miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40434_gma-MIR159c:mirbase
          Length = 185

 Score =  178 bits (90), Expect = 9e-46
 Identities = 147/166 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaattcat 60
           ||||||||||| |||||||    ||||||| |||| |||| ||||| |||||||||||||
Sbjct: 9   tggagctctctacactccaagtctgaaggaagtgacggtagacccttgctgctaattcat 68

                                                                       
Query: 61  ggttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaatatgga 120
           |||||||||||| |||  ||||||||||||||||||||||||||| | ||||||| || |
Sbjct: 69  ggttacctttggattcagataaggaagcatgtgaaagtcatgggtctgcatgaatttgaa 128

                                                         
Query: 121 gacggggttgccttgatcttttggtattggagtgaagggagctccg 166
           ||||||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 129 gacggggctaccttgatcttttagtattggagtgaagggagctccg 174




>40433_gma-MIR159b:mirbase
          Length = 186

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 131 ccttgatcttttggtattggagtgaagggagctcc 165
           |||||||||||||||||||||||||||||||||||
Sbjct: 141 ccttgatcttttggtattggagtgaagggagctcc 175




>41303_ptc-MIR159e:mirbase
          Length = 192

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                    
Query: 126 ggttgccttgatctttt-ggtattggagtgaagggagctcc 165
           ||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 142 ggttgccttgatctttttggtcttggggtgaagggagctcc 182




>41570_vvi-MIR159a:mirbase
          Length = 194

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 37/40 (92%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                   
Query: 126 ggttgccttgatcttt-tggtattggagtgaagggagctc 164
           |||||||||||||||| |||  ||||||||||||||||||
Sbjct: 143 ggttgccttgatctttctggccttggagtgaagggagctc 182




>41304_ptc-MIR159f:mirbase
          Length = 201

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 138 cttttggtattggagtgaagggagctc 164
           ||||| |||||||||||||||||||||
Sbjct: 165 ctttttgtattggagtgaagggagctc 191