miRNEST 2.0, an integrative microRNA resource :: BLAST
>41644_vvi-MIR394b:mirbase
Length = 93
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcccatct 25
|||||||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcccatct 35
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tggaggtgggcatactgccaa 76
|||||||||||||||||||||
Sbjct: 61 tggaggtgggcatactgccaa 81
>41424_ptc-MIR394b:mirbase
Length = 147
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcccatctgtagaaat 33
|||||||||||||||||||| |||| |||||||
Sbjct: 38 ttggcattctgtccacctcctatctttagaaat 70
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 atggaggtgggcatactgccaa 76
||||||||||||||||||||||
Sbjct: 88 atggaggtgggcatactgccaa 109
>41423_ptc-MIR394b:mirbase
Length = 147
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcccatctgtagaaat 33
|||||||||||||||||||| |||| |||||||
Sbjct: 38 ttggcattctgtccacctcctatctttagaaat 70
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 atggaggtgggcatactgccaa 76
||||||||||||||||||||||
Sbjct: 88 atggaggtgggcatactgccaa 109
>41422_ptc-MIR394a:mirbase
Length = 147
Score = 48.1 bits (24), Expect = 9e-07
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcccatctgtagaaa 32
|||||||||||||||||| |||||||||||||
Sbjct: 38 ttggcattctgtccacct-ccatctgtagaaa 68
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tggaggtgggcatactgccaa 76
|||||||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaa 109
>41421_ptc-MIR394a:mirbase
Length = 147
Score = 48.1 bits (24), Expect = 9e-07
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcccatctgtagaaa 32
|||||||||||||||||| |||||||||||||
Sbjct: 38 ttggcattctgtccacct-ccatctgtagaaa 68
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tggaggtgggcatactgccaa 76
|||||||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaa 109
>41134_tcc-MIR394a:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcccatc 24
||||||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcccatc 44
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 catggaggtgggcatactgccaa 76
|||||||||||||||||||||||
Sbjct: 76 catggaggtgggcatactgccaa 98
>41239_csi-MIR394:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 catggaggtgggcatactgccaa 76
|||||||||||||||||||||||
Sbjct: 103 catggaggtgggcatactgccaa 125
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 17 ttggcattctgtccacctcc 36
>41055_ghr-MIR394a:mirbase
Length = 167
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 catggaggtgggcatactgccaa 76
|||||||||||||||||||||||
Sbjct: 103 catggaggtgggcatactgccaa 125
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctccc 21
|||||||||||||||||||||
Sbjct: 43 ttggcattctgtccacctccc 63
>42790_zma-MIR394b:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctccc 21
|||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctccc 41
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tggaggtgggcatactgccaa 76
|||||||||||||||||||||
Sbjct: 83 tggaggtgggcatactgccaa 103
>42789_zma-MIR394a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tggaggtgggcatactgccaa 76
|||||||||||||||||||||
Sbjct: 87 tggaggtgggcatactgccaa 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>42569_sbi-MIR394b:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tggaggtgggcatactgccaa 76
|||||||||||||||||||||
Sbjct: 53 tggaggtgggcatactgccaa 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 2 ttggcattctgtccacctcc 21
>42000_osa-MIR394:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tggaggtgggcatactgccaa 76
|||||||||||||||||||||
Sbjct: 76 tggaggtgggcatactgccaa 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
>41776_bdi-MIR394:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tggaggtgggcatactgccaa 76
|||||||||||||||||||||
Sbjct: 125 tggaggtgggcatactgccaa 145
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 53 ttggcattctgtccacctcc 72
>42568_sbi-MIR394a:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>41645_vvi-MIR394c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>41643_vvi-MIR394a:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>41135_tcc-MIR394b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>41056_ghr-MIR394b:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 35 ttggcattctgtccacctcc 54
>40472_gma-MIR394b:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 13 ttggcattctgtccacctcc 32
>40471_gma-MIR394a:mirbase
Length = 157
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 39 ttggcattctgtccacctcc 58
>40402_ahy-MIR394:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 22 ttggcattctgtccacctcc 41
>40078_ath-MIR394b:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggaggtgggcatactgccaa 76
||||||||||||||||||||
Sbjct: 88 ggaggtgggcatactgccaa 107
>40077_ath-MIR394a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
>39868_aly-MIR394b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 41 ttggcattctgtccacctcc 60
>39867_aly-MIR394a:mirbase
Length = 220
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 68 ttggcattctgtccacctcc 87
