miRNEST 2.0, an integrative microRNA resource :: BLAST
>40359_rco-MIR171a:mirbase
Length = 92
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 55 tgctttttgattgagccgtgccaatatcac 84
||||||||||||||||||||||||||||||
Sbjct: 57 tgctttttgattgagccgtgccaatatcac 86
>41216_crt-MIR171:mirbase
Length = 201
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 56 gctttttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||||||
Sbjct: 155 gctttttgattgagccgtgccaatatcac 183
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tttttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||||
Sbjct: 66 tttttgattgagccgtgccaatatcac 92
>41982_osa-MIR171b:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 59 ttttgattgagccgtgccaatatcac 84
||||||||||||||||||||||||||
Sbjct: 67 ttttgattgagccgtgccaatatcac 92
>42762_zma-MIR171b:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatcac 144
>41983_osa-MIR171c:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatcac 91
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatcac 86
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcac 89
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatatcac 93
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatcac 94
>41231_csi-MIR171a:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 56 gctttttgattgagccgtgccaatatcac 84
||||||||||||||||| |||||||||||
Sbjct: 61 gctttttgattgagccgcgccaatatcac 89
>41211_ccl-MIR171:mirbase
Length = 321
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 56 gctttttgattgagccgtgccaatatcac 84
||||||||||||||||| |||||||||||
Sbjct: 116 gctttttgattgagccgcgccaatatcac 144
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatcac 99
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatcac 99
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcac 89
>40457_gma-MIR171c:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatcac 94
>40360_rco-MIR171b:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcac 85
>40318_bra-MIR171a:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
>40305_bol-MIR171a:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcac 90
>40289_bna-MIR171e:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcac 89
>40288_bna-MIR171d:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcac 90
>40062_ath-MIR171c:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatcac 109
>39851_aly-MIR171c:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatcac 84
|||||||||||||||||||||||||
Sbjct: 72 tttgattgagccgtgccaatatcac 96
>42769_zma-MIR171i:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 ttgattgagccgtgccaatatcac 84
||||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatcac 87
>42766_zma-MIR171f:mirbase
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 ttgattgagccgtgccaatatcac 84
||||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatcac 137
>41540_sly-MIR171c:mirbase
Length = 121
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 57 ctttttgattgagccgtgccaatatcac 84
|||||||||||||||| |||||||||||
Sbjct: 73 ctttttgattgagccgcgccaatatcac 100
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 ttttgattgagccgtgccaatatc 82
||||||||||||||||||||||||
Sbjct: 81 ttttgattgagccgtgccaatatc 104
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 ttttgattgagccgtgccaatatc 82
||||||||||||||||||||||||
Sbjct: 118 ttttgattgagccgtgccaatatc 141
>40364_rco-MIR171f:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 ttttgattgagccgtgccaatatc 82
||||||||||||||||||||||||
Sbjct: 83 ttttgattgagccgtgccaatatc 106
>42770_zma-MIR171j:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgtgccaatatcac 84
|||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatcac 112
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgtgccaatatcac 84
|||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatcac 115
>41986_osa-MIR171f:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgtgccaatatcac 84
|||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatcac 119
>41538_sly-MIR171a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatc 82
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatc 82
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgtgccaatatcac 84
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgtgccaatatcac 84
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 60 tttgattgagccgtgccaatatc 82
|||||||||||||||||||||||
Sbjct: 23 tttgattgagccgtgccaatatc 1
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgtgccaatatcac 84
|||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatcac 77
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatc 82
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgtgccaatatcac 84
|||||||||||||||||||||||
Sbjct: 75 tgattgagccgtgccaatatcac 97
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatc 82
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatc 82
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 ttttgattgagccgtgccaatat 81
|||||||||||||||||||||||
Sbjct: 77 ttttgattgagccgtgccaatat 99
>40454_gma-MIR171a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 tttttgattgagccgtgccaatatcac 84
||||| |||||||||||||||||||||
Sbjct: 64 tttttcattgagccgtgccaatatcac 90
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 tttgattgagccgtgccaatatc 82
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>42641_tae-MIR171b:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgtgccaatatcac 84
||||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatcac 111
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgtgccaatatca 83
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgtgccaatatca 83
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>40321_bra-MIR171d:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgtgccaatatcac 84
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40320_bra-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgtgccaatatcac 84
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40319_bra-MIR171b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgtgccaatatcac 84
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40287_bna-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgtgccaatatcac 84
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40286_bna-MIR171b:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgtgccaatatcac 84
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40285_bna-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgtgccaatatcac 84
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40061_ath-MIR171b:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgtgccaatatcac 84
||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcac 97
>39850_aly-MIR171b:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgtgccaatatcac 84
||||||||||||||||||||||
Sbjct: 87 gattgagccgtgccaatatcac 108
>39736_smo-MIR171a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgtgccaatatcac 84
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
