miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01005;MIR530;AC182714.2/17566-17395 3694:Populus trichocarpa
          Length = 172

 Score =  200 bits (101), Expect = 4e-51
 Identities = 134/148 (90%), Gaps = 14/148 (9%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21  tgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaag 80

                                                                       
Query: 61  ttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaataa 120
           ||||||||||||||||||||||||||              ||||||||||||||||||||
Sbjct: 81  ttctgtcgatacagtatgtgggacaa--------------ttagatatggaaactaataa 126

                                       
Query: 121 gcttagttgaggtgcaggtgcaagtgca 148
           ||||||||||||||||||||||||||||
Sbjct: 127 gcttagttgaggtgcaggtgcaagtgca 154