miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42102_osa-MIR528:mirbase
          Length = 88

 Score =  174 bits (88), Expect = 1e-44
 Identities = 88/88 (100%)
 Strand = Plus / Plus

                                                                       
Query: 19  agtggaaggggcatgcagaggagcaggagattcagtttgaagctggacttcacttttgcc 78
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agtggaaggggcatgcagaggagcaggagattcagtttgaagctggacttcacttttgcc 60

                                       
Query: 79  tctctctcctgtgcttgcctcttccatt 106
           ||||||||||||||||||||||||||||
Sbjct: 61  tctctctcctgtgcttgcctcttccatt 88




>41806_bdi-MIR528:mirbase
          Length = 160

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                    
Query: 4  ggctgtagcagcagcagtggaaggggcatgcagaggagcagg 45
          ||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 19 ggctggagcagcagcggtggaaggggcatgcagaggagcagg 60



 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 83  tctcctgtgcttgcctcttccattcctgctgcta 116
           |||||||||| |||||||||||||||||||||||
Sbjct: 99  tctcctgtgcctgcctcttccattcctgctgcta 132




>42833_zma-MIR528b:mirbase
          Length = 78

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 20 gtggaaggggcatgcagaggagca 43
          ||||||||||||||||||||||||
Sbjct: 1  gtggaaggggcatgcagaggagca 24



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 82  ctctcctgtgcttgcctcttccatt 106
           ||||||||||| |||||||||||||
Sbjct: 54  ctctcctgtgcctgcctcttccatt 78




>42623_sbi-MIR528:mirbase
          Length = 84

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tggaaggggcatgcagaggagca 43
          |||||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggagca 23



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 82  ctctcctgtgcttgcctcttccatt 106
           ||||||||||| |||||||||||||
Sbjct: 60  ctctcctgtgcctgcctcttccatt 84




>42481_ssp-MIR528:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tggaaggggcatgcagaggagca 43
          |||||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggagca 23




>42832_zma-MIR528a:mirbase
          Length = 123

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 gtggaaggggcatgcagaggag 41
          ||||||||||||||||||||||
Sbjct: 1  gtggaaggggcatgcagaggag 22



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 82  ctctcctgtgcttgcctcttccatt 106
           ||||||||||| |||||||||||||
Sbjct: 99  ctctcctgtgcctgcctcttccatt 123