miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AP008212.1/23750957-23751199 39947:Oryza sativa
Japonica Group
Length = 243
Score = 262 bits (132), Expect = 2e-69
Identities = 210/241 (87%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 242 tactccctccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccact 183
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgtcttattcaaaaatttttgaaattattaattattttatttgtgacttactttattatc 123
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
|| |||||||||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 122 tacaatactttaagcataacttttcgttttttatatttgcaaaaaaaatttaaataagac 63
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| ||||||||| || | ||||| | ||||| |||||||||||||||| ||||||||
Sbjct: 62 aagtggtcaaacgttgcaagcaaaaactgaaaatcccttatattgtgggacggagggagt 3
Query: 264 a 264
|
Sbjct: 2 a 2
Score = 91.7 bits (46), Expect = 5e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 1 gtactccctccgtcccacaatataagggattttcagtttttgcttgcaacgtttgaccac 60
Query: 83 tcgtcttatt 92
| ||||||||
Sbjct: 61 ttgtcttatt 70
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| ||||||||| || | ||||| ||||||| ||||||||| |||
Sbjct: 170 tttgaataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgg 229
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 230 gacggagggagta 242
>RF01058;MIR806;AAAA02018370.1/12201-12442 39946:Oryza sativa Indica
Group
Length = 242
Score = 234 bits (118), Expect = 6e-61
Identities = 211/243 (86%), Gaps = 3/243 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgtaacgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 cgtcttattcaaatttttta-aaattattaattattttatttgtgacttacttta-tatc 119
Query: 144 taaaatac-tttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
|| | ||| |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 120 tatagtacttttaagcacaacttttcattttttatatttgcaaaaaaaatttgaataaga 179
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| |||| |||||||||||| | ||||| | ||||| |||||||||||||||| |||||||
Sbjct: 180 cgagtggtcaaacgttacaagcaaaaactgaaaatcccttatattgtgggacggagggag 239
Query: 263 tag 265
|||
Sbjct: 240 tag 242
Score = 113 bits (57), Expect = 1e-24
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 241 tactccctccgtcccacaatataagggattttcagtttttgcttgtaacgtttgaccact 182
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 181 cgtcttattcaaa 169
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| |||||||||||| | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacgttacaagcaaaaactcaaaatcccttatattatgg 15
Query: 252 gacagagggagtag 265
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01058;MIR806;AACV01013185.1/13859-13616 39947:Oryza sativa
Japonica Group
Length = 244
Score = 232 bits (117), Expect = 2e-60
Identities = 208/242 (85%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
||||| |||||| |||||||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 2 tactctctccgtcccataatataagggattttgagtttttgctcgtaacgtttaaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cgtcttattcaaatttttttgaaattattaattattttatttgtgacttactttattatc 121
Query: 144 taaaatactttaagcataacttttcattttttatatttgc-nnnnnnnntttgaataaga 202
|| | ||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 122 tacagtactttaagcacaacttttcgttttttatatttgcaaaaaaaattttgaataaga 181
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| |||| ||||||||| || ||||||| | ||||| |||||||||||||||| |||||||
Sbjct: 182 cgagtggtcaaacgttgcaagtaaaaactgaaaatcccttatattgtgggacggagggag 241
Query: 263 ta 264
||
Sbjct: 242 ta 243
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| || ||||||||||||||| ||||||| |||| |||||||||||||
Sbjct: 244 gtactccctccgtcccacaatataagggattttcagtttttacttgcaacgtttgaccac 185
Query: 83 tcgtcttattcaaa 96
||||||||||||||
Sbjct: 184 tcgtcttattcaaa 171
Score = 58.0 bits (29), Expect = 7e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| | ||||||||| | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggttaaacgttacgagcaaaaactcaaaatcccttatattatgg 15
Query: 252 gacagagggagta 264
||| ||| |||||
Sbjct: 14 gacggagagagta 2
>RF01058;MIR806;AP008210.1/16807344-16807107 39947:Oryza sativa
Japonica Group
Length = 238
Score = 214 bits (108), Expect = 5e-55
Identities = 204/241 (84%), Gaps = 5/241 (2%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 237 tactccctccgtcccataatataagggattttgagtttttacttgtatcgtttgaccact 178
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 177 cgtcttattcaaaaatttttaaaattattatttattttatttgtgacttactttattatc 118
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
||| ||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 117 -----tacagtaagcataacttttcgttttttatatttgcaaaaaaaatttgaataagac 63
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| |||||||||||| ||||||| |||||| |||||||||||||||| ||||||||
Sbjct: 62 gagtggtcaaacgttacaagtaaaaacccaaaatcccttatattgtgggacggagggagt 3
Query: 264 a 264
|
Sbjct: 2 a 2
Score = 97.6 bits (49), Expect = 8e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| || ||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 2 tactccctccgtcccacaatataagggattttgggtttttacttgtaacgtttgaccact 61
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 62 cgtcttattcaaa 74
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| ||||||| |||| ||||||| ||||||| ||||||||| |||
Sbjct: 165 tttgaataagacgagtggtcaaacgatacaagtaaaaactcaaaatcccttatattatgg 224
Query: 252 gacagagggagtag 265
||| ||||||||||
Sbjct: 225 gacggagggagtag 238
>RF01058;MIR806;AL731624.3/57538-57775 39947:Oryza sativa Japonica
Group
Length = 238
Score = 214 bits (108), Expect = 5e-55
Identities = 204/241 (84%), Gaps = 5/241 (2%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttacttgtatcgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 62 cgtcttattcaaaaatttttaaaattattatttattttatttgtgacttactttattatc 121
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
||| ||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 122 -----tacagtaagcataacttttcgttttttatatttgcaaaaaaaatttgaataagac 176
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| |||||||||||| ||||||| |||||| |||||||||||||||| ||||||||
Sbjct: 177 gagtggtcaaacgttacaagtaaaaacccaaaatcccttatattgtgggacggagggagt 236
Query: 264 a 264
|
Sbjct: 237 a 237
Score = 97.6 bits (49), Expect = 8e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| || ||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 237 tactccctccgtcccacaatataagggattttgggtttttacttgtaacgtttgaccact 178
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 177 cgtcttattcaaa 165
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| ||||||| |||| ||||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacgatacaagtaaaaactcaaaatcccttatattatgg 15
Query: 252 gacagagggagtag 265
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01058;MIR806;AAAA02020204.1/6387-6629 39946:Oryza sativa Indica
Group
Length = 243
Score = 208 bits (105), Expect = 3e-53
Identities = 206/242 (85%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 2 tactccccccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cgtcttattcaaaattttttgaaattattaattattttatttgtgacttactttattatc 121
Query: 144 taaaatact-ttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
|| |||||| ||||| |||||||||| ||||||||||| | ||| |||||||
Sbjct: 122 tacaatactgttaagtataacttttc-gtttttatatttacaaaaaaaatttaaataaga 180
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| |||| ||||||||| || | ||||| | ||||| |||||||||||||||| |||||||
Sbjct: 181 caagtggtcaaacgttgcaagcaaaaactgaaaatcccttatattgtgggacggagggag 240
Query: 263 ta 264
||
Sbjct: 241 ta 242
Score = 91.7 bits (46), Expect = 5e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 243 gtactccctccgtcccacaatataagggattttcagtttttgcttgcaacgtttgaccac 184
Query: 83 tcgtcttatt 92
| ||||||||
Sbjct: 183 ttgtcttatt 174
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| ||||||||| || | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgg 15
Query: 252 gacagagggagta 264
||| | |||||||
Sbjct: 14 gacggggggagta 2
>RF01062;MIR812;AAAA02000644.1/83237-83065 39946:Oryza sativa Indica
Group
Length = 173
Score = 206 bits (104), Expect = 1e-52
Identities = 152/173 (87%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 173 gtttttgcttgtaacgtttgaccactcgtcttattcaaaattttttgaaattattaatta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 113 ttttatttgtgacatactttattatctaaaatactttaagcataactttttattttttat 54
Query: 178 atttgcnnnnnnnntttgaataagactagtgatcaaacgttacatgtaaaaaa 230
|||||| ||||||||||| |||| ||||| |||||||||||||||
Sbjct: 53 atttgcaaaaaaaaattgaataagacgagtggtcaaatgttacatgtaaaaaa 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 67 tgtaacgtttgaccactcgtcttattcaa 95
|||||| ||||||||||||||||||||||
Sbjct: 10 tgtaacatttgaccactcgtcttattcaa 38
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 204 bits (103), Expect = 5e-52
Identities = 193/228 (84%)
Strand = Plus / Plus
Query: 38 cataatataagggattttaagtttttgcttgtaacgtttgaccactcgtcttattcaaan 97
|||||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||
Sbjct: 15 cataatataagggattttgagtttttgtttgcagcgtttgaccactcgtcttattcaaat 74
Query: 98 nnnnnngaaattattaattattttatttgtgacttactttattatctaaaatactttaag 157
|||||||||| |||||||||||||||||||||||||| |||| | |||||||||
Sbjct: 75 ttttttgaaattattatttattttatttgtgacttactttattgtctacagtactttaag 134
Query: 158 cataacttttcattttttatatttgcnnnnnnnntttgaataagactagtgatcaaacgt 217
|| |||||||| |||||||||||||| |||||||||||| |||| ||||||||
Sbjct: 135 cacaacttttcgttttttatatttgcaaaaaagatttgaataagacgagtggtcaaacgt 194
Query: 218 tacatgtaaaaaatcaaaataccttatattgtgggacagagggagtag 265
| || ||||| ||||||| ||||||||| |||||| ||||||||||
Sbjct: 195 tgcaatcaaaaactcaaaatcccttatattttgggacggagggagtag 242
Score = 97.6 bits (49), Expect = 8e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| || ||||||||||||||| |||||||| ||| ||||||||||||||
Sbjct: 241 tactccctccgtcccaaaatataagggattttgagtttttgattgcaacgtttgaccact 182
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 181 cgtcttattcaaa 169
Score = 50.1 bits (25), Expect = 2e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| ||||||| | || ||||| ||||||| ||||||||| |||
Sbjct: 73 tttgaataagacgagtggtcaaacgctgcaaacaaaaactcaaaatcccttatattatgg 14
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 13 gac-gagggagta 2
>RF01058;MIR806;AL607006.4/105077-105318 4530:Oryza sativa (rice)
Length = 242
Score = 202 bits (102), Expect = 2e-51
Identities = 205/242 (84%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatat-aagggattttaagtttttgcttgtaacgtttgaccac 82
|||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||||
Sbjct: 2 tactccctccgtcccataatattaagggattttgagtttttgcttgcaacgtttgaccac 61
Query: 83 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 62 tcgtcttattcaaaattttttgaaattattatttattttatttgtgacttactttattat 121
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
||| | ||||||||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 122 ctacagtactttaagcacgactttttattttttatatttgcaaaaagaaattgaataaga 181
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| |||| ||||||||| || | ||||| ||||||| ||| ||||||||||| |||||||
Sbjct: 182 cgagtggtcaaacgttgcaagaaaaaactcaaaatccct--tattgtgggacggagggag 239
Query: 263 ta 264
||
Sbjct: 240 ta 241
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 44 ataagggattttaagtttttgcttgtaacgtttgaccactcgtcttattcaa 95
|||||||||||| ||||||| |||| ||||||||||||||||||||||||||
Sbjct: 223 ataagggattttgagttttttcttgcaacgtttgaccactcgtcttattcaa 172
Score = 60.0 bits (30), Expect = 2e-08
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaatacctt-atattgtg 250
|||||||||||| |||| ||||||||| || | ||||| ||||||| |||| ||||| ||
Sbjct: 75 tttgaataagacgagtggtcaaacgttgcaagcaaaaactcaaaatcccttaatattatg 16
Query: 251 ggacagagggagta 264
|||| |||||||||
Sbjct: 15 ggacggagggagta 2
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa Indica
Group
Length = 244
Score = 200 bits (101), Expect = 8e-51
Identities = 204/242 (84%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgtaatgtttgaccact 61
Query: 84 cgtcttattc-aaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||| ||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 62 cgtcttattcaaaatttttttaaaattattatttattttatttgtgacttactttattat 121
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
||| | |||||||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 122 ctatagtactttaagcataattttttgttttttatatttgcaaaaaaaaattgaataaga 181
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| | || ||||||||| || | ||||| ||||||| ||||||||| |||||| |||||||
Sbjct: 182 cgaatggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgggacggagggag 241
Query: 263 ta 264
||
Sbjct: 242 ta 243
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||| |||||||||||| |
Sbjct: 243 tactccctccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccatt 184
Query: 84 cgtcttattcaa 95
||||||||||||
Sbjct: 183 cgtcttattcaa 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| |||||| ||||| | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacattacaagcaaaaactcaaaatcccttatattatgg 15
Query: 252 gacagagggagtag 265
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01058;MIR806;AAAA02030701.1/27339-27098 39946:Oryza sativa Indica
Group
Length = 242
Score = 196 bits (99), Expect = 1e-49
Identities = 142/157 (90%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttggaacgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 62 cgtcttattcaaaagtttt-gaaattattcattattttatttgtgacttactttattatc 120
Query: 144 taaaatactttaagcataacttttcattttttatatt 180
|| | ||||||||||| ||||||||||||||||||||
Sbjct: 121 tatagtactttaagcacaacttttcattttttatatt 157
Score = 81.8 bits (41), Expect = 5e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| || |||||||||||||||||| | |||||| |||||||||||||
Sbjct: 242 gtactccctccgtcccacaatataagggattttaagctactgcttgcaacgtttgaccac 183
Query: 83 tcgtcttattcaa 95
|| ||||||||||
Sbjct: 182 tcatcttattcaa 170
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| ||||||||| || | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacgttccaagcaaaaactcaaaatcccttatattatgg 15
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AACV01007669.1/15429-15672 39947:Oryza sativa
Japonica Group
Length = 244
Score = 194 bits (98), Expect = 5e-49
Identities = 204/243 (83%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||| || |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgcaatgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 62 cgtcttattcaaaaaaatttgaaattattatttattttatttgtgacttactttattatc 121
Query: 144 taaaatactttaagcataacttttcattttttatattt-gcnnnnnnnntttgaataaga 202
|| | || |||||||||||||||| |||||||||||| | |||||||||||
Sbjct: 122 tacagtattttaagcataactttttgttttttatatttggagaaaaaaatttgaataaga 181
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| |||| | ||| ||| || | ||||| ||||||| |||||||||||||||| || ||||
Sbjct: 182 cgagtggttaaatgttgcaagcaaaaactcaaaatcccttatattgtgggacggaaggag 241
Query: 263 tag 265
|||
Sbjct: 242 tag 244
Score = 81.8 bits (41), Expect = 5e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||| ||||| || ||||||||||||||| |||||||||||| ||| ||| ||||||
Sbjct: 243 tactccttccgtcccacaatataagggattttgagtttttgcttgcaacatttaaccact 184
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 183 cgtcttattcaaa 171
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| |||||| || || | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacattgcaagcaaaaactcaaaatcccttatattatgg 15
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AK064773.1/2875-3117 39947:Oryza sativa Japonica
Group
Length = 243
Score = 184 bits (93), Expect = 5e-46
Identities = 201/242 (83%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct: 1 gtactccctccgtcccataatataggggattttgagtttttgcttgtaacgtttgactac 60
Query: 83 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||| || ||| ||||| ||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttatttaattttttaaaaaaatattatttattttatttgtgacttactttattat 120
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
| | | |||||||||| |||||||||||||| |||||||| |||||||||||
Sbjct: 121 ccacagtactttaagcgcaacttttcatttttgatatttgcaaaaaaattttgaataaga 180
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| |||| ||||||||| || | ||||| |||||| ||| |||||||||||| |||||||
Sbjct: 181 cgagtggtcaaacgttgcaagcaaaaactcaaaagccctcatattgtgggacggagggag 240
Query: 263 ta 264
||
Sbjct: 241 ta 242
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| || ||||| |||| |||| |||||||||||| ||||||||||||||
Sbjct: 242 tactccctccgtcccacaatatgagggcttttgagtttttgcttgcaacgtttgaccact 183
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 182 cgtcttattcaaa 170
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 196 aataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggaca 255
|||||||| ||| |||||||||||| | ||||| ||||||| || |||||| ||||||
Sbjct: 70 aataagacgagtagtcaaacgttacaagcaaaaactcaaaatcccctatattatgggacg 11
Query: 256 gagggagta 264
|||||||||
Sbjct: 10 gagggagta 2
>RF01058;MIR806;AP002486.1/27565-27805 39947:Oryza sativa Japonica
Group
Length = 241
Score = 182 bits (92), Expect = 2e-45
Identities = 204/242 (84%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| || ||||||||||||||| ||||||| |||| |||||||||| |||
Sbjct: 2 tactccctccgtcccagaatataagggattttgagtttttacttgcaacgtttgactact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
|||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 62 cgtcttattcaa--tattttgaaattattatttattttatttgtgacttactttattatc 119
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
| | ||||||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 120 cacagtactttaagcacaacttttcgttttttatatttgc-aaaaaaatttgaataagac 178
Query: 204 tagtgatcaaacgttacatgtaaaaaatc-aaaataccttatattgtgggacagagggag 262
|||| |||| ||||||| | ||||| || ||||| |||||||||||||||| |||||||
Sbjct: 179 gagtggtcaagcgttacaagcaaaaactcaaaaatcccttatattgtgggacggagggag 238
Query: 263 ta 264
||
Sbjct: 239 ta 240
Score = 91.7 bits (46), Expect = 5e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggatttta-agtttttgcttgtaacgtttgaccac 82
|||||||||||| || ||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 240 tactccctccgtcccacaatataagggatttttgagtttttgcttgtaacgcttgaccac 181
Query: 83 tcgtcttattcaaa 96
||||||||||||||
Sbjct: 180 tcgtcttattcaaa 167
Score = 71.9 bits (36), Expect = 5e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 193 ttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtggg 252
||||||||||| ||| ||||||||| || ||||||| ||||||| ||||||||| ||||
Sbjct: 73 ttgaataagacgagtagtcaaacgttgcaagtaaaaactcaaaatcccttatattctggg 14
Query: 253 acagagggagta 264
|| |||||||||
Sbjct: 13 acggagggagta 2
>RF01058;MIR806;AACV01016618.1/3926-4166 39947:Oryza sativa Japonica
Group
Length = 241
Score = 182 bits (92), Expect = 2e-45
Identities = 200/240 (83%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 25 actccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccactc 84
||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccactc 62
Query: 85 gtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatct 144
|| |||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 63 gttttattct--ttttttcgaaattattatttattttatttgtgacttactttattatct 120
Query: 145 aaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagact 204
| ||||||||||||| | ||||| ||||||||||||| |||||||||||
Sbjct: 121 ataatactttaagcacacctttttgttttttatatttgtaaaaaaaaattgaataagacg 180
Query: 205 agtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagta 264
|||| ||||||||| || ||||| ||||||| |||||||||||||||| |||||||||
Sbjct: 181 agtggtcaaacgttgcaaacaaaaactcaaaatcccttatattgtgggacggagggagta 240
Score = 97.6 bits (49), Expect = 8e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| || ||||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 241 gtactccctccgtcccacaatataagggattttgagtttttgtttgcaacgtttgaccac 182
Query: 83 tcgtcttattcaa 95
|||||||||||||
Sbjct: 181 tcgtcttattcaa 169
>RF01058;MIR806;AC145127.1/405367-405608 39947:Oryza sativa Japonica
Group
Length = 242
Score = 182 bits (92), Expect = 2e-45
Identities = 201/241 (83%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttataacgtttgac-act 60
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||| ||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 cgttttattcaaatttttttgaaattattatttattttatttgtgacttactttattatc 120
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
|| || |||||||| |||||||| |||||||||| || ||||||||||||
Sbjct: 121 taccgtattttaagcacaacttttcgttttttatatctgtaaaaaatttttgaataagac 180
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| ||||||||| | | |||| ||||||| |||||||||||||||| ||||||||
Sbjct: 181 gagtggtcaaacgttgtaagcgaaaactcaaaatcccttatattgtgggacggagggagt 240
Query: 264 a 264
|
Sbjct: 241 a 241
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| || ||||||||||||||| |||||| |||| ||||||||||||||
Sbjct: 241 tactccctccgtcccacaatataagggattttgagttttcgcttacaacgtttgaccact 182
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 181 cgtcttattcaaa 169
>RF01058;MIR806;AACV01004109.1/11153-11393 39947:Oryza sativa
Japonica Group
Length = 241
Score = 176 bits (89), Expect = 1e-43
Identities = 200/241 (82%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||| | |||||||||||||||||| |||||||| ||| || |||||||||||
Sbjct: 2 tactccctccatcccataatataagggattttgagtttttgtttgcaatgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||| ||| ||||||||| |||||||||||| |||||||||||||||
Sbjct: 62 cgtcttatttaaaattttttaaaattattatttattttatttg--acttactttattatc 119
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
|| | ||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 120 tacattactttaagcacaacttttcgttttttatatttgcaaaaaaaaattgaataagac 179
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| ||||| ||| || | ||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 180 gagtggtcaaatgttgcaagcaaaaactcaaaatcccttatattgtgggacggagggagt 239
Query: 264 a 264
|
Sbjct: 240 a 240
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| || ||||||||||||||| |||||||||||| ||| ||||||||||
Sbjct: 240 tactccctccgtcccacaatataagggattttgagtttttgcttgcaacatttgaccact 181
Query: 84 cgtcttattcaa 95
||||||||||||
Sbjct: 180 cgtcttattcaa 169
>RF01058;MIR806;AAAA02030884.1/12329-12088 39946:Oryza sativa Indica
Group
Length = 242
Score = 174 bits (88), Expect = 4e-43
Identities = 200/241 (82%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| ||||||||||||||||||| |||||| |||| ||||||||||||||
Sbjct: 2 tactccctccgtctcataatataagggattttgagttttcgcttccaacgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
|||||||||| || |||||||||| ||||||||||||||||||| |||||||||
Sbjct: 62 cgtcttattcgaaaaattttgaaattattatttattttatttgtgacttagtttattatc 121
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
|| | ||||||||||| ||||||| ||||||||||||| ||| ||||||||
Sbjct: 122 tacagtactttaagcacaactttttgttttttatatttgtaaaaaaattttaaataagac 181
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| ||||||||| | || |||| | ||||| || ||||||||||||| ||||||||
Sbjct: 182 gagtggtcaaacgttgtaagt-aaaacttaaaatcccctatattgtgggacggagggagt 240
Query: 264 a 264
|
Sbjct: 241 a 241
Score = 65.9 bits (33), Expect = 3e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| || |||||| ||||||||||||||| ||| ||||||||||||||
Sbjct: 241 tactccctccgtcccacaatataggggattttaagtttta-cttacaacgtttgaccact 183
Query: 84 cgtcttatt 92
|||||||||
Sbjct: 182 cgtcttatt 174
>RF01058;MIR806;AP003298.3/13500-13742 39947:Oryza sativa Japonica
Group
Length = 243
Score = 174 bits (88), Expect = 4e-43
Identities = 199/241 (82%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| | |||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 2 tactccctccgtcttataatataagggattttaagtttttgcttgcaatgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| |||||||||| ||||||||||| ||| |||||||||||||
Sbjct: 62 cgtcttattcaaaaatttttgaaattattatttattttatttatgatttactttattatc 121
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
| ||||||||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 122 cgcagtactttaagcacaactttttgctttttatatttgtaaaaaaaatttgaataagac 181
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| |||||||||||| | ||||| | ||||| ||||||||| | ||| ||||||||
Sbjct: 182 gagtgttcaaacgttacaagcaaaaacttaaaatcccttatattataagacggagggagt 241
Query: 264 a 264
|
Sbjct: 242 a 242
Score = 123 bits (62), Expect = 1e-27
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 243 gtactccctccgtcttataatataagggattttaagtttttgcttgtaacgtttgaacac 184
Query: 83 tcgtcttattcaaa 96
||||||||||||||
Sbjct: 183 tcgtcttattcaaa 170
>RF01058;MIR806;AP008214.1/3500621-3500380 39947:Oryza sativa
Japonica Group
Length = 242
Score = 174 bits (88), Expect = 4e-43
Identities = 200/241 (82%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||| | ||||||| |||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgcacggtttgactact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| | |||||||| ||| ||| |||||||||||||||||||||
Sbjct: 62 cgtcttattcaaaaaattttggaattattatttacttt-tttgtgacttactttattatc 120
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
||||||||||| ||| ||||||| |||||||||||||| ||||||||||||
Sbjct: 121 caaaatactttacgcacaactttttgttttttatatttgcataaattttttgaataagac 180
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| |||||| |||| | ||||| ||||||| ||||||||| |||||| ||||||||
Sbjct: 181 gagtggtcaaacactacaagcaaaaactcaaaatcccttatattatgggacggagggagt 240
Query: 264 a 264
|
Sbjct: 241 a 241
Score = 105 bits (53), Expect = 3e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 241 tactccctccgtcccataatataagggattttgagtttttgcttgtagtgtttgaccact 182
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 181 cgtcttattcaaa 169
Score = 50.1 bits (25), Expect = 2e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| ||| |||||| | || | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtagtcaaaccgtgcaagcaaaaactcaaaatcccttatattatgg 15
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa Indica
Group
Length = 244
Score = 170 bits (86), Expect = 7e-42
Identities = 201/243 (82%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| | |||||||||| | ||| ||||| |
Sbjct: 2 tactccctccgtcccataatataagggattttgattttttgcttgcactgttcgaccatt 61
Query: 84 cgtcttattcaaannnnnnnga-aattattaattattttatttgtgacttactttattat 142
||||||||||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct: 62 cgtcttattcaaaaaaaatttagaattattatttattttatttgtgacttactttattat 121
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
|||| ||||||||||| ||||||| ||||||||||||||| |||||||||||
Sbjct: 122 ttaaagtactttaagcacaactttttattttttatatttgcacaatttttttgaataaga 181
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| |||| ||||| | |||| ||||||||||||| |||||||| |||||| |||||||
Sbjct: 182 cgagtggtcaaatggtacaaacaaaaaatcaaaatctcttatattatgggacggagggag 241
Query: 263 tag 265
|||
Sbjct: 242 tag 244
Score = 81.8 bits (41), Expect = 5e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| ||||||||||| |||||| | |||||| ||||| | ||||||||||
Sbjct: 243 tactccctccgtcccataatataagagattttgattttttgtttgtaccatttgaccact 184
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 183 cgtcttattcaaa 171
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 225 aaaaaatcaaaataccttatattgtgggacagagggagtag 265
||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 41 aaaaaatcaaaatcccttatattatgggacggagggagtag 1
>RF01058;MIR806;AAAA02000569.1/44638-44880 39946:Oryza sativa Indica
Group
Length = 243
Score = 167 bits (84), Expect = 1e-40
Identities = 198/241 (82%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| || |||||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 2 tactccctccgtcccacaatataagagattttgagtttttgcttgcaacgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
|| |||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 62 cggcttattcaaaaatttttgaaattattatttattttatttgtgacttactttattatt 121
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
| | ||||||||| | |||||||| |||||||||||||| ||| |||||||
Sbjct: 122 cacagtactttaagtacaacttttcgttttttatatttgcaaaaaaaaattgtataagac 181
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| |||||| || | | ||||| ||||||| |||| ||||||||||| ||||||||
Sbjct: 182 gagtggtcaaacattgtacgcaaaaactcaaaatcccttgtattgtgggacggagggagt 241
Query: 264 a 264
|
Sbjct: 242 a 242
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||| | |||| ||||||||| || | ||||| ||||||| ||||||||||||
Sbjct: 74 tttgaataagccgagtggtcaaacgttgcaagcaaaaactcaaaatctcttatattgtgg 15
Query: 252 gacagagggagtag 265
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| || |||| |||||||||| ||||||||| | || ||||||||||
Sbjct: 243 gtactccctccgtcccacaatacaagggattttgagtttttgcgtacaatgtttgaccac 184
Query: 83 tcgtcttat 91
|||||||||
Sbjct: 183 tcgtcttat 175
>RF01058;MIR806;AP004797.3/60701-60942 39947:Oryza sativa Japonica
Group
Length = 242
Score = 167 bits (84), Expect = 1e-40
Identities = 199/241 (82%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| ||||||||||| | ||||| ||||
Sbjct: 2 tactccctccgtcccataatataagggattttgtgtttttgcttgcactctttgatcact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| |||||||||| ||||||| |||||||||| |||||||||
Sbjct: 62 cgtcttattcaaaaaattttgaaattattatttatttt-tttgtgacttgttttattatc 120
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
||| ||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 121 caaagtactttaagcacaacttttcattttttatatttgcataatttttttgaataagat 180
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||||||||| |||| | ||||| ||||||| ||||||||| |||||| ||||||||
Sbjct: 181 gagtgatcaaatagtacaagcaaaaactcaaaatcccttatattatgggacggagggagt 240
Query: 264 a 264
|
Sbjct: 241 a 241
Score = 81.8 bits (41), Expect = 5e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||
Sbjct: 241 tactccctccgtcccataatataagggattttgagtttttgcttgtactatttgatcact 182
Query: 84 cgtcttattcaaa 96
| |||||||||||
Sbjct: 181 catcttattcaaa 169
Score = 50.1 bits (25), Expect = 2e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||||||||| | || | ||||| |||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtgatcaaagagtgcaagcaaaaacacaaaatcccttatattatgg 15
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AAAA02007190.1/17283-17525 39946:Oryza sativa Indica
Group
Length = 243
Score = 167 bits (84), Expect = 1e-40
Identities = 198/241 (82%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| | |||||||||||||||| | ||||||||| | ||||||||| |
Sbjct: 2 tactccctccgtcccttaatataagggattttgacattttgcttgcactgtttgaccatt 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 62 cgtcttattcaaatatatttgaaattattatttattttatttgtgacttactttattatt 121
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
||| ||||||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 122 caaagtactttaagcacaacttttctttttttatatttgcacaaattttttgaataagac 181
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| |||||| |||| | |||| ||||||| ||||||||| ||||| ||||||||
Sbjct: 182 gagtggtcaaacagtacaagcaaaatgtcaaaatcccttatattaggggaccgagggagt 241
Query: 264 a 264
|
Sbjct: 242 a 242
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
|||||||||| || | |||||||||||||||| | ||||||||||| ||||||||||
Sbjct: 243 gtactccctcggtcccctaatataagggattttgacattttgcttgtactgtttgaccac 184
Query: 83 tcgtcttattcaaa 96
||||||||||||||
Sbjct: 183 tcgtcttattcaaa 170
>RF01058;MIR806;AP008213.1/28335111-28335353 39947:Oryza sativa
Japonica Group
Length = 243
Score = 163 bits (82), Expect = 2e-39
Identities = 190/231 (82%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| | ||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 1 gtactccctccgtctaataatataagggattttgagtttttgcttatactgtttgaccac 60
Query: 83 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||||||| |||||||| ||||| | ||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaaatttagaattattatttattgtttttgtgacttactttattat 120
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
| ||| ||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 121 ccaaagtactttaagcacaacttttcgttttttatatttgcacaaattttttgaataaga 180
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtggga 253
| |||| |||||| | || ||||| ||||||| ||||||||| |||||
Sbjct: 181 cgagtggtcaaacagtgcaaacaaaaactcaaaattccttatattatggga 231
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 38 cataatataagggattttaagtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||||||||| ||||| |||||||| ||| | ||||||||||||||||||||||||
Sbjct: 228 cataatataaggaattttgagtttttgtttgcactgtttgaccactcgtcttattcaaa 170
>RF01058;MIR806;AP003960.2/91001-90759 39947:Oryza sativa Japonica
Group
Length = 243
Score = 163 bits (82), Expect = 2e-39
Identities = 196/239 (82%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||||| ||||||||| | ||||||||| |
Sbjct: 2 tactccctccgttccataatataagggattttaactttttgcttacactgtttgaccatt 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 62 cgtcttattcaaaaaaaattgaaattattatttattttatttgtgacttactttattatc 121
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
||| ||||||||||| ||| ||| |||||||||||| | ||||||||||||
Sbjct: 122 caaagtactttaagcacaaccttttgttttttatatttacacaatttttttgaataagac 181
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
|||| |||||| | || ||||||| | ||||| ||||||||| ||| || |||||||
Sbjct: 182 cagtggtcaaacagtgcaagtaaaaagttaaaatcccttatattatggaacggagggag 240
Score = 77.8 bits (39), Expect = 8e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 26 ctccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccactcg 85
|||||||||| |||||||||||||||||||| ||||| |||| | ||||||||||| |
Sbjct: 240 ctccctccgttccataatataagggattttaactttttacttgcactgtttgaccactgg 181
Query: 86 tcttattcaaa 96
|||||||||||
Sbjct: 180 tcttattcaaa 170
>RF01062;MIR812;AP005913.3/63117-62944 39947:Oryza sativa Japonica
Group
Length = 174
Score = 161 bits (81), Expect = 7e-39
Identities = 113/126 (89%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 174 gtttttgctcgtaacgtttaaccactcgtcttattcaaatttttttgaaattattaatta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||
Sbjct: 114 ttttatttgtgacttactttattatctacagtactttaagcacaacttttcgttttttat 55
Query: 178 atttgc 183
||||||
Sbjct: 54 atttgc 49
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||| |||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttacttgcaacgtttgaccactcgtcttattcaaa 39
>RF01058;MIR806;AAAA02015956.1/1-242 39946:Oryza sativa Indica Group
Length = 242
Score = 161 bits (81), Expect = 7e-39
Identities = 199/242 (82%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||| ||| |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgctagtagtgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||| |||||||||| ||| ||| |||||||||| ||||||||||
Sbjct: 62 tatcttattcaaaaaattttgaaattattatttacttt-tttgtgacttgctttattatc 120
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
|| ||||||| ||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 121 ccaagtactttacgcacaacttttcattttttatatttgcataaattttttgaataagac 180
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| |||||| || | ||||||| ||||||| | ||||||| |||||| ||||||||
Sbjct: 181 gagtggtcaaacactataagtaaaaactcaaaatcctttatattatgggacggagggagt 240
Query: 264 ag 265
||
Sbjct: 241 ag 242
Score = 81.8 bits (41), Expect = 5e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||| ||||||| ||||||| ||| || |||||||||||
Sbjct: 241 tactccctccgtcccataatataaaggattttgagtttttacttatagtgtttgaccact 182
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 181 cgtcttattcaaa 169
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
||||||||||| |||| |||||| ||| | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagataagtggtcaaacactactagcaaaaactcaaaatcccttatattatgg 15
Query: 252 gacagagggagtag 265
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01062;MIR812;AAAA02006808.1/23504-23678 39946:Oryza sativa Indica
Group
Length = 175
Score = 159 bits (80), Expect = 3e-38
Identities = 106/117 (90%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 174 tttttgcttgtaacgtttgaccactcgtcttattcaaaattttttgaaattattatttat 115
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttt 175
||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||
Sbjct: 114 tttatttgtgacttactttattatctacaatactttaagtacaacttttcatttttt 58
>RF01062;MIR812;AAAA02021140.1/3763-3594 39946:Oryza sativa Indica
Group
Length = 170
Score = 157 bits (79), Expect = 1e-37
Identities = 111/124 (89%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 170 gtttttgcttgcaacgtttgaccactcatcttattcaaaaaattctgaaattattaatta 111
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||
Sbjct: 110 ttttatttgtgacttactttattatctacagtactttaagcacaacttttcgttttttat 51
Query: 178 attt 181
||||
Sbjct: 50 attt 47
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||||||||||| | ||||||||| |||||||
Sbjct: 1 gtttttgcttgtaacatctgaccactcatcttatt 35
>RF01058;MIR806;AAAA02017486.1/15213-14973 39946:Oryza sativa Indica
Group
Length = 241
Score = 157 bits (79), Expect = 1e-37
Identities = 138/160 (86%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| ||| ||||||| |||||| ||||||| |||| | |||||||||||
Sbjct: 2 tactccctccgtcccatgatataagagattttgagttttttcttgcactgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| |||||||||| ||||||| || ||||||||||||||||||
Sbjct: 62 cgtcttattcaaaacattttgaaattattatttatttttttcgtgacttactttattatc 121
Query: 144 taaaatactttaagcataacttttcattttttatatttgc 183
||||||||||||||| |||||||| ||||||||||||||
Sbjct: 122 caaaatactttaagcacaacttttcgttttttatatttgc 161
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||| | ||||||||||| |||||| |||||||||||| | |||||||||||
Sbjct: 240 tactccctccatcccataatataagagattttgagtttttgcttgcactgtttgaccact 181
Query: 84 cgtct 88
|||||
Sbjct: 180 cgtct 176
>RF01058;MIR806;AACV01022700.1/19974-19734 39947:Oryza sativa
Japonica Group
Length = 241
Score = 155 bits (78), Expect = 4e-37
Identities = 198/242 (81%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||| ||||| |||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 1 gtactccttccgtcccataatataagggattttgaatttttgcttgcgttgtttgaccac 60
Query: 83 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||| ||| |||||||||| ||||||| |||| ||||||||||||||
Sbjct: 61 tcgtcttatttaaaaaaatttgaaattattatttattttttttg--acttactttattat 118
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
| ||| |||||||||||||||||||| |||||||||||||| ||| |||||||
Sbjct: 119 ccaaagtactttaagcataacttttcgttttttatatttgcacaaattttttaaataaga 178
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| ||||||||||| | || | ||||| ||||||| ||||||||| ||||| |||||||
Sbjct: 179 cgagtgatcaaaccgtgcaagcaaaaactcaaaatcccttatattatgggatggagggag 238
Query: 263 ta 264
||
Sbjct: 239 ta 240
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||| | |||||||||||||||||| |||||||||||| | |||||| |||
Sbjct: 241 gtactccctccatcccataatataagggattttgagtttttgcttgcacggtttgatcac 182
Query: 83 tcgtcttatt 92
||||||||||
Sbjct: 181 tcgtcttatt 172
>RF01062;MIR812;AAAA02030701.1/27133-27304 39946:Oryza sativa Indica
Group
Length = 172
Score = 153 bits (77), Expect = 2e-36
Identities = 111/123 (90%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 172 gtttttgcttggaacgtttgaccactcgtcttattcaaaagtttt-gaaattattcatta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||
Sbjct: 113 ttttatttgtgacttactttattatctatagtactttaagcacaacttttcattttttat 54
Query: 178 att 180
|||
Sbjct: 53 att 51
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 63 tgcttgtaacgtttgaccactcgtcttattcaa 95
|||||| ||||||||||||||| ||||||||||
Sbjct: 6 tgcttgcaacgtttgaccactcatcttattcaa 38
>RF01062;MIR812;AC104429.2/4630-4801 39947:Oryza sativa Japonica
Group
Length = 172
Score = 153 bits (77), Expect = 2e-36
Identities = 112/126 (88%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| |||||||||||| ||||||||||||||||||| |||||||||| |||
Sbjct: 172 gtttttacttgtaacgtttaaccactcgtcttattcaaaattttttgaaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | ||||||||||| || ||||||||||||||
Sbjct: 112 ttttatttgtgacttactttattatctacagtactttaagcacaagttttcattttttat 53
Query: 178 atttgc 183
||||||
Sbjct: 52 atttgc 47
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
||||||| ||| ||||||| ||||||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttaaccactcgtcttattcaa 38
>RF01062;MIR812;AAAA02030638.1/19667-19840 39946:Oryza sativa Indica
Group
Length = 174
Score = 153 bits (77), Expect = 2e-36
Identities = 112/126 (88%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| ||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 174 gtttttgcttgcaacgtttgatcactcgtcttattcaattttttttgaaattattaatta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||
Sbjct: 114 ttttatttgtgacttacttttttatctacagtactttaagcacaacttttcattttttat 55
Query: 178 atttgc 183
||||||
Sbjct: 54 atttgc 49
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
|||| |||||| ||||| ||||||||||||||||||||
Sbjct: 1 gtttctgcttgcaacgtatgaccactcgtcttattcaa 38
>RF01062;MIR812;AP008208.1/3789206-3789378 39947:Oryza sativa
Japonica Group
Length = 173
Score = 153 bits (77), Expect = 2e-36
Identities = 112/126 (88%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| |||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 173 gtttttgcttgcaacgtttgaccattcgtcttattcaaaaaattttgaaattattaatta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||||||
Sbjct: 113 ttttatttgtgacttactttattatctacagtactttaagcacaactttttgttttttat 54
Query: 178 atttgc 183
||||||
Sbjct: 53 atttgc 48
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaa 38
>RF01062;MIR812;AACV01005799.1/13497-13667 39947:Oryza sativa
Japonica Group
Length = 171
Score = 151 bits (76), Expect = 6e-36
Identities = 111/125 (88%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| |||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 171 gtttttacttgtaacgtttgaccactcgtcttattcaaattattttaaaattattattta 112
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
| |||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||
Sbjct: 111 tcttatttgtgacttactttattatctacaatactttaagcacaacttttcgttttttat 52
Query: 178 atttg 182
|||||
Sbjct: 51 atttg 47
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaa 229
|||||||||||| |||| |||||||||||| |||||||
Sbjct: 133 tttgaataagacgagtggtcaaacgttacaagtaaaaa 170
>RF01062;MIR812;AP002538.2/42335-42164 39947:Oryza sativa Japonica
Group
Length = 172
Score = 149 bits (75), Expect = 3e-35
Identities = 110/124 (88%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 172 gtttttgcttgcaacgtttgaccactcgtcttattcaattttttttgaaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||||
Sbjct: 112 ttttatttgtgacttattttattatctacaatactttaagcacaacttttcgttttttat 53
Query: 178 attt 181
||||
Sbjct: 52 attt 49
>RF01062;MIR812;AAAA02010926.1/12447-12618 39946:Oryza sativa Indica
Group
Length = 172
Score = 147 bits (74), Expect = 1e-34
Identities = 138/163 (84%), Gaps = 1/163 (0%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
|||||| ||||||||||||| ||||||||||||| || |||||||||| |||
Sbjct: 171 tttttgtttgtaacgtttgatcactcgtcttatttaatttgttttgaaattattatttag 112
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 111 tttatttgtgacttactttattatctacaatactttaagcataacttttc-gtttttata 53
Query: 179 tttgcnnnnnnnntttgaataagactagtgatcaaacgttaca 221
||||| |||||||||||| |||||||||||||||||
Sbjct: 52 tttgcaaaaataatttgaataagacgagtgatcaaacgttaca 10
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||| ||||||||||||| |||||||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttgatcactcgtcttattcaaa 39
>RF01058;MIR806;AP008214.1/20963120-20962878 39947:Oryza sativa
Japonica Group
Length = 243
Score = 147 bits (74), Expect = 1e-34
Identities = 185/227 (81%)
Strand = Plus / Plus
Query: 38 cataatataagggattttaagtttttgcttgtaacgtttgaccactcgtcttattcaaan 97
|||||||||||||||||| | ||||| ||| | ||||||||| ||||||||||||||
Sbjct: 16 cataatataagggattttgactttttatttgcactgtttgaccattcgtcttattcaaaa 75
Query: 98 nnnnnngaaattattaattattttatttgtgacttactttattatctaaaatactttaag 157
|||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 76 aaaattagaattattatttattttatttgtgacttactttattatctatcgtactttaag 135
Query: 158 cataacttttcattttttatatttgcnnnnnnnntttgaataagactagtgatcaaacgt 217
|| ||||||||||||||||||||||| |||||||||||| |||| ||||||
Sbjct: 136 cacaacttttcattttttatatttgcacaaattttttgaataagacgagtggtcaaacag 195
Query: 218 tacatgtaaaaaatcaaaataccttatattgtgggacagagggagta 264
| || | ||||| ||||||| ||||||||| |||||| || ||||||
Sbjct: 196 tgcaagcaaaaagtcaaaatcccttatattatgggacggatggagta 242
Score = 81.8 bits (41), Expect = 5e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||| ||||| |||||||||||||||||| | |||||||||| | |||||||||||
Sbjct: 242 tactccatccgtcccataatataagggattttgactttttgcttgcactgtttgaccact 183
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 182 cgtcttattcaaa 170
>RF01062;MIR812;AACV01023580.1/13642-13468 39947:Oryza sativa
Japonica Group
Length = 175
Score = 145 bits (73), Expect = 4e-34
Identities = 111/126 (88%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| ||||||| |||||||||||||| ||||||||| ||||||||||||||
Sbjct: 175 gtttttacttgtaatgtttgaccactcgttttattcaaaaatttttgaaattattaatta 116
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||||||||||||||||||||| || | ||||||||||| |||||||| ||||||||
Sbjct: 115 ttttatttgtgacttactttattatttatagtactttaagcacaacttttcgttttttat 56
Query: 178 atttgc 183
||||||
Sbjct: 55 atttgc 50
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| ||||||||| |||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgatcactcgtcttattcaaa 39
>RF01062;MIR812;AP004302.3/102499-102666 39947:Oryza sativa Japonica
Group
Length = 168
Score = 145 bits (73), Expect = 4e-34
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| ||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 168 gtttttgtttgtaacgtttgaccactcgtcttattcaaatttttttgaaattattattta 109
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataactttt 167
|||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 108 ttttatttgtgacttactttattatctacagtactttaagcataactttt 59
>RF01062;MIR812;AAAA02006096.1/10115-10287 39946:Oryza sativa Indica
Group
Length = 173
Score = 143 bits (72), Expect = 2e-33
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| ||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 173 gtttttgtttgtaacgtttgaccactcgtcttattcaaattcttttgaaattattattta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||| ||||| | ||||||||||| || ||||| ||||||||
Sbjct: 113 ttttatttgtgacttactttatcatctacagtactttaagcacaatttttcgttttttat 54
Query: 178 atttg 182
|||||
Sbjct: 53 atttg 49
>RF01062;MIR812;AAAA02022622.1/23036-23207 39946:Oryza sativa Indica
Group
Length = 172
Score = 143 bits (72), Expect = 2e-33
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
|||||||||||||||||| |||||| |||||||| ||| |||||||||||||||
Sbjct: 171 tttttgcttgtaacgtttaaccacttgtcttatttaaatttttttgaaattattaattat 112
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||||||||||||||||||| | ||||||||||| || ||||| |||||||||
Sbjct: 111 tttatttgtgacttactttattatctacagtactttaagcacaaattttcgttttttata 52
Query: 179 tttgc 183
|||||
Sbjct: 51 tttgc 47
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcatcttattcaaa 39
>RF01062;MIR812;AAAA02017093.1/21668-21840 39946:Oryza sativa Indica
Group
Length = 173
Score = 143 bits (72), Expect = 2e-33
Identities = 107/121 (88%)
Strand = Plus / Minus
Query: 62 ttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatttt 121
|||||| |||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 169 ttgcttataacgtttgatcactcgtcttattcaattttttttaaaattattaattatttt 110
Query: 122 atttgtgacttactttattatctaaaatactttaagcataacttttcattttttatattt 181
|||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 109 atttatgacttactttattatctataatactttaagcataacttttcgttttttatattt 50
Query: 182 g 182
|
Sbjct: 49 g 49
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||||||| ||||||||||||||| |||||||||||
Sbjct: 1 gtttttgcttacaacgtttgaccactcatcttattcaaa 39
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 193 ttgaataagactagtgatcaaacgtta 219
||||||||||| |||||||||||||||
Sbjct: 136 ttgaataagacgagtgatcaaacgtta 162
>RF01062;MIR812;AACV01007669.1/15637-15464 39947:Oryza sativa
Japonica Group
Length = 174
Score = 143 bits (72), Expect = 2e-33
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| || |||||||||||||||||||||||| |||||||||| |||
Sbjct: 174 gtttttgcttgcaatgtttgaccactcgtcttattcaaaaaaatttgaaattattattta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||
Sbjct: 114 ttttatttgtgacttactttattatctacagtattttaagcataactttttgttttttat 55
Query: 178 atttg 182
|||||
Sbjct: 54 atttg 50
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| ||| ||| |||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacatttaaccactcgtcttattcaaa 39
>RF01062;MIR812;AP008210.1/2457757-2457587 39947:Oryza sativa
Japonica Group
Length = 171
Score = 143 bits (72), Expect = 2e-33
Identities = 144/172 (83%), Gaps = 2/172 (1%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| ||||||||| |||||||||||||||| |||||||||||||
Sbjct: 171 gtttttgcttgcaacgtttgatcactcgtcttattcaattttttaaaaaattattaatta 112
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||| ||||||||||||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 111 ttttattcatgacttactttattatctataataatttaagcataatttttcattttttat 52
Query: 178 atttgcnnnnnnnntttgaataagactagtgatcaaacgttacatgtaaaaa 229
|||| ||||||||||||||||| |||||||||||| |||||||
Sbjct: 51 attt--aaagaaaatttgaataagactagtggtcaaacgttacaagtaaaaa 2
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||| ||||||||||||||||||| ||||||||||||
Sbjct: 1 gtttttacttgtaacgtttgaccactagtcttattcaaa 39
>RF01058;MIR806;AC133008.3/78480-78237 39947:Oryza sativa Japonica
Group
Length = 244
Score = 143 bits (72), Expect = 2e-33
Identities = 139/161 (86%), Gaps = 2/161 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgtattgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnnga-aattattaattattttatttgtgacttactttattat 142
||||||||||||| | |||||||| ||||||| ||||||| ||||||||||||
Sbjct: 62 cgtcttattcaaaaaaattttagaattattatttatttt-tttgtgatttactttattat 120
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgc 183
| ||| || |||||||| |||||||| ||||||||||||||
Sbjct: 121 ccaaagtattttaagcacaacttttcgttttttatatttgc 161
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| |||||||||||||||||| |||||||| || | ||||||||||
Sbjct: 244 gtactccctccgtcccataatataagggattttgagtttttgtttagattgtttgaccac 185
Query: 83 tcgtcttattcaaa 96
||||||||||||||
Sbjct: 184 tcgtcttattcaaa 171
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| |||||| |||| | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacaatacaagcaaaaactcaaaatcccttatattatgg 15
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01062;MIR812;AACV01013318.1/11508-11337 39947:Oryza sativa
Japonica Group
Length = 172
Score = 141 bits (71), Expect = 6e-33
Identities = 109/124 (87%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
|||||||||| ||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 171 tttttgcttgcaacgtttgaccactcgtcttattcaaattttttttaaattattatttat 112
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||||||||||||||||||| | || |||||||| |||||||| |||||||||
Sbjct: 111 tttatttgtgacttactttattatctatagtagtttaagcacaacttttcgttttttata 52
Query: 179 tttg 182
||||
Sbjct: 51 tttg 48
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
|||||| |||| |||||||||||| |||||||||||||
Sbjct: 1 gtttttacttgcaacgtttgaccattcgtcttattcaa 38
>RF01062;MIR812;AP008213.1/28888545-28888717 39947:Oryza sativa
Japonica Group
Length = 173
Score = 141 bits (71), Expect = 6e-33
Identities = 137/164 (83%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| ||| |||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 173 gttttttcttataacgtttgaccactcgtcttattcaaaaaattttgaaattattattta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||
Sbjct: 113 ttttatttgtgacttactttattatctatgttactttaagcccaacttttcgttttttat 54
Query: 178 atttgcnnnnnnnntttgaataagactagtgatcaaacgttaca 221
|||||| |||||||||||| | || ||||||||||||
Sbjct: 53 atttgcaaaataaatttgaataagacgaatggtcaaacgttaca 10
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccattcgtcttattcaaa 39
>RF01058;MIR806;AP004560.3/95898-95658 39947:Oryza sativa Japonica
Group
Length = 241
Score = 141 bits (71), Expect = 6e-33
Identities = 199/243 (81%), Gaps = 4/243 (1%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| |||| |||||||||||||| |||||||| ||| | ||||||||||
Sbjct: 1 gtactccctccgtctcatgatataagggattttgagtttttgtttgcactgtttgaccac 60
Query: 83 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||||||| | |||||||| |||| | ||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaattttggaattatta--tattat-tttgtgacttactttattat 117
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgc-nnnnnnnntttgaataag 201
| ||| ||||||||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 118 ccaaagtactttaagcacaatttttcgttttttatatttgcacaaatttttttgaataag 177
Query: 202 actagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggga 261
|| |||| |||||| || | ||||||| | ||||| ||||||||| |||||| ||||||
Sbjct: 178 acgagtggtcaaacagtataagtaaaaacttaaaatcccttatattatgggacggaggga 237
Query: 262 gta 264
|||
Sbjct: 238 gta 240
Score = 97.6 bits (49), Expect = 8e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||||||||||| ||| || |||||||||||
Sbjct: 240 tactccctccgtcccataatataagggattttaagtttttacttatactgtttgaccact 181
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 180 cgtcttattcaaa 168
>RF01062;MIR812;AAAA02004745.1/59056-59226 39946:Oryza sativa Indica
Group
Length = 171
Score = 139 bits (70), Expect = 2e-32
Identities = 100/111 (90%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
||||||||| |||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 156 gtttgaccattcgtcttattcaaatttttttgaaattattatttattttatttgtgactt 97
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgc 183
|||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 96 actttattatctaaaatactttaagcataa-ttttcgttttttatatttgc 47
>RF01062;MIR812;AAAA02008634.1/17996-17821 39946:Oryza sativa Indica
Group
Length = 176
Score = 139 bits (70), Expect = 2e-32
Identities = 114/131 (87%), Gaps = 5/131 (3%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 176 gtttttgcttgtaacgtttgaccactcgtcttattcaaaattttttgaaattattattta 117
Query: 118 ttttatttgtgac-----ttactttattatctaaaatactttaagcataacttttcattt 172
||||||||||||| ||||||||||||||| |||||||||||||||||||| |||
Sbjct: 116 ttttatttgtgacttactttactttattatctacgatactttaagcataactttttgttt 57
Query: 173 tttatatttgc 183
|||||||||||
Sbjct: 56 tttatatttgc 46
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattca 94
||||||| ||||||||||| |||| ||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttaaccagtcgtcttattca 37
>RF01062;MIR812;AACV01025331.1/33364-33536 39947:Oryza sativa
Japonica Group
Length = 173
Score = 139 bits (70), Expect = 2e-32
Identities = 108/123 (87%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
||||| |||| ||||||||| ||||||||||||||||| |||||||||| ||||
Sbjct: 172 ttttttcttgcaacgtttgatcactcgtcttattcaaaattttttgaaattattatttat 113
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||||||||
Sbjct: 112 tttatttgtgacttactttattatctatagtactttaagcacaactttttattttttata 53
Query: 179 ttt 181
|||
Sbjct: 52 ttt 50
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 acgtttgaccactcgtcttattc 93
|||||||||||||||||||||||
Sbjct: 14 acgtttgaccactcgtcttattc 36
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 192 tttgaataagactagtgatcaaacgtt 218
|||||||||||| ||||||||||||||
Sbjct: 135 tttgaataagacgagtgatcaaacgtt 161
>RF01058;MIR806;AAAA02007696.1/5047-4813 39946:Oryza sativa Indica
Group
Length = 235
Score = 139 bits (70), Expect = 2e-32
Identities = 124/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| | |||||||||| | |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgactttttgcttgcactgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 62 cgtcttattcaaaaaattttgaaattattatttattttatttgtgaattactttattatc 121
Query: 144 taaaatactttaagcataacttt 166
||| ||||||||||| ||||||
Sbjct: 122 -aaagtactttaagcacaacttt 143
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| | | |||||||| | |||||||||||
Sbjct: 234 tactccctccgtcccataatataagggattttgactatttgcttgcactgtttgaccact 175
Query: 84 cgtcttattcaaa 96
||||||||||||
Sbjct: 174 tgtcttattcaaa 162
Score = 58.0 bits (29), Expect = 7e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| |||||| | || | ||||| ||||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacagtgcaagcaaaaagtcaaaatcccttatattatgg 15
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01062;MIR812;AAAA02003196.1/32277-32449 39946:Oryza sativa Indica
Group
Length = 173
Score = 137 bits (69), Expect = 1e-31
Identities = 112/126 (88%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| | ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 173 gtttttgcttgcagcgtttgaccactcgtcttattcaaatttttttgaaattattaatta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||||||||||||||||| |||||| | ||||||||||| ||||||||| |||||||
Sbjct: 113 ttttatttgtgacttacttta-tatctacagtactttaagcacaacttttca-tttttat 56
Query: 178 atttgc 183
||||||
Sbjct: 55 atttgc 50
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| ||||||||| |||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgagcactcgtcttattcaaa 39
>RF01062;MIR812;AC093088.4/58736-58908 39947:Oryza sativa Japonica
Group
Length = 173
Score = 137 bits (69), Expect = 1e-31
Identities = 141/170 (82%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
|||| |||| ||||||| ||||||||| ||||||||| |||||||||| |||||
Sbjct: 171 tttttcttgcaacgtttaaccactcgttttattcaaatatttttgaaattattatttatt 112
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
|||||||||||||| ||||||||| | | |||||||||||||||||||||||||||||||
Sbjct: 111 ttatttgtgacttaatttattatccacagtactttaagcataacttttcattttttatat 52
Query: 180 ttgcnnnnnnnntttgaataagactagtgatcaaacgttacatgtaaaaa 229
||| ||||||||||| |||| |||||||||||| |||||||
Sbjct: 51 ttgtaaaaaaaaattgaataagacaagtggtcaaacgttacaagtaaaaa 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
|||||| ||||||||||||||||||| |||||||||||
Sbjct: 1 gtttttacttgtaacgtttgaccacttgtcttattcaa 38
>RF01062;MIR812;AP003849.2/59096-58923 39947:Oryza sativa Japonica
Group
Length = 174
Score = 137 bits (69), Expect = 1e-31
Identities = 110/126 (87%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| |||||||||||||| ||||||||||| |||||||||| |||
Sbjct: 174 gtttttgcttgcaacgtttgaccacttgtcttattcaacaaattttgaaattattattta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 114 ttttatttgtgacttaatttattatctacagtactttaagcataacttttcgctttttat 55
Query: 178 atttgc 183
||||||
Sbjct: 54 atttgc 49
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||| ||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtcttattcaaa 39
>RF01058;MIR806;AAAA02031014.1/26426-26184 39946:Oryza sativa Indica
Group
Length = 243
Score = 137 bits (69), Expect = 1e-31
Identities = 134/158 (84%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| | ||||||||| | ||||||||| |
Sbjct: 2 tactccctccgtcccataatataagggattttgactttttgcttacactgtttgaccatt 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| |||||||| ||||||||||||||| |||||||||||||
Sbjct: 62 cgtcttattcaaaaaaaattagaattattatttattttatttgtgatttactttattatc 121
Query: 144 taaaatactttaagcataacttttcattttttatattt 181
||| ||||||||||| ||||||| |||||||||||||
Sbjct: 122 caaagtactttaagcacaactttttattttttatattt 159
Score = 65.9 bits (33), Expect = 3e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||||| ||||| ||| | ||||||||| |
Sbjct: 242 tactccctccgtcccataatataagggattttaactttttacttacactgtttgaccagt 183
Query: 84 cgtcttatt 92
|||||||||
Sbjct: 182 cgtcttatt 174
>RF01062;MIR812;AAAA02016557.1/24055-24229 39946:Oryza sativa Indica
Group
Length = 175
Score = 135 bits (68), Expect = 4e-31
Identities = 110/125 (88%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
||||||||| ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 173 ttttgcttgcaacgtttgaccactcgtcttattcaaaattttttgaaattattatttatt 114
Query: 120 ttatttgt-gacttactttattatctaaaatactttaagcataacttttcattttttata 178
|||||||| |||||||||||||||||| | |||||||| || |||||||| |||||||||
Sbjct: 113 ttatttgtcgacttactttattatctacagtactttaaacacaacttttcgttttttata 54
Query: 179 tttgc 183
|||||
Sbjct: 53 tttgc 49
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||| ||| || ||||||||||||||||||||||||
Sbjct: 1 gtttttgattgcaatgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02000041.1/40875-40703 39946:Oryza sativa Indica
Group
Length = 173
Score = 135 bits (68), Expect = 4e-31
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 173 gtttttgcttgctacgtttgaccactcgtcttattcaaaattttttaaaattattaatta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 113 ttttatttgtgacttgctttattatctacggtactttaagcacaacttttcgttttttat 54
Query: 178 atttg 182
|||||
Sbjct: 53 atttg 49
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||| || |||| ||||||||||||||||||||||||
Sbjct: 1 gtttttactggtaatgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02007251.1/7007-6836 39946:Oryza sativa Indica
Group
Length = 172
Score = 135 bits (68), Expect = 4e-31
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||||||| |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 172 gtttttgcttacaacgtttgaccactcgtcttattcaatattttttgaaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||
Sbjct: 112 ttttatttgtgacttactttattatctacagcactttaagcataacttttcgctttttat 53
Query: 178 atttg 182
|||||
Sbjct: 52 atttg 48
>RF01062;MIR812;AAAA02018583.1/14874-15047 39946:Oryza sativa Indica
Group
Length = 174
Score = 135 bits (68), Expect = 4e-31
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| |||| ||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 174 gtttttacttgaaacgtttgaccactcgtcttattcaaaaaattttaaaattattattta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| |||||||||| || ||||||| ||||||||
Sbjct: 114 ttttatttgtgacttactttattatctacaatactttaatcacaactttttgttttttat 55
Query: 178 atttg 182
|||||
Sbjct: 54 atttg 50
>RF01062;MIR812;AACV01022584.1/5740-5911 39947:Oryza sativa Japonica
Group
Length = 172
Score = 135 bits (68), Expect = 4e-31
Identities = 97/109 (88%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 158 gtttgaccacttgtcttattcaaatttttttaaaattattaattattttatttgtgactt 99
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatattt 181
||||||||||||| |||| ||||||||||||||||| ||||||||||||
Sbjct: 98 actttattatctacaataatttaagcataacttttcgttttttatattt 50
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||| ||| |||||||||||||||||||||||
Sbjct: 1 gtttttgtttgcaacgtttgaccactcgtcttatt 35
>RF01058;MIR806;AAAA02003762.1/8891-8652 39946:Oryza sativa Indica
Group
Length = 240
Score = 135 bits (68), Expect = 4e-31
Identities = 126/145 (86%), Gaps = 2/145 (1%)
Strand = Plus / Plus
Query: 39 ataatataagggattttaagtttttgcttgtaacgtttgaccactcgtcttattcaaann 98
||||||||||||||||| |||||||| ||| | ||||||||||||||||||||||||
Sbjct: 17 ataatataagggattttgagtttttgtttgaactgtttgaccactcgtcttattcaaaag 76
Query: 99 nnnnngaaattattaattattttatttgtgacttactttattatctaaaatactttaagc 158
|||||||||| |||||| |||| |||||| |||||||||||||| || |||||||
Sbjct: 77 attttgaaattattatttattt-attt-tgacttgctttattatctaaagtattttaagc 134
Query: 159 ataacttttcattttttatatttgc 183
|||||||||| ||||||||||||||
Sbjct: 135 ataacttttcgttttttatatttgc 159
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
||||||| |||| |||||||||||||||||| |||||||| ||| | |||||||||||
Sbjct: 239 tactccccccgtcccataatataagggattttgagtttttggttgaactgtttgaccact 180
Query: 84 cgtcttatt 92
|||||||||
Sbjct: 179 cgtcttatt 171
>RF01058;MIR806;AACV01002156.1/2447-2686 39947:Oryza sativa Japonica
Group
Length = 240
Score = 135 bits (68), Expect = 4e-31
Identities = 135/159 (84%), Gaps = 3/159 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||||||||||| |||| | |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttaagtttttacttgcactgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| | |||||| || || | ||| |||||||||||||||||
Sbjct: 62 cgtcttattcaaaaaattttggaattat---tttttgtttttttgacttactttattatc 118
Query: 144 taaaatactttaagcataacttttcattttttatatttg 182
|||||||||||||||||||||||| |||| ||||||||
Sbjct: 119 caaaatactttaagcataacttttcgttttctatatttg 157
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| ||||||||||| |||||| ||||||||||| | |||||||||
Sbjct: 240 gtactccctccgtctcataatataaaagattttgagtttttgcttccactgtttgaccat 181
Query: 83 tcgtcttattcaaa 96
||||||||||||||
Sbjct: 180 tcgtcttattcaaa 167
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| |||||| | || ||||||| | ||||| ||||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacagtgcaagtaaaaacttaaaatcccttatattatgg 15
Query: 252 gacagagggagtag 265
||| ||||||||||
Sbjct: 14 gacggagggagtag 1
>RF01058;MIR806;AP008211.1/8180562-8180322 39947:Oryza sativa
Japonica Group
Length = 241
Score = 135 bits (68), Expect = 4e-31
Identities = 194/240 (80%), Gaps = 2/240 (0%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||| ||| | |||||||||||
Sbjct: 240 tactccctccgtcccataatataagggattttgagtttttgtttgcactgtttgaccact 181
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| | |||||||| | |||| |||||||||||||||||||||
Sbjct: 180 cgtcttattcaaaaatttttggaattatta--ttttttttttgtgacttactttattatc 123
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
||| ||||||||||| ||||| || ||||||||||||| ||||||||||||
Sbjct: 122 caaagtactttaagcacaacttgtcgttttttatatttgtacaatttttttgaataagac 63
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| ||||| | || ||||| ||||||| ||||||||| |||||| ||||||||
Sbjct: 62 gagtggtcaaatagtgcaaacaaaaactcaaaatcccttatattatgggacggagggagt 3
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 25 actccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccactc 84
||||||||||| |||||||||||||||||| |||||||| ||| | |||||||||||
Sbjct: 3 actccctccgtcccataatataagggattttgagtttttgtttgcactatttgaccactc 62
Query: 85 gtcttattcaaa 96
||||||||||||
Sbjct: 63 gtcttattcaaa 74
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| |||||| | || ||||| ||||||| ||||||||| |||
Sbjct: 168 tttgaataagacgagtggtcaaacagtgcaaacaaaaactcaaaatcccttatattatgg 227
Query: 252 gacagagggagtag 265
||| ||||||||||
Sbjct: 228 gacggagggagtag 241
>RF01058;MIR806;AAAA02022366.1/8512-8275 39946:Oryza sativa Indica
Group
Length = 238
Score = 135 bits (68), Expect = 4e-31
Identities = 194/241 (80%), Gaps = 5/241 (2%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
||||||||| || || ||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 2 tactccctctgtcccacaatataagggattttgagtttttgcttgtagtgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||| ||| |||||||||| ||| ||| |||||||||||||||||
Sbjct: 62 cgtcttatttaaaaaattttgaaattatta-----tttttttttgacttactttattatc 116
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
||| | ||||||||| || ||||| ||||||||||||| ||||||||||||
Sbjct: 117 aaaagtgctttaagcacaatttttcgttttttatatttgtataaattttttgaataagac 176
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| |||||| |||| ||||||| |||||| ||||||||| ||||| |||||||||
Sbjct: 177 aagtggtcaaacactacaagtaaaaacccaaaatcccttatattatgggaaagagggagt 236
Query: 264 a 264
|
Sbjct: 237 a 237
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 196 aataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggaca 255
|||||||| |||| |||||| |||| | ||||| ||||||| |||||||||||||||||
Sbjct: 70 aataagacgagtggtcaaacactacaagcaaaaactcaaaatcccttatattgtgggaca 11
Query: 256 gagggagta 264
|||||||||
Sbjct: 10 gagggagta 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 38 cataatataagggattttaagtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||||
Sbjct: 223 cataatataagggattttgggtttttacttgtagtgtttgaccacttgtcttattcaaa 165
>RF01062;MIR812;AAAA02025478.1/24577-24748 39946:Oryza sativa Indica
Group
Length = 172
Score = 133 bits (67), Expect = 2e-30
Identities = 137/164 (83%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| |||| ||| ||||||||||||||||||| ||| |||||||||| |||
Sbjct: 172 gtttttacttgcaacatttgaccactcgtcttatttaaaattttttgaaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||| ||||||||||||| ||||| ||||||||||||| |||||||| ||||||||
Sbjct: 112 ttttatttatgacttactttat-atctacaatactttaagcacaacttttcgttttttat 54
Query: 178 atttgcnnnnnnnntttgaataagactagtgatcaaacgttaca 221
|||||| ||| |||||||| |||||||||||||||||
Sbjct: 53 atttgcaaaaaaaatttaaataagacgagtgatcaaacgttaca 10
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
|||||| |||||||||||||| |||||||||||||
Sbjct: 1 gttttttcttgtaacgtttgatcactcgtcttatt 35
>RF01062;MIR812;AAAA02035816.1/557-386 39946:Oryza sativa Indica
Group
Length = 172
Score = 133 bits (67), Expect = 2e-30
Identities = 99/112 (88%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtga 129
||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 160 aacgtttgaccactcgtcttattcaaaaaattttaaaattattatttattttatttgtga 101
Query: 130 cttactttattatctaaaatactttaagcataacttttcattttttatattt 181
|||||||||||||||| | ||||||||||| ||||||||||||||||||||
Sbjct: 100 cttactttattatctacagtactttaagcactacttttcattttttatattt 49
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 66 ttgtaacgtttgaccactcgtcttattcaaa 96
|||||||||||||| ||||||||||||||||
Sbjct: 9 ttgtaacgtttgactactcgtcttattcaaa 39
>RF01062;MIR812;ABRL01000707.1/2129-1958 65489:Oryza barthii
Length = 172
Score = 133 bits (67), Expect = 2e-30
Identities = 108/124 (87%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
|||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||
Sbjct: 171 tttttgcttgcaacgtttgaccactcgtcttatttaaatttttttgaaattattatttat 112
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||||||||||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 111 tttatttgtgacttactttattatctaccgtactttaagtacaacttttcgttttttata 52
Query: 179 tttg 182
||||
Sbjct: 51 tttg 48
>RF01062;MIR812;AAAA02018550.1/1210-1039 39946:Oryza sativa Indica
Group
Length = 172
Score = 133 bits (67), Expect = 2e-30
Identities = 108/124 (87%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| ||||||| ||||||||||||||||||| ||| |||||||||| |||
Sbjct: 172 gtttttacttgtaatatttgaccactcgtcttatttaaaattttttgaaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||| ||||||||||||||||| | ||||||||||| |||||||||||||||||
Sbjct: 112 ttttatttgtaacttactttattatctacagtactttaagcacaacttttcattttttat 53
Query: 178 attt 181
||||
Sbjct: 52 attt 49
Score = 61.9 bits (31), Expect = 5e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
|||||| ||||||||||||||||||||||||||||
Sbjct: 1 gtttttacttgtaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AC025296.10/17042-16871 4530:Oryza sativa (rice)
Length = 172
Score = 133 bits (67), Expect = 2e-30
Identities = 108/124 (87%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
||||| |||| ||||||||||||||||||||||| ||| ||||||||| ||||
Sbjct: 171 tttttacttgcaacgtttgaccactcgtcttatttaaaaaaatttaaaattattatttat 112
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||||||||||||||||||| | || |||||||| ||||||||||||||||||
Sbjct: 111 tttatttgtgacttactttattatctacagtaatttaagcacaacttttcattttttata 52
Query: 179 tttg 182
||||
Sbjct: 51 tttg 48
>RF01062;MIR812;AACV01013079.1/2108-2281 39947:Oryza sativa Japonica
Group
Length = 174
Score = 133 bits (67), Expect = 2e-30
Identities = 108/124 (87%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
|||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 172 tttttcttgtaacgtttgaccacttgtcttatttaaaaaattttgaaattattaattatt 113
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
|||||||||| ||||||||||||||| | |||||||| || |||||||| ||||||||||
Sbjct: 112 ttatttgtgagttactttattatctacagtactttaaacacaacttttcgttttttatat 53
Query: 180 ttgc 183
||||
Sbjct: 52 ttgc 49
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaaa 39
>RF01058;MIR806;AP004672.3/59439-59196 39947:Oryza sativa Japonica
Group
Length = 244
Score = 133 bits (67), Expect = 2e-30
Identities = 135/160 (84%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| | |||||||||||||||| | ||||||||| || |||||||| |
Sbjct: 2 tactccctccgtcccctaatataagggattttgacattttgcttgcaatatttgaccatt 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
| ||||||||||| | |||||||| |||||||||||||||||||||||||||||
Sbjct: 62 catcttattcaaaaaattttggaattattatttattttatttgtgacttactttattatc 121
Query: 144 taaaatactttaagcataacttttcattttttatatttgc 183
||| ||||||| ||| ||||| |||||||||||||||||
Sbjct: 122 caaagtactttaggcacaacttgtcattttttatatttgc 161
Score = 58.0 bits (29), Expect = 7e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| | ||||| |||||||||| | ||||||||||| |||||||| |
Sbjct: 243 tactccctccgtcccctaatacaagggattttgatattttgcttgtactatttgaccatt 184
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 183 cgtcttattcaaa 171
>RF01062;MIR812;AP008215.1/16635749-16635577 39947:Oryza sativa
Japonica Group
Length = 173
Score = 131 bits (66), Expect = 6e-30
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
|||| ||||||| ||||||| |||||||||||||||| ||||||||| |||||
Sbjct: 171 tttttcttgtaatgtttgactactcgtcttattcaaaaaattttaaaattattatttatt 112
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
|||||||||||||||||||||||||| | || ||||||||||||||||| ||||||||||
Sbjct: 111 ttatttgtgacttactttattatctacagtattttaagcataacttttcgttttttatat 52
Query: 180 ttg 182
|||
Sbjct: 51 ttg 49
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 74 tttgaccactcgtcttattcaaa 96
|||||||||||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02017486.1/15008-15178 39946:Oryza sativa Indica
Group
Length = 171
Score = 131 bits (66), Expect = 6e-30
Identities = 98/111 (88%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
|||||||||||||||||||||||| |||||||||| ||||||| || |||||||
Sbjct: 156 gtttgaccactcgtcttattcaaaacattttgaaattattatttatttttttcgtgactt 97
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgc 183
||||||||||| ||||||||||||||| |||||||| ||||||||||||||
Sbjct: 96 actttattatccaaaatactttaagcacaacttttcgttttttatatttgc 46
>RF01062;MIR812;AACV01016994.1/6652-6822 39947:Oryza sativa Japonica
Group
Length = 171
Score = 131 bits (66), Expect = 6e-30
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
||||| ||| |||||||| ||||||||||||||| ||| |||||||||||||||
Sbjct: 170 ttttttcttctaacgtttaaccactcgtcttatttaaaattttttgaaattattaattat 111
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||||||||||||||||||| | ||||||||||| || ||||| |||||||||
Sbjct: 110 tttatttgtgacttactttattatctatagtactttaagcacaaattttcgttttttata 51
Query: 179 ttt 181
|||
Sbjct: 50 ttt 48
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
||||||||||| ||||||||||||||| ||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcatcttattcaa 38
>RF01062;MIR812;AACV01002753.1/4109-4282 39947:Oryza sativa Japonica
Group
Length = 174
Score = 131 bits (66), Expect = 6e-30
Identities = 111/127 (87%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgttt-gaccactcgtcttattcaaannnnnnngaaattattaatt 116
||||||||||||||||||| ||||||| ||||||||||| ||||||||| ||
Sbjct: 174 gtttttgcttgtaacgttttgaccacttgtcttattcaacaaattttaaaattattattt 115
Query: 117 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 176
||||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||||
Sbjct: 114 attttatttgtgacttactttattatctacagtactttaagcacaacttttcgtttttta 55
Query: 177 tatttgc 183
|||||||
Sbjct: 54 tatttgc 48
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgttttattcaa 38
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 131 bits (66), Expect = 6e-30
Identities = 197/242 (81%), Gaps = 6/242 (2%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| ||||||||||| |||||| ||||||| |||||| |||||||||||
Sbjct: 238 tactccctccgtcccataatataagagattttgagtttttccttgtactgtttgaccact 179
Query: 84 cgtcttattcaaannnnnnngaaat-tattaattattttatttgtgacttactttattat 142
||||||||||||| |||| | | | |||||| || ||||||||||||||||
Sbjct: 178 cgtcttattcaaaaaaaa---aaatggaattactattttgtt--tgacttactttattat 124
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
||||| ||| ||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 123 ctaaagtacattaagcacaacttttcgttttttatatttgcacaaattttttgaataaga 64
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| |||| |||||| |||| | ||||| ||||||| ||||||||| |||||| |||||||
Sbjct: 63 cgagtggtcaaacagtacaagcaaaaactcaaaatcccttatattatgggacggagggag 4
Query: 263 ta 264
||
Sbjct: 3 ta 2
Score = 105 bits (53), Expect = 3e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttttgcttgtactgtttgaccact 61
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 62 cgtcttattcaaa 74
Score = 58.0 bits (29), Expect = 7e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| |||||| |||| | ||||| ||||||| |||||||| |||
Sbjct: 166 tttgaataagacgagtggtcaaacagtacaaggaaaaactcaaaatctcttatattatgg 225
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 226 gacggagggagta 238
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa Japonica
Group
Length = 239
Score = 131 bits (66), Expect = 6e-30
Identities = 197/242 (81%), Gaps = 6/242 (2%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| ||||||||||| |||||| ||||||| |||||| |||||||||||
Sbjct: 2 tactccctccgtcccataatataagagattttgagtttttccttgtactgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaat-tattaattattttatttgtgacttactttattat 142
||||||||||||| |||| | | | |||||| || ||||||||||||||||
Sbjct: 62 cgtcttattcaaaaaaaa---aaatggaattactattttgtt--tgacttactttattat 116
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
||||| ||| ||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 117 ctaaagtacattaagcacaacttttcgttttttatatttgcacaaattttttgaataaga 176
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| |||| |||||| |||| | ||||| ||||||| ||||||||| |||||| |||||||
Sbjct: 177 cgagtggtcaaacagtacaagcaaaaactcaaaatcccttatattatgggacggagggag 236
Query: 263 ta 264
||
Sbjct: 237 ta 238
Score = 105 bits (53), Expect = 3e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 238 tactccctccgtcccataatataagggattttgagtttttgcttgtactgtttgaccact 179
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 178 cgtcttattcaaa 166
Score = 58.0 bits (29), Expect = 7e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| |||||| |||| | ||||| ||||||| |||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacagtacaaggaaaaactcaaaatctcttatattatgg 15
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01058;MIR806;AP008210.1/18547508-18547751 39947:Oryza sativa
Japonica Group
Length = 244
Score = 131 bits (66), Expect = 6e-30
Identities = 196/243 (80%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| | |||||||||||||||| | |||| ||| || |||||||||
Sbjct: 1 gtactccctccgtcccctaatataagggattttgatattttacttatactgtttgaccat 60
Query: 83 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaaatttggaattattatttattttatttgtgacttactttattat 120
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
| ||| ||| |||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 121 ccaaagtaccttaagcgcaacttttcgttttttatatttgcacaaattttttgaataaga 180
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatatt-gtgggacagaggga 261
| |||| |||||| | || | |||| |||||||| |||| |||| | ||||| ||||||
Sbjct: 181 cgagtggtcaaacagtgcaagcaaaatatcaaaatcccttttattggggggacggaggga 240
Query: 262 gta 264
|||
Sbjct: 241 gta 243
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 41 aatataagggattttaagtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||| |||||||||| | ||||||||| | ||||||||||||||||||||||||
Sbjct: 225 aataaaagggattttgatattttgcttgcactgtttgaccactcgtcttattcaaa 170
Score = 50.1 bits (25), Expect = 2e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| | || |||||| || | |||||| |||||||| ||||||||| ||
Sbjct: 74 tttgaataagacgaatggtcaaacagtataagtaaaatatcaaaatcccttatattaggg 15
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 14 gacggagggagta 2
>RF01062;MIR812;AAAA02019003.1/8410-8580 39946:Oryza sativa Indica
Group
Length = 171
Score = 129 bits (65), Expect = 2e-29
Identities = 100/114 (87%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtga 129
||||||||||| || |||||||||||| |||||||||| |||||||||||||||
Sbjct: 159 aacgtttgacctcttgtcttattcaaaattttttgaaattattatttattttatttgtga 100
Query: 130 cttactttattatctaaaatactttaagcataacttttcattttttatatttgc 183
|||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 99 cttactttattatctaccgtactttaagcataacttttcgttttttatatttgc 46
>RF01062;MIR812;AAAA02000569.1/44845-44673 39946:Oryza sativa Indica
Group
Length = 173
Score = 129 bits (65), Expect = 2e-29
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| |||||||||||||||| |||||||||| |||||||||| |||
Sbjct: 173 gtttttgcttgcaacgtttgaccactcggcttattcaaaaatttttgaaattattattta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||||||||||||||||||||| | | ||||||||| | |||||||| ||||||||
Sbjct: 113 ttttatttgtgacttactttattattcacagtactttaagtacaacttttcgttttttat 54
Query: 178 atttgc 183
||||||
Sbjct: 53 atttgc 48
>RF01062;MIR812;AC145325.3/42995-43168 39947:Oryza sativa Japonica
Group
Length = 174
Score = 129 bits (65), Expect = 2e-29
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| |||||||||| |||||| ||||||||| |||||||||| |||
Sbjct: 174 gtttttgcttgcaacgtttgactactcgttttattcaaaatattttgaaattattattta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | |||||||| || ||||||| ||||||||
Sbjct: 114 ttttatttgtgacttactttattatctatagtactttaaccacaactttttgttttttat 55
Query: 178 atttgc 183
||||||
Sbjct: 54 atttgc 49
>RF01062;MIR812;AAAA02011062.1/27832-28005 39946:Oryza sativa Indica
Group
Length = 174
Score = 129 bits (65), Expect = 2e-29
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 174 gtttttgcttacaacgtttgaccactcgtcttattcaaaattttttaaaattattaatta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||||||||||| |||||||||||| | || ||||||| |||||||| ||||||||
Sbjct: 114 ttttatttgtgacttgctttattatctacagtattttaagctcaacttttcgttttttat 55
Query: 178 atttgc 183
||||||
Sbjct: 54 atttgc 49
>RF01062;MIR812;AAAA02034869.1/21771-21600 39946:Oryza sativa Indica
Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| |||| ||||||||| |||| |||||||||||| ||||||||| |||
Sbjct: 172 gtttttacttgcaacgtttgaacacttgtcttattcaaaaaattttaaaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||||||
Sbjct: 112 ttttatttgtgacttattttattatctacaatactttaaacataacttttcactttttat 53
Query: 178 atttgc 183
||||||
Sbjct: 52 atttgc 47
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
|||||| |||| ||||||||| |||||||||||||
Sbjct: 1 gtttttacttgcaacgtttgatcactcgtcttatt 35
>RF01062;MIR812;AACV01003822.1/5854-6022 39947:Oryza sativa Japonica
Group
Length = 169
Score = 129 bits (65), Expect = 2e-29
Identities = 106/122 (86%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
|||| |||| ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 167 ttttacttgcaacgtttgaccactcgtcttattcaaatttttttgaaattattatttatt 108
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
||||||||||||||||||||||| || | |||||||| || |||||||| ||||||||||
Sbjct: 107 ttatttgtgacttactttattatgtatagtactttaaacacaacttttcgttttttatat 48
Query: 180 tt 181
||
Sbjct: 47 tt 46
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||||||| ||||||| |||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttaaccactcgtcttatt 35
>RF01062;MIR812;AL731589.3/75309-75482 39947:Oryza sativa Japonica
Group
Length = 174
Score = 129 bits (65), Expect = 2e-29
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| |||||||| |||||||||||||||||||||| |||||||||| |||
Sbjct: 174 gtttttgattgtaacgattgaccactcgtcttattcaaatttttttgaaattattattta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||| ||||||| ||||||||||| ||||||||||||| || ||| | ||||||||
Sbjct: 114 ttttatttatgacttattttattatctacaatactttaagcacaattttacgttttttat 55
Query: 178 atttgc 183
||||||
Sbjct: 54 atttgc 49
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgattgtaacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02010595.1/33394-33562 39946:Oryza sativa Indica
Group
Length = 169
Score = 129 bits (65), Expect = 2e-29
Identities = 106/122 (86%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| |||||||||||||| |||||||||||| |||||||| | |||
Sbjct: 169 gtttttgcttgcaacgtttgaccactagtcttattcaaatttttttgaaattatgagtta 110
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||||||||||| |||||||||||| | || ||||||||||||||||| ||||||||
Sbjct: 109 ttttatttgtgacttcctttattatctatagtattttaagcataacttttcgttttttat 50
Query: 178 at 179
||
Sbjct: 49 at 48
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
||||||| ||| ||||||||||||||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtcttattcaa 38
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 192 tttgaataagactagtgatcaaacgtt 218
||||||||||||||||| |||||||||
Sbjct: 131 tttgaataagactagtggtcaaacgtt 157
>RF01062;MIR812;AAAA02027656.1/553-725 39946:Oryza sativa Indica
Group
Length = 173
Score = 129 bits (65), Expect = 2e-29
Identities = 103/118 (87%)
Strand = Plus / Minus
Query: 65 cttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatt 124
|||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 166 cttgtaacatttgaccactcgtcttatttaaaaaattttaaaattattatttattttatt 107
Query: 125 tgtgacttactttattatctaaaatactttaagcataacttttcattttttatatttg 182
||||||||| ||||||||||| ||||||| ||| ||||||||||||||||||||||||
Sbjct: 106 tgtgacttattttattatctacaatacttcaagtataacttttcattttttatatttg 49
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 67 tgtaacgtttgaccactcgtcttattcaa 95
||||| |||||||||||||||||||||||
Sbjct: 10 tgtaatgtttgaccactcgtcttattcaa 38
>RF01062;MIR812;AP004632.3/138567-138739 39947:Oryza sativa Japonica
Group
Length = 173
Score = 129 bits (65), Expect = 2e-29
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| ||||||||||||||||||||| ||||| |||||||||| |||
Sbjct: 173 gtttttgcttgcaacgtttgaccactcgtcttaatcaaaaaattttgaaattattattta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||| ||||||||||||||||||| | || |||||||| ||||||| ||||||||
Sbjct: 113 ttttatttatgacttactttattatctacagtattttaagcacaactttttgttttttat 54
Query: 178 atttgc 183
||||||
Sbjct: 53 atttgc 48
>RF01062;MIR812;AAAA02011387.1/17306-17134 39946:Oryza sativa Indica
Group
Length = 173
Score = 127 bits (64), Expect = 9e-29
Identities = 133/161 (82%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| || ||||||| ||||||||||||||| ||||||||||||||
Sbjct: 173 gtttttgcttgcaatgtttgacaactcgtcttattcaacaaaatttgaaattattaatta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||| |||||||||||||| | ||||||||||| |||||||| ||||| ||
Sbjct: 113 ttttatttgtgatatactttattatctatagtactttaagcacaacttttcgtttttaat 54
Query: 178 atttgcnnnnnnnntttgaataagactagtgatcaaacgtt 218
|||||| |||||||||||| |||| |||||||||
Sbjct: 53 atttgcaaaaaaaatttgaataagacgagtggtcaaacgtt 13
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttacaacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AP005387.3/148274-148447 39947:Oryza sativa Japonica
Group
Length = 174
Score = 127 bits (64), Expect = 9e-29
Identities = 128/153 (83%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnn-gaaattattaattattttatttgtg 128
||||||| ||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 162 aacgtttaaccactcgtcttattcaaacacattttgaaattattatttattttatttgtg 103
Query: 129 acttactttattatctaaaatactttaagcataacttttcattttttatatttgcnnnnn 188
||||||||||||||||| | ||||||||||| |||||||| |||||||||||||
Sbjct: 102 acttactttattatctacagtactttaagcacaacttttcgttttttatatttgtaaaaa 43
Query: 189 nnntttgaataagactagtgatcaaacgttaca 221
||||||||||| |||||||||||||||||
Sbjct: 42 aaaattgaataagacgagtgatcaaacgttaca 10
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaa 95
|||||| ||||||||||||| ||||||||||||||||
Sbjct: 2 tttttgtttgtaacgtttgatcactcgtcttattcaa 38
>RF01062;MIR812;AP008208.1/33215908-33216080 39947:Oryza sativa
Japonica Group
Length = 173
Score = 127 bits (64), Expect = 9e-29
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
||||||||| |||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 158 gtttgaccattcgtcttattcaaaaaaaattgaaattattatttgttttatttgtgactt 99
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnnt 192
||||||||||| | | ||||||||||| |||||||| |||||||||||||| |
Sbjct: 98 actttattatccacagtactttaagcacaacttttcgttttttatatttgcacaaatttt 39
Query: 193 ttgaataagactagtgatcaaacgttaca 221
||||||||||| |||| ||||||||||||
Sbjct: 38 ttgaataagacgagtggtcaaacgttaca 10
Score = 61.9 bits (31), Expect = 5e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 66 ttgtaacgtttgaccactcgtcttattcaaa 96
|||||||||||||||||||||||||||||||
Sbjct: 9 ttgtaacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01010959.1/9597-9425 39947:Oryza sativa Japonica
Group
Length = 173
Score = 127 bits (64), Expect = 9e-29
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 125 aattattatttattttatttgtgacttactttattatctacagtactttaagcataactt 66
Query: 166 ttcattttttatatttgcnnnnnnnntttgaataagactagtgatcaaacgttacatgta 225
||| |||||||||||||| ||| |||||||| |||| ||||||||| || |||
Sbjct: 65 ttcgttttttatatttgcgaaaaaattttaaataagacgagtggtcaaacgttgcaagta 6
Query: 226 aaaa 229
||||
Sbjct: 5 aaaa 2
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
|||||| |||| |||||||||||||||||||||||
Sbjct: 1 gtttttacttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AP008207.1/7747472-7747302 39947:Oryza sativa
Japonica Group
Length = 171
Score = 127 bits (64), Expect = 9e-29
Identities = 142/172 (82%), Gaps = 2/172 (1%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| ||| ||||||||||||||| ||||||||||| |||||||||| |||
Sbjct: 171 gtttttgtttgcaacgtttgaccactcatcttattcaaaattttttgaaattattattta 112
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||| ||||||||||||||||| | | || |||||||| |||||||||||||||||
Sbjct: 111 ttttatttatgacttactttattatccacagtattttaagcacaacttttcattttttat 52
Query: 178 atttgcnnnnnnnntttgaataagactagtgatcaaacgttacatgtaaaaa 229
|||| |||||||||||| ||||||||||||| ||| |||||||
Sbjct: 51 attt--aaaaaaattttgaataagacgagtgatcaaacgtaacaagtaaaaa 2
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||| ||||| |||||||| |||||||||||||||||
Sbjct: 1 gtttttacttgttacgtttgatcactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02023753.1/2650-2478 39946:Oryza sativa Indica
Group
Length = 173
Score = 125 bits (63), Expect = 4e-28
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||||||||||||||||||||||||||||||||| | |||| ||||||
Sbjct: 173 gtttttgcttgtaacgtttgaccactcgtcttattcgctattttttgcgattagtaatta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|| ||| || |||||||||||||||||| | ||||||||||| |||||||||||||||||
Sbjct: 113 ttgtatgtgggacttactttattatctatagtactttaagcacaacttttcattttttat 54
Query: 178 atttgcnnnnnnnntttgaataagactagtgatcaaacgttaca 221
|||||| |||||||||||| |||| ||||||||||||
Sbjct: 53 atttgcaaaaaaaatttgaataagacgagtggtcaaacgttaca 10
Score = 77.8 bits (39), Expect = 8e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01004534.1/3266-3096 39947:Oryza sativa Japonica
Group
Length = 171
Score = 125 bits (63), Expect = 4e-28
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
|||| ||| ||||||||||||||||| ||||||||| |||||||||| |||||
Sbjct: 169 tttttcttataacgtttgaccactcgaattattcaaaaatttttgaaattattatttatt 110
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
||||||||||||||||||||| |||| | ||||||||||| |||||||| ||||||||||
Sbjct: 109 ttatttgtgacttactttattgtctacagtactttaagcacaacttttcgttttttatat 50
Query: 180 ttgc 183
||||
Sbjct: 49 ttgc 46
Score = 61.9 bits (31), Expect = 5e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgattgtaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02004443.1/24290-24120 39946:Oryza sativa Indica
Group
Length = 171
Score = 125 bits (63), Expect = 4e-28
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| |||||||||||||||| || ||||||||||| ||||||||| |||
Sbjct: 171 gtttttgtttgtaacgtttgaccaatcatcttattcaaaaaaatttaaaattattattta 112
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 111 ttttatttgtgacttactttattatccacggtactttaagtataacttttcattttttat 52
Query: 178 attt 181
||||
Sbjct: 51 attt 48
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 aacgtttgaccactcgtcttattca 94
|||||||||||||||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttattca 37
>RF01062;MIR812;AAAA02020519.1/16817-16988 39946:Oryza sativa Indica
Group
Length = 172
Score = 125 bits (63), Expect = 4e-28
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||
Sbjct: 171 tttttgcttgtaacgttggaccactcgttttattcaaaattttttgaaattattatttat 112
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||||||||||||||||| | | ||||||||||| ||||||| ||||| |||
Sbjct: 111 tttatttgtgacttactttattatccacagtactttaagcacaactttttgtttttaata 52
Query: 179 tttg 182
||||
Sbjct: 51 tttg 48
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattc 93
|||||||||||||||||||||||| |||| ||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccattcgtattattc 36
>RF01062;MIR812;AAAA02003779.1/4099-3929 39946:Oryza sativa Indica
Group
Length = 171
Score = 125 bits (63), Expect = 4e-28
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
|||||||||||||||||||||||||||||||||| ||| ||||||||| ||||
Sbjct: 170 tttttgcttgtaacgtttgaccactcgtcttatttaaaattttttaaaattattatttat 111
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
|||||||||||| || ||||||||||| | |||||||| || |||||||| |||||||||
Sbjct: 110 tttatttgtgacctattttattatctacagtactttaaacacaacttttcgttttttata 51
Query: 179 tttg 182
||||
Sbjct: 50 tttg 47
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||| ||| |||||||||| ||||||||||||
Sbjct: 1 gtttttgtttgcaacgtttgactactcgtcttatt 35
>RF01062;MIR812;AP008212.1/16608912-16609085 39947:Oryza sativa
Japonica Group
Length = 174
Score = 125 bits (63), Expect = 4e-28
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
||||||||| | |||||||||||||||||||||||| | |||||||| |||||
Sbjct: 172 ttttgcttgcactgtttgaccactcgtcttattcaaaaaattttggaattattatttatt 113
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
|||||||||||||||||||||||| ||| ||||||||||| || ||||| ||||||||||
Sbjct: 112 ttatttgtgacttactttattatccaaagtactttaagcacaagttttcgttttttatat 53
Query: 180 ttgc 183
||||
Sbjct: 52 ttgc 49
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 cttgtaacgtttgaccactcgtctt 89
|||||||||||||||||||||||||
Sbjct: 8 cttgtaacgtttgaccactcgtctt 32
>RF01062;MIR812;AAAA02007162.1/13852-14024 39946:Oryza sativa Indica
Group
Length = 173
Score = 125 bits (63), Expect = 4e-28
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
||||| ||||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 171 ttttgtttgtaacgtttgaccactcgtcttatttaaaaatttttgaaattattatttatt 112
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
|||| ||||||||||||||||||||| | ||||||||| | ||||||| ||||||||||
Sbjct: 111 ttatctgtgacttactttattatctacagtactttaagtgtgacttttcgttttttatat 52
Query: 180 ttgc 183
||||
Sbjct: 51 ttgc 48
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||| ||| |||||||||| ||||||||||||
Sbjct: 1 gtttttgtttgcaacgtttgactactcgtcttatt 35
>RF01062;MIR812;AP006554.2/116160-116331 39947:Oryza sativa Japonica
Group
Length = 172
Score = 125 bits (63), Expect = 4e-28
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
|||||||| ||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 170 ttttgcttacaacgtttgatcactcgtcttattcaaatttttttgaaattattaattatt 111
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
||||||||||||| |||||||| || | ||||||||||| ||||||| |||||||||||
Sbjct: 110 ttatttgtgacttcatttattatttacagtactttaagcacaactttttattttttatat 51
Query: 180 ttgc 183
||||
Sbjct: 50 ttgc 47
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
||||||||||| || ||||||||| |||||||||||||
Sbjct: 1 gtttttgcttgcaatgtttgaccattcgtcttattcaa 38
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 192 tttgaataagactagtgatcaaacgtt 218
|||||||||||| ||||||||||||||
Sbjct: 134 tttgaataagacgagtgatcaaacgtt 160
>RF01062;MIR812;AACV01002952.1/2774-2943 39947:Oryza sativa Japonica
Group
Length = 170
Score = 125 bits (63), Expect = 4e-28
Identities = 108/124 (87%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
||||||||| ||||||||||||||||||||| |||| |||||||||| |||||
Sbjct: 168 ttttgcttgcaacgtttgaccactcgtcttactcaa-tttttttgaaattattatttatt 110
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
|||||||||| ||||||||||||| | | |||||||| ||||||||||||||||||||||
Sbjct: 109 ttatttgtgatttactttattatccacagtactttaaacataacttttcattttttatat 50
Query: 180 ttgc 183
||||
Sbjct: 49 ttgc 46
>RF01058;MIR806;AACV01010642.1/18111-18350 39947:Oryza sativa
Japonica Group
Length = 240
Score = 125 bits (63), Expect = 4e-28
Identities = 195/241 (80%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||| ||||| ||||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 2 tactccatccgtcccataatataagggatttggagtttttgcttgcaccgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
| ||||||| ||| |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 62 catcttattaaaaaaatt--gaaattattatttaattt-tttgtgacttactttattatc 118
Query: 144 taaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataagac 203
||| ||||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 119 caaagtactttaagtgcaacttttcgttttttatatttgcacaaattttttgaataagac 178
Query: 204 tagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagt 263
|||| |||||| | | ||||| ||||||| ||||||||| |||||| ||||||||
Sbjct: 179 gagtggtcaaacaaagtaagcaaaaactcaaaatcccttatattatgggacggagggagt 238
Query: 264 a 264
|
Sbjct: 239 a 239
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 240 gtactccctccgtcccataatataagggattttgagtttttgcttactttgtttgaccac 181
Query: 83 tcgtcttattcaaa 96
||||||||||||||
Sbjct: 180 tcgtcttattcaaa 167
>RF01062;MIR812;AAAA02025228.1/28145-27974 39946:Oryza sativa Indica
Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
||||||| |||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 157 gtttgactactcgtcttattcaaaattttttaaaattattatttattttatttgtgactt 98
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgc 183
||||||||||||| | ||||||||||| || ||||||||||||||||||||
Sbjct: 97 actttattatctatagtactttaagcacaatttttcattttttatatttgc 47
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01006032.1/3007-2837 39947:Oryza sativa Japonica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 109/126 (86%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| | |||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 171 gtttttacatgtaacgtttgaccactcgtcttattcaaatttttttgaaattattattta 112
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||||||||||||| ||||||||| | |||||||| || ||||||| |||||||||
Sbjct: 111 ttttatttgtgacttac--tattatctacagtactttaaacacaactttttattttttat 54
Query: 178 atttgc 183
||||||
Sbjct: 53 atttgc 48
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattca 94
||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gtttttgattgtaacgtttgaccactcgtcttattca 37
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaa 229
|||||||||||| |||| ||||||||||||||||||||
Sbjct: 133 tttgaataagacgagtggtcaaacgttacatgtaaaaa 170
>RF01062;MIR812;AL713939.6/126032-126207 4530:Oryza sativa (rice)
Length = 176
Score = 123 bits (62), Expect = 1e-27
Identities = 110/127 (86%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| ||| |||||||||||||||||||| |||||| |||||||| | |||
Sbjct: 176 gtttttgtttgcaacgtttgaccactcgtcttgttcaaaattttttgaaattatcattta 117
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttc-atttttta 176
|||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||||
Sbjct: 116 ttttatttgtgacttactttattatctacagtactttaagcacaacttttcgttttttta 57
Query: 177 tatttgc 183
|||||||
Sbjct: 56 tatttgc 50
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
||||||||||| | ||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcagcgtttgaccactcgtcttattcaa 38
>RF01062;MIR812;AL663019.2/48460-48289 39947:Oryza sativa Japonica
Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 106/123 (86%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||||||| |||||||||||| |||||||||||||| ||||||||| |||
Sbjct: 172 gtttttgcttataacgtttgacctttcgtcttattcaaaaaattttaaaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||||||
Sbjct: 112 ttttatttgtgacttactttattatctacagtactttaagcacaactttttgttttttat 53
Query: 178 att 180
|||
Sbjct: 52 att 50
Score = 48.1 bits (24), Expect = 7e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaa 95
||||| ||| ||||||||| ||||||||||||||||
Sbjct: 3 ttttgtttgcaacgtttgatcactcgtcttattcaa 38
>RF01058;MIR806;AP008214.1/15639424-15639183 39947:Oryza sativa
Japonica Group
Length = 242
Score = 123 bits (62), Expect = 1e-27
Identities = 134/159 (84%), Gaps = 1/159 (0%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
||||| |||||| |||||||||||||||||| |||||||| || | |||||||||||
Sbjct: 2 tactctctccgtcccataatataagggattttgagtttttgtgtgaactgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||| ||| | |||||||| |||||| |||| |||||||||||||||||
Sbjct: 62 cgtcttattaaaaaatttttggaattattatttattt-atttttgacttactttattatc 120
Query: 144 taaaatactttaagcataacttttcattttttatatttg 182
|||| |||||||||| |||||||| |||||||||||||
Sbjct: 121 taaagtactttaagcgcaacttttcgttttttatatttg 159
Score = 61.9 bits (31), Expect = 5e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 39 ataatataagggatttta-agtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||||||||| |||||||| ||| | ||||||||||||||||||||||||
Sbjct: 226 ataatataagggatttttgagtttttggttgaactgtttgaccactcgtcttattcaaa 168
>RF01062;MIR812;AAAA02005674.1/20425-20258 39946:Oryza sativa Indica
Group
Length = 168
Score = 121 bits (61), Expect = 6e-27
Identities = 105/122 (86%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
|||| |||||||||||||||||||||||||||| ||| ||||||||| |||||
Sbjct: 166 ttttacttgtaacgtttgaccactcgtcttatttaaatttttttaaaattattatttatt 107
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
||||||||||||||||||||||| || | ||||| ||||| ||||||| |||||||||||
Sbjct: 106 ttatttgtgacttactttattatgtatagtacttcaagcacaactttttattttttatat 47
Query: 180 tt 181
||
Sbjct: 46 tt 45
>RF01062;MIR812;ABRL01002103.1/5388-5215 65489:Oryza barthii
Length = 174
Score = 121 bits (61), Expect = 6e-27
Identities = 108/126 (85%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| | ||||||||| |||||||||||||| |||||||| |||
Sbjct: 174 gtttttgcttgcactgtttgaccattcgtcttattcaaaaaatttcagaattattattta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||| ||||||||||||||||||||||||||||||||||||| |||||| | ||||||||
Sbjct: 114 ttttctttgtgacttactttattatctaaaatactttaagcacaactttccgttttttat 55
Query: 178 atttgc 183
||||||
Sbjct: 54 atttgc 49
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
||||||||||| || |||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaatgtttgaccactcgtcttattcaa 38
>RF01062;MIR812;AAAA02011350.1/21929-21758 39946:Oryza sativa Indica
Group
Length = 172
Score = 121 bits (61), Expect = 6e-27
Identities = 108/126 (85%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| ||| ||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 172 gtttttgtttgcaacgtttgaccactcgtcttattcaaaatttgttgaaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||||||||||||||||| |||||| | ||||| | || |||||||| ||||||||
Sbjct: 112 ttttatttgtgacttactttactatctacagtacttccaccacaacttttcgttttttat 53
Query: 178 atttgc 183
||||||
Sbjct: 52 atttgc 47
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||||||||||||||||| ||||| |||||||
Sbjct: 1 gtttttgcttgtaacgtttgatcactcatcttatt 35
>RF01062;MIR812;AL662934.3/50208-50378 39947:Oryza sativa Japonica
Group
Length = 171
Score = 121 bits (61), Expect = 6e-27
Identities = 109/126 (86%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| ||| |||||||||||||| |||||||||||| ||||||||| |||
Sbjct: 171 gtttttgtttgcaacgtttgaccacttgtcttattcaaatttttt--aaattattattta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||| ||||||||||||||||||| | ||||||||||| |||||||||||||| ||
Sbjct: 113 ttttatttatgacttactttattatctacagtactttaagcacaacttttcatttttcat 54
Query: 178 atttgc 183
||||||
Sbjct: 53 atttgc 48
>RF01062;MIR812;AACV01022520.1/58374-58200 39947:Oryza sativa
Japonica Group
Length = 175
Score = 121 bits (61), Expect = 6e-27
Identities = 110/128 (85%), Gaps = 3/128 (2%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| ||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 175 gtttttacttgtaacgtttgtccactcgtcttattcaaatttttttgaaattattaatta 116
Query: 118 ttttatttgtgacttactttattatc---taaaatactttaagcataacttttcattttt 174
||||||||||||||||||||||||| || | ||||||||||| || ||||| |||||
Sbjct: 115 ttttatttgtgacttactttattattatatacagtactttaagcacaatttttcgttttt 56
Query: 175 tatatttg 182
||||||||
Sbjct: 55 tatatttg 48
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AP006523.2/118080-118251 39947:Oryza sativa Japonica
Group
Length = 172
Score = 121 bits (61), Expect = 6e-27
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 66 ttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttattt 125
|||||||||||||| |||||||||||| ||| ||||||||| |||||||||||
Sbjct: 164 ttgtaacgtttgactactcgtcttatttaaatctttttaaaattattatttattttattt 105
Query: 126 gtgacttactttattatctaaaatactttaagcataacttttcattttttatatttgc 183
|||| ||||||||||||||| | |||||||| ||||||||||| ||||||||||||||
Sbjct: 104 gtgaattactttattatctacagtactttaatcataacttttcgttttttatatttgc 47
>RF01062;MIR812;AACV01016049.1/9539-9711 39947:Oryza sativa Japonica
Group
Length = 173
Score = 121 bits (61), Expect = 6e-27
Identities = 107/125 (85%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| ||||||||||||||||||||||||||||||| | || |||||||| | ||
Sbjct: 126 aaattattatttattttatttgtgacttactttattatctacagtattttaagcacatct 67
Query: 165 tttcattttttatatttgcnnnnnnnntttgaataagactagtgatcaaacgttacatgt 224
|||| |||||||||||||| |||||||||||| |||| |||||||||||| ||
Sbjct: 66 tttcgttttttatatttgcaaaaaaaatttgaataagacgagtggtcaaacgttacaagt 7
Query: 225 aaaaa 229
|||||
Sbjct: 6 aaaaa 2
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 gtttttacttgtaacgtttgaccactcgtcttattcaaa 39
>RF01058;MIR806;AAAA02014047.1/6193-6435 39946:Oryza sativa Indica
Group
Length = 243
Score = 121 bits (61), Expect = 6e-27
Identities = 198/245 (80%), Gaps = 4/245 (1%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagttttt--gcttgtaacgtttgacc 80
||||||||| ||| |||||||||||||||||| | ||||| ||| | | ||||||||
Sbjct: 1 gtactcccttcgtcccataatataagggattttgactttttttgctggcactgtttgacc 60
Query: 81 actcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttatt 140
| |||||||||||||| | |||||||| ||||||||||| ||||| ||||||||
Sbjct: 61 attcgtcttattcaaaaaattttggaattattatttattttatttatgact-actttatt 119
Query: 141 atctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataa 200
||| ||| ||||||||||| ||| |||| |||||||||||||| |||||||||
Sbjct: 120 atccaaagtactttaagcacaac-tttcgttttttatatttgcacaaattttttgaataa 178
Query: 201 gactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagaggg 260
||| ||| |||||| | || ||||||| ||||||| ||||||||| |||||| |||||
Sbjct: 179 gacgagtagtcaaacagtgcaagtaaaaagtcaaaatcccttatattatgggacggaggg 238
Query: 261 agtag 265
|||||
Sbjct: 239 agtag 243
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| | ||||| |||| | ||||||| |||
Sbjct: 242 tactccctccgtcccataatataagggattttgactttttacttgcactgtttgactact 183
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 182 cgtcttattcaaa 170
>RF01062;MIR812;AAAA02011276.1/7207-7036 39946:Oryza sativa Indica
Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 107/125 (85%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| |||||||||||||| ||||||||||||||||| ||| ||||| |||
Sbjct: 172 gtttttacttgtaacgtttgatcactcgtcttattcaaatttttttaaaactattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | |||||||||| |||||||| | ||||||
Sbjct: 112 ttttatttgtgacttactttattatctacagaactttaagcacaacttttcgtcttttat 53
Query: 178 atttg 182
|||||
Sbjct: 52 atttg 48
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaa 229
|||||||||||| ||||||||||||||||| |||||||
Sbjct: 134 tttgaataagacgagtgatcaaacgttacaagtaaaaa 171
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||| ||| ||||||||||||||||||| |||||||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtctcattcaaa 39
>RF01062;MIR812;AAAA02034323.1/17590-17763 39946:Oryza sativa Indica
Group
Length = 174
Score = 119 bits (60), Expect = 2e-26
Identities = 107/125 (85%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||| ||||| |||||||| |||||| |||||||||||| |||||||||| |||
Sbjct: 174 gtttctgcttataacgtttaaccacttgtcttattcaaaaatttttgaaattattattta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||| ||||||||||||||| | ||||||||||| ||||||| ||||||||
Sbjct: 114 ttttatttgtgatttactttattatctacagtactttaagcacaactttttattttttaa 55
Query: 178 atttg 182
|||||
Sbjct: 54 atttg 50
>RF01062;MIR812;AACV01015146.1/17582-17413 39947:Oryza sativa
Japonica Group
Length = 170
Score = 119 bits (60), Expect = 2e-26
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
||||||||||| |||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 155 gtttgaccacttgtcttattcaaaaaattttgaaattattatttattttatttgtgactt 96
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatattt 181
|||||||||| || ||||||||||||| ||||||| ||||||||||||
Sbjct: 95 actttattatatataatactttaagcacaactttttgttttttatattt 47
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
|||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01003520.1/10218-10389 39947:Oryza sativa
Japonica Group
Length = 172
Score = 119 bits (60), Expect = 2e-26
Identities = 107/125 (85%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| |||| ||||||||||||||||||||||||||| ||| ||||| |
Sbjct: 172 gtttttacttgcaacgtttgaccactcgtcttattcaaatttttttaaaaatattattat 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||
Sbjct: 112 ttttatttgtgacttactttattatctacagtactttaagcacaacttttcgttttttat 53
Query: 178 atttg 182
|||||
Sbjct: 52 atttg 48
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaa 95
|||||||||| |||||||||||||| |||||||||||
Sbjct: 2 tttttgcttgcaacgtttgaccacttgtcttattcaa 38
>RF01062;MIR812;AACV01011247.1/5926-6098 39947:Oryza sativa Japonica
Group
Length = 173
Score = 119 bits (60), Expect = 2e-26
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||||||||||||||||||| |||||||||||| || ||| ||||| |||
Sbjct: 173 gtttttgcttgtaacgtttgactactcgtcttatttaattttttaaaaaaatattattta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||| | | |||||||||| |||||||||||||| ||
Sbjct: 113 ttttatttgtgacttactttattatccacagtactttaagcgcaacttttcatttttgat 54
Query: 178 atttgcnnnnnnnntttgaataagactagtgatcaaacgtt 218
|||||| |||||||||||| |||| |||||||||
Sbjct: 53 atttgcaaaaaaattttgaataagacgagtggtcaaacgtt 13
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02027301.1/10059-10231 39946:Oryza sativa Indica
Group
Length = 173
Score = 119 bits (60), Expect = 2e-26
Identities = 107/125 (85%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
|||||||||| | |||| |||| |||||||||||||| | |||||||| ||||
Sbjct: 172 tttttgcttgcactgtttaaccattcgtcttattcaaaaaattttggaattattatttat 113
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||| ||||||||||||| ||||||||||||||| |||||||| |||||||||
Sbjct: 112 tttatttgtgatttactttattatccaaaatactttaagcacaacttttcgttttttata 53
Query: 179 tttgc 183
|||||
Sbjct: 52 tttgc 48
>RF01058;MIR806;AP005912.3/106817-106576 39947:Oryza sativa Japonica
Group
Length = 242
Score = 119 bits (60), Expect = 2e-26
Identities = 135/161 (83%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| |||||||||||||||||| ||||||| ||| | ||||||||||
Sbjct: 1 gtactccctccgtcccataatataagggattttgagtttttatttgcactgtttgaccac 60
Query: 83 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||| ||| ||| |||||| ||||||| | ||||||||||||||||||
Sbjct: 61 tcgtcttattaaaaaaatttggaa-ttattatttattttttgtgtgacttactttattat 119
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgc 183
||| || |||||||| |||||||| ||||||||||||||
Sbjct: 120 tcaaagtattttaagcacaacttttcgttttttatatttgc 160
Score = 58.0 bits (29), Expect = 7e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||| | |||||||||||||||||| ||||||| ||| | |||||||||||
Sbjct: 241 tactccctccattccataatataagggattttgagtttttatttgcattgtttgaccact 182
Query: 84 cgtcttatt 92
| |||||||
Sbjct: 181 catcttatt 173
>RF01058;MIR806;AACV01009412.1/1317-1556 39947:Oryza sativa Japonica
Group
Length = 240
Score = 119 bits (60), Expect = 2e-26
Identities = 194/243 (79%), Gaps = 3/243 (1%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| | |||||||||||||||| | ||||||||| | |||||||||
Sbjct: 1 gtactccctccgtcccctaatataagggattttgatattttgcttgcactgtttgaccat 60
Query: 83 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||||||| | || |||| || |||| ||||||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaattttggaaccattatttttttt---tgtgacttactttattat 117
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnntttgaataaga 202
| ||| | |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 118 ccaaagtgctttaagcataacttttcgttttttatatttgcacaaattttttgaataaga 177
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| |||| |||||| | || | |||| |||||||| ||||||||| |||||| |||| ||
Sbjct: 178 cgagtggtcaaacagtgcaagcaaaatatcaaaatcccttatattatgggacggaggaag 237
Query: 263 tag 265
|||
Sbjct: 238 tag 240
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||| ||||||| |||||||||||||||||| | ||||||||| | |||||||||||
Sbjct: 239 tacttcctccgtcccataatataagggattttgatattttgcttgcactgtttgaccact 180
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 179 cgtcttattcaaa 167
>RF01062;MIR812;AAAA02004566.1/9745-9575 39946:Oryza sativa Indica
Group
Length = 171
Score = 117 bits (59), Expect = 9e-26
Identities = 107/124 (86%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
||||||||| ||||||||||||||| |||||||||| ||||||||| |||||
Sbjct: 169 ttttgcttgcaacgtttgaccactcatcttattcaatattttta-aaattattatttatt 111
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
|||||||||| ||||||||||||| | | |||||||| ||||||||||||||||||||||
Sbjct: 110 ttatttgtgatttactttattatccatagtactttaaacataacttttcattttttatat 51
Query: 180 ttgc 183
||||
Sbjct: 50 ttgc 47
>RF01062;MIR812;AAAA02004559.1/13841-13672 39946:Oryza sativa Indica
Group
Length = 170
Score = 117 bits (59), Expect = 9e-26
Identities = 106/124 (85%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| ||| || |||||||||||||| ||||| ||| ||||||||| |||
Sbjct: 170 gtttttgtttgaaatgtttgaccactcgttttatttaaatttgtttaaaattattattta 111
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||
Sbjct: 110 ttttatttgtgacttactttattatctacagtactttaagcacaacttttcgttttttat 51
Query: 178 attt 181
||||
Sbjct: 50 attt 47
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaa 95
||||| ||| ||||||||||||||||||||||||||
Sbjct: 3 ttttgattgcaacgtttgaccactcgtcttattcaa 38
>RF01062;MIR812;AAAA02001658.1/683-852 39946:Oryza sativa Indica
Group
Length = 170
Score = 117 bits (59), Expect = 9e-26
Identities = 100/116 (86%)
Strand = Plus / Minus
Query: 66 ttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttattt 125
||||||| ||||| ||||||||||||||||| |||||||||| |||||||||||
Sbjct: 162 ttgtaacatttgatcactcgtcttattcaaaaaattttgaaattattatttattttattt 103
Query: 126 gtgacttactttattatctaaaatactttaagcataacttttcattttttatattt 181
|||||||| ||||||||||| | ||||||||||| ||||||| ||||||||||||
Sbjct: 102 gtgacttaatttattatctacattactttaagcacaactttttgttttttatattt 47
>RF01062;MIR812;AAAA02022102.1/84641-84470 39946:Oryza sativa Indica
Group
Length = 172
Score = 117 bits (59), Expect = 9e-26
Identities = 106/124 (85%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| ||| ||| ||||||||||| ||||||||||| |||||||||| |||
Sbjct: 172 gtttttgtttgcaacatttgaccactcatcttattcaaaaatttttgaaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||| ||||||||||| | || |||||||| |||||||| ||||||||
Sbjct: 112 ttttatttgtgacttaatttattatctatagtattttaagcacaacttttcgttttttat 53
Query: 178 attt 181
||||
Sbjct: 52 attt 49
Score = 61.9 bits (31), Expect = 5e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||||||||||||||||||| |||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccgctcgtcttatt 35
>RF01062;MIR812;AAAA02013562.1/28796-28969 39946:Oryza sativa Indica
Group
Length = 174
Score = 117 bits (59), Expect = 9e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 126 aaattattatttattttatttgtgacttcctttattatctaaagtactttaagcataact 67
Query: 165 tttcattttttatat 179
||| |||||||||||
Sbjct: 66 tttaattttttatat 52
>RF01062;MIR812;CR855044.1/89288-89120 4530:Oryza sativa (rice)
Length = 169
Score = 117 bits (59), Expect = 9e-26
Identities = 94/108 (87%)
Strand = Plus / Minus
Query: 74 tttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactta 133
|||||||| |||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 155 tttgaccattcgtcttattcaaaaaattttgaaattattatttattttatttgtgactta 96
Query: 134 ctttattatctaaaatactttaagcataacttttcattttttatattt 181
|||||||||| ||||||| ||||||| ||||||| ||||||||||||
Sbjct: 95 ctttattatccaaaatacattaagcacaactttttgttttttatattt 48
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 gtttgaccactcgtcttattcaaa 96
||||||||||||||||||||||||
Sbjct: 14 gtttgaccactcgtcttattcaaa 37
>RF01062;MIR812;AAAA02028052.1/20898-20729 39946:Oryza sativa Indica
Group
Length = 170
Score = 117 bits (59), Expect = 9e-26
Identities = 104/120 (86%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
|||| ||||||||||||||| |||||||||| ||||| |||||||||| |||||
Sbjct: 170 tttttcttgtaacgtttgac-actcgtcttaatcaaatttttttgaaattattatttatt 112
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
|||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 111 ttatttgtgacttactttattatctaccgtactttaagcacaacttttcgttttttatat 52
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 70 aacgtttgaccactcgtcttattcaaa 96
|||||||||||||||||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AP004727.2/137063-136892 39947:Oryza sativa Japonica
Group
Length = 172
Score = 117 bits (59), Expect = 9e-26
Identities = 99/115 (86%)
Strand = Plus / Minus
Query: 104 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 163
||||||||||||||||||||||||||||||||||||||| || | || |||||||| |||
Sbjct: 127 gaaattattaattattttatttgtgacttactttattatttacagtattttaagcacaac 68
Query: 164 ttttcattttttatatttgcnnnnnnnntttgaataagactagtgatcaaacgtt 218
|||| |||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 67 tttttgttttttatatttgcaaaaaaaatttgaataagacgagtgatcaaacgtt 13
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 aacgtttgaccactcgtcttattcaaa 96
||||||||| |||||||||||||||||
Sbjct: 13 aacgtttgatcactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02007308.1/8874-8706 39946:Oryza sativa Indica
Group
Length = 169
Score = 117 bits (59), Expect = 9e-26
Identities = 106/124 (85%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||| |||||| |||||||||||||||||||||||||| ||||||||| |||
Sbjct: 169 gtttgtgcttgcgacgtttgaccactcgtcttattcaaatttttttaaaattattattta 110
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||
Sbjct: 109 ttttatttgtgacttactttattatctatagtactttaagcacaactttttgttttttac 50
Query: 178 attt 181
||||
Sbjct: 49 attt 46
>RF01058;MIR806;AL772417.3/14129-13890 4530:Oryza sativa (rice)
Length = 240
Score = 117 bits (59), Expect = 9e-26
Identities = 134/161 (83%), Gaps = 4/161 (2%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| | || ||||||||||||| | ||||||||| | |||||||||
Sbjct: 1 gtactccctccgtcccctagtataagggattttgacattttgcttgcactgtttgaccat 60
Query: 83 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||||||| |||||||||| ||||||| || ||||||||||||||
Sbjct: 61 tcgtcttattcaaaaaattttgaaattattatttattttttt----acttactttattat 116
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgc 183
| ||| |||||||||||||||| ||||||||||||||||||
Sbjct: 117 ccaaagtactttaagcataactcttcattttttatatttgc 157
Score = 58.0 bits (29), Expect = 7e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| | |||||||||||||||| | ||||||| | | |||||||||||
Sbjct: 239 tactccctccgtcccttaatataagggattttgatattttgctcgcactgtttgaccact 180
Query: 84 cgtcttattcaaa 96
| |||||||||||
Sbjct: 179 catcttattcaaa 167
>RF01062;MIR812;AAAA02014896.1/1671-1842 39946:Oryza sativa Indica
Group
Length = 172
Score = 115 bits (58), Expect = 4e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| |||||||||||| |||||||||||||||| ||| |||||||||||||| ||
Sbjct: 124 aattattatttattttatttgcgacttactttattatccaaagtactttaagcataaatt 65
Query: 166 ttcattttttatatttgc 183
||||||||||||||||||
Sbjct: 64 ttcattttttatatttgc 47
>RF01062;MIR812;AACV01023991.1/981-810 39947:Oryza sativa Japonica
Group
Length = 172
Score = 115 bits (58), Expect = 4e-25
Identities = 109/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||||||| ||||||||||||||||||||||| ||||||||| |||
Sbjct: 172 gtttttgcttgtaacatttgaccactcgtcttattcaaaattttttaaaattattattta 113
Query: 118 ttttatttgtgactt-actttattatctaaaatactttaagcataacttttcatttttta 176
||||||||||||||| | ||||||||||| | || |||||||| ||||||| |||||| |
Sbjct: 112 ttttatttgtgactttaatttattatctacagtattttaagcacaactttttatttttaa 53
Query: 177 tatttgc 183
|||||||
Sbjct: 52 tatttgc 46
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
|||||||||| ||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttacaacgtttaaccactcgtcttattcaa 38
>RF01062;MIR812;AP003238.4/130582-130412 39947:Oryza sativa Japonica
Group
Length = 171
Score = 115 bits (58), Expect = 4e-25
Identities = 74/78 (94%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 123 aattattatttattttatttgtgacttactttattatctaaagtactttaagcacaactt 64
Query: 166 ttcattttttatatttgc 183
||| ||||||||||||||
Sbjct: 63 ttc-ttttttatatttgc 47
>RF01062;MIR812;AP008213.1/21799130-21798958 39947:Oryza sativa
Japonica Group
Length = 173
Score = 115 bits (58), Expect = 4e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||||||| ||||||||||||||||| ||||||||||||||| |||||
Sbjct: 125 aattattatttattttatttatgacttactttattatccaaaatactttaagcacaactt 66
Query: 166 ttcattttttatatttgc 183
|||||||||||| |||||
Sbjct: 65 ttcattttttatgtttgc 48
>RF01062;MIR812;AAAA02008793.1/16167-16338 39946:Oryza sativa Indica
Group
Length = 172
Score = 115 bits (58), Expect = 4e-25
Identities = 96/111 (86%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
|||||| ||||||||||||||||| | |||||||| ||||||| |||||||||
Sbjct: 157 gtttgatcactcgtcttattcaaaaaaacttggaattattatttatttttattgtgactt 98
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgc 183
||||||||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct: 97 actttattatccaaagtactttaagcacaacttttcattttttatatttgc 47
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||| ||||| ||||||||||||||||||||||||
Sbjct: 1 gtttttgtttgtattgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AC137744.2/2192-2020 39947:Oryza sativa Japonica
Group
Length = 173
Score = 115 bits (58), Expect = 4e-25
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||| | |||||||| |||||||||||||||||||||||||| |||||
Sbjct: 125 aattattatttattttttctgtgacttgctttattatctaaaatactttaagcacaactt 66
Query: 166 ttcattttttatatttgcnnnnnnnntttgaataagactagtgatcaaac 215
||| |||||||||||||| |||||||||||| |||||||||||
Sbjct: 65 ttcgttttttatatttgcacaaattttttgaataagacgagtgatcaaac 16
Score = 46.1 bits (23), Expect = 3e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| | |||||| |||||||||||||||||
Sbjct: 1 gtttttgcttgcactgtttgatcactcgtcttattcaaa 39
>RF01062;MIR812;AACV01018648.1/1053-1225 39947:Oryza sativa Japonica
Group
Length = 173
Score = 115 bits (58), Expect = 4e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
|||||||||||||||||||||||| | |||||||| ||||||| ||||||||||
Sbjct: 158 gtttgaccactcgtcttattcaaaaaagtatggaattattatttatttt-tttgtgactt 100
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgc 183
||||||||||| ||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 99 actttattatccaaagtactttaagcacaacttgtcattttttatatttgc 49
Score = 46.1 bits (23), Expect = 3e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| | | ||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcactggttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01025949.1/8418-8245 39947:Oryza sativa Japonica
Group
Length = 174
Score = 115 bits (58), Expect = 4e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 104 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 163
|||||||||| |||||||||||||||||||||||||||| || | ||||||||||| |||
Sbjct: 127 gaaattattatttattttatttgtgacttactttattatatacagtactttaagcacaac 68
Query: 164 ttttcattttttatattt 181
||||||||||||||||||
Sbjct: 67 ttttcattttttatattt 50
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 gtttgaccactcgtcttattcaaa 96
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattcaaa 39
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 115 bits (58), Expect = 4e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
|||||||||||||||||||||||| | |||||||| ||||||| ||||||||||
Sbjct: 43 gtttgaccactcgtcttattcaaaaaagtatggaattattatttatttt-tttgtgactt 101
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgc 183
||||||||||||||| ||||||||||| ||||| || ||||||||||||||
Sbjct: 102 actttattatctaaagtactttaagcacaacttgtcgttttttatatttgc 152
Score = 81.8 bits (41), Expect = 5e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||| ||||||| |||||||||||| | | |||||||||
Sbjct: 234 tactccctccgtcccataatataacggattttgagtttttgcttgcactggttgaccact 175
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 174 cgtcttattcaaa 162
>RF01062;MIR812;AP003347.3/33179-33351 39947:Oryza sativa Japonica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct: 125 aaattattatttaatttatttgtgacttactttattatctatagtactttaagcacaact 66
Query: 165 tttcattttttatattt 181
|||||||||||||||||
Sbjct: 65 tttcattttttatattt 49
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||| ||| |||||||||||||||||||||||
Sbjct: 1 gtttttgattgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02017490.1/3538-3366 39946:Oryza sativa Indica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 102/118 (86%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||||| |||||||||||||||||||||||| | |||||||| |||
Sbjct: 173 gtttttgcttgtattgtttgaccactcgtcttattcaaaaatttttggaattattattta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttt 175
|||| ||| ||||||||||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 113 tttt-tttatgacttactttattatccaaaatactttaagcataatttttcttttttt 57
>RF01062;MIR812;AP005698.3/85213-85385 39947:Oryza sativa Japonica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 99/114 (86%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtga 129
||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 161 aacgtttgaccactcgtcttattcaaaaaattttagaattattatttattttatttgtga 102
Query: 130 cttactttattatctaaaatactttaagcataacttttcattttttatatttgc 183
|||||||||||||| | | ||||||||||| |||||||||| ||||||||||||
Sbjct: 101 cttactttattatccacagtactttaagcacaacttttcat-ttttatatttgc 49
>RF01062;MIR812;AP004330.3/32219-32048 39947:Oryza sativa Japonica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
|||||||||||||||||||| ||| |||||||||||||||||||||||||| ||
Sbjct: 157 gtttgaccactcgtcttatttaaatttttttgaaattattaattattttatttgtgattt 98
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttg 182
| ||||||||||| | || ||||||||||||||||| ||||||||||||
Sbjct: 97 aatttattatctacagtattttaagcataacttttcggtttttatatttg 48
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 70 aacgtttgaccactcgtcttattcaa 95
||||||||||||||||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttattcaa 38
>RF01062;MIR812;AACV01022178.1/41655-41482 39947:Oryza sativa
Japonica Group
Length = 174
Score = 113 bits (57), Expect = 1e-24
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||| ||| |||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 126 aaatttttatttattttatttgtggcttactttattatccaaaatactttaagcataact 67
Query: 165 tttcattttttatattt 181
|||| ||||||||||||
Sbjct: 66 tttcgttttttatattt 50
>RF01062;MIR812;AAAA02021186.1/45161-45331 39946:Oryza sativa Indica
Group
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 108/126 (85%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||||||||||||| || ||||||||||||||||| ||||||||| |||
Sbjct: 171 gtttttgcttgtaacgcttaaccactcgtcttattcatttttttaa-aaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||||||||||||||||||||| || | ||||||||||| |||||||| ||||||||
Sbjct: 112 ttttatttgtgacttactttattatttacagtactttaagcacaacttttcgttttttat 53
Query: 178 atttgc 183
||||||
Sbjct: 52 atttgc 47
>RF01062;MIR812;AAAA02029081.1/4555-4382 39946:Oryza sativa Indica
Group
Length = 174
Score = 113 bits (57), Expect = 1e-24
Identities = 107/126 (84%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| || |||||||||||||||||||||||| |||| |||||||||
Sbjct: 174 gtttttgcttgcaatgtttgaccactcgtcttattcaaatttttttgaaactattaatta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||| ||||||||||||||||||| | ||||||||| | || |||| |||| |||
Sbjct: 114 ttttatttttgacttactttattatctacagtactttaagtacaaatttttgttttgtat 55
Query: 178 atttgc 183
||||||
Sbjct: 54 atttgc 49
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
|||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02010366.1/9316-9488 39946:Oryza sativa Indica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||||||||
Sbjct: 126 aaattattatttattttatttgtgacttactttattacccaaagtactttaagcataact 67
Query: 165 tttcattttttatattt 181
|||| ||||||||||||
Sbjct: 66 tttcgttttttatattt 50
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||| | |||||||||||| ||||||||||||
Sbjct: 3 ttttgcttgcaccgtttgaccacttgtcttattcaaa 39
>RF01062;MIR812;AC144558.1/139667-139494 39947:Oryza sativa Japonica
Group
Length = 174
Score = 113 bits (57), Expect = 1e-24
Identities = 98/114 (85%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtga 129
||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 162 aacgtttgatcactcgtcttattcaatattttctgaaattattaattattttatttgtga 103
Query: 130 cttactttattatctaaaatactttaagcataacttttcattttttatatttgc 183
|||||||||||||||| | | |||||| || |||||||| ||||||| ||||||
Sbjct: 102 cttactttattatctacagttctttaaacacaacttttcgttttttagatttgc 49
Score = 61.9 bits (31), Expect = 5e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
|||||||||||||||||||| ||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttggccactcgtcttatt 35
>RF01058;MIR806;AAAA02000336.1/19576-19334 39946:Oryza sativa Indica
Group
Length = 243
Score = 113 bits (57), Expect = 1e-24
Identities = 136/162 (83%), Gaps = 2/162 (1%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
|||||||||| || | |||||||||||||||| | ||||||||| | |||||||||
Sbjct: 1 gtactccctctgttccctaatataagggattttgacattttgcttgcactgtttgaccat 60
Query: 83 tcgtcttattcaaannnnnnnga-aattattaattattttatttgtgacttactttatta 141
|||||||||||||| | |||||||| |||||||||||||||||| ||||||||
Sbjct: 61 tcgtcttattcaaaaaaaatttagaattattatttattttatttgtgactt-ctttatta 119
Query: 142 tctaaaatactttaagcataacttttcattttttatatttgc 183
|| ||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 120 tccaaagtactttaagcacaacttttcgttttttatatttgc 161
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 40 taatataagggattttaagtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||||||||||||| | |||| |||| | | ||||||||||||||||||||||
Sbjct: 226 taatataagggattttgacattttccttgcactgattgaccactcgtcttattcaaa 170
>RF01058;MIR806;AC129719.2/23163-23401 39947:Oryza sativa Japonica
Group
Length = 239
Score = 113 bits (57), Expect = 1e-24
Identities = 135/161 (83%), Gaps = 5/161 (3%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||| | |||||||||||||||||| |||||||| ||||| |||||| |||
Sbjct: 1 gtactccctccatcccataatataagggattttgagtttttgtttgtactgtttgatcac 60
Query: 83 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||| ||| | |||||||| ||||||| || |||||||||||||||
Sbjct: 61 tcgtcttattaaaaatatt--ggaattattatttattttttt---gacttactttattat 115
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgc 183
| ||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 116 ccaaagtactttaagcacaacttttcgttttttatatttgc 156
Score = 81.8 bits (41), Expect = 5e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||| ||||||| |||||||||||| | |||||||||||
Sbjct: 238 tactccctccgtcccataatataaaggattttgagtttttgcttgcactgtttgaccact 179
Query: 84 cgtcttattcaaa 96
||| |||||||||
Sbjct: 178 cgttttattcaaa 166
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 196 aataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggaca 255
|||||||| ||||||||||| |||| ||||| ||||||| ||||||||| |||||
Sbjct: 70 aataagacgagtgatcaaacagtacaaacaaaaactcaaaatcccttatattatgggatg 11
Query: 256 gagggagta 264
|||||||||
Sbjct: 10 gagggagta 2
>RF01062;MIR812;AAAA02009328.1/252-82 39946:Oryza sativa Indica
Group
Length = 171
Score = 111 bits (56), Expect = 6e-24
Identities = 109/126 (86%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||||| |||||||||||| ||||||||||| |||||||||| |||
Sbjct: 171 gtttttgcttgtactgtttgaccactcttcttattcaaaaatttt-gaaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||| |||| ||||||||||||||||| ||| |||||||||||||| ||||| ||||||||
Sbjct: 112 ttt-atttttgacttactttattatccaaattactttaagcataatttttctttttttat 54
Query: 178 atttgc 183
||||||
Sbjct: 53 atttgc 48
>RF01062;MIR812;AAAA02027427.1/13502-13329 39946:Oryza sativa Indica
Group
Length = 174
Score = 111 bits (56), Expect = 6e-24
Identities = 135/165 (81%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| || |||||||||||||||| |||||| ||||||||| |||
Sbjct: 174 gtttttgcttggaatgtttgaccactcgtctcattcaattttttaaaaaattattattta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcatttt-tta 176
|||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |
Sbjct: 114 ttttatttgtgacttactttattatctaccgtactttaagcataacttttcgttttctaa 55
Query: 177 tatttgcnnnnnnnntttgaataagactagtgatcaaacgttaca 221
||||||| ||| |||||||| |||| ||||||||||||
Sbjct: 54 tatttgcaaaaaaaatttaaataagacgagtggtcaaacgttaca 10
Score = 61.9 bits (31), Expect = 5e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01013528.1/595-423 39947:Oryza sativa Japonica
Group
Length = 173
Score = 111 bits (56), Expect = 6e-24
Identities = 122/149 (81%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtga 129
||||||||||||||||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 161 aacgtttgaccactcgtcttattaaaatttttttaaaattattatttattttatttgtga 102
Query: 130 cttactttattatctaaaatactttaagcataacttttcattttttatatttgcnnnnnn 189
|||||||||||||| | |||||||| || |||||||| ||||||||||||||
Sbjct: 101 cttactttattatccacggtactttaaacacaacttttcgttttttatatttgcaaaaaa 42
Query: 190 nntttgaataagactagtgatcaaacgtt 218
|||||||||||| |||| |||||||||
Sbjct: 41 aatttgaataagacgagtggtcaaacgtt 13
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02015781.1/367-537 39946:Oryza sativa Indica
Group
Length = 171
Score = 111 bits (56), Expect = 6e-24
Identities = 107/125 (85%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
|||||| ||| ||| ||||||||||||||||||||||| |||||||||| ||||
Sbjct: 170 tttttgtttgcaacatttgaccactcgtcttattcaaaaaattttgaaattattatttat 111
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||||||||||||||||||| || |||||||| || ||||| |||||||||
Sbjct: 110 tttatttgtgacttactttattatctaccgtattttaagcacaa-ttttcgttttttata 52
Query: 179 tttgc 183
|||||
Sbjct: 51 tttgc 47
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 aacgtttgaccactcgtcttattcaaa 96
||||||| |||||||||||||||||||
Sbjct: 13 aacgtttaaccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01002654.1/12821-12650 39947:Oryza sativa
Japonica Group
Length = 172
Score = 111 bits (56), Expect = 6e-24
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| |||| ||| ||||||||||||||||||||||| ||||||||| |||
Sbjct: 172 gttttttcttgcaacatttgaccactcgtcttattcaaaaaaaatttaaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||||||||||||| | | |||||||| |||||||| ||||||||
Sbjct: 112 ttttatttgtgacttactttattatctacagtgttttaagcacaacttttcgttttttat 53
Query: 178 atttg 182
||||
Sbjct: 52 ttttg 48
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||| || |||||||||||||||||| |||||
Sbjct: 1 gtttttgtttataacgtttgaccactcgttttatt 35
>RF01062;MIR812;AAAA02000177.1/14304-14475 39946:Oryza sativa Indica
Group
Length = 172
Score = 111 bits (56), Expect = 6e-24
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtga 129
|||||||||||||| |||||||| ||| |||||||||||||||||||||| ||
Sbjct: 160 aacgtttgaccacttgtcttatttaaaattttttgaaattattaattattttatttatgg 101
Query: 130 cttactttattatctaaaatactttaagcataacttttcattttttatatttg 182
|||||||||||||||| | || |||||||| |||||||| |||||||||||||
Sbjct: 100 cttactttattatctacagtattttaagcacaacttttcgttttttatatttg 48
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
|||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttctaacgtttgaccactcgtcttattcaa 38
>RF01062;MIR812;AP005807.3/11576-11404 39947:Oryza sativa Japonica
Group
Length = 173
Score = 111 bits (56), Expect = 6e-24
Identities = 122/149 (81%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtga 129
||||||||||||||||||||||| ||| ||||||||| ||||||||||| |||
Sbjct: 161 aacgtttgaccactcgtcttatttaaatttttttaaaattattatttattttatttatga 102
Query: 130 cttactttattatctaaaatactttaagcataacttttcattttttatatttgcnnnnnn 189
||||||||||||||| | || ||||||||||||||||| |||| |||||||||
Sbjct: 101 tttactttattatctacagtattttaagcataacttttcgttttatatatttgcaaaaag 42
Query: 190 nntttgaataagactagtgatcaaacgtt 218
|||||||||||| |||| |||||||||
Sbjct: 41 aatttgaataagacgagtggtcaaacgtt 13
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||| ||||| |||||||||||||||||||||||||||
Sbjct: 1 gttttcgcttgaaacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01005559.1/51073-50902 39947:Oryza sativa
Japonica Group
Length = 172
Score = 111 bits (56), Expect = 6e-24
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtga 129
||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||
Sbjct: 160 aacgtttgaccactcatcttatttaaaattttttgaaattattatttattttatttgtga 101
Query: 130 cttactttattatctaaaatactttaagcataacttttcattttttatatttg 182
|||||||||||||||| ||||||||||||||||||| ||||||| |||||
Sbjct: 100 cttactttattatctacggtactttaagcataactttttgttttttacatttg 48
Score = 46.1 bits (23), Expect = 3e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||| || ||||||||| || ||||||||||||||||
Sbjct: 1 gtttttactggtaacgtttaactactcgtcttattcaaa 39
>RF01058;MIR806;AAAA02000839.1/35471-35708 39946:Oryza sativa Indica
Group
Length = 238
Score = 111 bits (56), Expect = 6e-24
Identities = 135/161 (83%), Gaps = 7/161 (4%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||| | ||| | |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttgagtttt-gattgcactgtttgaccact 60
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgt-gacttactttattat 142
||||||||||||| ||| ||||||||| |||| | |||||||||||||||
Sbjct: 61 cgtcttattcaaaaaagttagaa-----taattatttaattttttgacttactttattat 115
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgc 183
||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 116 ctaaagtactttaagcacaacttttcgttttttatatttgc 156
Score = 58.0 bits (29), Expect = 7e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||| |||||||||| |||||| | ||| | |||||||||||
Sbjct: 237 tactccctccgtcctataatacaagggattttgagttttagtttgcattgtttgaccact 178
Query: 84 cgtcttattcaaa 96
| |||||||||||
Sbjct: 177 catcttattcaaa 165
>RF01062;MIR812;AAAA02032712.1/11653-11824 39946:Oryza sativa Indica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||||||||||||||||||||||||||||||||||| | |||||||| || ||||
Sbjct: 125 aaattattaattattttatttgtgacttactttattatctacagtactttaaacacaact 66
Query: 165 tttcattttttatatttgc 183
||| |||||||| ||||||
Sbjct: 65 ttttattttttagatttgc 47
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
|||||||||| ||||||||| ||||||||||||||
Sbjct: 1 gtttttgcttataacgtttggccactcgtcttatt 35
>RF01062;MIR812;AACV01020435.1/10345-10175 39947:Oryza sativa
Japonica Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 96/111 (86%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
||||||||| |||||||||||||| | |||||||| ||||||| |||| | ||
Sbjct: 156 gtttgaccattcgtcttattcaaaaaatttaggaattattatttattttttttg--attt 99
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgc 183
|||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 98 actttattatctaaaatactttaagcataacttttcgttttttatatttgc 48
>RF01062;MIR812;AP003871.3/81937-82107 39947:Oryza sativa Japonica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 74/79 (93%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 104 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 163
|||||||||| ||||||||||||||||||||||||||||||| | ||||||||| | |||
Sbjct: 126 gaaattattatttattttatttgtgacttactttattatctacagtactttaag-acaac 68
Query: 164 ttttcattttttatatttg 182
|||||||||||||||||||
Sbjct: 67 ttttcattttttatatttg 49
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||||||| ||| |||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacatttgaccactcgtcttatt 35
>RF01062;MIR812;AC135431.2/24077-24247 39947:Oryza sativa Japonica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
||||||||||| ||||||||| |||||||||||||| |||||||||| |||||
Sbjct: 169 ttttgcttgtactgtttgaccattcgtcttattcaaaaaaatttgaaattattatttatt 110
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
|||||||||||||||||||| | | ||| ||||||||||| |||||| ||||||||||
Sbjct: 109 ttatttgtgacttactttataacccaaagtactttaagcacaactttctgttttttatat 50
Query: 180 ttgc 183
||||
Sbjct: 49 ttgc 46
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||| | ||||||||||||||||||||||||
Sbjct: 3 ttttgcttgcactgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AP004262.2/8297-8125 39947:Oryza sativa Japonica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 133/164 (81%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| |||| ||| ||| ||||||||||||||||||| |||| ||||| |||
Sbjct: 173 gtttttacttgcaacattttaccactcgtcttattcaaatttttttgaaactattattta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||||||||||||| |||||||||||||| | ||||||||||| || ||||| |||||||
Sbjct: 113 ttttatttgtgacatactttattatctacagtactttaagcacaaattttcggtttttat 54
Query: 178 atttgcnnnnnnnntttgaataagactagtgatcaaacgttaca 221
|||||| ||||||||||| |||| ||||||||||||
Sbjct: 53 atttgcaaaaaaaaattgaataagacgagtggtcaaacgttaca 10
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaa 95
|||| ||||||||||||||||||||||||||||||||
Sbjct: 2 ttttcgcttgtaacgtttgaccactcgtcttattcaa 38
>RF01062;MIR812;AC025905.3/49075-49245 4530:Oryza sativa (rice)
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 74 tttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactta 133
||||||||||||||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 155 tttgaccactcgtcttatttaaatttttttgaaattattatttattttatttgtgactta 96
Query: 134 ctttattatctaaaatactttaagcataacttttcattttttatattt 181
|||||||||||| | || |||||||| ||||||| |||||| ||||||
Sbjct: 95 ctttattatctacagtattttaagcacaactttttatttttaatattt 48
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
||||||| |||||||||||||||| |||| ||||||||
Sbjct: 1 gtttttgtttgtaacgtttgaccattcgtgttattcaa 38
>RF01062;MIR812;AP008215.1/17764414-17764585 39947:Oryza sativa
Japonica Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 126 aaattattatttattttatttgtgacttactttattatacaaagtactttaagcataact 67
Query: 165 tttcattttttatatttgc 183
|||| || |||||||||||
Sbjct: 66 tttcgttgtttatatttgc 48
>RF01062;MIR812;AP008217.1/8072956-8072786 39947:Oryza sativa
Japonica Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 96/111 (86%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
|||||||||||||||||||| ||| |||||||||| ||||||| |||| ||||
Sbjct: 156 gtttgaccactcgtcttatttaaaaaaatttgaaattattatttattttttttg--actt 99
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgc 183
||||||||||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 98 actttattatccaaagtactttaagcataacttttcgttttttatatttgc 48
>RF01062;MIR812;AAAA02018397.1/69188-69020 39946:Oryza sativa Indica
Group
Length = 169
Score = 107 bits (54), Expect = 9e-23
Identities = 106/125 (84%), Gaps = 3/125 (2%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| |||| ||||||||||||||||||||||| ||| ||||||||| |||
Sbjct: 169 gtttttacttgcaacgtttgaccactcgtcttatttaaaaaattttaaaattattattta 110
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||||| ||||||| | || ||||||||||| ||||||||||||||
Sbjct: 109 ttttatttgtgacttact---ttatctacagtattttaagcataatttttcattttttat 53
Query: 178 atttg 182
|||||
Sbjct: 52 atttg 48
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 70 aacgtttgaccactcgtcttattcaa 95
||||||||||||||||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttattcaa 38
>RF01062;MIR812;AAAA02000325.1/25603-25434 39946:Oryza sativa Indica
Group
Length = 170
Score = 107 bits (54), Expect = 9e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 126 aaattattatttattttatttgtgactgtctttattatctaaagtactttaagcataact 67
Query: 165 tttcattttttatatttg 182
||| |||||||||||||
Sbjct: 66 ttttgttttttatatttg 49
>RF01062;MIR812;AAAA02031835.1/1391-1563 39946:Oryza sativa Indica
Group
Length = 173
Score = 107 bits (54), Expect = 9e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| |||||||||||||||||||||||||||| ||| ||||||||||| |||||
Sbjct: 124 aattattatttattttatttgtgacttactttattatacaaagtactttaagcacaactt 65
Query: 166 ttcattttttatatttgc 183
||| ||||||||||||||
Sbjct: 64 ttcgttttttatatttgc 47
>RF01062;MIR812;AAAA02016979.1/20786-20614 39946:Oryza sativa Indica
Group
Length = 173
Score = 107 bits (54), Expect = 9e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||||||||||||||||||||||||||||| ||||| ||| | |||||
Sbjct: 125 aattattatttattttatttgtgacttactttattatctaaagtacttaaagtacaactt 66
Query: 166 ttcattttttatatttgc 183
|| |||||||||||||||
Sbjct: 65 tttattttttatatttgc 48
>RF01062;MIR812;AAAA02010127.1/41698-41525 39946:Oryza sativa Indica
Group
Length = 174
Score = 107 bits (54), Expect = 9e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||| ||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 125 aattattatttattttctttgtgacttactttattatccaatgtactttaagcataattt 66
Query: 166 ttcattttttatatttgc 183
||||||||||||||||||
Sbjct: 65 ttcattttttatatttgc 48
>RF01062;MIR812;AAAA02011349.1/24079-23906 39946:Oryza sativa Indica
Group
Length = 174
Score = 107 bits (54), Expect = 9e-23
Identities = 107/126 (84%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnn--gaaattattaat 115
|||||||||||||| || ||||||||| ||||||||||| |||||||||| |
Sbjct: 174 gtttttgcttgtaatgtctgaccactcatcttattcaaatttttttttgaaattattatt 115
Query: 116 tattttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttt 175
|||||||||||||||||||||||||||||| | |||||||| | |||||||| ||||||
Sbjct: 114 tattttatttgtgacttactttattatctacagtactttaaacgcaacttttcgtttttt 55
Query: 176 atattt 181
||||||
Sbjct: 54 atattt 49
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
|||||||||||||||||||||||| |||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccattcgtcttattcaa 38
>RF01062;MIR812;AAAA02034457.1/5030-5202 39946:Oryza sativa Indica
Group
Length = 173
Score = 107 bits (54), Expect = 9e-23
Identities = 104/123 (84%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
||||||||||| ||||||||| | |||||||||||| |||||||| |||||
Sbjct: 171 ttttgcttgtactgtttgaccatttgtcttattcaaaaaattttataattattatttatt 112
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
|||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||
Sbjct: 111 ttatttgtgacttactttattatccacggtactttaagcataacttttcgttttttatat 52
Query: 180 ttg 182
|||
Sbjct: 51 ttg 49
>RF01062;MIR812;AP003616.4/66392-66223 39947:Oryza sativa Japonica
Group
Length = 170
Score = 107 bits (54), Expect = 9e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||||||||||||||||||||||||||||| |||| |||||| |||||
Sbjct: 124 aattattatttattttatttgtgacttactttattatctaaagtactctaagcacaactt 65
Query: 166 ttcattttttatatttgc 183
||||| ||||||||||||
Sbjct: 64 ttcat-ttttatatttgc 48
>RF01062;MIR812;AAAA02033452.1/2719-2889 39946:Oryza sativa Indica
Group
Length = 171
Score = 107 bits (54), Expect = 9e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 125 aaattattatttattttatttgtgacttactttattatccaaagtactttaagcacaact 66
Query: 165 tttcattttttatatttg 182
||| |||||||||||||
Sbjct: 65 ttttgttttttatatttg 48
>RF01062;MIR812;AAAA02020988.1/38602-38431 39946:Oryza sativa Indica
Group
Length = 172
Score = 107 bits (54), Expect = 9e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||||||||||| ||||||||||||||||| |||||||| || |||||
Sbjct: 124 aattattatttattttatttgtgatttactttattatctaaagtactttaaacacaactt 65
Query: 166 ttcattttttatatttgc 183
||| ||||||||||||||
Sbjct: 64 ttcgttttttatatttgc 47
>RF01062;MIR812;AACV01022000.1/32466-32294 39947:Oryza sativa
Japonica Group
Length = 173
Score = 107 bits (54), Expect = 9e-23
Identities = 117/143 (81%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
||||||||| |||||||||||||| | |||||||| ||||||||||| ||||||
Sbjct: 158 gtttgaccattcgtcttattcaaaaatttttggaattattatttattttatttatgactt 99
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgcnnnnnnnnt 192
||||||||||| ||| ||||||||||| || |||| | ||||||||||||| |
Sbjct: 98 actttattatccaaagtactttaagcacaaatttttactttttatatttgcacaaatttt 39
Query: 193 ttgaataagactagtgatcaaac 215
||||||||||| |||||||||||
Sbjct: 38 ttgaataagacgagtgatcaaac 16
>RF01062;MIR812;AC145127.1/200726-200898 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 9e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 125 aattattatttatttt-tttgtgacttactttattatctaaagtactttaagcacaactt 67
Query: 166 ttcattttttatatttgc 183
||| ||||||||||||||
Sbjct: 66 ttcgttttttatatttgc 49
Score = 46.1 bits (23), Expect = 3e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
|||||| |||||| ||||||| ||||||||||||||||
Sbjct: 1 gtttttacttgtattgtttgactactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02021416.1/40369-40537 39946:Oryza sativa Indica
Group
Length = 169
Score = 105 bits (53), Expect = 3e-22
Identities = 99/114 (86%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtga 129
||||||||||||||||||||||||||| ||||| |||| |||||||||||||||
Sbjct: 157 aacgtttgaccactcgtcttattcaaatttttttgaaatgattatttattttatttgtga 98
Query: 130 cttactttattatctaaaatactttaagcataacttttcattttttatatttgc 183
||||||||| |||||| | ||||||||||| |||||||| |||||||||||||
Sbjct: 97 cttacttta-tatctacagtactttaagcacaacttttc-gtttttatatttgc 46
>RF01062;MIR812;AAAA02033648.1/11539-11708 39946:Oryza sativa Indica
Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 105/124 (84%), Gaps = 3/124 (2%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| ||| | ||||||||||||||||||||| ||| |||||||||| |||
Sbjct: 170 gtttttgtttgcaccgtttgaccactcgtcttatttaaaaaattttgaaattattattta 111
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||| || |||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 110 ttttttt---gacttactttattatctaaagtactttaagcacaatttttcattttttat 54
Query: 178 attt 181
||||
Sbjct: 53 attt 50
>RF01062;MIR812;AAAA02002551.1/6491-6321 39946:Oryza sativa Indica
Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||||||||
Sbjct: 125 aaattattatttattttatttgtgacttaatttattatctacagtactttaagcataact 66
Query: 165 tttcattttttatattt 181
||| | |||||||||||
Sbjct: 65 ttttaatttttatattt 49
>RF01062;MIR812;AAAA02010936.1/30282-30112 39946:Oryza sativa Indica
Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 97/114 (85%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtga 129
|||||||||| |||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 159 aacgtttgactactcgtcttattcaaatgtttttaaaattattatttattttatttgtga 100
Query: 130 cttactttattatctaaaatactttaagcataacttttcattttttatatttgc 183
|||||||||||||| | | || ||||||| ||||||| |||||||||||||||
Sbjct: 99 cttactttattatccacagtattttaagcgcaactttttattttttatatttgc 46
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttatt 92
|||| ||||||||||||||| ||||||||||||
Sbjct: 3 tttttcttgtaacgtttgactactcgtcttatt 35
>RF01062;MIR812;AAAA02027640.1/6344-6172 39946:Oryza sativa Indica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| ||||||||||||||||||||||||||||||| | || ||||| ||||||
Sbjct: 126 aaattattatttattttatttgtgacttactttattatctacagtattttaaatataact 67
Query: 165 tttcattttttatatttgcnnnnnnnntttgaataagactagtgatcaaacgttaca 221
||| |||||||||||||| |||||||||||| |||| ||||||||||||
Sbjct: 66 ttttattttttatatttgtaaaagaaatttgaataagacgagtggtcaaacgttaca 10
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgtttgtaacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AC121365.2/113520-113348 39947:Oryza sativa Japonica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 108/126 (85%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgt-ttgaccactcgtcttattcaaannnnnnngaaattattaatt 116
||||||||||||||||| || |||||||||||||||||| |||||||||| ||
Sbjct: 173 gtttttgcttgtaacgtcttaaccactcgtcttattcaattttttttgaaattatta-tt 115
Query: 117 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 176
||||| |||| |||||||||||||||||| | |||||| |||| |||||||| |||||||
Sbjct: 114 attttgtttgagacttactttattatctacagtactttgagcacaacttttcgtttttta 55
Query: 177 tatttg 182
||||||
Sbjct: 54 tatttg 49
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| || ||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaatgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AP003704.3/7695-7526 39947:Oryza sativa Japonica
Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 108/126 (85%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| | ||||||||||||||||||||||| | | |||||||| |||
Sbjct: 170 gtttttgcttgcaccgtttgaccactcgtcttattcagaaaattttggaattattattta 111
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||| ||||||||||||||||||||| ||| |||||||||| |||||||| |||||||||
Sbjct: 110 cttt-tttgtgacttactttattatc-aaagtactttaagcgtaactttttattttttat 53
Query: 178 atttgc 183
||||||
Sbjct: 52 atttgc 47
>RF01062;MIR812;AAAA02000165.1/13009-12838 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 107/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||||||| | ||||||||||||||| ||||| ||| | |||||||| |||
Sbjct: 172 gtttttgcttacaccgtttgaccactcgttttattaaaaaaaatttggaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 112 cttt-tttgtgacttactttattatctaaaatactttaagcgcaacttttcgttttttat 54
Query: 178 atttgc 183
||||||
Sbjct: 53 atttgc 48
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 74 tttgaccactcgtcttattcaaa 96
|||||||||||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01006015.1/16796-16959 39947:Oryza sativa
Japonica Group
Length = 164
Score = 105 bits (53), Expect = 3e-22
Identities = 100/118 (84%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||||||||||||||||||||| ||||||||| ||||||||| |||
Sbjct: 164 gtttttgcttgtaacgtttgaccactcgtattattcaaatttttttaaaattattattta 105
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttt 175
|||||||||||||||| ||||||||||| | || |||||| | || ||||| ||||||
Sbjct: 104 ttttatttgtgacttaatttattatctatattattttaagtacaatttttcttttttt 47
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||| ||| |||||||||||||||||||||||||||
Sbjct: 1 gtttttgtttggaacgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AL606621.3/36682-36853 39947:Oryza sativa Japonica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 74 tttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactta 133
||||||||||||||||||||||| | ||||||| ||||||||||||||||||
Sbjct: 156 tttgaccactcgtcttattcaaaattttttaagattattatttattttatttgtgacttc 97
Query: 134 ctttattatctaaaatactttaagcataacttttcattttttatatttgc 183
|||||||||||| | | |||||| ||||||||||| ||||||||||||||
Sbjct: 96 ctttattatctatatttctttaaacataacttttcgttttttatatttgc 47
>RF01062;MIR812;AAAA02016451.1/15963-15791 39946:Oryza sativa Indica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 103/122 (84%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
|||| |||||| |||||||||||| ||||||||||| |||||||| |||||
Sbjct: 171 ttttacttgtactgtttgaccactcatcttattcaaaaatttttagaattattatttatt 112
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||
Sbjct: 111 ttatttgtgacttactttattattcaaagtactttaagcacaacttttcgttttttatat 52
Query: 180 tt 181
||
Sbjct: 51 tt 50
>RF01062;MIR812;AACV01011974.1/20216-20385 39947:Oryza sativa
Japonica Group
Length = 170
Score = 105 bits (53), Expect = 3e-22
Identities = 108/126 (85%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| | |||||||||||||||||||||||| ||| |||||| |||
Sbjct: 170 gtttttgcttgcacggtttgaccactcgtcttattcaaaaattttggaa-ttattattta 112
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
||| ||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||
Sbjct: 111 cttt-tttgtgacttactttattatccaaaatactttacgcacaacttttcgttttttat 53
Query: 178 atttgc 183
||||||
Sbjct: 52 atttgc 47
>RF01058;MIR806;AAAA02032415.1/3027-2786 39946:Oryza sativa Indica
Group
Length = 242
Score = 105 bits (53), Expect = 3e-22
Identities = 180/226 (79%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 40 taatataagggattttaagtttttgcttgtaacgtttgaccactcgtcttattcaaannn 99
|||||||||||||||| | |||||||| | ||||||| |||||||||||||||
Sbjct: 18 taatataagggattttgatattttgcttacactatttgaccgctcgtcttattcaaaaaa 77
Query: 100 nnnngaaattattaattattttatttgtgacttactttattatctaaaatactttaagca 159
|||||||| ||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 78 ttttagaattattatttattttatttgtgacttactttattatccaaagtactttaagct 137
Query: 160 taacttttcattttttatatttgcnnnnnnnntttgaataagactagtgatcaaacgtta 219
|||||||| ||||| |||||||| ||| |||||||| |||| |||||| |
Sbjct: 138 caacttttcgtttttgatatttgcacatatttttt-aataagacgagtggtcaaacagtg 196
Query: 220 catgtaaaaaatcaaaataccttatattgtgggacagagggagtag 265
|| |||||| |||||||| |||||||| ||||| ||||||||||
Sbjct: 197 caagtaaaatatcaaaatctcttatattaggggacggagggagtag 242
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| | ||||||||| |||||| | |||| |||| | |||||||||||
Sbjct: 241 tactccctccgtcccctaatataagagattttgatattttacttgcactgtttgaccact 182
Query: 84 cgtcttatt 92
|||||||||
Sbjct: 181 cgtcttatt 173
Score = 48.1 bits (24), Expect = 7e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 225 aaaaaatcaaaataccttatattgtgggacagagggagta 264
|||| |||||||| ||||||||| |||||||||||||||
Sbjct: 41 aaaatatcaaaatcccttatattaggggacagagggagta 2
>RF00906;MIR1122;AAAA02004418.1/2515-2382 39946:Oryza sativa
Indica Group
Length = 134
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtctcataatataagtgattttgagtttttgcttgcaacgtttgaccact 64
Query: 84 cgtcttatt 92
|||||||||
Sbjct: 65 cgtcttatt 73
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 210 tcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggagtag 265
||||||||| || ||||||| ||||||| |||||||||||||||| ||||||||||
Sbjct: 76 tcaaacgttgcaagtaaaaactcaaaatcccttatattgtgggacggagggagtag 131
Score = 67.9 bits (34), Expect = 7e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgacca 81
|||||||||||| || ||||||||||||||| ||||||| |||| ||||||||||||
Sbjct: 130 tactccctccgtcccacaatataagggattttgagtttttacttgcaacgtttgacca 73
>RF01062;MIR812;AAAA02031122.1/7716-7886 39946:Oryza sativa Indica
Group
Length = 171
Score = 103 bits (52), Expect = 1e-21
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||| ||| ||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 171 gtttttgtttgcaacgtttgaccactcgtcttattcaaaattttttaaaattattattta 112
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttt 174
|||||||| ||| ||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 111 ttttatttatgatttactttattatctacggtactttaagcaaaacttttcgttttt 55
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttatt 92
|||| |||| |||||||||||||||||||||||
Sbjct: 3 tttttcttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01004632.1/2862-2689 39947:Oryza sativa Japonica
Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 105/125 (84%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
||||||||| |||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 173 tttttgctttcaacgtttgactactcgtcttattcaaaaatttttaaaattattatttat 114
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||||| ||||||||||||| | || |||||||| ||||||| |||||||||
Sbjct: 113 tttatttgtgactcactttattatctacagtattttaagcacaactttttgttttttata 54
Query: 179 tttgc 183
||||
Sbjct: 53 cttgc 49
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 aacgtttgaccactcgtcttatt 92
|||||||||||||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02006568.1/7398-7226 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 104 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 163
|||||||||| ||||||||||||||||||||||||||||||| | ||||||| ||| |||
Sbjct: 127 gaaattattatttattttatttgtgacttactttattatctacattactttatgcacaac 68
Query: 164 ttttcattttttatatttgc 183
|||| ||||||||||||||
Sbjct: 67 tttttgttttttatatttgc 48
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||| ||||||| |||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttaaccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01022757.1/36968-37137 39947:Oryza sativa
Japonica Group
Length = 170
Score = 103 bits (52), Expect = 1e-21
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||| |||| |||||||||||||||||| |||||||| |||||||||| |||
Sbjct: 170 gtttttacttgcaacgtttgaccactcgtcctattcaaatttttttgaaattattattta 111
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttt 174
|||||||| ||| ||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 110 ttttatttatgatttactttattatctacggtactttaagcaaaacttttcgttttt 54
>RF01062;MIR812;AAAA02034956.1/41821-41993 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 104 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 163
|||||||||| ||||||||||| |||||||||||||||| ||| |||||||| ||||||
Sbjct: 127 gaaattattatttattttatttctgacttactttattattcaaagtactttaaacataac 68
Query: 164 ttttcattttttatatttgc 183
|||| |||||||||||||||
Sbjct: 67 tttttattttttatatttgc 48
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 gtttgaccactcgtcttattcaa 95
|||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattcaa 38
>RF01058;MIR806;AAAA02019268.1/24292-24529 39946:Oryza sativa Indica
Group
Length = 238
Score = 103 bits (52), Expect = 1e-21
Identities = 117/140 (83%), Gaps = 1/140 (0%)
Strand = Plus / Plus
Query: 125 tgtgacttactttattatctaaaatactttaagcataacttttcattttttatatttgcn 184
|||||||| |||||||||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 99 tgtgacttgctttattatccaaagtactttaagcataacttttcgttttttatatttgca 158
Query: 185 nnnnnnntttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttat 244
|||||||||||| |||| |||||| | || | ||||| ||||||| ||||||
Sbjct: 159 caaattttttgaataagacgagtggtcaaacagtgcaag-aaaaactcaaaatcccttat 217
Query: 245 attgtgggacagagggagta 264
||| |||||| |||||||||
Sbjct: 218 attatgggacggagggagta 237
Score = 83.8 bits (42), Expect = 1e-15
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| |||||||||||||||||| ||||||| |||| | ||||||||||
Sbjct: 238 gtactccctccgtcccataatataagggattttgagttttt-cttgcactgtttgaccac 180
Query: 83 tcgtcttattcaaa 96
||||||||||||||
Sbjct: 179 tcgtcttattcaaa 166
>RF01058;MIR806;AAAA02003871.1/18652-18886 39946:Oryza sativa Indica
Group
Length = 235
Score = 103 bits (52), Expect = 1e-21
Identities = 134/161 (83%), Gaps = 8/161 (4%)
Strand = Plus / Plus
Query: 23 gtactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccac 82
||||||||||||| | |||||||||||||||| | ||||||||| | |||||||||
Sbjct: 1 gtactccctccgtcccctaatataagggattttgacattttgcttgcactgtttgaccat 60
Query: 83 tcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattat 142
|||||||||| ||| ||||| ||||||||| ||||||||||||||||||||
Sbjct: 61 tcgtcttattaaaaa-------aaattgg-aattattttttttgtgacttactttattat 112
Query: 143 ctaaaatactttaagcataacttttcattttttatatttgc 183
| ||| ||||||||||| || ||||||||||||||||||||
Sbjct: 113 ccaaagtactttaagcacaaattttcattttttatatttgc 153
Score = 58.0 bits (29), Expect = 7e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||| ||||| | ||||| ||| | |||||||||||
Sbjct: 234 tactccctccgtcccataatataagg-attttgacattttggttgcactgtttgaccact 176
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 175 cgtcttattcaaa 163
>RF01058;MIR806;AP008212.1/22380588-22380348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 103 bits (52), Expect = 1e-21
Identities = 132/160 (82%), Gaps = 2/160 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| ||||||||||| | |||||||||||
Sbjct: 240 tactccctccgtcccataatataagggattttgagtttttgcttacagtgtttgaccact 181
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| | |||||||| ||| || ||| | |||||||||| ||||
Sbjct: 180 cgtcttattcaaaaagttttgtaattattatttactt--ttttttacttactttactatc 123
Query: 144 taaaatactttaagcataacttttcattttttatatttgc 183
||||||||||| || |||| ||| ||||||||||||||
Sbjct: 122 caaaatactttacacacaactattcgttttttatatttgc 83
Score = 81.8 bits (41), Expect = 5e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 2 tactccctccgtcccataatataagggattttaagtttttgcttacagtgtttgaccact 61
Query: 84 cgtcttatt 92
| |||||||
Sbjct: 62 catcttatt 70
Score = 50.1 bits (25), Expect = 2e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| |||||| | | | ||||| ||||||| ||||||||| |||
Sbjct: 168 tttgaataagacgagtggtcaaacactgtaagcaaaaactcaaaatcccttatattatgg 227
Query: 252 gacagagggagta 264
||| |||||||||
Sbjct: 228 gacggagggagta 240
>RF01058;MIR806;AP005460.3/69018-68774 39947:Oryza sativa Japonica
Group
Length = 245
Score = 103 bits (52), Expect = 1e-21
Identities = 129/157 (82%)
Strand = Plus / Plus
Query: 26 ctccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccactcg 85
|||||||||| ||||||||||||||||||||||||||| ||||| ||||||| | |||
Sbjct: 4 ctccctccgtcccataatataagggattttaagtttttgtttgtactgtttgactaatcg 63
Query: 86 tcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatcta 145
||||||||||| |||||||| ||||||| || ||||||| ||||||||| |
Sbjct: 64 tcttattcaaaaaattttagaattattatttatttttcttatgacttagtttattatcca 123
Query: 146 aaatactttaagcataacttttcattttttatatttg 182
| | ||||||||| | |||||| |||||||||||||
Sbjct: 124 atgtgctttaagcacagcttttcgttttttatatttg 160
Score = 87.7 bits (44), Expect = 8e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| |||||||||||| | ||||||| |||
Sbjct: 244 tactccctccgtcccataatataagggattttgagtttttgcttgcactgtttgactact 185
Query: 84 cgtcttattcaa 95
||||||||||||
Sbjct: 184 cgtcttattcaa 173
>RF01062;MIR812;AAAA02014507.1/1802-1631 39946:Oryza sativa Indica
Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
||||| ||| ||||||| ||||||||||||||| ||| |||||||||| |||||
Sbjct: 170 ttttgtttgcaacgtttaaccactcgtcttatttaaaattttttgaaattattatttatt 111
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
||||||||||||||||||||||| || | || ||||| || |||||||| |||||||| |
Sbjct: 110 ttatttgtgacttactttattatatatagtattttaaacacaacttttcgttttttatgt 51
Query: 180 ttgc 183
||||
Sbjct: 50 ttgc 47
>RF01062;MIR812;AACV01010498.1/7513-7684 39947:Oryza sativa Japonica
Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| ||||||||||| ||||||||||||||||||| | |||||||||| ||||
Sbjct: 126 aaattattatttattttatttatgacttactttattatctatagtactttaagcgcaact 67
Query: 165 tttcattttttatatttgc 183
|||| ||||||||||||||
Sbjct: 66 tttcgttttttatatttgc 48
>RF01062;MIR812;AAAA02007696.1/4848-5012 39946:Oryza sativa Indica
Group
Length = 165
Score = 101 bits (51), Expect = 5e-21
Identities = 93/108 (86%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
|||||||||| | |||||||||||||||||||||||| |||||||||| ||||
Sbjct: 164 tttttgcttgcactgtttgaccactcgtcttattcaaaaaattttgaaattattatttat 105
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttt 166
||||||||||| ||||||||||||| ||| ||||||||||| ||||||
Sbjct: 104 tttatttgtgaattactttattatc-aaagtactttaagcacaacttt 58
>RF01062;MIR812;AP003770.3/133836-133664 39947:Oryza sativa Japonica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| |||||||||||||||||||||| |||| | ||| || |||||||||||||
Sbjct: 126 aaattattatttattttatttgtgacttacttgattacccaaagtattttaagcataact 67
Query: 165 tttcattttttatatttgc 183
|||| ||||||||||||||
Sbjct: 66 tttcgttttttatatttgc 48
>RF01062;MIR812;AAAA02003871.1/18852-18687 39946:Oryza sativa Indica
Group
Length = 166
Score = 101 bits (51), Expect = 5e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 113 aattattttatttgtgacttactttattatctaaaatactttaagcataacttttcattt 172
||||||||| ||||||||||||||||||||| ||| ||||||||||| || |||||||||
Sbjct: 119 aattattttttttgtgacttactttattatccaaagtactttaagcacaaattttcattt 60
Query: 173 tttatatttgc 183
|||||||||||
Sbjct: 59 tttatatttgc 49
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 gtttgaccactcgtcttattcaaa 96
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AC098598.2/95832-96004 39947:Oryza sativa Japonica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| |||||||||||| ||||||||||||| ||||||||| |||
Sbjct: 173 gtttttgcttgcaacgtttgaccaatcgtcttattcaattttttttaaaattattattta 114
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||| |||| |||||||| ||||| | |||||||| || ||||||| |||||||||
Sbjct: 113 ttttatttatgacgtactttatcatctacagtactttaaacacaactttttattttttat 54
Query: 178 attt 181
||||
Sbjct: 53 attt 50
>RF01062;MIR812;AAAA02022100.1/1294-1126 39946:Oryza sativa Indica
Group
Length = 169
Score = 101 bits (51), Expect = 5e-21
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||| |||
Sbjct: 124 aaattattatttatttt-tttatgacttactttattatctaaagtactttaagcatgact 66
Query: 165 tttcattttttatatttgc 183
|||| ||||||||||||||
Sbjct: 65 tttcgttttttatatttgc 47
>RF01062;MIR812;AACV01012425.1/11928-12097 39947:Oryza sativa
Japonica Group
Length = 170
Score = 101 bits (51), Expect = 5e-21
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 70 aacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtga 129
||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |
Sbjct: 158 aacgtttaaccactcgtcttattcaaaattttttgaaattattatttattttatttgtaa 99
Query: 130 cttactttattatctaaaatactttaagcataacttttcattttttatattt 181
||||||||||||| || | ||||||||||| | |||||| |||| |||||||
Sbjct: 98 cttactttattatttacagtactttaagcacaccttttcgttttctatattt 47
Score = 61.9 bits (31), Expect = 5e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||||||| |||||||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02007928.1/15883-15712 39946:Oryza sativa Indica
Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 74 tttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactta 133
||||||||||||||||||| ||| ||||||||| |||||||||||||||||||
Sbjct: 156 tttgaccactcgtcttatttaaatttttttaaaattattatttattttatttgtgactta 97
Query: 134 ctttattatctaaaatactttaagcataacttttcattttttatattt 181
||||||||| || | || ||||| |||||||||| |||||||||||||
Sbjct: 96 ctttattatttacagtattttaaacataactttttattttttatattt 49
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaa 95
|||||| ||| |||| ||||||||||||||||||||||
Sbjct: 1 gtttttacttataacatttgaccactcgtcttattcaa 38
>RF01062;MIR812;AP003450.3/144108-144282 39947:Oryza sativa Japonica
Group
Length = 175
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 109 tattaattattttatttgtgacttactttattatctaaaatactttaagcataacttttc 168
||||| ||||||||||||||||||||||||||||||| | ||||||||||| |||||||
Sbjct: 123 tattatttattttatttgtgacttactttattatctacagtactttaagcacaacttttt 64
Query: 169 attttttatatttgc 183
||||||||||||||
Sbjct: 63 gttttttatatttgc 49
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 aacgtttgaccactcgtcttatt 92
|||||||||||||||||||||||
Sbjct: 13 aacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01000006.1/18111-18284 39947:Oryza sativa
Japonica Group
Length = 174
Score = 101 bits (51), Expect = 5e-21
Identities = 105/124 (84%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
|||||||||| |||| ||||||||||||||||||||||| ||||||||| |||
Sbjct: 174 gtttttgcttataacatttgaccactcgtcttattcaaaaaattttaaaattattattta 115
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|||||||||||||||| ||| | ||||| ||||||||||| |||||||| ||||||||
Sbjct: 114 ttttatttgtgacttaatttgtcatctacg-tactttaagcacaacttttcgttttttat 56
Query: 178 attt 181
||||
Sbjct: 55 attt 52
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 66 ttgtaacgtttgaccactcgtcttattcaaa 96
|||||| ||||||||||||||||||||||||
Sbjct: 10 ttgtaatgtttgaccactcgtcttattcaaa 40
>RF01062;MIR812;AAAA02016795.1/25353-25180 39946:Oryza sativa Indica
Group
Length = 174
Score = 101 bits (51), Expect = 5e-21
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
||||||||| | ||||||||| |||||||||||||| |||||||||| |||||
Sbjct: 172 ttttgcttgcactgtttgaccattcgtcttattcaaaaaattttgaaattattatttatt 113
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttt 175
|||||||||||||||||||||| ||||| || |||||||| | |||||| ||||||
Sbjct: 112 ttatttgtgacttactttattacctaaagtattttaagcacatcttttcgtttttt 57
>RF01062;MIR812;AACV01002034.1/7389-7217 39947:Oryza sativa Japonica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| ||||||||||||||||||| ||||||||| | | ||||||||||| ||||
Sbjct: 126 aaattattatttattttatttgtgacttattttattatccacagtactttaagcacaact 67
Query: 165 tttcattttttatatttgc 183
|||| ||||||||||||||
Sbjct: 66 tttcgttttttatatttgc 48
>RF01062;MIR812;AY749282.1/500-327 40149:Oryza meridionalis
Length = 174
Score = 101 bits (51), Expect = 5e-21
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
||||||||| ||||||||||||||||| ||||| ||| ||||||||| ||||
Sbjct: 173 tttttgcttacaacgtttgaccactcgttttatttaaaattttttaaaattattatttat 114
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttt 174
||||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 113 tttatttgtgacttactttattatctaccgtactttaagcacaacttttcgttttt 58
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtctt 89
||||||||||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtctt 32
>RF01062;MIR812;AAAA02017733.1/16042-16214 39946:Oryza sativa Indica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
||||||||| ||||||||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct: 126 aaattattatttattttatttgtgacttattttattatctaccgtactttaagtataact 67
Query: 165 tttcattttttatatttgc 183
|||| ||||||||||||||
Sbjct: 66 tttcgttttttatatttgc 48
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttatt 92
||||||| |||||| |||||||||||||| |||||
Sbjct: 1 gtttttgattgtaatgtttgaccactcgttttatt 35
>RF01062;MIR812;AAAA02011985.1/3215-3046 39946:Oryza sativa Indica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 127/157 (80%), Gaps = 3/157 (1%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
|||||||||||| |||||||||||||||||||| ||| |||||||| ||||
Sbjct: 169 tttttgcttgtactgtttgaccactcgtcttatttaaaacattttagaattattatttat 110
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||| ||| |||||||||||||| |||| || ||||||||||||||||| |||||||||
Sbjct: 109 ttttttt---acttactttattatataaagtattttaagcataacttttcgttttttata 53
Query: 179 tttgcnnnnnnnntttgaataagactagtgatcaaac 215
||||| |||||||||||| |||||||||||
Sbjct: 52 tttgcataaattttttgaataagacgagtgatcaaac 16
>RF01062;MIR812;AAAA02000336.1/19369-19541 39946:Oryza sativa Indica
Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| |||||||||||||||||| |||||||||| ||| ||||||||||| |||||
Sbjct: 124 aattattatttattttatttgtgactt-ctttattatccaaagtactttaagcacaactt 66
Query: 166 ttcattttttatatttgc 183
||| ||||||||||||||
Sbjct: 65 ttcgttttttatatttgc 48
>RF01062;MIR812;AC113333.2/54699-54527 39947:Oryza sativa Japonica
Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
|||||||||||||||||||||||| ||||||||| |||||||||||| |||||
Sbjct: 158 gtttgaccactcgtcttattcaaaaaattttaaaattattatttattttatttgagactt 99
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgc 183
|||||||||||| | |||||||| || ||||||| ||||||||||||||
Sbjct: 98 gctttattatctacagtactttaatcacaactttttgttttttatatttgc 48
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttatt 92
||||||||| |||||||||||||||||| |||||
Sbjct: 2 tttttgcttataacgtttgaccactcgttttatt 35
>RF01062;MIR812;AACV01010066.1/9500-9324 39947:Oryza sativa Japonica
Group
Length = 177
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||||||| || |||||||||||| ||||| ||||||||||| |||||
Sbjct: 125 aattattatttattttatttatggcttactttattacctaaagtactttaagcacaactt 66
Query: 166 ttcattttttatatttgc 183
||| ||||||||||||||
Sbjct: 65 ttcgttttttatatttgc 48
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 gtttgaccactcgtcttattcaaa 96
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02004436.1/4027-4199 39946:Oryza sativa Indica
Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 107/127 (84%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||
Sbjct: 173 gtttttgcttgcaacgtttgaccactcgtcttattcaaaattttttgaaatcattattta 114
Query: 118 ttttatttgtgacttacttt-attatctaaaatactttaagcataacttttcatttttta 176
|||||||| |||||| ||| |||||||| | |||||||| || |||||||| ||||||
Sbjct: 113 ttttatttatgacttcttttcattatctacagtactttaaacacaacttttccgttttta 54
Query: 177 tatttgc 183
|||||||
Sbjct: 53 tatttgc 47
>RF01062;MIR812;AACV01002066.1/11353-11523 39947:Oryza sativa
Japonica Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 69 taacgtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtg 128
|||||||||| || |||||||||||||| |||||||||| ||||||||||||||
Sbjct: 162 taacgtttgatcattcgtcttattcaaagtattaggaaattattatttattttatttgtg 103
Query: 129 acttactttattatctaaaatactttaagcataacttttcattttttatatttgc 183
|||| ||| |||||| ||| ||||||||| || |||| || ||||||||||||||
Sbjct: 102 acttgcttaattatcaaaagtactttaaggatgacttatcgttttttatatttgc 48
>RF01062;MIR812;AACV01015652.1/8579-8752 39947:Oryza sativa Japonica
Group
Length = 174
Score = 99.6 bits (50), Expect = 2e-20
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 59 tttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattat 118
|||||||||| | | |||||||| |||||||||||||| | |||||||| | |
Sbjct: 173 tttttgcttgcaccatttgaccattcgtcttattcaaaaaattttggaattattattatt 114
Query: 119 tttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttata 178
||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||||||
Sbjct: 113 tttatttgtgacttactttattatccaaagtactttaagcacaactttttgttttttata 54
Query: 179 ttt 181
|||
Sbjct: 53 ttt 51
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 gtttgaccactcgtcttattcaaa 96
||||||||||||||||||||||||
Sbjct: 17 gtttgaccactcgtcttattcaaa 40
>RF01062;MIR812;AC091246.8/135795-135624 39947:Oryza sativa Japonica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| || ||
Sbjct: 125 aattattatttattttatctgtgacttactttattatctaaagtactttaagcacaattt 66
Query: 166 ttcattttttatatttgc 183
||| ||||||||| ||||
Sbjct: 65 ttcgttttttataattgc 48
>RF01062;MIR812;AAAA02008540.1/15529-15363 39946:Oryza sativa Indica
Group
Length = 167
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/77 (92%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 120 aattattatttattttttttg--acttactttattatccaaaatactttaagcataactt 63
Query: 166 ttcattttttatatttg 182
||| |||||||||||||
Sbjct: 62 ttcgttttttatatttg 46
>RF01062;MIR812;AC138002.3/110336-110507 39947:Oryza sativa Japonica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| |||||
Sbjct: 123 aattattatttattttatttgtgacttactttattatccaaagtactttaagcacaactt 64
Query: 166 ttcattttttatatttgc 183
||| |||||||||||||
Sbjct: 63 ttc-gtttttatatttgc 47
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 69 taacgtttgaccactcgtcttattc 93
|||||||||||||||||||||||||
Sbjct: 11 taacgtttgaccactcgtcttattc 35
>RF01062;MIR812;AACV01016974.1/17663-17832 39947:Oryza sativa
Japonica Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 73/80 (91%), Gaps = 3/80 (3%)
Strand = Plus / Minus
Query: 104 gaaattattaattattttatttgtgacttactttattatctaaaatactttaagcataac 163
|||||||||| ||||||| || |||||||||||||||| ||||||||||||||| |||
Sbjct: 124 gaaattattatttattttttt---gacttactttattatccaaaatactttaagcacaac 68
Query: 164 ttttcattttttatatttgc 183
||||||||||||||||||||
Sbjct: 67 ttttcattttttatatttgc 48
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 74 tttgaccactcgtcttattcaaa 96
|||||||||||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AP008218.1/11279875-11280047 39947:Oryza sativa
Japonica Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 125 aattattatttattttatttgtgacttactttattatccaaagtactttaagctcaactt 66
Query: 166 ttcattttttatatttgc 183
||| ||||| ||||||||
Sbjct: 65 ttcgtttttgatatttgc 48
>RF01062;MIR812;AACV01010637.1/22787-22956 39947:Oryza sativa
Japonica Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 114 attattttatttgtgacttactttattatctaaaatactttaagcataacttttcatttt 173
|||||||| ||||||||||||||||||||| ||||||||||||||| |||||| | ||||
Sbjct: 118 attattttgtttgtgacttactttattatccaaaatactttaagcacaactttccgtttt 59
Query: 174 ttatatttgc 183
||||||||||
Sbjct: 58 ttatatttgc 49
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 gtttgaccactcgtcttattcaaa 96
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01004445.1/22463-22634 39947:Oryza sativa
Japonica Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
|||||||||||||||||||||||| |||||||| ||||||| ||||||||||
Sbjct: 157 gtttgaccactcgtcttattcaaaaaattttagaattattatttattttttttgtgactt 98
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttgc 183
||||||||||||||| ||||||||||| || ||||| | ||||||||||||
Sbjct: 97 actttattatctaaagtactttaagcacaa-ttttcgtattttatatttgc 48
>RF01062;MIR812;AAAA02006555.1/11770-11599 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 108/127 (85%), Gaps = 2/127 (1%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnnga-aattattaatt 116
||||||||||||| ||||||||||||||||||||||| | |||||||| ||
Sbjct: 172 gtttttgcttgtattatttgaccactcgtcttattcaaaaaaattttagaattattattt 113
Query: 117 attttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttta 176
||||| ||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||
Sbjct: 112 atttt-tttgtgacttactttattatccaaagtactttaagcacaacttttcgcttttta 54
Query: 177 tatttgc 183
|||||||
Sbjct: 53 tatttgc 47
>RF01058;MIR806;ABRL01000391.1/1735-1498 65489:Oryza barthii
Length = 238
Score = 99.6 bits (50), Expect = 2e-20
Identities = 191/242 (78%), Gaps = 7/242 (2%)
Strand = Plus / Plus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||| ||||||| ||||||||||| |||||| ||||||| || |||||||||||||||
Sbjct: 2 tacttcctccgtcccataatataagagattttgagtttttctttataacgtttgaccact 61
Query: 84 cgtcttattcaaannnnnnngaaattattaattattttatttgtgacttactttattatc 143
||||||||||||| |||||| || || ||| |||||||||||||||||
Sbjct: 62 cgtcttattcaaaaaattttaaaattagta------ttttttttgacttactttattatc 115
Query: 144 taaaatactttaagcataacttttcattttttatattt-gcnnnnnnnntttgaataaga 202
|| |||||||||| | |||||||| |||||||||||| | |||||||||||
Sbjct: 116 tacgatactttaagaacaacttttcgttttttatatttggaaaaaaaaatttgaataaga 175
Query: 203 ctagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgggacagagggag 262
| ||| ||||||||| || ||||| ||||||| ||||||||| |||||| |||||||
Sbjct: 176 cgagtagtcaaacgttgcaatgaaaaactcaaaatcccttatattatgggacggagggag 235
Query: 263 ta 264
||
Sbjct: 236 ta 237
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 24 tactccctccgtatcataatataagggattttaagtttttgcttgtaacgtttgaccact 83
|||||||||||| |||||||||||||||||| ||||||| ||| |||||||||| |||
Sbjct: 237 tactccctccgtcccataatataagggattttgagtttttcattgcaacgtttgactact 178
Query: 84 cgtcttattcaaa 96
|||||||||||||
Sbjct: 177 cgtcttattcaaa 165
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 192 tttgaataagactagtgatcaaacgttacatgtaaaaaatcaaaataccttatattgtgg 251
|||||||||||| |||| |||||||||| | ||||| ||||||| |||||||| |||
Sbjct: 74 tttgaataagacgagtggtcaaacgttataaagaaaaactcaaaatctcttatattatgg 15
Query: 252 gacagagggagtag 265
||| |||| |||||
Sbjct: 14 gacggaggaagtag 1
>RF01062;MIR812;AP002900.2/82321-82150 39947:Oryza sativa Japonica
Group
Length = 172
Score = 97.6 bits (49), Expect = 8e-20
Identities = 80/93 (86%)
Strand = Plus / Minus
Query: 123 tttgtgacttactttattatctaaaatactttaagcataacttttcattttttatatttg 182
||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||
Sbjct: 108 tttgtgacttactttattatccaaagtactttaagtgtaacttttcattttttatatttg 49
Query: 183 cnnnnnnnntttgaataagactagtgatcaaac 215
| |||||||||||| |||||||||||
Sbjct: 48 cacaaattttttgaataagacgagtgatcaaac 16
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||||| |||||| |||||||||||||||||
Sbjct: 1 gtttttgcttgtactgtttgatcactcgtcttattcaaa 39
>RF01062;MIR812;AAAA02009039.1/27863-28030 39946:Oryza sativa Indica
Group
Length = 168
Score = 97.6 bits (49), Expect = 8e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 127 tgacttactttattatctaaaatactttaagcataacttttcattttttatatttgc 183
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 104 tgacttactttattatctaaattactttaagcacaacttttcattttttatatttgc 48
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gtttttgcttgtactgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01007311.1/13690-13517 39947:Oryza sativa
Japonica Group
Length = 174
Score = 97.6 bits (49), Expect = 8e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 105 aaattattaattattttatttgtgacttactttattatctaaaatactttaagcataact 164
|||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||
Sbjct: 127 aaattattttttattttatttgtgacttactttattatccaaagaactttaagcacaact 68
Query: 165 tttcattttttatattt 181
|||| ||||||||||||
Sbjct: 67 tttcgttttttatattt 51
>RF01062;MIR812;AAAA02010901.1/16278-16093 39946:Oryza sativa Indica
Group
Length = 186
Score = 97.6 bits (49), Expect = 8e-20
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| ||||||||||||||||||||||||||| |||||||| |||
Sbjct: 186 gtttttgcttgcaacgtttgaccactcgtcttattcaaaaatttttaaaattatttttta 127
Query: 118 ttttatttgtgacttactttattatctaaaatacttta 155
|||||||||| ||||||||||||||||| | |||||||
Sbjct: 126 ttttatttgtaacttactttattatctacagtacttta 89
Score = 46.1 bits (23), Expect = 3e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||||| | |||||||||||||||| ||||||||||
Sbjct: 1 gtttttgctagcaacgtttgaccactcg-cttattcaaa 38
>RF01062;MIR812;AP008218.1/12955264-12955092 39947:Oryza sativa
Japonica Group
Length = 173
Score = 97.6 bits (49), Expect = 8e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 106 aattattaattattttatttgtgacttactttattatctaaaatactttaagcataactt 165
|||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||
Sbjct: 125 aattattatttattttatttgtgacttactttattatccaaagcactttaaatataactt 66
Query: 166 ttcattttttatatttg 182
|| ||||||||||||||
Sbjct: 65 tttattttttatatttg 49
>RF01062;MIR812;AC137698.1/47445-47274 39947:Oryza sativa Japonica
Group
Length = 172
Score = 97.6 bits (49), Expect = 8e-20
Identities = 106/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaatta 117
||||||||||| | |||||||||||||||||||||||| |||||||| |||
Sbjct: 172 gtttttgcttgcactgtttgaccactcgtcttattcaaaaaaaattagaattattattta 113
Query: 118 ttttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttat 177
|| | ||||||||||||||||||||| ||| ||||||||||| ||| |||| ||||||||
Sbjct: 112 ttgtttttgtgacttactttattatccaaattactttaagcacaac-tttcgttttttat 54
Query: 178 atttgc 183
||||||
Sbjct: 53 atttgc 48
>RF01062;MIR812;AP003974.3/44511-44684 39947:Oryza sativa Japonica
Group
Length = 174
Score = 97.6 bits (49), Expect = 8e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 107 attattaattattttatttgtgacttactttattatctaaaatactttaagcataacttt 166
||||||| ||||||||||| ||||||||||||||||| ||| || ||| |||| ||||||
Sbjct: 124 attattatttattttatttatgacttactttattatccaaagtattttcagcacaacttt 65
Query: 167 tcattttttatatttgc 183
|||||||||||||||||
Sbjct: 64 tcattttttatatttgc 48
>RF01062;MIR812;AAAA02002384.1/5529-5357 39946:Oryza sativa Indica
Group
Length = 173
Score = 97.6 bits (49), Expect = 8e-20
Identities = 102/122 (83%)
Strand = Plus / Minus
Query: 60 ttttgcttgtaacgtttgaccactcgtcttattcaaannnnnnngaaattattaattatt 119
|||| |||| || |||||| ||||||||||||||||| ||||||||| |||||
Sbjct: 171 ttttacttgcaatgtttgatcactcgtcttattcaaaattttttaaaattattatttatt 112
Query: 120 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 179
||||||| |||||||||||||||||| |||| |||||| | || ||||| ||||||||||
Sbjct: 111 ttatttgcgacttactttattatctacaatattttaagtacaatttttcgttttttatat 52
Query: 180 tt 181
||
Sbjct: 51 tt 50
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 58 gtttttgcttgtaacgtttgaccactcgtcttattcaaa 96
||||||| |||||| ||||||||||||||||||||||||
Sbjct: 1 gtttttgtttgtaatgtttgaccactcgtcttattcaaa 39
>RF01062;MIR812;AACV01018193.1/34010-34180 39947:Oryza sativa
Japonica Group
Length = 171
Score = 97.6 bits (49), Expect = 8e-20
Identities = 94/110 (85%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 73 gtttgaccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgactt 132
|||||||||||||||||||| ||| | |||||||| |||||| |||| ||||||
Sbjct: 156 gtttgaccactcgtcttattaaaaaatttttggaattattatttattt-atttttgactt 98
Query: 133 actttattatctaaaatactttaagcataacttttcattttttatatttg 182
||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 97 actttattatctaaagtactttaagcgcaacttttcgttttttatatttg 48
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 gtttgaccactcgtcttattcaaa 96
||||||||||||||||||||||||
Sbjct: 16 gtttgaccactcgtcttattcaaa 39
