miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54852_vvi-miR394b:pmrd
          Length = 93

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  ttggcattctgtccacctcccatct 25
          |||||||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcccatct 35



 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggaggtgggcatactgccaa 76
          |||||||||||||||||||||
Sbjct: 61 tggaggtgggcatactgccaa 81




>51918_ptc-miRf10096-akr:pmrd
          Length = 121

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 1  ttggcattctgtccacctcccatctgtagaaat 33
          |||||||||||||||||||| |||| |||||||
Sbjct: 25 ttggcattctgtccacctcctatctttagaaat 57



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 55 atggaggtgggcatactgccaa 76
          ||||||||||||||||||||||
Sbjct: 75 atggaggtgggcatactgccaa 96




>55065_zma-miR394b:pmrd
          Length = 122

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttggcattctgtccacctccc 21
          |||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctccc 41



 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 56  tggaggtgggcatactgccaa 76
           |||||||||||||||||||||
Sbjct: 83  tggaggtgggcatactgccaa 103




>55064_zma-miR394a:pmrd
          Length = 126

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 56  tggaggtgggcatactgccaa 76
           |||||||||||||||||||||
Sbjct: 87  tggaggtgggcatactgccaa 107



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttggcattctgtccacctcc 20
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>48920_osa-miR394:pmrd
          Length = 110

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggaggtgggcatactgccaa 76
          |||||||||||||||||||||
Sbjct: 76 tggaggtgggcatactgccaa 96



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttggcattctgtccacctcc 20
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33




>54853_vvi-miR394c:pmrd
          Length = 102

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttggcattctgtccacctcc 20
          ||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30




>54851_vvi-miR394a:pmrd
          Length = 89

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttggcattctgtccacctcc 20
          ||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30




>54472_sbi-miR394b:pmrd
          Length = 111

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttggcattctgtccacctcc 20
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>54471_sbi-miR394a:pmrd
          Length = 110

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttggcattctgtccacctcc 20
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>48502_ghr-miR394:pmrd
          Length = 97

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttggcattctgtccacctcc 20
          ||||||||||||||||||||
Sbjct: 1  ttggcattctgtccacctcc 20




>47001_ath-miR394b:pmrd
          Length = 121

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttggcattctgtccacctcc 20
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 57  ggaggtgggcatactgccaa 76
           ||||||||||||||||||||
Sbjct: 88  ggaggtgggcatactgccaa 107




>47000_ath-miR394a:pmrd
          Length = 117

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttggcattctgtccacctcc 20
          ||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33