miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46936_ath-miR160c:pmrd
Length = 89
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccacgagtggataccgattttggttttaaaatcggctgccggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgccacgagtggataccgattttggttttaaaatcggctgccggt 65
Query: 61 ggcgtacaaggagtcaagc 79
|||||||||||||||||||
Sbjct: 66 ggcgtacaaggagtcaagc 84
>54947_zma-miR160m:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54946_zma-miR160i:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 3 gcctggctccctgtatgccac 23
>54945_zma-miR160h:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54944_zma-miR160g:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54942_zma-miR160e:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 10 gcctggctccctgtatgccac 30
>54941_zma-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgccac 42
>54940_zma-miR160c:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgccac 28
>54939_zma-miR160b:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgccac 42
>54938_zma-miR160a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 11 gcctggctccctgtatgccac 31
>54780_vvi-miR160c:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccac 32
>54759_ttu-miR160a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54675_tae-miR160:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 23 gcctggctccctgtatgccac 43
>54575_smo-miR160b:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 14 gcctggctccctgtatgccac 34
>54408_sbi-miR160e:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54407_sbi-miR160d:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54406_sbi-miR160c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54405_sbi-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54404_sbi-miR160a:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 13 gcctggctccctgtatgccac 33
>51611_ptc-miR160d:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccac 32
>51608_ptc-miR160a:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccac 32
>51367_ppt-miR160i:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>51364_ppt-miR160f:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>51363_ppt-miR160e:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>51359_ppt-miR160a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccac 32
>51334_pga-miR160:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>48833_osa-miR160n:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>48832_osa-miR160m:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>48829_osa-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 9 gcctggctccctgtatgccac 29
>48828_osa-miR160c:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgccac 28
>48827_osa-miR160b:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>48826_osa-miR160a:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgccac 25
>48791_oba-miR160:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgccac 25
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgccac 26
>46935_ath-miR160b:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgccac 26
>54783_vvi-miR160f:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>54781_vvi-miR160d:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>54574_smo-miR160a:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>54541_sly-miR160a:pmrd
Length = 129
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 21 gcctggctccctgtatgcca 40
>51610_ptc-miR160c:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51609_ptc-miR160b:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51360_ppt-miR160b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>48704_mtr-miR160e:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>48703_mtr-miR160d:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>48702_mtr-miR160b:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>48658_hvv-miR160a:pmrd
Length = 344
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 325 gcctggctccctgtatgcca 344
>48542_gma-miR160a:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>48397_bra-miR160a:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 27 gcctggctccctgtatgcca 46
>48396_bra-miR160a:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 27 gcctggctccctgtatgcca 46
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>46934_ath-miR160a:pmrd
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>46865_aqc-miR160b:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
