||||||||||||| |||||||||||| ||||| ||||| ||||
Sbjct: 125 aaattattatttattttatttgtgacttgctttattatctaccgtacttgaagcacaact 66
Query: 146 tttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgttacatgt 205
|||| |||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct: 65 tttcgttttttatatttgcaaaaaaaa-ttgaataagacgagtggtcaaacgttacaaat 7
Query: 206 aaaaaa 211
||||||
Sbjct: 6 aaaaaa 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 46 ttgtaacgtttgacccactcgtcttattcaa 76
||||||||||||||| |||||||||||||||
Sbjct: 9 ttgtaacgtttgacc-actcgtcttattcaa 38
>RF01062;MIR812;AAAA02011349.1/24079-23906 39946:Oryza sativa Indica
Group
Length = 174
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||||||||||||||||||| | |||||||| | |||
Sbjct: 126 gaaattattatttattttatttgtgacttactttattatctacagtactttaaacgcaac 67
Query: 145 ttttcattttttatattt 162
||||| ||||||||||||
Sbjct: 66 ttttcgttttttatattt 49
Score = 54.0 bits (27), Expect = 1e-06
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaa 76
||||||||||||||||||||| ||| |||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttga-ccattcgtcttattcaa 38
>RF01062;MIR812;AAAA02029081.1/4555-4382 39946:Oryza sativa Indica
Group
Length = 174
Score = 99.6 bits (50), Expect = 2e-20
Identities = 107/127 (84%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||| || |||||||| |||||||||||||||| |||| ||||||||
Sbjct: 174 gtttttgcttgcaatgtttgacc-actcgtcttattcaaatttttttgaaactattaatt 116
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||| ||||||||||||||||||| | ||||||||| | || |||| |||| ||
Sbjct: 115 attttatttttgacttactttattatctacagtactttaagtacaaatttttgttttgta 56
Query: 158 tatttgc 164
|||||||
Sbjct: 55 tatttgc 49
Score = 56.0 bits (28), Expect = 2e-07
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttatt 73
||||||||||||||||||||| ||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttga-ccactcgtcttatt 35
>RF01062;MIR812;AC091246.8/135795-135624 39947:Oryza sativa Japonica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| || ||
Sbjct: 125 aattattatttattttatctgtgacttactttattatctaaagtactttaagcacaattt 66
Query: 147 ttcattttttatatttgc 164
||| ||||||||| ||||
Sbjct: 65 ttcgttttttataattgc 48
>RF01062;MIR812;AAAA02008540.1/15529-15363 39946:Oryza sativa Indica
Group
Length = 167
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/77 (92%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 120 aattattatttattttttttg--acttactttattatccaaaatactttaagcataactt 63
Query: 147 ttcattttttatatttg 163
||| |||||||||||||
Sbjct: 62 ttcgttttttatatttg 46
>RF01062;MIR812;AP008218.1/11279875-11280047 39947:Oryza sativa
Japonica Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 125 aattattatttattttatttgtgacttactttattatccaaagtactttaagctcaactt 66
Query: 147 ttcattttttatatttgc 164
||| ||||| ||||||||
Sbjct: 65 ttcgtttttgatatttgc 48
>RF01062;MIR812;AC025905.3/49075-49245 4530:Oryza sativa (rice)
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||||||||||||||||||| | || |||||||| |||
Sbjct: 125 gaaattattatttattttatttgtgacttactttattatctacagtattttaagcacaac 66
Query: 145 ttttcattttttatattt 162
|||| |||||| ||||||
Sbjct: 65 tttttatttttaatattt 48
>RF01062;MIR812;AACV01010637.1/22787-22956 39947:Oryza sativa
Japonica Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 95 attattttatttgtgacttactttattatctaaaatactttaagcataacttttcatttt 154
|||||||| ||||||||||||||||||||| ||||||||||||||| |||||| | ||||
Sbjct: 118 attattttgtttgtgacttactttattatccaaaatactttaagcacaactttccgtttt 59
Query: 155 ttatatttgc 164
||||||||||
Sbjct: 58 ttatatttgc 49
>RF01058;MIR806;AP008212.1/22380588-22380348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 99.6 bits (50), Expect = 2e-20
Identities = 192/242 (79%), Gaps = 3/242 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| ||||||||||| | |||||| ||||
Sbjct: 240 tactccctccgtcccataatataagggattttgagtttttgcttacagtgtttga-ccac 182
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| | |||||||| ||| || ||| | |||||||||| |||
Sbjct: 181 tcgtcttattcaaaaagttttgtaattattatttactt--ttttttacttactttactat 124
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| ||||||||||| || |||| ||| |||||||||||||| ||| |||||||
Sbjct: 123 ccaaaatactttacacacaactattcgttttttatatttgcataaattttttaaataaga 64
Query: 184 ctagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 243
||||||||||| | | | ||||| | ||||| ||||||||| |||||| |||||||
Sbjct: 63 tgagtggtcaaacactgtaagcaaaaacttaaaatcccttatattatgggacggagggag 4
Query: 244 ta 245
||
Sbjct: 3 ta 2
Score = 79.8 bits (40), Expect = 2e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgctt 47
||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttaagtttttgctt 45
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| ||||||||||| | | | ||||| ||||||| ||||||||| |||
Sbjct: 168 tttgaataagacgagtggtcaaacactgtaagcaaaaactcaaaatcccttatattatgg 227
Query: 233 gacagagggagta 245
||| |||||||||
Sbjct: 228 gacggagggagta 240
>RF01058;MIR806;AACV01004826.1/22071-22312 39947:Oryza sativa
Japonica Group
Length = 242
Score = 99.6 bits (50), Expect = 2e-20
Identities = 129/158 (81%)
Strand = Plus / Plus
Query: 88 attattaattattttatttgtgacttactttattatctaaaatactttaagcataacttt 147
||||||| |||||||||||||||||||||||||||| ||| ||||||||| | ||||||
Sbjct: 84 attattatttattttatttgtgacttactttattattcaaagtactttaagtacaacttt 143
Query: 148 tcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgttacatgtaa 207
|| |||||||||||||| ||| |||||||| ||||||||||| | || | ||
Sbjct: 144 tcgttttttatatttgcacaaaatttttaaataagacgagtggtcaaacagtgcaagcaa 203
Query: 208 aaaatcaaaataccttatattgtgggacagagggagta 245
|| ||||||| ||||||||| |||| |||||||||
Sbjct: 204 aatgtcaaaatcccttatattaggggatggagggagta 241
Score = 54.0 bits (27), Expect = 1e-06
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgaccca 62
||||||||||| || | |||||||||||||||| | ||||||||| | |||||| |||
Sbjct: 242 gtactccctccatcccctaatataagggattttgacattttgcttgcactgtttga-cca 184
Query: 63 ctcgtcttatt 73
|||||||||||
Sbjct: 183 ctcgtcttatt 173
>RF00906;MIR1122;AAAA02004418.1/2515-2382 39946:Oryza sativa
Indica Group
Length = 134
Score = 99.6 bits (50), Expect = 2e-20
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||
Sbjct: 5 tactccctccgtctcataatataagtgattttgagtttttgcttgcaacgtttga-ccac 63
Query: 64 tcgtcttatt 73
||||||||||
Sbjct: 64 tcgtcttatt 73
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 188 tggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagtag 246
|||||||||||| || ||||||| ||||||| |||||||||||||||| ||||||||||
Sbjct: 73 tggtcaaacgttgcaagtaaaaactcaaaatcccttatattgtgggacggagggagtag 131
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacc 60
||||||||||||| || ||||||||||||||| ||||||| |||| |||||||||||
Sbjct: 130 tactccctccgtcccacaatataagggattttgagtttttacttgcaacgtttgacc 74
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 177 aataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggaca 236
|||||||| |||||||||||||| || | ||||| ||||||| |||||||| || |||
Sbjct: 73 aataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcacttatattatgagacg 14
Query: 237 gagggagta 245
|||||||||
Sbjct: 13 gagggagta 5
>RF01062;MIR812;AP004810.3/106040-105868 39947:Oryza sativa Japonica
Group
Length = 173
Score = 97.6 bits (49), Expect = 7e-20
Identities = 80/93 (86%)
Strand = Plus / Minus
Query: 104 tttgtgacttactttattatctaaaatactttaagcataacttttcattttttatatttg 163
||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||
Sbjct: 108 tttgtgacttactttattatccaaagtactttaagcacaacttttcgttttttatatttg 49
Query: 164 cnnnnnnnntttgaataagactagtggtcaaac 196
| |||||||||||| |||||||||||
Sbjct: 48 cacaaattttttgaataagacgagtggtcaaac 16
>RF01062;MIR812;AAAA02009328.1/252-82 39946:Oryza sativa Indica
Group
Length = 171
Score = 97.6 bits (49), Expect = 7e-20
Identities = 109/127 (85%), Gaps = 3/127 (2%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||||||||| |||||||| |||| ||||||||||| |||||||||| ||
Sbjct: 171 gtttttgcttgtactgtttgacc-actcttcttattcaaaaatttt-gaaattattattt 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
|||| |||| ||||||||||||||||| ||| |||||||||||||| ||||| |||||||
Sbjct: 113 attt-atttttgacttactttattatccaaattactttaagcataatttttcttttttta 55
Query: 158 tatttgc 164
|||||||
Sbjct: 54 tatttgc 48
>RF01062;MIR812;AC145127.1/1589042-1588874 39947:Oryza sativa
Japonica Group
Length = 169
Score = 97.6 bits (49), Expect = 7e-20
Identities = 86/101 (85%)
Strand = Plus / Minus
Query: 96 ttattttatttgtgacttactttattatctaaaatactttaagcataacttttcattttt 155
||||||| ||| ||||||||||||||||| ||| ||||||||||||| |||||||||||
Sbjct: 116 ttattttttttttgacttactttattatccaaagtactttaagcatattttttcattttt 57
Query: 156 tatatttgcnnnnnnnntttgaataagactagtggtcaaac 196
||||||||| |||||||||||| |||||||||||
Sbjct: 56 tatatttgcataaattttttgaataagacaagtggtcaaac 16
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgttaca 202
|||||||||||| |||||||||||| ||||
Sbjct: 131 tttgaataagacgagtggtcaaacggtaca 160
>RF01062;MIR812;AAAA02007928.1/15883-15712 39946:Oryza sativa Indica
Group
Length = 172
Score = 97.6 bits (49), Expect = 7e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| |||||||||||||||||||||||||||| || | || ||||| |||||||
Sbjct: 125 aaattattatttattttatttgtgacttactttattatttacagtattttaaacataact 66
Query: 146 tttcattttttatattt 162
||| |||||||||||||
Sbjct: 65 ttttattttttatattt 49
>RF01062;MIR812;AP004038.2/116802-116640 39947:Oryza sativa Japonica
Group
Length = 163
Score = 97.6 bits (49), Expect = 7e-20
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 108 tgacttactttattatctaaaatactttaagcataacttttcattttttatatttgcnnn 167
||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct: 104 tgacttactttattatccaaagtactttaagcacaacttttcattttttatatttgcaca 45
Query: 168 nnnnntttgaataagactagtggtcaaac 196
|||||||||||| |||||||||||
Sbjct: 44 aattttttgaataagacgagtggtcaaac 16
>RF01062;MIR812;AAAA02015781.1/367-537 39946:Oryza sativa Indica
Group
Length = 171
Score = 97.6 bits (49), Expect = 7e-20
Identities = 107/126 (84%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 39 tttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatta 98
|||||| ||| ||| ||||||| |||||||||||||||| |||||||||| |||
Sbjct: 170 tttttgtttgcaacatttgacc-actcgtcttattcaaaaaattttgaaattattattta 112
Query: 99 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 158
|||||||||||||||||||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 111 ttttatttgtgacttactttattatctaccgtattttaagcacaa-ttttcgttttttat 53
Query: 159 atttgc 164
||||||
Sbjct: 52 atttgc 47
>RF01062;MIR812;AACV01007311.1/13690-13517 39947:Oryza sativa
Japonica Group
Length = 174
Score = 97.6 bits (49), Expect = 7e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
|||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||
Sbjct: 127 aaattattttttattttatttgtgacttactttattatccaaagaactttaagcacaact 68
Query: 146 tttcattttttatattt 162
|||| ||||||||||||
Sbjct: 67 tttcgttttttatattt 51
>RF01062;MIR812;AP008218.1/12955264-12955092 39947:Oryza sativa
Japonica Group
Length = 173
Score = 97.6 bits (49), Expect = 7e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||
Sbjct: 125 aattattatttattttatttgtgacttactttattatccaaagcactttaaatataactt 66
Query: 147 ttcattttttatatttg 163
|| ||||||||||||||
Sbjct: 65 tttattttttatatttg 49
>RF01062;MIR812;AACV01002654.1/12821-12650 39947:Oryza sativa
Japonica Group
Length = 172
Score = 97.6 bits (49), Expect = 7e-20
Identities = 106/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| |||| ||| ||||||| |||||||||||||||| ||||||||| ||
Sbjct: 172 gttttttcttgcaacatttgacc-actcgtcttattcaaaaaaaatttaaattattattt 114
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||||||||||||| | | |||||||| |||||||| |||||||
Sbjct: 113 attttatttgtgacttactttattatctacagtgttttaagcacaacttttcgtttttta 54
Query: 158 tatttg 163
| ||||
Sbjct: 53 tttttg 48
>RF01062;MIR812;AP003974.3/44511-44684 39947:Oryza sativa Japonica
Group
Length = 174
Score = 97.6 bits (49), Expect = 7e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 88 attattaattattttatttgtgacttactttattatctaaaatactttaagcataacttt 147
||||||| ||||||||||| ||||||||||||||||| ||| || ||| |||| ||||||
Sbjct: 124 attattatttattttatttatgacttactttattatccaaagtattttcagcacaacttt 65
Query: 148 tcattttttatatttgc 164
|||||||||||||||||
Sbjct: 64 tcattttttatatttgc 48
>RF01062;MIR812;AL606621.3/36682-36853 39947:Oryza sativa Japonica
Group
Length = 172
Score = 97.6 bits (49), Expect = 7e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 88 attattaattattttatttgtgacttactttattatctaaaatactttaagcataacttt 147
||||||| |||||||||||||||||| |||||||||||| | | |||||| |||||||||
Sbjct: 123 attattatttattttatttgtgacttcctttattatctatatttctttaaacataacttt 64
Query: 148 tcattttttatatttgc 164
|| ||||||||||||||
Sbjct: 63 tcgttttttatatttgc 47
>RF01062;MIR812;AP008217.1/8072956-8072786 39947:Oryza sativa
Japonica Group
Length = 171
Score = 97.6 bits (49), Expect = 7e-20
Identities = 73/80 (91%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||| |||| ||||||||||||||| ||| |||||||||||||||
Sbjct: 125 gaaattattatttattttttttg--acttactttattatccaaagtactttaagcataac 68
Query: 145 ttttcattttttatatttgc 164
||||| ||||||||||||||
Sbjct: 67 ttttcgttttttatatttgc 48
>RF01058;MIR806;AC097368.3/118507-118267 39947:Oryza sativa Japonica
Group
Length = 241
Score = 97.6 bits (49), Expect = 7e-20
Identities = 155/193 (80%), Gaps = 3/193 (1%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||| |||||| ||||||| |||| | |||||| | ||
Sbjct: 2 tactccctccgtcctataatataagagattttgagtttttacttgcactgtttgatc-ac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 123
|||||||||||||| | |||||||| ||||||| ||| | ||||||||||||
Sbjct: 61 tcgtcttattcaaaaaattttggaattattatttatttttttta--aattactttattat 118
Query: 124 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 183
| ||| ||||||||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 119 ccaaagtactttaagcacaacttttcgttctttatatttgcacaaattttttgaataaga 178
Query: 184 ctagtggtcaaac 196
| |||||||||||
Sbjct: 179 cgagtggtcaaac 191
Score = 67.9 bits (34), Expect = 6e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 12 ccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccactcgtctta 71
||||| ||||||||||| |||||||||||||||||| | |||||| ||||||||||||
Sbjct: 232 ccgtcccataatataagagattttaagtttttgcttacattgtttga-ccactcgtctta 174
Query: 72 ttcaaa 77
||||||
Sbjct: 173 ttcaaa 168
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 232
|||||||||||| |||| |||||| | || ||||||| ||||||| |||||||| | |
Sbjct: 74 tttgaataagacgagtgatcaaacagtgcaagtaaaaactcaaaatctcttatattatag 15
Query: 233 gacagagggagtag 246
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01058;MIR806;AP005460.3/69018-68774 39947:Oryza sativa Japonica
Group
Length = 245
Score = 97.6 bits (49), Expect = 7e-20
Identities = 130/158 (82%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 6 ctccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccactc 65
||||||||||| ||||||||||||||||||||||||||| ||||| |||||| | | ||
Sbjct: 4 ctccctccgtcccataatataagggattttaagtttttgtttgtactgtttga-ctaatc 62
Query: 66 gtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatct 125
|||||||||||| |||||||| ||||||| || ||||||| |||||||||
Sbjct: 63 gtcttattcaaaaaattttagaattattatttatttttcttatgacttagtttattatcc 122
Query: 126 aaaatactttaagcataacttttcattttttatatttg 163
|| | ||||||||| | |||||| |||||||||||||
Sbjct: 123 aatgtgctttaagcacagcttttcgttttttatatttg 160
Score = 81.8 bits (41), Expect = 4e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| |||||||||||||||||| |||||||||||| | |||||| | ||
Sbjct: 244 tactccctccgtcccataatataagggattttgagtttttgcttgcactgtttga-ctac 186
Query: 64 tcgtcttattcaa 76
|||||||||||||
Sbjct: 185 tcgtcttattcaa 173
>RF01062;MIR812;AACV01004780.1/45323-45496 39947:Oryza sativa
Japonica Group
Length = 174
Score = 95.6 bits (48), Expect = 3e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||| ||||||||||||| ||| | ||||||||| |||||
Sbjct: 127 gaaattattatttattttatttatgacttactttatcatccatggtactttaagtataac 68
Query: 145 ttttcattttttatatttgc 164
||||||||||||||||||||
Sbjct: 67 ttttcattttttatatttgc 48
>RF01062;MIR812;AACV01001491.1/2069-2243 39947:Oryza sativa Japonica
Group
Length = 175
Score = 95.6 bits (48), Expect = 3e-19
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttac-tttattatctaaaatactttaagcataa 143
|||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||| ||
Sbjct: 128 gaaattattatttattttatttgtgacttaaatttattatctatagtactttaagcacaa 69
Query: 144 cttttcattttttatatttg 163
||||| ||||||||||||||
Sbjct: 68 ctttttattttttatatttg 49
>RF01062;MIR812;AP004632.3/148714-148539 39947:Oryza sativa Japonica
Group
Length = 176
Score = 95.6 bits (48), Expect = 3e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 85 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 144
|||||||||| ||||||||||||||| || |||||||||| ||||||||||||| |||
Sbjct: 129 gaaattattatttattttatttgtgatttgctttattatccgcaatactttaagcacaac 70
Query: 145 ttttcattttttatatttgc 164
|||| |||||||||||||||
Sbjct: 69 tttttattttttatatttgc 50
>RF01062;MIR812;AACV01020977.1/6837-7003 39947:Oryza sativa Japonica
Group
Length = 167
Score = 95.6 bits (48), Expect = 3e-19
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 101 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 160
|||||| ||||||||||||||||| ||| ||||||||||| ||||||||||||| |||||
Sbjct: 111 ttatttttgacttactttattatccaaagtactttaagcacaacttttcattttatatat 52
Query: 161 ttgcnnnnnnnntttgaataagactagtggtcaaac 196
|||| |||||||||||| |||||||||||
Sbjct: 51 ttgcacaaatattttgaataagacgagtggtcaaac 16
>RF01062;MIR812;AC135431.2/24077-24247 39947:Oryza sativa Japonica
Group
Length = 171
Score = 95.6 bits (48), Expect = 3e-19
Identities = 105/125 (84%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 40 ttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaattat 99
||||||||||| |||||||| | |||||||||||||| |||||||||| ||||
Sbjct: 169 ttttgcttgtactgtttgacc-attcgtcttattcaaaaaaatttgaaattattatttat 111
Query: 100 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 159
||||||||||||||||||||| | | ||| ||||||||||| |||||| |||||||||
Sbjct: 110 tttatttgtgacttactttataacccaaagtactttaagcacaactttctgttttttata 51
Query: 160 tttgc 164
|||||
Sbjct: 50 tttgc 46
>RF01062;MIR812;AAAA02005657.1/17106-17277 39946:Oryza sativa Indica
Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 89 ttattaattattttatttgtgacttactttattatctaaaatactttaagcataactttt 148
|||||| ||||||||||||| ||||||||||||||| ||| ||||||||||| |||||||
Sbjct: 123 ttattatttattttatttgtaacttactttattatccaaagtactttaagcacaactttt 64
Query: 149 cattttttatatttgc 164
||||||||||||||
Sbjct: 63 tgttttttatatttgc 48
>RF01062;MIR812;AP008217.1/678398-678569 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 104/124 (83%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| |||||||||||||| |||||||||||||| ||| |||||||| ||||| |
Sbjct: 125 aaattattatttattttatttgtgtcttactttattatcgaaagtactttaaacataatt 66
Query: 146 tttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaacgttacatgt 205
|||| ||||||||||||| |||||||||||| ||||||||||| |||| ||
Sbjct: 65 tttc-gtttttatatttgcacaaatattttgaataagacgagtggtcaaacagtacaagt 7
Query: 206 aaaa 209
||||
Sbjct: 6 aaaa 3
>RF01062;MIR812;AAAA02032693.1/4647-4480 39946:Oryza sativa Indica
Group
Length = 168
Score = 95.6 bits (48), Expect = 3e-19
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||| || |||||||||||||||||| ||| |||||||||||||||||
Sbjct: 123 aattattatttatttt-ttggtgacttactttattatccaaattactttaagcataactt 65
Query: 147 ttcattttttatattt 162
||| ||||||||||||
Sbjct: 64 ttcgttttttatattt 49
>RF01062;MIR812;AAAA02018397.1/69188-69020 39946:Oryza sativa Indica
Group
Length = 169
Score = 93.7 bits (47), Expect = 1e-18
Identities = 106/126 (84%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
|||||| |||| ||||||||||| |||||||||||| ||| ||||||||| ||
Sbjct: 169 gtttttacttgcaacgtttgacc-actcgtcttatttaaaaaattttaaaattattattt 111
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||||||||||||||||| ||||||| | || ||||||||||| |||||||||||||
Sbjct: 110 attttatttgtgacttact---ttatctacagtattttaagcataatttttcatttttta 54
Query: 158 tatttg 163
||||||
Sbjct: 53 tatttg 48
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 177 aataagactagtggtcaaacgttacatgtaaaaa 210
|||||||| |||||||||||||| || |||||||
Sbjct: 135 aataagacgagtggtcaaacgttgcaagtaaaaa 168
>RF01062;MIR812;AAAA02023656.1/10695-10858 39946:Oryza sativa Indica
Group
Length = 164
Score = 93.7 bits (47), Expect = 1e-18
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 110 acttactttattatctaaaatactttaagcataacttttcattttttatatttgc 164
||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 104 acttactttattatccaaattactttaagcataacttttcattttttatatttgc 50
>RF01062;MIR812;AAAA02010936.1/30282-30112 39946:Oryza sativa Indica
Group
Length = 171
Score = 93.7 bits (47), Expect = 1e-18
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 86 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 145
||||||||| ||||||||||||||||||||||||||||| | | || ||||||| ||||
Sbjct: 124 aaattattatttattttatttgtgacttactttattatccacagtattttaagcgcaact 65
Query: 146 tttcattttttatatttgc 164
||| |||||||||||||||
Sbjct: 64 ttttattttttatatttgc 46
>RF01062;MIR812;AAAA02019268.1/24495-24327 39946:Oryza sativa Indica
Group
Length = 169
Score = 93.7 bits (47), Expect = 1e-18
Identities = 78/91 (85%)
Strand = Plus / Minus
Query: 106 tgtgacttactttattatctaaaatactttaagcataacttttcattttttatatttgcn 165
|||||||| |||||||||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 106 tgtgacttgctttattatccaaagtactttaagcataacttttcgttttttatatttgca 47
Query: 166 nnnnnnntttgaataagactagtggtcaaac 196
|||||||||||| |||||||||||
Sbjct: 46 caaattttttgaataagacgagtggtcaaac 16
>RF01062;MIR812;AP008213.1/19404924-19404759 39947:Oryza sativa
Japonica Group
Length = 166
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 94 aattattttatttgtgacttactttattatctaaaatactttaagcataacttttcattt 153
||||||| | ||| ||||||||||||||||| ||||||||||||||| ||||||| ||||
Sbjct: 118 aattattatttttttgacttactttattatccaaaatactttaagcacaactttttattt 59
Query: 154 tttatatttgc 164
|||||||||||
Sbjct: 58 tttatatttgc 48
>RF01062;MIR812;AP008218.1/21453608-21453436 39947:Oryza sativa
Japonica Group
Length = 173
Score = 93.7 bits (47), Expect = 1e-18
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 110 acttactttattatctaaaatactttaagcataacttttcattttttatatttgcnnnnn 169
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 102 acttactttattatctaaaatactttaagcgcaacttttcgttttttatatttgcataaa 43
Query: 170 nnntttgaataagactagtggtcaaac 196
|||||||||||| |||||||||||
Sbjct: 42 ttttttgaataagacgagtggtcaaac 16
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
|||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 1 gtttttgcttataatgtttgacc-actcgtcttattcaaa 39
>RF01062;MIR812;AACV01006659.1/3082-3250 39947:Oryza sativa Japonica
Group
Length = 169
Score = 93.7 bits (47), Expect = 1e-18
Identities = 71/78 (91%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||| |||| ||||||||||||||| ||| ||||||||||| |||||
Sbjct: 123 aattattatttattttttttg--acttactttattatccaaagtactttaagcacaactt 66
Query: 147 ttcattttttatatttgc 164
||||||||||||||||||
Sbjct: 65 ttcattttttatatttgc 48
>RF01062;MIR812;AC145322.2/13007-12834 39947:Oryza sativa Japonica
Group
Length = 174
Score = 93.7 bits (47), Expect = 1e-18
Identities = 93/110 (84%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 87 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 146
|||||||| ||||||| |||||||||||||||||||| ||| ||||||||| | |||||
Sbjct: 123 aattattatttatttt--ttgtgacttactttattatccaaagtactttaagtacaactt 66
Query: 147 ttcattttttatatttgcnnnnnnnntttgaataagactagtggtcaaac 196
||| |||||||||||||| |||||||||||| |||||||||||
Sbjct: 65 ttcgttttttatatttgcataaattttttgaataagacgagtggtcaaac 16
Score = 48.1 bits (24), Expect = 6e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaa 77
||||||||||||| |||||||| ||||||||||||||||
Sbjct: 1 gtttttgcttgtactgtttgacc-actcgtcttattcaaa 39
>RF01062;MIR812;AAAA02003081.1/44467-44634 39946:Oryza sativa Indica
Group
Length = 168
Score = 93.7 bits (47), Expect = 1e-18
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 94 aattattttatttgtgacttactttattatctaaaatactttaagcataacttttcattt 153
||||||||| ||||||||||||||||||||| ||| |||| |||||||||||||||||||
Sbjct: 120 aattattttttttgtgacttactttattatccaaagtactgtaagcataacttttcattt 61
Query: 154 ttt 156
|||
Sbjct: 60 ttt 58
>RF01058;MIR806;AAAA02017215.1/4773-5008 39946:Oryza sativa Indica
Group
Length = 236
Score = 93.7 bits (47), Expect = 1e-18
Identities = 196/244 (80%), Gaps = 12/244 (4%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
|||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||
Sbjct: 2 tactccctccgtctcataatataagggattttgagtttttgcttgtactgtttga-ttac 60
Query: 64 tcgtcttattcaaannnnnnngaaattattaattatt-ttatt-tgtgacttactttatt 121
|||||||||| ||| ||||| ||||||| ||||| | |||||||||||||
Sbjct: 61 tcgtcttattaaaa--------aaatttggaattattattattatttgacttactttatg 112
Query: 122 atctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataa 181
||| ||| ||||||||| |||||||| |||||||||||||| ||| |||||
Sbjct: 113 atccaaagtactttaagtgcaacttttcgttttttatatttgcacaattttttt-aataa 171
Query: 182 gactagtggtcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggg 241
||| ||||||||||| |||| ||||| ||||||| ||||||||| | |||| |||||
Sbjct: 172 gacgagtggtcaaacagtacaaacaaaaactcaaaatcccttatattataggacggaggg 231
Query: 242 agta 245
||||
Sbjct: 232 agta 235
Score = 75.8 bits (38), Expect = 3e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccac 63
||||||||||||| ||||||||||||||||| |||||||| ||||| |||||| ||||
Sbjct: 235 tactccctccgtcctataatataagggattttgagtttttgtttgtactgtttga-ccac 177
Query: 64 tcgtcttatt 73
||||||||||
Sbjct: 176 tcgtcttatt 167
>RF01062;MIR812;AAAA02021416.1/40369-40537 39946:Oryza sativa Indica
Group
Length = 169
Score = 91.7 bits (46), Expect = 4e-18
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 50 aacgtttgacccactcgtcttattcaaannnnnnngaaattattaattattttatttgtg 109
||||||||||| |||||||||||||||| ||||| |||| ||||||||||||||
Sbjct: 157 aacgtttgacc-actcgtcttattcaaatttttttgaaatgattatttattttatttgtg 99
Query: 110 acttactttattatctaaaatactttaagcataacttttcattttttatatttgc 164
|||||||||| |||||| | ||||||||||| |||||||| |||||||||||||
Sbjct: 98 acttacttta-tatctacagtactttaagcacaacttttc-gtttttatatttgc 46
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaacgtt 199
|||||||||||| ||||||||||||||
Sbjct: 131 tttgaataagacgagtggtcaaacgtt 157
>RF01062;MIR812;AAAA02033648.1/11539-11708 39946:Oryza sativa Indica
Group
Length = 170
Score = 91.7 bits (46), Expect = 4e-18
Identities = 105/125 (84%), Gaps = 4/125 (3%)
Strand = Plus / Minus
Query: 38 gtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaatt 97
||||||| ||| | ||||||||| |||||||||||| ||| |||||||||| ||
Sbjct: 170 gtttttgtttgcaccgtttgacc-actcgtcttatttaaaaaattttgaaattattattt 112
Query: 98 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 157
||||| || |||||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 111 attttttt---gacttactttattatctaaagtactttaagcacaatttttcatttttta 55
Query: 158 tattt 162
|||||
Sbjct: 54 tattt 50
