miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01062;MIR812;AACV01004111.1/19435-19261 39947:Oryza sativa
Japonica Group
Length = 175
Score = 252 bits (127), Expect = 2e-66
Identities = 159/175 (90%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaattttttttaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaata 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaata 120
Query: 159 caaatcatnnnnnnnntttaaataagacggacggctaattgttggagatagaaac 213
|||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaatcataaaaaaaatttaaataagacggacggctaattgttggagatagaaac 175
>RF01062;MIR812;AP008214.1/27600377-27600200 39947:Oryza sativa
Japonica Group
Length = 178
Score = 129 bits (65), Expect = 2e-29
Identities = 96/109 (88%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||||||||||||||||||||||||||||||||||| | ||||||| |||||
Sbjct: 4 tccgtgtccaacgtttgaccgtccgtcttatttgaaaaatttatgaaaattttaaaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 64 attagtcacacataaagtactattcatgttttatcatctaataacaata 112
>RF01062;MIR812;AACV01008044.1/10987-11152 39947:Oryza sativa
Japonica Group
Length = 166
Score = 121 bits (61), Expect = 5e-27
Identities = 99/113 (87%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaaaaattatgaaaaaaaattaa 60
Query: 99 aaa-ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||| |||||||| |||||||||| || |||||||||||||||||| |||||||
Sbjct: 61 aaagataagtcacgcataaagtattaatcatgttttatcatctaacaacaata 113
>RF01062;MIR812;AC069158.6/136626-136465 4530:Oryza sativa (rice)
Length = 162
Score = 115 bits (58), Expect = 3e-25
Identities = 97/111 (87%), Gaps = 7/111 (6%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaaaaattatgaa-------aaa 53
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| |||||||| |||||||||| || |||||||||||||||||| ||||||
Sbjct: 54 aatataagtcacgcataaagtattaatcatgttttatcatctaacaacaat 104
>RF01062;MIR812;AAAA02000365.1/28299-28472 39946:Oryza sativa Indica
Group
Length = 174
Score = 115 bits (58), Expect = 3e-25
Identities = 95/110 (86%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||| |||||||| |||||||||||||||| | ||||||| ||
Sbjct: 1 gtttccgtgtccaatgtttgaccatccgtcttatttgaaagatttatgaaacaattttaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaa 148
||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaattaagtcacacataaagtactattcatgttttatcatctaataacaa 110
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 51 aacgtttgaccgtccgtcttatttgaaa 78
||||||||||||||||||||||||||||
Sbjct: 162 aacgtttgaccgtccgtcttatttgaaa 135
>RF01062;MIR812;AP005558.3/35527-35699 39947:Oryza sativa Japonica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 94/109 (86%)
Strand = Plus / Plus
Query: 41 ttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaa 100
|||||||||||||||||||||||||||||||||| ||| ||||||||| ||||
Sbjct: 3 ttccgtgtccaacgtttgaccgtccgtcttatttaaaaaaattatgaaaaaaattgaaaa 62
Query: 101 aataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| |||||| |||||||||| || |||||||||||||||||| ||||||
Sbjct: 63 aacaagtcacgcataaagtattaatcatgttttatcatctaacaacaat 111
>RF01062;MIR812;AACV01008082.1/25543-25371 39947:Oryza sativa
Japonica Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 94/109 (86%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||||||||||||||||||||||||||||||||||| || |||||| |||||
Sbjct: 4 tccgtgtccaacgtttgaccgtccgtcttatttgaaaaaaatatgaaaaaattgaaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 64 attagtcccatataaagtactattcatgttttatcatctaataacaata 112
>RF01058;MIR806;AP004630.3/83094-82852 39947:Oryza sativa Japonica
Group
Length = 243
Score = 111 bits (56), Expect = 5e-24
Identities = 96/112 (85%)
Strand = Plus / Minus
Query: 38 ggtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnna 97
||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |
Sbjct: 209 ggttttcgtgtccaacgattgaccgtccgtcttatttgaaaaaattatgaaaaaaattaa 150
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
||| |||||||| |||||||||| || |||||||||||||||||| ||||||
Sbjct: 149 aaagataagtcacgcataaagtattaatcatgttttatcatctaacaacaat 98
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaa 78
|||||||| |||||||||||| ||||||||||| |||||
Sbjct: 38 tttccgtg-ccaacgtttgactgtccgtcttatatgaaa 75
>RF01058;MIR806;AACV01023222.1/20864-20622 39947:Oryza sativa
Japonica Group
Length = 243
Score = 111 bits (56), Expect = 5e-24
Identities = 96/112 (85%)
Strand = Plus / Minus
Query: 38 ggtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnna 97
|||||| |||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 209 ggtttctgtgtccaacgtttgaccgtccgtcttatttgaaaaaattatgaaaaaaattta 150
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
||| | |||||| |||||||||| || |||||||||||||||||| ||||||
Sbjct: 149 aaagacaagtcacgcataaagtattaatcatgttttatcatctaacaacaat 98
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 36 tgggtttccgtgtccaacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 33 tgggtttccgtgtccaacgtttgattgtccgtcttatatgaaa 75
>RF01058;MIR806;CR855021.1/38470-38230 4530:Oryza sativa (rice)
Length = 241
Score = 111 bits (56), Expect = 5e-24
Identities = 96/112 (85%)
Strand = Plus / Minus
Query: 38 ggtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnna 97
|||||||||||||||||||| |||||||||||||||||||| ||||||||| |
Sbjct: 208 ggtttccgtgtccaacgtttaaccgtccgtcttatttgaaaaaattatgaaaaaaattaa 149
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
||| |||| ||| |||||||||| || |||||||||||||||||| ||||||
Sbjct: 148 aaatataaatcacgcataaagtattaatcatgttttatcatctaacaacaat 97
>RF01062;MIR812;AAAA02017341.1/15356-15527 39946:Oryza sativa Indica
Group
Length = 172
Score = 109 bits (55), Expect = 2e-23
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
|||||||||| |||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 2 tttccgtgtctaacgtttgaccgtccgtcttatttgaaaaaattatgaaaaaaatttaaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaa 142
| |||||||| |||||||||| || ||||||||||||||||||
Sbjct: 62 agataagtcacgcataaagtattaatcatgttttatcatctaa 104
>RF01062;MIR812;AC123897.3/101395-101565 39947:Oryza sativa Japonica
Group
Length = 171
Score = 107 bits (54), Expect = 8e-23
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaaaaattatgaaaaaaattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaa 148
|| | |||||| |||||||||| || ||||||||||||||| || |||||
Sbjct: 61 aagacaagtcacgcataaagtattaatcatgttttatcatccaacaacaa 110
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttat 72
||||||||||||||||||| || |||||||||||
Sbjct: 171 gtttccgtgtccaacgtttaactgtccgtcttat 138
>RF01062;MIR812;AC116604.1/20583-20755 39947:Oryza sativa Japonica
Group
Length = 173
Score = 107 bits (54), Expect = 8e-23
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
|||||||||||||||||||||||| |||||||||| ||| ||||||||| |||
Sbjct: 2 tttccgtgtccaacgtttgaccgttcgtcttatttaaaaaaattatgaaaaaaattaaaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
| |||||||| ||||||||||||| |||| ||||||||||||| ||||||
Sbjct: 62 agataagtcacgcataaagtactaatcatattttatcatctaacaacaat 111
>RF01062;MIR812;AP003054.2/131935-131763 39947:Oryza sativa Japonica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 108/128 (84%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||| |||||||||||| |||| |||||||||||| | ||||||| ||
Sbjct: 1 gtttccgtgcccaacgtttgactgtccatcttatttgaaaaatttatgaaaaaaattgaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaata 158
|| ||||||| |||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 61 aagttaagtcacgcataaagtactattcatattttatcatctaataaca--ataaaaata 118
Query: 159 caaatcat 166
| ||||||
Sbjct: 119 ctaatcat 126
>RF01062;MIR812;AP005741.3/59732-59924 39947:Oryza sativa Japonica
Group
Length = 193
Score = 105 bits (53), Expect = 3e-22
Identities = 95/110 (86%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 41 ttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaa 100
||||||||||||||||||| |||||||||||||||||| | |||| || ||||
Sbjct: 3 ttccgtgtccaacgtttgatcgtccgtcttatttgaaaaacttataaaaaatta--aaaa 60
Query: 101 aataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||| ||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 61 aataagtcatgcataaagtactatttatgttctatcatctaataacaata 110
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttattt 74
|||||||||||||||||||||| || ||| ||||||
Sbjct: 193 gtttccgtgtccaacgtttgactgttcgttttattt 158
>RF01062;MIR812;AP008210.1/34581048-34581220 39947:Oryza sativa
Japonica Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
|||||||| |||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 4 tccgtgtctaacgtttgaccgtccgtcttatttgaaaattttatgaaaaaattaaaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gttagtcacacataaagtactattcatgttttatcatctaataacaata 112
>RF01062;MIR812;AAAA02002869.1/4145-4316 39946:Oryza sativa Indica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaaaaattatgaataagattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|| ||||||| |||||||||| || |||| |||||||||||||
Sbjct: 61 aagataagtcgcgcataaagtattaatcatattttatcatctaa 104
>RF01062;MIR812;AAAA02030068.1/20717-20889 39946:Oryza sativa Indica
Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||| |||| |||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1 gtttccatgtctaacgtttgaccgtccgtcttatttgaaaaaattatgaaaaaattttaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
||||||||||| ||||||| || ||||||| |||||||||||||
Sbjct: 61 aaaataagtcatgcataaaatattattcatattttatcatctaa 104
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaa 77
|||| ||||||||| |||||||||||||||||| ||||
Sbjct: 172 tttctgtgtccaacatttgaccgtccgtcttatatgaa 135
>RF01062;MIR812;AAAA02034277.1/2944-2773 39946:Oryza sativa Indica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||| ||||||||||||||||||||||||||||||| |||||| || |||||
Sbjct: 4 tccgtatccaacgtttgaccgtccgtcttatttgaaagaattataaaagaaattaaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|||||||| ||||||| || || |||||||||||||||||| ||||||
Sbjct: 64 ataagtcatgcataaaatattaatcatgttttatcatctaacaacaat 111
>RF01062;MIR812;AP008214.1/4739414-4739243 39947:Oryza sativa
Japonica Group
Length = 172
Score = 101 bits (51), Expect = 5e-21
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||||||||||||| ||| |||||| || ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatttaaaaaaattataaaaaaaattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|||| |||||| |||||||| | || ||||| |||||||||||||||||||
Sbjct: 61 aaaacaagtcacgcataaagcattaatcatgatttatcatctaataacaat 111
>RF01062;MIR812;AC210446.1/8401-8573 4538:Oryza glaberrima (African
rice)
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
||||||||||||| ||||||||||||||||||||||||| ||| ||||| |||
Sbjct: 2 tttccgtgtccaatgtttgaccgtccgtcttatttgaaaaaataatgaaaaaaattaaaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
| | |||||| ||| ||||||||| |||||||||||||||||| |||||||
Sbjct: 62 agagaagtcacgcacaaagtactaatcatgttttatcatctaacaacaata 112
>RF01062;MIR812;AACV01009994.1/18616-18451 39947:Oryza sativa
Japonica Group
Length = 166
Score = 101 bits (51), Expect = 5e-21
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||| ||||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtctgtcttatttgaaaaaattatgaaaaaaattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| | |||||| ||||||| || || |||||||||||||||||| ||||||
Sbjct: 61 aagacaagtcacgcataaaatattaatcatgttttatcatctaacaacaat 111
>RF01062;MIR812;AC145272.2/139699-139871 39947:Oryza sativa Japonica
Group
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 85/99 (85%)
Strand = Plus / Plus
Query: 51 aacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtcag 110
||||||||||||| |||||||||||||| |||||||| |||||||||||||
Sbjct: 13 aacgtttgaccgttcgtcttatttgaaaaaattatgattgtttttaaaaaaataagtcat 72
Query: 111 gcataaagtactattcatgttttatcatctaataacaat 149
||||||| |||||||||| ||||||||||||||||||||
Sbjct: 73 gcataaactactattcatattttatcatctaataacaat 111
>RF01062;MIR812;CR855160.1/12972-13144 4530:Oryza sativa (rice)
Length = 173
Score = 101 bits (51), Expect = 5e-21
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
||||||||| ||||||||| ||||| ||||||||||||| ||||||||| |||
Sbjct: 2 tttccgtgtacaacgtttgcccgtcggtcttatttgaaaaaattatgaaaaaaattaaaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
| |||||||| |||||||||| || |||||||||||||||||| |||||||
Sbjct: 62 agataagtcacgcataaagtattaatcatgttttatcatctaacaacaata 112
>RF01062;MIR812;ABRL01000506.1/17407-17249 65489:Oryza barthii
Length = 159
Score = 97.6 bits (49), Expect = 7e-20
Identities = 96/113 (84%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||| |||||||||||||||||| |||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtatccaacgtttgaccgtccatcttatttgaaaaaattatgaaaaaaaattaa 60
Query: 99 aaa-ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||| ||||||| |||||||||| || |||||||||||||||||| |||||||
Sbjct: 61 aaaggtaagtcacgcataaagtattaatcatgttttatcatctaacaacaata 113
>RF01062;MIR812;AACV01009184.1/9617-9446 39947:Oryza sativa Japonica
Group
Length = 172
Score = 97.6 bits (49), Expect = 7e-20
Identities = 98/117 (83%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
|||||||| |||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 2 tttccgtgcccaacgtttgaccgtccgtcttatttgaaaaaattatgaaaaaattgtaaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaa 156
| |||||| |||||| |||||||||| ||||| ||||||||||||||| |||||
Sbjct: 62 agttaagtctcacataaattactattcatattttaccatctaataacaataaaaaaa 118
>RF01062;MIR812;AACV01007749.1/2820-2990 39947:Oryza sativa Japonica
Group
Length = 171
Score = 97.6 bits (49), Expect = 7e-20
Identities = 93/109 (85%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
|||||||||||| ||||||||| |||||||||||||| | ||||||| |||||
Sbjct: 4 tccgtgtccaacatttgaccgttcgtcttatttgaaaaatttatgaattttttttaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||| |||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 64 ata-gtcacacataaagtactatttatgttttatcatctaataacaata 111
>RF01062;MIR812;AC135924.2/59519-59692 39947:Oryza sativa Japonica
Group
Length = 174
Score = 97.6 bits (49), Expect = 7e-20
Identities = 96/113 (84%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatg-aannnnnnnna 97
||||||||| |||||||||||||||||||||||||||||| ||||||| || |
Sbjct: 1 gtttccgtgcccaacgtttgaccgtccgtcttatttgaaaaaattatgaaaaaaattaaa 60
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||| |||||| ||| |||||| || |||||||||||||||||| |||||||
Sbjct: 61 aaaaacaagtcacgcacaaagtattaatcatgttttatcatctaacaacaata 113
>RF01062;MIR812;AAAA02003990.1/25355-25184 39946:Oryza sativa Indica
Group
Length = 172
Score = 97.6 bits (49), Expect = 7e-20
Identities = 96/112 (85%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 55 tttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtcaggcat 114
|||||||||||||||||||||||| ||||||||| ||||||||| ||| |||
Sbjct: 18 tttgaccgtccgtcttatttgaaaaaattatgaaaaaattaaaaaaaataa-tcacacat 76
Query: 115 aaagtactattcatgttttatcatctaataacaatataaaaatacaaatcat 166
|||||||||||||||||||||||| |||||||| |||||||||| ||||||
Sbjct: 77 aaagtactattcatgttttatcatgtaataaca--ataaaaatactaatcat 126
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 46 tgtccaacgtttgaccgtccgtcttatttgaaa 78
|||| ||||||||||||| ||||||||||||||
Sbjct: 165 tgtctaacgtttgaccgttcgtcttatttgaaa 133
>RF01062;MIR812;AACV01016751.1/1577-1419 39947:Oryza sativa Japonica
Group
Length = 159
Score = 97.6 bits (49), Expect = 7e-20
Identities = 92/109 (84%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||||||||||||||||||||||||||||||||||| | |||||| |||||
Sbjct: 4 tccgtgtccaacgtttgaccgtccgtcttatttgaaaaatttatgagaaaattaaaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
| ||||| |||||||||||||| |||||||||||| |||||||||||
Sbjct: 64 gttagtcacacataaagtactatttatgttttatcatataataacaata 112
>RF01062;MIR812;AAAA02020957.1/2475-2646 39946:Oryza sativa Indica
Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 89/104 (85%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
||||||||||||||||||||||||||||||||||| ||| |||||| || |||
Sbjct: 2 tttccgtgtccaacgtttgaccgtccgtcttattttaaaaaattataaaaaataattaaa 61
Query: 100 aa-ataagtcaggcataaagtactattcatgttttatcatctaa 142
|| |||||||| |||||||||| || ||||||||||||||||||
Sbjct: 62 aagataagtcacgcataaagtattaatcatgttttatcatctaa 105
>RF01062;MIR812;AAAA02037624.1/5275-5103 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 3e-19
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 47 gtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataag 106
||||||||||||||||||| |||||||| ||| | |||| || ||||||| ||
Sbjct: 9 gtccaacgtttgaccgtccatcttatttaaaaaatttataaaaaaaattaaaaaaattag 68
Query: 107 tcaggcataaagtactattcatgttttatcatctaataacaata 150
||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 69 tcaagcataaagcactattcatgttttatcatctaataacaata 112
>RF01062;MIR812;AP005317.3/115203-115374 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||||| |||||||||| || ||| |||||||||| ||||||||| ||
Sbjct: 1 gtttccgtgtctaacgtttgactgttcgttttatttgaaaaaattatgaaaaaaattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|| |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 61 aagataagtcatgcataaagtattattcatgttttatcatctaa 104
>RF01062;MIR812;AP008213.1/13703145-13703316 39947:Oryza sativa
Japonica Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 94/112 (83%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||| |||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtacccaacgtttgaccgtccgtcttatttgaaaaaattatgaaaaagtttcaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| ||||||| | |||||||| |||| || |||||||||||||||||||||
Sbjct: 61 aagttaagtcacgtataaagtagtatttatattttatcatctaataacaata 112
>RF01062;MIR812;AP008207.1/20228121-20227949 39947:Oryza sativa
Japonica Group
Length = 173
Score = 95.6 bits (48), Expect = 3e-19
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||||||||||||||| |||||||||||||||||| || |||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgatcgtccgtcttatttgaaaaaaatatgaaaaaaattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|| |||||||| ||||||| || || ||||||||||||||||||
Sbjct: 61 aagataagtcacgcataaaatattaatcatgttttatcatctaa 104
>RF01062;MIR812;AAAA02028052.1/7218-7389 39946:Oryza sativa Indica
Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 95/112 (84%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||| |||||||||||||||||||||||||||||||| | ||||||| ||
Sbjct: 1 gtttctgtgtccaacgtttgaccgtccgtcttatttgataagtttatgaaaaaataaaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||||| |||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 aaaata-gtcacacataaagtattattcatgttttatcatctaataacaata 111
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 46 tgtccaacgtttgaccgtccgtcttatttgaaa 78
|||||||||||| ||||||||||||||||||||
Sbjct: 165 tgtccaacgtttaaccgtccgtcttatttgaaa 133
>RF01062;MIR812;AP004886.3/56394-56566 39947:Oryza sativa Japonica
Group
Length = 173
Score = 93.7 bits (47), Expect = 1e-18
Identities = 96/114 (84%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttg--aaacaattatgaannnnnnnn 96
||||||||||||||||||||||||||||||||||||| ||| |||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaaaaaaattataaaaataatta 60
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| ||||||| |||||||||| || |||||||||||||||||| |||||||
Sbjct: 61 aaaagataagtcgcgcataaagtattaatcatgttttatcatctaacaacaata 114
>RF01062;MIR812;AP008207.1/33291462-33291623 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 1e-18
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatat 151
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 aaaatataagtcacgcataaagtactattcatgttttatcatctaataacaatat 110
>RF01062;MIR812;AP005163.3/84135-84299 39947:Oryza sativa Japonica
Group
Length = 165
Score = 93.7 bits (47), Expect = 1e-18
Identities = 104/123 (84%), Gaps = 10/123 (8%)
Strand = Plus / Plus
Query: 44 cgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaat 103
||||| |||||||||| |||||||||||||||||| | |||||| |||||||
Sbjct: 6 cgtgttcaacgtttgatcgtccgtcttatttgaaaaatatatgaa--------aaaaaat 57
Query: 104 aagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaatacaaat 163
|||||| ||||||||| |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 58 tagtcagacataaagtaatattcatgttttatcatctaataaca--ataaaaatactaat 115
Query: 164 cat 166
|||
Sbjct: 116 cat 118
>RF01062;MIR812;ABRL01000748.1/10750-10922 65489:Oryza barthii
Length = 173
Score = 93.7 bits (47), Expect = 1e-18
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtgttcaacgtttgactgtccgtcttatttgaaaaaattatgaaaaatattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| |||||| |||||||||| || |||||||||||||||||| ||||||
Sbjct: 61 aaggcaagtcacgcataaagtattaatcatgttttatcatctaacaacaat 111
>RF01062;MIR812;AAAA02021140.1/2062-2233 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 1e-18
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||| ||||||||||||| |||| |||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtatccaacgtttgactgtccatcttatttgaaagaattatgaaaaaaaataaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| |||||||| ||||||| || || |||||||||||||||||| ||||||
Sbjct: 61 aagataagtcacgcataaaatattaatcatgttttatcatctaaaaacaat 111
>RF01062;MIR812;AAAA02006980.1/48610-48439 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 1e-18
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
||||||||||||||||||||||||||||||| ||||||| ||||||||| ||
Sbjct: 2 tttccgtgtccaacgtttgaccgtccgtcttgtttgaaaaaattatgaaaaaaattagaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaa 142
| |||||| | |||||||||| || ||||||||||||||||||
Sbjct: 62 agataagttacgcataaagtattaatcatgttttatcatctaa 104
>RF01062;MIR812;AACV01022718.1/12342-12516 39947:Oryza sativa
Japonica Group
Length = 175
Score = 93.7 bits (47), Expect = 1e-18
Identities = 86/100 (86%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 55 tttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtcaggcat 114
||||||| |||||||||||||||| | ||||||| |||||| |||| | ||||
Sbjct: 21 tttgaccatccgtcttatttgaaaaatttatgaaaaaaat--aaaaaaaaagttatgcat 78
Query: 115 aaagtactattcatgttttatcatctaataacaatataaa 154
||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 aaagtactattcatgttttatcatctaataacaatataaa 118
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaa 78
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 175 gtttctgtgtccaacgtttgaccgtccgtcttatttgaaa 136
>RF01062;MIR812;AP008211.1/18545302-18545131 39947:Oryza sativa
Japonica Group
Length = 172
Score = 93.7 bits (47), Expect = 1e-18
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||||||||| ||||||||| |||||||||||||| || |||||| ||
Sbjct: 1 gtttccgtgtccaacatttgaccgttcgtcttatttgaaaaaaatatgaaaaaaattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatcta 141
|| |||||||| |||||||||| || |||||||||||||||||
Sbjct: 61 aagataagtcatgcataaagtattaatcatgttttatcatcta 103
>RF01062;MIR812;AP008218.1/14895548-14895379 39947:Oryza sativa
Japonica Group
Length = 170
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/70 (92%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaa 156
||||||||||||| ||||||||||||||| ||||||||||| ||||||||| |||||||
Sbjct: 57 aaaaaataagtcacgcataaagtactatttatgttttatcacctaataaca--ataaaaa 114
Query: 157 tacaaatcat 166
||||||||||
Sbjct: 115 tacaaatcat 124
>RF01062;MIR812;AC068950.11/131301-131469 39947:Oryza sativa
Japonica Group
Length = 169
Score = 93.7 bits (47), Expect = 1e-18
Identities = 88/103 (85%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
|||||||| |||||||||||||||||||||||||||||| |||||| || |||
Sbjct: 2 tttccgtgcccaacgtttgaccgtccgtcttatttgaaaaaattat-aaaaaaattaaaa 60
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaa 142
| |||||||| |||||||||| || ||||||||||||||||||
Sbjct: 61 agataagtcatgcataaagtattaatcatgttttatcatctaa 103
>RF01058;MIR806;AACV01000141.1/35700-35458 39947:Oryza sativa
Japonica Group
Length = 243
Score = 93.7 bits (47), Expect = 1e-18
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 36 tgggtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnn 95
||||||||||||||||||||||||||||||||| ||||| ||| || ||||||
Sbjct: 211 tgggtttccgtgtccaacgtttgaccgtccgtcctatttaaaaaaaatatgaaaaaaatt 152
Query: 96 naaaaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|||| |||||||| ||||||||| |||| ||||||||||||||||
Sbjct: 151 aaaaagataagtcacacataaagtattatttatgttttatcatctaa 105
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 36 tgggtttccgtgtccaacgtttgaccgtccgtcttatttgaa 77
||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 33 tgggtttccgtgtccaacgtttgactatccgtcttatatgaa 74
>RF01062;MIR812;AAAA02020382.1/15042-15213 39946:Oryza sativa Indica
Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
|||||||||| ||| |||||||||||||||||||||||| ||||||||| |||
Sbjct: 2 tttccgtgtctaacatttgaccgtccgtcttatttgaaaaaattatgaaaaaaattaaaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
| | |||||| ||||||| || || |||||||||||||||||| ||||||
Sbjct: 62 agacaagtcacgcataaaataataatcatgttttatcatctaacaacaat 111
>RF01062;MIR812;AACV01013047.1/1490-1661 39947:Oryza sativa Japonica
Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 104/125 (83%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||| ||||||||| ||||||||||||||||||||||||| || |||||| ||
Sbjct: 1 gttttcgtgtccaatgtttgaccgtccgtcttatttgaaaaaaatatgaaaaaaaattaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaata 158
|||| |||||| ||| |||||| || |||||||||||||||||| | || |||||||||
Sbjct: 61 aaaaaaagtcacgcacaaagtattaatcatgttttatcatctaacacca--ataaaaata 118
Query: 159 caaat 163
|||||
Sbjct: 119 caaat 123
>RF01062;MIR812;AAAA02030503.1/737-567 39946:Oryza sativa Indica
Group
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
|||||||||| ||||||||||||||| |||||||| ||| ||||||||| |||
Sbjct: 2 tttccgtgtctaacgtttgaccgtccatcttatttaaaaaaattatgaaaaaaattaaaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
| ||||| || |||||||||| || |||||||||||||||||| ||||||
Sbjct: 62 agataagccacgcataaagtattaatcatgttttatcatctaacaacaat 111
>RF01062;MIR812;AACV01009421.1/27858-27673 39947:Oryza sativa
Japonica Group
Length = 186
Score = 91.7 bits (46), Expect = 4e-18
Identities = 94/111 (84%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||| |||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtgcccaacgtttgaccgtccgtcttatttgaaaaaattatgaa--aaattaaa 58
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| | |||||| ||||||| || || |||||||||||||||||| ||||||
Sbjct: 59 aagacaagtcacgcataaaatattaatcatgttttatcatctaacaacaat 109
>RF01062;MIR812;AAAA02036402.1/899-1069 39946:Oryza sativa Indica
Group
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
||||||| |||||| ||||||||||| |||||||||||| ||||||||| |||
Sbjct: 2 tttccgtatccaacatttgaccgtccatcttatttgaaaaaattatgaaaagaattaaaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
| |||||||| |||||||||| || |||||||||||||||| | ||||||
Sbjct: 62 agataagtcacgcataaagtattaatcatgttttatcatctgacaacaat 111
>RF01062;MIR812;AC091302.5/14413-14235 39947:Oryza sativa Japonica
Group
Length = 179
Score = 91.7 bits (46), Expect = 4e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaa 88
|||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaaaaattatgaa 50
>RF01062;MIR812;AACV01018481.1/5092-5262 39947:Oryza sativa Japonica
Group
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 91/107 (85%), Gaps = 2/107 (1%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 4 tccgtgtccaacgtttgaccgtccgtcttatttgaaaaaattatgaa--aaaaacaaaaa 61
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaa 148
| |||| | ||||||||| ||||||| |||||||||||||| ||||
Sbjct: 62 aaaagtaacacataaagtattattcatattttatcatctaatgacaa 108
>RF01062;MIR812;AAAA02007137.1/6291-6459 39946:Oryza sativa Indica
Group
Length = 169
Score = 91.7 bits (46), Expect = 4e-18
Identities = 104/125 (83%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
|||||| ||||| |||||||||||||||||||| ||| ||||||||| ||| |
Sbjct: 4 tccgtgcccaacatttgaccgtccgtcttatttaaaaaaattatgaaaaatttaaaaata 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaatacaa 161
| |||||| ||||||||||||||||| ||||||||||||||| || |||||||||| |
Sbjct: 64 tttagtcagacataaagtactattcatattttatcatctaatagca--ataaaaatacta 121
Query: 162 atcat 166
|||||
Sbjct: 122 atcat 126
>RF01062;MIR812;AP005100.4/8478-8306 39947:Oryza sativa Japonica
Group
Length = 173
Score = 91.7 bits (46), Expect = 4e-18
Identities = 89/106 (83%)
Strand = Plus / Plus
Query: 45 gtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaata 104
|||||||||||||||||||||||||||||||||| | ||||||| |||||||
Sbjct: 7 gtgtccaacgtttgaccgtccgtcttatttgaaaaatttatgaaaaaaataaaaaaaatt 66
Query: 105 agtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||| |||||| |||||||||||||||||| | |||||| ||||
Sbjct: 67 agtcatacataaaatactattcatgttttatcttataataataata 112
>RF01062;MIR812;AACV01023281.1/4947-4778 39947:Oryza sativa Japonica
Group
Length = 170
Score = 91.7 bits (46), Expect = 4e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 57 aaaaaataagtcacgcataaagtactattcatgttttataatctaataacaata 110
>RF01062;MIR812;AP008218.1/23501710-23501883 39947:Oryza sativa
Japonica Group
Length = 174
Score = 91.7 bits (46), Expect = 4e-18
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||||||||| ||||||| ||||||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttgtttgaaaaaattatgaaaaaatttaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaa 148
|| |||||||| ||| | ||| || |||||||||||||||||| |||||
Sbjct: 61 aagataagtcacacatgaggtattaatcatgttttatcatctaacaacaa 110
>RF01058;MIR806;AAAA02002634.1/48844-49087 39946:Oryza sativa Indica
Group
Length = 244
Score = 91.7 bits (46), Expect = 4e-18
Identities = 98/117 (83%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 50 caacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtca 109
||||||||||||||||||||||||||||| | ||||||| ||| | | |||||
Sbjct: 199 caacgtttgaccgtccgtcttatttgaaaaatttatgaaaaaattaaaaatatttagtca 140
Query: 110 ggcataaagtactattcatgttttatcatctaataacaatataaaaatacaaatcat 166
||||||||||||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 139 cacataaagtactattcatgttttatcatctaatagca--ataaaaatactaatcat 85
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 aacgtttgaccgtccgtcttatttgaaa 78
||||||||||||||||||||||||||||
Sbjct: 49 aacgtttgaccgtccgtcttatttgaaa 76
>RF01058;MIR806;AP005310.3/20001-19760 39947:Oryza sativa Japonica
Group
Length = 242
Score = 91.7 bits (46), Expect = 4e-18
Identities = 86/102 (84%)
Strand = Plus / Minus
Query: 36 tgggtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnn 95
|||||||||||||||||| ||||||||||| |||||||||||| |||||||||
Sbjct: 210 tgggtttccgtgtccaacttttgaccgtccatcttatttgaaaaaattatgaaaaaaatt 151
Query: 96 naaaaaataagtcaggcataaagtactattcatgttttatca 137
|||| |||||||| ||||||||| || |||||||||||||
Sbjct: 150 aaaaagataagtcatacataaagtattaatcatgttttatca 109
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 36 tgggtttccgtgtccaacgtttgaccgtccgtcttatttgaaa 78
||||||||||||||||||||||||| ||| || |||| |||||
Sbjct: 32 tgggtttccgtgtccaacgtttgactgtctgttttatatgaaa 74
>RF01062;MIR812;AAAA02031932.1/28926-28765 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 2e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 48 aaaaaataagtcgggcataaaatactattcatgttttatcatctaataacaat 100
>RF01062;MIR812;AP008213.1/6398072-6397898 39947:Oryza sativa
Japonica Group
Length = 175
Score = 89.7 bits (45), Expect = 2e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 63 aaaaataagtcacgcataaagtactattcatattttatcatctaataacaata 115
>RF01062;MIR812;ABRL01001958.1/15569-15396 65489:Oryza barthii
Length = 174
Score = 89.7 bits (45), Expect = 2e-17
Identities = 92/109 (84%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatg-aannnnnnnnaaaa 100
||||| ||||||||||||||||||||||||||||||| | ||||| || ||||
Sbjct: 4 tccgtatccaacgtttgaccgtccgtcttatttgaaaaatttatgaaaattttaaaaaaa 63
Query: 101 aataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 64 aattagccatacataaagttctattcatgttttatcatctaataacaat 112
>RF01062;MIR812;AAAA02020594.1/5764-5601 39946:Oryza sativa Indica
Group
Length = 164
Score = 89.7 bits (45), Expect = 2e-17
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 55 tttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtcaggcat 114
||||||| |||||||||||||||| | |||| || ||||||| ||||| |||
Sbjct: 12 tttgaccatccgtcttatttgaaaaatttataaaaaatattaaaaaaattagtcacacat 71
Query: 115 aaagtactattcatgttttatcatctaataacaatataaaaatacaaatcat 166
||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 72 aaagtactattcatgttttatcatctaataaca--ataaaaatactaatcat 121
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 53 cgtttgaccgtccgtcttatttgaaa 78
||||||||||| ||||||||||||||
Sbjct: 154 cgtttgaccgttcgtcttatttgaaa 129
>RF01062;MIR812;AAAA02026920.1/22562-22391 39946:Oryza sativa Indica
Group
Length = 172
Score = 89.7 bits (45), Expect = 2e-17
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 50 caacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtca 109
|||||||||||||| ||||||||||||| | ||||||| ||||| |||||
Sbjct: 11 caacgtttgaccgtttgtcttatttgaaaaatttatgaaaaaaatttaaaaatgtagtca 70
Query: 110 ggcataaagtactattcatgttttatcatctaataacaata 150
||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 agcataaagtactattcatgttttatcatctaataacaata 111
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 46 tgtccaacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||||||| |||||||||||||
Sbjct: 165 tgtccaacgtttgaccgtttgtcttatttgaaa 133
>RF01062;MIR812;AC135398.2/68370-68199 39947:Oryza sativa Japonica
Group
Length = 172
Score = 89.7 bits (45), Expect = 2e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 60 aaaaaataagtcaggcataaattactattcatgttttatcatctagtaacaat 112
>RF01062;MIR812;AAAA02014397.1/14648-14476 39946:Oryza sativa Indica
Group
Length = 173
Score = 89.7 bits (45), Expect = 2e-17
Identities = 91/109 (83%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||||||||||||||||||||||||||||||| ||| | ||||||| |||||
Sbjct: 4 tccgtgtccaacgtttgaccgtccgtcttatttaaaaaatttatgaaaaaattaaaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
| ||||| | |||||||||||||||||||||||||||| ||| ||||
Sbjct: 64 aatagtcacacgtaaagtactattcatgttttatcatctagtaaaaata 112
>RF01062;MIR812;AACV01019971.1/2544-2716 39947:Oryza sativa Japonica
Group
Length = 173
Score = 89.7 bits (45), Expect = 2e-17
Identities = 106/128 (82%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||| ||||||||||||| ||| ||||||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgactgtccgtcttatttaaaaaaattatgaaaaaatttaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaata 158
| |||| ||| ||||||||| || |||||||||||||||||| |||| |||||||||
Sbjct: 61 agtataattcacacataaagtattaatcatgttttatcatctaacaaca--ataaaaata 118
Query: 159 caaatcat 166
| ||||||
Sbjct: 119 ctaatcat 126
>RF01062;MIR812;AAAA02007919.1/32-200 39946:Oryza sativa Indica
Group
Length = 169
Score = 89.7 bits (45), Expect = 2e-17
Identities = 93/110 (84%), Gaps = 4/110 (3%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
||||| |||||||||||| || ||||||||||||||||| ||||||||| | |
Sbjct: 2 tttccatgtccaacgtttaactgtccgtcttatttgaaaaaattatgaaaata----ata 57
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
| |||||||| |||||||||| || |||||||||||||||||||||||||
Sbjct: 58 agataagtcacgcataaagtattaatcatgttttatcatctaataacaat 107
>RF01062;MIR812;AP008216.1/1661314-1661486 39947:Oryza sativa
Japonica Group
Length = 173
Score = 89.7 bits (45), Expect = 2e-17
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 55 tttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtcaggcat 114
||||||| | |||||||||||| | ||||||||| ||||| ||||||| ||||
Sbjct: 17 tttgaccattcgtcttatttgataaaattatgaaaaaattttaaaaattaagtcatgcat 76
Query: 115 aaagtactattcatgttttatcatctaataacaatataaaaatacaaatcat 166
|||||||||||||| |||||||||||||||||| |||||||||| ||||||
Sbjct: 77 aaagtactattcatattttatcatctaataaca--ataaaaatactaatcat 126
>RF01062;MIR812;AAAA02013629.1/14001-14173 39946:Oryza sativa Indica
Group
Length = 173
Score = 89.7 bits (45), Expect = 2e-17
Identities = 91/109 (83%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||| |||||||||||||| || ||||||||||||| | |||| || |||||
Sbjct: 4 tccgtatccaacgtttgaccatctgtcttatttgaaaaatttataaaaaattttaaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 64 attagtcacacataaagtactattcatattttatcatctaataacaata 112
>RF01062;MIR812;AP008213.1/27685317-27685488 39947:Oryza sativa
Japonica Group
Length = 172
Score = 89.7 bits (45), Expect = 2e-17
Identities = 92/109 (84%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
|||||||||||||||||| |||||||||||||| ||| | |||| || |||||
Sbjct: 4 tccgtgtccaacgtttgatcgtccgtcttatttaaaatatttataaaaaaaattaaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||| |||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 64 ata-gtcacacataaagtactattcatgttttatcatttaataacaata 111
>RF01062;MIR812;AACV01025322.1/4953-5124 39947:Oryza sativa Japonica
Group
Length = 172
Score = 89.7 bits (45), Expect = 2e-17
Identities = 107/128 (83%), Gaps = 3/128 (2%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||||||||||||||||||| |||||||||||||| |||||| || ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgttcgtcttatttgaaaaaattataaaaaattttaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaata 158
|| |||||||| | |||||||| |||| |||||||||||| ||| |||| |||||||||
Sbjct: 61 aagataagtcatgtataaagtattatttatgttttatcat-taacaaca--ataaaaata 117
Query: 159 caaatcat 166
| ||||||
Sbjct: 118 ctaatcat 125
>RF01062;MIR812;AY946549.1/36-208 4530:Oryza sativa (rice)
Length = 173
Score = 89.7 bits (45), Expect = 2e-17
Identities = 91/109 (83%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
|||||||||||| |||||| |||||||||||| ||| | ||||||| |||||
Sbjct: 4 tccgtgtccaacatttgactatccgtcttatttaaaaaatttatgaaaaattttaaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| ||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 64 attagtcacacataaaatactattcatgttttatcatctaataacaata 112
>RF01062;MIR812;AC137070.2/86863-86692 39947:Oryza sativa Japonica
Group
Length = 172
Score = 89.7 bits (45), Expect = 2e-17
Identities = 92/109 (84%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||||||||||||||||||||||||||||||| ||| | ||| || |||||
Sbjct: 4 tccgtgtccaacgtttgaccgtccgtcttatttaaaaaatttaacaattttttttaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||| |||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 64 ata-gtcacacataaagtattattcatgttttatcatctaataacaata 111
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa Japonica
Group
Length = 245
Score = 89.7 bits (45), Expect = 2e-17
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 50 caacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtca 109
||||||||||||||||||||||||||||| | ||||||| ||| | | |||||
Sbjct: 198 caacgtttgaccgtccgtcttatttgaaaaatttatgaaaaaattaaaaacatttagtca 139
Query: 110 ggcataaagtactattcatgttttatcatctaataacaata 150
||||||||||||||||||||||||||||||||| |||||
Sbjct: 138 cacataaagtactattcatgttttatcatctaatagcaata 98
Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 50 caacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||||||||||||||||||
Sbjct: 48 caacgtttgaccgtccgtcttatttgaaa 76
>RF01062;MIR812;AAAA02007524.1/33468-33642 39946:Oryza sativa Indica
Group
Length = 175
Score = 87.7 bits (44), Expect = 7e-17
Identities = 93/111 (83%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
|||||||||||||||||||| |||||||||||||||| | |||||| ||||
Sbjct: 4 tccgtgtccaacgtttgaccatccgtcttatttgaaaaatttatgattttttttttaaaa 63
Query: 102 ata--agtcaggcataaagtactattcatgttttatcatctaataacaata 150
| | ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aaactagtcacacataaagtactattcatgttttatcatctaataacaata 114
>RF01062;MIR812;AP008214.1/28361796-28361623 39947:Oryza sativa
Japonica Group
Length = 174
Score = 87.7 bits (44), Expect = 7e-17
Identities = 97/116 (83%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 44 cgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaat 103
|||||||||||||||| ||||||||||||| ||| | ||||||| ||||| |
Sbjct: 6 cgtgtccaacgtttgattgtccgtcttatttaaaaaatttatgaagaaattaaaaaaact 65
Query: 104 aagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaatac 159
||||| | ||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 66 tagtcacgtataaagtactattcatgttttattatctaataacaa-ataaaaatac 120
>RF01062;MIR812;AP005709.3/86155-85985 39947:Oryza sativa Japonica
Group
Length = 171
Score = 87.7 bits (44), Expect = 7e-17
Identities = 93/111 (83%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
|||| |||| ||||||||||||||||||||||||||||| | ||||||| |||
Sbjct: 2 tttctgtgttcaacgtttgaccgtccgtcttatttgaaaaatttatgaaaaatattaaaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| ||||| |||||||||| |||||||||||||||||||||||| ||||
Sbjct: 62 aag--agtcacgcataaagtaatattcatgttttatcatctaataataata 110
>RF01062;MIR812;AAAA02023967.1/6016-6181 39946:Oryza sativa Indica
Group
Length = 166
Score = 87.7 bits (44), Expect = 7e-17
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 45 gtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaata 104
||||||||||||||||||| | |||||||| || | ||||||| ||||| ||
Sbjct: 7 gtgtccaacgtttgaccgttcatcttatttacaaaatttatgaaaaaaaattaaaaagta 66
Query: 105 agtcaggcataaagtactattcatgttttatcatctaataacaa 148
||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 67 agtcacgcataaagtactattcatgttttattatctaataacaa 110
>RF01062;MIR812;AP008214.1/1874851-1875022 39947:Oryza sativa
Japonica Group
Length = 172
Score = 87.7 bits (44), Expect = 7e-17
Identities = 94/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||| |||||||| ||||| |||||||||| || |||||| ||
Sbjct: 1 gtttccgtgtccaa-gtttgaccatccgttttatttgaaaaaaatatgaaaaaaattaaa 59
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| |||||||| |||||||||| || ||||||||||||||||||||| ||||
Sbjct: 60 aagataagtcacgcataaagtattaatcatgttttatcatctaataataata 111
>RF01062;MIR812;AACV01019747.1/24938-24769 39947:Oryza sativa
Japonica Group
Length = 170
Score = 87.7 bits (44), Expect = 7e-17
Identities = 78/91 (85%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaatacaa 161
|||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| |
Sbjct: 62 ataagtcacgcataaagtactattcatgttttataatctaataaca--ataaaaatacta 119
Query: 162 atcatnnnnnnnntttaaataagacggacgg 192
||||| ||||||||||||||||||
Sbjct: 120 atcataaaataattttaaataagacggacgg 150
>RF01062;MIR812;AP008214.1/15379618-15379788 39947:Oryza sativa
Japonica Group
Length = 171
Score = 87.7 bits (44), Expect = 7e-17
Identities = 81/95 (85%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaa 156
|||| |||||||| |||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 58 aaaacataagtcacgcataaagtactattcatattttatcatctaataaca--ataaaaa 115
Query: 157 tacaaatcatnnnnnnnntttaaataagacggacg 191
||| |||||| |||||||||||||||||
Sbjct: 116 tactaatcataaaaaaattttaaataagacggacg 150
>RF01062;MIR812;AAAA02024544.1/2132-1963 39946:Oryza sativa Indica
Group
Length = 170
Score = 87.7 bits (44), Expect = 7e-17
Identities = 93/112 (83%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||
Sbjct: 1 gtttccatgtccaacgtttgaccgtccgtcttatttaaaaaaattatgaaaaaaattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| | |||||| | |||||||| || |||||||||||||| ||| |||||||
Sbjct: 61 aagacaagtcacgtataaagtattaatcatgttttatcatttaacaacaata 112
>RF01062;MIR812;AAAA02019534.1/621-791 39946:Oryza sativa Indica
Group
Length = 171
Score = 87.7 bits (44), Expect = 7e-17
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtgtccaatgtttgaccgtccgtcttatttgaaaaaattatgaaaaaaattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|| |||||||| | ||||| || || ||||||||||||||||||
Sbjct: 61 aagataagtcacgtataaaatatta-tcatgttttatcatctaa 103
>RF01062;MIR812;AACV01010788.1/18077-17904 39947:Oryza sativa
Japonica Group
Length = 174
Score = 87.7 bits (44), Expect = 7e-17
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||||| |||||||||||||||||||||||| ||| ||||||||| ||
Sbjct: 1 gtttccgtgtctaacgtttgaccgtccgtcttatttaaaaaaattatgaaaaaaaattaa 60
Query: 99 aaa-ataagtcaggcataaagtactattcatgttttatcatcta 141
||| | |||||| |||||||||| || |||||||||||||||||
Sbjct: 61 aaagacaagtcacgcataaagtattaatcatgttttatcatcta 104
>RF01062;MIR812;AACV01004704.1/18959-18788 39947:Oryza sativa
Japonica Group
Length = 172
Score = 87.7 bits (44), Expect = 7e-17
Identities = 91/108 (84%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 43 ccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaa 102
|||||||| ||||| |||||| |||||||||||||| | ||||||| ||||||
Sbjct: 5 ccgtgtccgacgtt-gaccgttcgtcttatttgaaaaatttatgaaaaatttgaaaaaaa 63
Query: 103 taagtcaggcataaagtactattcatgttttatcatctaataacaata 150
| ||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 64 ttagtcatacataaagtactattcatgttttatcatctaacaacaata 111
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaa 78
|||||||||| |||| |||||| |||||||||||||||||
Sbjct: 172 gtttccgtgttcaacttttgactgtccgtcttatttgaaa 133
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 87.7 bits (44), Expect = 7e-17
Identities = 115/143 (80%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 50 caacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtca 109
||||||||||||||||||||||||||||| | || |||| ||| | | |||||
Sbjct: 48 caacgtttgaccgtccgtcttatttgaaaaatttgtgaaaaaattaaaaacatttagtca 107
Query: 110 ggcataaagtactattcatgttttatcatctaataacaatataaaaatacaaatcatnnn 169
||||||||||||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 108 cacataaagtactattcatgttttatcatctaatagca--ataaaaatactaatcataaa 165
Query: 170 nnnnntttaaataagacggacgg 192
||||||||||||||||||
Sbjct: 166 aaatttttaaataagacggacgg 188
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 50 caacgtttgaccgtccgtcttattt 74
|||||||||||||||||||||||||
Sbjct: 198 caacgtttgaccgtccgtcttattt 174
>RF01062;MIR812;AAAA02021919.1/31168-31327 39946:Oryza sativa Indica
Group
Length = 160
Score = 85.7 bits (43), Expect = 3e-16
Identities = 94/111 (84%), Gaps = 4/111 (3%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
||||| ||| |||||||| |||||| |||||||||||||||||||| || ||
Sbjct: 2 tttccatgttcaacgtttcaccgtc-gtcttatttgaaacaattataaaaaattg---aa 57
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 58 aaaaaagtcatacataaagtactattcatgttttatcatctaataacaata 108
>RF01062;MIR812;AAAA02014103.1/13558-13387 39946:Oryza sativa Indica
Group
Length = 172
Score = 85.7 bits (43), Expect = 3e-16
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||||| ||| |||||||||||||||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtgtctaacatttgaccgtccgtcttatttgaaaaaattatgaa-aaaattaaa 59
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|| |||||||| |||||||||| | ||||||||||||||||||
Sbjct: 60 aagataagtcacgcataaagtatttatcatgttttatcatctaa 103
>RF01062;MIR812;AAAA02015875.1/7788-7616 39946:Oryza sativa Indica
Group
Length = 173
Score = 85.7 bits (43), Expect = 3e-16
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 48 tccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagt 107
|||||||||||||| || ||||||||| ||| ||||||||| ||||||| |||
Sbjct: 10 tccaacgtttgaccatctgtcttatttaaaaaaattatgaaaaaagtttaaaaaattagt 69
Query: 108 caggcataaagtactattcatgttttatcatctaataacaata 150
|| |||||||||||||| |||||||||||| |||||||||||
Sbjct: 70 cacacataaagtactatttatgttttatcatttaataacaata 112
>RF01062;MIR812;AP008215.1/15555127-15554959 39947:Oryza sativa
Japonica Group
Length = 169
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/70 (91%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaa 156
|||| |||||||| |||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 58 aaaacataagtcacgcataaagtactattcatattttatcatctaataaca--ataaaaa 115
Query: 157 tacaaatcat 166
||| ||||||
Sbjct: 116 tactaatcat 125
>RF01062;MIR812;AP008217.1/20259449-20259281 39947:Oryza sativa
Japonica Group
Length = 169
Score = 85.7 bits (43), Expect = 3e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaa 148
||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 57 aaaaaaaagtcatgcataaagtactattcatgttttatcatctaataacaa 107
>RF01062;MIR812;AP004646.3/3196-3367 39947:Oryza sativa Japonica
Group
Length = 172
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/70 (91%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaa 156
||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 aaaaaattagtcacacataaagtactattcatgttttatcatctaataaca--ataaaaa 116
Query: 157 tacaaatcat 166
||| ||||||
Sbjct: 117 tactaatcat 126
>RF01062;MIR812;AAAA02033906.1/8319-8486 39946:Oryza sativa Indica
Group
Length = 168
Score = 85.7 bits (43), Expect = 3e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaa 148
|||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 56 aaaaataagtcatgcataaagtactattaatgttttatcatctaataacaa 106
>RF01062;MIR812;AP002522.1/23327-23155 39947:Oryza sativa Japonica
Group
Length = 173
Score = 85.7 bits (43), Expect = 3e-16
Identities = 90/107 (84%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 44 cgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaat 103
||||||||||||||||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 6 cgtgtccaacgtttgaccgtccgtcttatttaaaaaaattatgaaaaaaatttaaaaaat 65
Query: 104 aagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||||| |||| ||||| || ||||||||||| ||| || |||||||
Sbjct: 66 aagtcacgcat-aagtattaatcatgttttattatcgaacaacaata 111
>RF01062;MIR812;AAAA02016278.1/9103-9277 39946:Oryza sativa Indica
Group
Length = 175
Score = 85.7 bits (43), Expect = 3e-16
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||| ||||||||||||||||||||||||||||| ||| ||||||| | ||
Sbjct: 1 gtttccatgtccaacgtttgaccgtccgtcttatttaaaaaaattatggaaaaattaaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
||| |||||| |||||||||| || |||||||||||||||| | ||||||
Sbjct: 61 aaacaaagtcacgcataaagtattaatcatgttttatcatctcacaacaat 111
>RF01062;MIR812;AP005925.3/14919-14762 39947:Oryza sativa Japonica
Group
Length = 158
Score = 85.7 bits (43), Expect = 3e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaa 148
|||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 44 aaaaataagtcacgcataaagtactattcatattttatcatctaataacaa 94
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttat 72
||||||||||||||| |||||| | |||||||||
Sbjct: 1 gtttccgtgtccaacatttgacagcccgtcttat 34
>RF01062;MIR812;AAAA02018710.1/11365-11199 39946:Oryza sativa Indica
Group
Length = 167
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/70 (91%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaa 156
|||| |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 56 aaaacataagtcacgcataaagtactattcatgttttatcatctattaaca--ataaaaa 113
Query: 157 tacaaatcat 166
||| ||||||
Sbjct: 114 tactaatcat 123
>RF01062;MIR812;AACV01000167.1/55780-55950 39947:Oryza sativa
Japonica Group
Length = 171
Score = 85.7 bits (43), Expect = 3e-16
Identities = 84/99 (84%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 44 cgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaat 103
|||||| ||| |||||||||||||||||||| ||| ||||||||| |||| ||
Sbjct: 6 cgtgtctaacatttgaccgtccgtcttatttaaaa-aattatgaaaaaatttaaaaagat 64
Query: 104 aagtcaggcataaagtactattcatgttttatcatctaa 142
|||||| |||||||||| |||||||||||||||||||||
Sbjct: 65 aagtcatgcataaagtattattcatgttttatcatctaa 103
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttat 72
|||| ||||| |||||||||||||||||||||||
Sbjct: 171 gttttcgtgtgcaacgtttgaccgtccgtcttat 138
>RF01062;MIR812;AP003569.3/83385-83559 39947:Oryza sativa Japonica
Group
Length = 175
Score = 85.7 bits (43), Expect = 3e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||| ||||||||||||||||||||||||||||| || ||| || ||
Sbjct: 1 gtttccgtgttcaacgtttgaccgtccgtcttatttgaaaaaaatat-aaaaaaattaaa 59
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| | |||||| |||||||||| || |||||||||||||||||| ||||||
Sbjct: 60 aagacaagtcatgcataaagtattaatcatgttttatcatctaacaacaat 110
>RF01062;MIR812;AP008209.1/33733368-33733199 39947:Oryza sativa
Japonica Group
Length = 170
Score = 85.7 bits (43), Expect = 3e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
|||||||||||||||||||||||| ||| |||||||||| ||||||||| |||
Sbjct: 2 tttccgtgtccaacgtttgaccgtgcgttttatttgaaaaaattatgaaaaaaaattaaa 61
Query: 100 aa-ataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| | |||||| ||||||| || || |||||||||||||||||| ||||||
Sbjct: 62 aagacaagtcatgcataaaatattaatcatgttttatcatctaacaacaat 112
>RF01062;MIR812;AACV01014069.1/867-697 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 1e-15
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaa 88
|||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 1 gtttccgtgtccaatgtttgaccgtccgtcttatttgaaaaaattatgaa 50
>RF01062;MIR812;AP008212.1/4136542-4136710 39947:Oryza sativa
Japonica Group
Length = 169
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 58 aaaacataagtcacgcataaagtactattcatattttatcatctaataacaata 111
>RF01062;MIR812;DQ280619.1/7388-7543 39946:Oryza sativa Indica Group
Length = 156
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 53 aaaaaattagtcacacataaagtactattcatgttttatcatctaataacaata 106
>RF01062;MIR812;AACV01004730.1/4325-4497 39947:Oryza sativa
Japonica Group
Length = 173
Score = 83.8 bits (42), Expect = 1e-15
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaa 88
|||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 gtttccgtgttcaacgtttgaccgtccgtcttatttgaaaaaattatgaa 50
>RF01062;MIR812;AACV01025587.1/2362-2533 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 48 tccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagt 107
||||||||||||||||||||||||||||||| ||| ||||| |||| ||||||
Sbjct: 8 tccaacgtttgaccgtccgtcttatttgaaaaaatcatgaaaaaaattaaaaagataagt 67
Query: 108 caggcataaagtactattcatgttttatcatctaataacaat 149
| ||||||| || || |||||||||||||||||| ||||||
Sbjct: 68 tacgcataaaatattaatcatgttttatcatctaacaacaat 109
>RF01062;MIR812;AAAA02019445.1/2141-1970 39946:Oryza sativa Indica
Group
Length = 172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaa 88
||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 gtttccgtgcccaacgtttgaccgtccgtcttatttgaaaaaattatgaa 50
>RF01062;MIR812;AP008211.1/13323828-13324000 39947:Oryza sativa
Japonica Group
Length = 173
Score = 83.8 bits (42), Expect = 1e-15
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaa 88
|||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 gttttcgtgtccaacgtttgaccgtccgtcttatttgaaaaaattatgaa 50
>RF01062;MIR812;AP003311.2/35147-34977 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 1e-15
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 45 gtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaata 104
|||||||||||||||| |||| |||| || ||| ||||||||| |||||||
Sbjct: 7 gtgtccaacgtttgactgtccatctttttaaaaaaaattatgaaagagtttttaaaaata 66
Query: 105 agtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||| ||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 67 agtcacgcataaaatactattcatgttttatcatctaataataata 112
>RF01062;MIR812;AL606622.3/117271-117099 39947:Oryza sativa Japonica
Group
Length = 173
Score = 83.8 bits (42), Expect = 1e-15
Identities = 103/125 (82%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||||||||||||||||||||||||||||||| ||| || |||||| |||||
Sbjct: 4 tccgtgtccaacgtttgaccgtccgtcttatttaaaaaaaatatgaaaatattttaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaatacaa 161
|| ||||| |||||| || ||||||| |||||||||| | ||||| |||||||||| |
Sbjct: 64 attagtcacacataaactattattcatattttatcatccactaaca--ataaaaatacca 121
Query: 162 atcat 166
|||||
Sbjct: 122 atcat 126
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 46 tgtccaacgtttgaccgtccgtcttattt 74
|||||||||||||||||| ||||||||||
Sbjct: 166 tgtccaacgtttgaccgttcgtcttattt 138
>RF01062;MIR812;AAAA02030899.1/50068-50243 39946:Oryza sativa Indica
Group
Length = 176
Score = 83.8 bits (42), Expect = 1e-15
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 105 agtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 70 agtcagacataaagtactattcatgttttatcatctaataacaata 115
>RF01062;MIR812;AP004698.3/118419-118581 39947:Oryza sativa Japonica
Group
Length = 163
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||||||| ||||||| | ||||||||||||||||||||||||||||||
Sbjct: 50 aaaaaataagtcacgcataaatttctattcatgttttatcatctaataacaata 103
>RF01062;MIR812;AP003747.5/95528-95357 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaa 88
|||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatttaaaaaaattatgaa 50
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaa 78
||||||||||||||| |||||| |||||||||| |||||
Sbjct: 172 gtttccgtgtccaacttttgactctccgtcttatatgaaa 133
>RF01062;MIR812;AC107314.1/58368-58197 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aaaacataagtcacacataaagtactattcatgttttatcatctaataacaata 113
>RF01062;MIR812;AAAA02022475.1/22256-22085 39946:Oryza sativa Indica
Group
Length = 172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 97/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 50 caacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtca 109
||||||||||||||||||||||||||||| | || |||| ||| | | |||||
Sbjct: 12 caacgtttgaccgtccgtcttatttgaaaaatttgtgaaaaatttgaaaacatttagtca 71
Query: 110 ggcataaagtactattcatgttttatcatctaataacaatataaaaatacaaatcat 166
||||||||||||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 72 cacataaagtactattcatgttttatcatctaatagca--ataaaaatactaatcat 126
>RF01062;MIR812;AACV01026889.1/4535-4695 39947:Oryza sativa Japonica
Group
Length = 161
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 49 aaaacataagtcacgcataaagtactatttatgttttatcatctaataacaata 102
>RF01062;MIR812;AACV01001852.1/15957-15785 39947:Oryza sativa
Japonica Group
Length = 173
Score = 83.8 bits (42), Expect = 1e-15
Identities = 104/125 (83%), Gaps = 3/125 (2%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||| ||||||||||||||||||||||||||||||| | ||||||| ||||
Sbjct: 4 tccgtatccaacgtttgaccgtccgtcttatttgaaaaatttatgaattttttattaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaatacaa 161
| |||||| | |||||||||||||| ||| ||||||||||||||| |||||||||| |
Sbjct: 64 a-aagtcacacgtaaagtactattcaggttctatcatctaataaca--ataaaaatacta 120
Query: 162 atcat 166
|||||
Sbjct: 121 atcat 125
>RF01062;MIR812;AACV01006539.1/16109-15936 39947:Oryza sativa
Japonica Group
Length = 174
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 aaaatataagtcacgcataaagtacaattcatgttttatcatctaataacaata 114
>RF01062;MIR812;AACV01021456.1/16145-15983 39947:Oryza sativa
Japonica Group
Length = 163
Score = 83.8 bits (42), Expect = 1e-15
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataac 146
|||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 56 aaaacataagtcacgcataaagtactattcatgttttatcatctaataac 105
>RF01062;MIR812;AP008207.1/7388120-7387948 39947:Oryza sativa
Japonica Group
Length = 173
Score = 83.8 bits (42), Expect = 1e-15
Identities = 89/106 (83%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 45 gtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaata 104
|||||||| | ||||||||||||||||||||||| | ||||||| |||||||
Sbjct: 7 gtgtccaatgcttgaccgtccgtcttatttgaaaaatttatgaattattttttaaaaata 66
Query: 105 agtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 67 -gtcacacataaagtactatttatgttttatcatctaataacaata 111
>RF01062;MIR812;AP002094.1/81339-81168 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 45 gtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaata 104
||||||||||||||||||||||| |||||| ||| |||| || |||||||
Sbjct: 7 gtgtccaacgtttgaccgtccgttttatttaaaataatttataaaaaaatttaaaaaatt 66
Query: 105 agtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 67 agtcacacataaagtattattcatgttttatcatctaataacaata 112
>RF01062;MIR812;AACV01022388.1/14766-14591 39947:Oryza sativa
Japonica Group
Length = 176
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaaaaattagtcacacataaagtactattcatgttttatcatctaataacaata 115
>RF01062;MIR812;AAAA02029602.1/30944-31105 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||| ||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 49 aaaaaataaatcacgcataaagtattattcatgttttatcatctaataacaata 102
>RF01062;MIR812;AACV01004255.1/9861-10031 39947:Oryza sativa
Japonica Group
Length = 171
Score = 83.8 bits (42), Expect = 1e-15
Identities = 105/125 (84%), Gaps = 4/125 (3%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
|||||||||||| ||||||||| |||||||||||||| | |||| || |||||
Sbjct: 4 tccgtgtccaacatttgaccgttcgtcttatttgaaaaatttat-aaaaaaattaaaaaa 62
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaatacaa 161
||| |||| |||||||||||||||||||||||||||||||||| | |||||||||| |
Sbjct: 63 ata-gtcacacataaagtactattcatgttttatcatctaataata--ataaaaatacta 119
Query: 162 atcat 166
|||||
Sbjct: 120 atcat 124
>RF01062;MIR812;AP005493.3/5146-5314 39947:Oryza sativa Japonica
Group
Length = 169
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 57 aaaacataagtcacacataaagtactattcatgttttatcatctaataacaata 110
>RF01062;MIR812;EU226785.1/3486-3661 39946:Oryza sativa Indica Group
Length = 176
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||||||| |||||||||| ||||||||||||||||||||||| |||||
Sbjct: 59 aaaaaataagtcacgcataaagtaatattcatgttttatcatctaatatcaata 112
>RF01062;MIR812;AAAA02006994.1/5327-5498 39946:Oryza sativa Indica
Group
Length = 172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 103/125 (82%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||||||||||||| ||||||| |||||||||||| |||||| || ||
Sbjct: 1 gtttccgtgtccaacgtttaaccgtccatcttatttgaaaaaattataaaaaaaattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaata 158
|| | |||||| |||||| || || |||||||||||||||||| |||| |||||||||
Sbjct: 61 aagacaagtcacacataaaatattaatcatgttttatcatctaacaaca--ataaaaata 118
Query: 159 caaat 163
|||||
Sbjct: 119 caaat 123
>RF01058;MIR806;AP004661.3/132951-132713 39947:Oryza sativa Japonica
Group
Length = 239
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aaaacataagtcacacataaagtactattcatgttttatcatctaataacaata 95
>RF01062;MIR812;AAAA02033190.1/4212-4355 39946:Oryza sativa Indica
Group
Length = 144
Score = 81.8 bits (41), Expect = 4e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||||||| ||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 45 aaaaataattcacgcataaagtactattcatgttttatcatctaataataata 97
>RF01062;MIR812;AC093953.2/91582-91415 39947:Oryza sativa Japonica
Group
Length = 168
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/64 (92%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 103 taagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaatacaaa 162
||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 62 taagtcacgcataaaatactattcatgttttatcatctaataaca--ataaaaatactaa 119
Query: 163 tcat 166
||||
Sbjct: 120 tcat 123
>RF01062;MIR812;AP004255.3/109178-109014 39947:Oryza sativa Japonica
Group
Length = 165
Score = 81.8 bits (41), Expect = 4e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||| ||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 57 aaaaaaaagtcagacataaagtactattcatgttttatcatctaataataata 109
>RF01062;MIR812;AACV01014398.1/6458-6286 39947:Oryza sativa Japonica
Group
Length = 173
Score = 81.8 bits (41), Expect = 4e-15
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
|||||||||||||| ||||||| | |||||||| ||| ||||||||| || ||
Sbjct: 4 tccgtgtccaacgtatgaccgtgcatcttatttaaaaaaattatgaaatttttttaataa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
| ||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 64 aatagtcacacataaagtgctattcatgttttatcatctaataacaata 112
>RF01062;MIR812;AACV01016342.1/16728-16560 39947:Oryza sativa
Japonica Group
Length = 169
Score = 81.8 bits (41), Expect = 4e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 59 aaaaataagtcatccataaagtattattcatgttttatcatctaataacaata 111
>RF01062;MIR812;AC112159.2/7868-7704 39947:Oryza sativa Japonica
Group
Length = 165
Score = 81.8 bits (41), Expect = 4e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 54 aaaaataagtcacacataaagtactatttatgttttatcatctaataacaata 106
>RF01062;MIR812;AP008207.1/38356600-38356430 39947:Oryza sativa
Japonica Group
Length = 171
Score = 81.8 bits (41), Expect = 4e-15
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 44 cgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaat 103
||||||||| ||||||||||||||||||||||||| |||||| || |||||
Sbjct: 6 cgtgtccaatgtttgaccgtccgtcttatttgaaaaaattatcaatttttttttaaaaaa 65
Query: 104 aagtcaggcataaagtactattcatgttttatcatctaataacaa 148
||||| |||||||||||||| ||||||||||||| ||||||||
Sbjct: 66 tagtcacacataaagtactatttatgttttatcatcgaataacaa 110
>RF01062;MIR812;AP008218.1/19177464-19177293 39947:Oryza sativa
Japonica Group
Length = 172
Score = 81.8 bits (41), Expect = 4e-15
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||| ||||| ||||||||||||||||||||||||||||| | |||||| ||
Sbjct: 1 gttttcgtgttcaacgtttgaccgtccgtcttatttgaaaaatttatgataaagttttaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataaca 147
||| ||||||| |||| ||||| |||||||||||||||||||| ||||
Sbjct: 61 aaattaagtcatgcatgaagtatcattcatgttttatcatctaacaaca 109
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 46 tgtccaacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||||||| ||||||||||||||
Sbjct: 165 tgtccaacgtttgaccgttcgtcttatttgaaa 133
>RF01062;MIR812;AC087797.5/112603-112434 4530:Oryza sativa (rice)
Length = 170
Score = 81.8 bits (41), Expect = 4e-15
Identities = 94/113 (83%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||||||||||||||||||| |||||||||||||| | |||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgttcgtcttatttgaaaataatatgaaaaaaaattaa 60
Query: 99 aaa-ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||| | |||||| | |||||||| || |||||||||||||||||| |||||||
Sbjct: 61 aaagacaagtcacgtataaagtattaatcatgttttatcatctaacaacaata 113
>RF01062;MIR812;AC093088.4/1764-1591 39947:Oryza sativa Japonica
Group
Length = 174
Score = 81.8 bits (41), Expect = 4e-15
Identities = 93/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 55 tttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtcaggcat 114
||||||| ||| |||||||| ||| ||||||||| ||||||| ||||| |||
Sbjct: 18 tttgaccatccatcttatttaaaaaaattatgaaaaatatttaaaaaattagtcacacat 77
Query: 115 aaagtactattcatgttttatcatctaataacaatataaaaatacaaatcat 166
||||||||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 78 aaagtactatttatgttttatcatctaataaca--ataaaaatactaatcat 127
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 46 tgtccaacgtttgaccgtccgtcttatttgaaa 78
||||||| |||||||||| ||||||||||||||
Sbjct: 167 tgtccaatgtttgaccgttcgtcttatttgaaa 135
>RF01062;MIR812;AC133778.4/73481-73322 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/68 (91%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaata 158
||||||||||| || ||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 50 aaaataagtcacgcgtaaagtactattcatattttatcatctaataaca--ataaaaata 107
Query: 159 caaatcat 166
| ||||||
Sbjct: 108 ctaatcat 115
>RF01062;MIR812;AAAA02015035.1/36629-36800 39946:Oryza sativa Indica
Group
Length = 172
Score = 81.8 bits (41), Expect = 4e-15
Identities = 93/110 (84%), Gaps = 3/110 (2%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgttt-gaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaa 100
|||||||||| ||||| ||| ||||||||||||||||| |||||| || ||||
Sbjct: 4 tccgtgtccagcgttttgactgtccgtcttatttgaaaaaattataaaaaaata--aaaa 61
Query: 101 aataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| ||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 62 tattagtcacgcataaagtactattcatgtattatcatctaataacaata 111
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 50 caacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||| ||||||||||||||
Sbjct: 161 caacgtttgaccgttcgtcttatttgaaa 133
>RF01058;MIR806;AAAA02018379.1/9883-10126 39946:Oryza sativa Indica
Group
Length = 244
Score = 81.8 bits (41), Expect = 4e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 36 tgggtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaa 88
||||||||||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 212 tgggtttccgtgtccaacgtttgaccgtccgtcttatatgataaaattatgaa 160
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 36 tgggtttccgtgtccaacgtttgaccgtccgtcttat 72
||||||||||||||||||||||||| |||||||||||
Sbjct: 33 tgggtttccgtgtccaacgtttgactgtccgtcttat 69
>RF01062;MIR812;AACV01021924.1/376-205 39947:Oryza sativa Japonica
Group
Length = 172
Score = 79.8 bits (40), Expect = 2e-14
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||| |||||||||||||||||||||| ||||||| ||| ||||||||| ||
Sbjct: 1 gtttctgtgtccaacgtttgaccgtccgacttatttaaaaaaattatgaaaaaaattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|| |||||||| ||||||| || || | ||||||||||||||||
Sbjct: 61 aagataagtcacgcataaaatattaattatgttttatcatctaa 104
>RF01062;MIR812;AACV01014850.1/52883-52712 39947:Oryza sativa
Japonica Group
Length = 172
Score = 79.8 bits (40), Expect = 2e-14
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||||||||||||| ||| |||||| || ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatttaaaaaaattataaaaataattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcat 138
|| |||||||| |||||||||| | ||| ||||||||||
Sbjct: 61 aagataagtcacgcataaagtattgatcaagttttatcat 100
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 47 gtccaacgtttgaccgtccgtcttat 72
|||||||||||||| |||||||||||
Sbjct: 164 gtccaacgtttgactgtccgtcttat 139
>RF01062;MIR812;AAAA02014743.1/21313-21484 39946:Oryza sativa Indica
Group
Length = 172
Score = 79.8 bits (40), Expect = 2e-14
Identities = 87/104 (83%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||| ||||||||| ||| |||||| || ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtctgtcttatttaaaaaaattat-aaaaaaaataaa 59
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|| | || ||| ||||||||||||| ||||||||||||||||||
Sbjct: 60 aagacaaatcacgcataaagtactaatcatgttttatcatctaa 103
>RF01062;MIR812;ABRL01001328.1/11165-11008 65489:Oryza barthii
Length = 158
Score = 79.8 bits (40), Expect = 2e-14
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||| |||||||||||||||||||||||||| ||| |||||| || ||
Sbjct: 1 gtttccgtgcccaacgtttgaccgtccgtcttatttaaaaaaattataaaaaaatttaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|| | |||||| ||||||| || || ||||||||||||||||||
Sbjct: 61 aagacaagtcacgcataaaatattaatcatgttttatcatctaa 104
>RF01062;MIR812;AAAA02003356.1/28581-28752 39946:Oryza sativa Indica
Group
Length = 172
Score = 79.8 bits (40), Expect = 2e-14
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||| ||||||||||||||||||||||||||| | | ||||||||| ||
Sbjct: 1 gtttccgtatccaacgtttgaccgtccgtcttatttaagaaaattatgaaaaaaaataaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|||| |||||| |||||| || || ||||||||||||||||||
Sbjct: 61 aaaacaagtcacacataaaatattaatcatgttttatcatctaa 104
>RF01062;MIR812;AP005181.4/139958-139787 39947:Oryza sativa Japonica
Group
Length = 172
Score = 79.8 bits (40), Expect = 2e-14
Identities = 93/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||| |||||||||||||||||||||||||||||| ||| |||||| || ||
Sbjct: 1 gtttctgtgtccaacgtttgaccgtccgtcttatttaaaaaaattat-aaaaaaaataaa 59
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| | |||||| ||||||| || || |||||||||||||||||| |||||||
Sbjct: 60 aagacaagtcacgcataaaatattaatcatgttttatcatctaacaacaata 111
>RF01062;MIR812;AAAA02025109.1/3518-3691 39946:Oryza sativa Indica
Group
Length = 174
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaa 148
||||||||||||| ||||| |||| |||||||||||||||||||||||||||
Sbjct: 62 aaaaaataagtcaagcatagagtattattcatgttttatcatctaataacaa 113
>RF01062;MIR812;AAAA02019237.1/36164-36339 39946:Oryza sativa Indica
Group
Length = 176
Score = 79.8 bits (40), Expect = 2e-14
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||| ||||||||||||||| |||||||||| ||| ||||||||| ||
Sbjct: 1 gtttccgtgcccaacgtttgaccgttcgtcttatttaaaaaaattatgaaaaaaactaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|| | |||||| ||||||| || || ||||||||||||||||||
Sbjct: 61 aagacaagtcatgcataaaatattaatcatgttttatcatctaa 104
>RF01062;MIR812;AAAA02030037.1/1370-1196 39946:Oryza sativa Indica
Group
Length = 175
Score = 79.8 bits (40), Expect = 2e-14
Identities = 92/111 (82%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnn--aaa 99
||||||||||| |||||||||||| |||||||||||| |||||| | |||
Sbjct: 4 tccgtgtccaatgtttgaccgtccatcttatttgaaaaaattataattttttttttaaaa 63
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| ||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 64 aaattagtcacacataaagtattattcatgttttatcatctaataacaata 114
>RF01062;MIR812;AACV01001613.1/49180-49352 39947:Oryza sativa
Japonica Group
Length = 173
Score = 79.8 bits (40), Expect = 2e-14
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 55 tttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtcaggcat 114
|||||||||||||||||||| ||| | ||| ||| ||||||| ||||| ||
Sbjct: 17 tttgaccgtccgtcttatttaaaaaatttacgaaaaattttaaaaaaattagtcacatat 76
Query: 115 aaagtactattcatgttttatcatctaataacaata 150
||||||||||||||||||||||||||||||||||||
Sbjct: 77 aaagtactattcatgttttatcatctaataacaata 112
>RF01062;MIR812;AACV01022589.1/20740-20577 39947:Oryza sativa
Japonica Group
Length = 164
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatata 152
||||||||||| | |||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 51 aaaaaataagttaagcataaagtattattcatgttttatcatctaataataatata 106
>RF01062;MIR812;AP008209.1/13818681-13818846 39947:Oryza sativa
Japonica Group
Length = 166
Score = 79.8 bits (40), Expect = 2e-14
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 55 tttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtcaggcat 114
||||||| |||||||||||| ||| | ||||||| ||||||| ||||| |||
Sbjct: 18 tttgaccatccgtcttatttaaaaaatttatgaaaaatattaaaaaaattagtcacacat 77
Query: 115 aaagtactattcatgttttatcatctaataacaata 150
||||||||||||||||||||| ||||||||||||||
Sbjct: 78 aaagtactattcatgttttattatctaataacaata 113
>RF01062;MIR812;AC092389.4/14259-14090 39947:Oryza sativa Japonica
Group
Length = 170
Score = 79.8 bits (40), Expect = 2e-14
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||| |||| ||| ||||||||| | |||||||| ||| ||||||||| ||
Sbjct: 1 gtttccatgtctaacatttgaccgttcatcttatttaaaaaaattatgaaaaaatttaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|| |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 61 aagataagtcatgcataaagtattattcatgttttatcatctaa 104
>RF01062;MIR812;AACV01025273.1/3037-2868 39947:Oryza sativa Japonica
Group
Length = 170
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaa 148
||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 57 aaaaaattagtcatacataaagtactattcatgttttatcatctaataacaa 108
>RF01062;MIR812;FJ032632.1/66474-66642 52545:Oryza alta
Length = 169
Score = 77.8 bits (39), Expect = 7e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 112 cataaagtactattcatgttttatcatctaataacaata 150
|||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cataaagtactattcatgttttatcatctaataacaata 112
>RF01062;MIR812;AAAA02026221.1/11614-11443 39946:Oryza sativa Indica
Group
Length = 172
Score = 77.8 bits (39), Expect = 7e-14
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 44 cgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaat 103
|||||| ||| |||||| ||| |||||||| ||| ||||||||| |||||||
Sbjct: 6 cgtgtctaacttttgactgtctatcttatttaaaaaaattatgaaaaaaataaaaaaaat 65
Query: 104 aagtcaggcataaagtactattcatgttttatcatctaa 142
|||||| |||||||||| |||||||||||||||||||||
Sbjct: 66 aagtcatgcataaagtattattcatgttttatcatctaa 104
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaa 78
|||| |||||||||||||||||||||||| |||| |||||
Sbjct: 172 gttttcgtgtccaacgtttgaccgtccgttttatatgaaa 133
>RF01062;MIR812;AACV01005232.1/20210-20383 39947:Oryza sativa
Japonica Group
Length = 174
Score = 77.8 bits (39), Expect = 7e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattat 85
|||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1 gtttccgtgtccaacgtttgactgtccgtcttatttgaaaaaattat 47
>RF01062;MIR812;AAAA02032399.1/2847-2676 39946:Oryza sativa Indica
Group
Length = 172
Score = 77.8 bits (39), Expect = 7e-14
Identities = 85/100 (85%), Gaps = 3/100 (3%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||| |||||||| |||| | ||||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtcggtcttattcgaaaaatttatgaa--aaaattaa 58
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcat 138
||||||| ||| |||||||||||||||||||||||||||
Sbjct: 59 aaaataa-tcacacataaagtactattcatgttttatcat 97
>RF01062;MIR812;AAAA02018613.1/1001-834 39946:Oryza sativa Indica
Group
Length = 168
Score = 77.8 bits (39), Expect = 7e-14
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||| |||||||||||||||||||||||||||||| || |||||| ||
Sbjct: 1 gtttccgtgcccaacgtttgaccgtccgtcttatttgaaaaaaatatgaaaaaaattaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| | |||||| ||||||| || || ||||||||||| || ||| ||||||
Sbjct: 61 aagacaagtcacgcataaaatattaatcatgttttattatgtaacaacaat 111
>RF01062;MIR812;AAAA02035158.1/27030-27199 39946:Oryza sativa Indica
Group
Length = 170
Score = 77.8 bits (39), Expect = 7e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 112 cataaagtactattcatgttttatcatctaataacaata 150
|||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cataaagtactattcatgttttatcatctaataacaata 110
>RF01062;MIR812;AP008214.1/15372362-15372531 39947:Oryza sativa
Japonica Group
Length = 170
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 101 aataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaataca 160
||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 61 aataagttacgcataaagtactattcatgttttataatctaataaca--ataaaaatact 118
Query: 161 aatcat 166
||||||
Sbjct: 119 aatcat 124
>RF01062;MIR812;AAAA02005258.1/3696-3879 39946:Oryza sativa Indica
Group
Length = 184
Score = 77.8 bits (39), Expect = 7e-14
Identities = 83/99 (83%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 45 gtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa-at 103
|||||||||||||||||||||||||||||| ||| ||||||||| ||||| |
Sbjct: 7 gtgtccaacgtttgaccgtccgtcttatttaaaaaaattatgaaaaaaaattaaaaagac 66
Query: 104 aagtcaggcataaagtactattcatgttttatcatctaa 142
|| ||| |||||||||| || ||||||||||||||||||
Sbjct: 67 aaatcacgcataaagtattaatcatgttttatcatctaa 105
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaa 78
|||| ||||||||||||||||| |||||| |||| |||||
Sbjct: 184 gttttcgtgtccaacgtttgactgtccgttttatatgaaa 145
>RF01062;MIR812;AP008217.1/19738905-19739075 39947:Oryza sativa
Japonica Group
Length = 171
Score = 77.8 bits (39), Expect = 7e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
||||||||||| ||||||| ||||||| |||||||||||||||||||||||
Sbjct: 64 aaaataagtcatgcataaaatactatttatgttttatcatctaataacaat 114
>RF01062;MIR812;AC210491.1/137316-137488 4538:Oryza glaberrima
(African rice)
Length = 173
Score = 77.8 bits (39), Expect = 7e-14
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
||||||||||||||||||||||||| ||||||||||||| |||||| || |||
Sbjct: 2 tttccgtgtccaacgtttgaccgtctgtcttatttgaaaaaattataaaaaaaaattaaa 61
Query: 100 aa-ataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| | || ||| ||||||| || || |||||||||||||||||| ||||||
Sbjct: 62 aagacaaatcatgcataaaatattaatcatgttttatcatctaacaacaat 112
>RF01062;MIR812;AACV01023241.1/21629-21456 39947:Oryza sativa
Japonica Group
Length = 174
Score = 77.8 bits (39), Expect = 7e-14
Identities = 94/114 (82%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatg--aannnnnnnn 96
|||| |||| ||||||||||||||||||| |||||||||| ||||||| ||
Sbjct: 1 gttttcgtgcccaacgtttgaccgtccgttttatttgaaaaaattatgaaaaaaatttta 60
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||||| |||||| ||||||| || || |||||||||||||||||| |||||||
Sbjct: 61 aaaaaacaagtcacgcataaaatattaatcatgttttatcatctaacaacaata 114
>RF01062;MIR812;AP008214.1/10004707-10004535 39947:Oryza sativa
Japonica Group
Length = 173
Score = 77.8 bits (39), Expect = 7e-14
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||||||||| |||||||||||||||||||| ||| || |||||| ||
Sbjct: 1 gtttccgtgtccaacatttgaccgtccgtcttatttaaaaaaaatatgaaaaagtttaaa 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| | |||||| | |||||||| || |||| ||||||||||||| ||||||
Sbjct: 61 aagacaagtcacgtataaagtattaatcatattttatcatctaacaacaat 111
>RF01062;MIR812;AC079935.3/88083-88241 4530:Oryza sativa (rice)
Length = 159
Score = 77.8 bits (39), Expect = 7e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaa 155
||||||||||||| |||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 50 aaaaaataagtcacgcatgaagtactattcacattttatcatctaataacaataaaaaa 108
>RF01062;MIR812;AP008210.1/23326740-23326912 39947:Oryza sativa
Japonica Group
Length = 173
Score = 77.8 bits (39), Expect = 7e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattat 85
|||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gtttccgtgtacaacgtttgaccgtccgtcttatttgaaaaaattat 47
>RF01062;MIR812;AAAA02015466.1/16288-16449 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 7e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 112 cataaagtactattcatgttttatcatctaataacaatataaa 154
|||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 63 cataaagtactattcatgttttatcatctaataataatataaa 105
>RF01062;MIR812;AP008213.1/8022098-8022262 39947:Oryza sativa
Japonica Group
Length = 165
Score = 77.8 bits (39), Expect = 7e-14
Identities = 87/104 (83%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||| ||||||||||||||||||||||||||| ||| ||||||||| |||||
Sbjct: 4 tccgtatccaacgtttgaccgtccgtcttatttaaaaaaattatgaa--aaagttaaaaa 61
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataa 145
| |||||| ||||||| | |||||||||||||||||||||||
Sbjct: 62 aaaagtcacatataaagtccaattcatgttttatcatctaataa 105
>RF01062;MIR812;AAAA02000165.1/18247-18397 39946:Oryza sativa Indica
Group
Length = 151
Score = 77.8 bits (39), Expect = 7e-14
Identities = 86/103 (83%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
|||||||||||||||||||||||| |||||||||||| | ||||||| |||||
Sbjct: 4 tccgtgtccaacgtttgaccgtccttcttatttgaaaaatttatgaaataattaaaaaaa 63
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaata 144
|| || || ||||||||||||||||| |||||| ||||||||
Sbjct: 64 at-agccacacataaagtactattcatattttattatctaata 105
>RF01062;MIR812;AACV01012113.1/19788-19615 39947:Oryza sativa
Japonica Group
Length = 174
Score = 77.8 bits (39), Expect = 7e-14
Identities = 51/54 (94%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 113 ataaagtactattcatgttttatcatctaataacaatataaaaatacaaatcat 166
||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 76 ataaagtactattcatgttttatcatctaataaca--ataaaaatactaatcat 127
>RF01062;MIR812;AP004052.3/110986-110823 39947:Oryza sativa Japonica
Group
Length = 164
Score = 77.8 bits (39), Expect = 7e-14
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 101 aataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaataca 160
||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 56 aataagtcatacataaagtattattcatgttttatcatctaataaca--ataaaaatact 113
Query: 161 aatcat 166
||||||
Sbjct: 114 aatcat 119
>RF01062;MIR812;AAAA02015747.1/13525-13343 39946:Oryza sativa Indica
Group
Length = 183
Score = 77.8 bits (39), Expect = 7e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 112 cataaagtactattcatgttttatcatctaataacaata 150
|||||||||||||||||||||||||||||||||||||||
Sbjct: 85 cataaagtactattcatgttttatcatctaataacaata 123
>RF01062;MIR812;AP004702.3/6516-6676 39947:Oryza sativa Japonica
Group
Length = 161
Score = 77.8 bits (39), Expect = 7e-14
Identities = 91/109 (83%), Gaps = 12/109 (11%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||| |||||||||||||||||||| |||||||||| | ||||||| |||
Sbjct: 4 tccgtatccaacgtttgaccgtccgttttatttgaaaaatttatgaa----------aaa 53
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 54 attagtca--cacaaagtactattcatgttttatcatctaataacaata 100
>RF01062;MIR812;AAAA02020803.1/72981-73171 39946:Oryza sativa Indica
Group
Length = 191
Score = 77.8 bits (39), Expect = 7e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 113 ataaagtactattcatgttttatcatctaataacaatataaaaatac 159
|||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 74 ataaagtactattcatgttttatcatctaataacaataaaaatatac 120
>RF01062;MIR812;AAAA02000618.1/9504-9332 39946:Oryza sativa Indica
Group
Length = 173
Score = 77.8 bits (39), Expect = 7e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 113 ataaagtactattcatgttttatcatctaataacaatataaaaatac 159
|||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 72 ataaagtactattcatgttttatcatctaataacaataagaaaatac 118
>RF01062;MIR812;AP003250.3/7075-6904 39947:Oryza sativa Japonica
Group
Length = 172
Score = 77.8 bits (39), Expect = 7e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 104 aagtcaggcataaagtactattcatgttttatcatctaataacaatataaa 154
|||||| ||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 65 aagtcacgcataaagtactattcatgttttataatctaataacagtataaa 115
>RF01062;MIR812;CR855098.1/26082-26242 4530:Oryza sativa (rice)
Length = 161
Score = 77.8 bits (39), Expect = 7e-14
Identities = 63/70 (90%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaa 156
||||||| ||||| ||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 47 aaaaaattagtcacacataaagtactattcatgtattatcatctaataaca--ataaaaa 104
Query: 157 tacaaatcat 166
||| ||||||
Sbjct: 105 tactaatcat 114
>RF01062;MIR812;AACV01010650.1/29162-28990 39947:Oryza sativa
Japonica Group
Length = 173
Score = 77.8 bits (39), Expect = 7e-14
Identities = 63/70 (90%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaa 156
||||||||||||| |||||||||| |||| || |||||||||||||||||| |||||||
Sbjct: 59 aaaaaataagtcatgcataaagtattatttatattttatcatctaataaca--ataaaaa 116
Query: 157 tacaaatcat 166
||| ||||||
Sbjct: 117 taccaatcat 126
>RF01062;MIR812;AP008208.1/1936493-1936324 39947:Oryza sativa
Japonica Group
Length = 170
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 105 agtcaggcataaagtactattcatgttttatcatctaataacaatataaaaatacaaatc 164
||||| |||||||||| |||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 64 agtcacgcataaagtaatattcatgttttatcatctaataaca--ataaaaatactaatc 121
Query: 165 at 166
||
Sbjct: 122 at 123
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 44 cgtgtccaacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||| ||||||||||||||||||||
Sbjct: 165 cgtgtccaacgtttaaccgtccgtcttatttgaaa 131
>RF01062;MIR812;AACV01025600.1/7461-7629 39947:Oryza sativa Japonica
Group
Length = 169
Score = 77.8 bits (39), Expect = 7e-14
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
|||||||||||||||||||| || ||||||||||||||| | ||||||| |||
Sbjct: 2 tttccgtgtccaacgtttgatcgcccgtcttatttgaaaaatttatgaaaaaaattaaaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||||||| | || | || ||||||| ||||||||| ||||||||| ||||
Sbjct: 62 aaataagttacgcgtcaaatactattaatgttttattatctaataataata 112
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaa 77
||||| |||||||| |||||||||||||||||||||||
Sbjct: 168 tttccatgtccaacatttgaccgtccgtcttatttgaa 131
>RF01062;MIR812;AAAA02005541.1/24465-24293 39946:Oryza sativa Indica
Group
Length = 173
Score = 77.8 bits (39), Expect = 7e-14
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 50 caacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtca 109
|||||||| |||||||||||||||||||| | ||||||| ||| | | |||||
Sbjct: 12 caacgtttaaccgtccgtcttatttgaaaaatttatgaaaaaattaaaaacatttagtca 71
Query: 110 ggcataaagtactattcatgttttatcatctaata 144
|||||||||||||||||||||||||||||||||
Sbjct: 72 cacataaagtactattcatgttttatcatctaata 106
Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 50 caacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||||||||||||||||||
Sbjct: 162 caacgtttgaccgtccgtcttatttgaaa 134
>RF01062;MIR812;AP005545.3/134472-134636 39947:Oryza sativa Japonica
Group
Length = 165
Score = 77.8 bits (39), Expect = 7e-14
Identities = 93/112 (83%), Gaps = 8/112 (7%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||| |||||||| | ||| |||||||||||| | ||||||| ||
Sbjct: 1 gtttccgtgtccgacgtttgatcatccatcttatttgaaaaatttatgaa--------aa 52
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||||| |||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 53 aaaataagtcatacataaaatactatttatgttttatcatctactaacaata 104
>RF01058;MIR806;AAAA02032480.1/10824-10585 39946:Oryza sativa Indica
Group
Length = 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
|||||||| ||||| ||||| |||||||||||||||||| || |||| |||
Sbjct: 204 tttccgtgcccaac-tttgatcgtccgtcttatttgaaatttttttgaaaaaaatttaaa 146
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
| |||||||| || ||||||||||||||||||||||||||| |||||||||
Sbjct: 145 acataagtcacgcgtaaagtactattcatgttttatcatctcataacaata 95
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa Indica
Group
Length = 245
Score = 77.8 bits (39), Expect = 7e-14
Identities = 94/114 (82%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 53 cgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtcaggc 112
|||||||||||||||||||||||||| | || |||| ||| | | ||||| |
Sbjct: 195 cgtttgaccgtccgtcttatttgaaaaatttgtgaaaaaattaaaaacatttagtcacac 136
Query: 113 ataaagtactattcatgttttatcatctaataacaatataaaaatacaaatcat 166
|||||||||||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 135 ataaagtactattcatgttttatcatctaatagca--ataaaaatactaatcat 84
Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 50 caacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||||||||||||||||||
Sbjct: 48 caacgtttgaccgtccgtcttatttgaaa 76
>RF01062;MIR812;AAAA02012237.1/9154-8991 39946:Oryza sativa Indica
Group
Length = 164
Score = 75.8 bits (38), Expect = 3e-13
Identities = 93/112 (83%), Gaps = 5/112 (4%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||||||||||||||||||||||||| |||||||||| || |||||| ||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtc----ttatttgaaaaaaatatgaaaaaaata-aa 55
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|| |||||||| |||||||||| || |||||||||||||||||| |||||||
Sbjct: 56 aagataagtcacgcataaagtattaatcatgttttatcatctaacaacaata 107
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtct 69
|||||||||||||||||||||| ||||||||
Sbjct: 164 gtttccgtgtccaacgtttgactgtccgtct 134
>RF01062;MIR812;ABRL01002334.1/1767-1595 65489:Oryza barthii
Length = 173
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 59 aaaaaattagtcacacataaagtactattcatattttatcatctaataacaata 112
>RF01062;MIR812;AAAA02018796.1/31061-30888 39946:Oryza sativa Indica
Group
Length = 174
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||||||| |||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 60 aaaaaataagtcacgcatgaagtaatattcgtgttttatcatctaataacaata 113
>RF01062;MIR812;AAAA02000668.1/58953-58791 39946:Oryza sativa Indica
Group
Length = 163
Score = 75.8 bits (38), Expect = 3e-13
Identities = 88/106 (83%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 45 gtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaata 104
|||||||| |||||||||||||| |||||||||| | ||||||| |||| ||
Sbjct: 1 gtgtccaatgtttgaccgtccgttttatttgaaaaatttatgaattattttttaaaagta 60
Query: 105 agtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 61 -gtcacacgtaaagtactattcatgttttatcatctaataacaata 105
>RF01062;MIR812;AAAA02031000.1/27408-27247 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||||||| | ||||| |||||||||| |||||||||||||||||||||
Sbjct: 48 aaaaaataagtcatgtataaaatactattcatattttatcatctaataacaata 101
>RF01062;MIR812;AAAA02030956.1/46486-46317 39946:Oryza sativa Indica
Group
Length = 170
Score = 75.8 bits (38), Expect = 3e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 101 aataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||| ||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 62 aataagtcacgcataaagtactatttatgttttataatctaataacaata 111
>RF01062;MIR812;AP008215.1/10128587-10128414 39947:Oryza sativa
Japonica Group
Length = 174
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||| ||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 59 aaaaaattagtcacacataaaatactattcatgttttatcatctaataacaata 112
>RF01062;MIR812;AACV01014086.1/6692-6862 39947:Oryza sativa Japonica
Group
Length = 171
Score = 75.8 bits (38), Expect = 3e-13
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
||||||||||| |||||||||| |||||||||||||||| ||||||||| ||
Sbjct: 1 gtttccgtgtctaacgtttgactgtccgtcttatttgaagaaattatgaa-aaaattaaa 59
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|| |||||||| ||||||| || || | |||||||||||||||| ||||||
Sbjct: 60 aagataagtcaagcataaaatattaattatgttttatcatctaacaacaat 110
>RF01062;MIR812;AAAA02018379.1/10091-9918 39946:Oryza sativa
Indica Group
Length = 174
Score = 75.8 bits (38), Expect = 3e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaa 88
|||||||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatatgataaaattatgaa 50
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttat 72
|||||||||||||||||||||| |||||||||||
Sbjct: 174 gtttccgtgtccaacgtttgactgtccgtcttat 141
>RF01062;MIR812;AACV01008192.1/13372-13203 39947:Oryza sativa
Japonica Group
Length = 170
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaa 142
||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 58 aaaaaataagtcatgcataaagtactattcatattttatcatctaa 103
>RF01062;MIR812;AP008218.1/8955365-8955194 39947:Oryza sativa
Japonica Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 85/102 (83%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 50 caacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaata-agtc 108
|||||||| ||||||||| |||||| ||| ||||||||| |||||| | ||||
Sbjct: 12 caacgtttaaccgtccgtattatttaaaaaaattatgaaaaaattgaaaaaaaaatagtc 71
Query: 109 aggcataaagtactattcatgttttatcatctaataacaata 150
| | |||||||||||||||||||||||||||||||||||||
Sbjct: 72 acacgtaaagtactattcatgttttatcatctaataacaata 113
>RF01062;MIR812;AP008213.1/3012705-3012544 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||||||||| || ||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 50 aaaaaataagccatgcataaagtgctattcatgttttatgatctaataacaata 103
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 53 cgtttgaccgtccgtcttattt 74
||||||||||||||||||||||
Sbjct: 148 cgtttgaccgtccgtcttattt 127
>RF01062;MIR812;AAAA02017523.1/1914-2075 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 37 gggtttccgtgtccaacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 gggtttccgtgtccaacgtttgaccgtccgccttatttgaaa 42
>RF01062;MIR812;AAAA02032459.1/5529-5364 39946:Oryza sativa Indica
Group
Length = 166
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| |||||||||||||||||| ||||||||||| |||||||||
Sbjct: 54 aaaatataagtcacgcataaagtactattcatattttatcatcttataacaata 107
>RF01062;MIR812;AACV01015165.1/3379-3206 39947:Oryza sativa
Japonica Group
Length = 174
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaatta 84
||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 1 gtttccgtgtctaacgtttgaccgtccgtcttatttgaaaaaatta 46
>RF01062;MIR812;AAAA02018832.1/20699-20526 39946:Oryza sativa Indica
Group
Length = 174
Score = 75.8 bits (38), Expect = 3e-13
Identities = 91/110 (82%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatg-aannnnnnnnaaaa 100
|||||||| |||||||||||||||||||||||| ||| | ||||| || ||||
Sbjct: 4 tccgtgtctaacgtttgaccgtccgtcttatttaaaaaatttatgcaattttttttaaaa 63
Query: 101 aataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
| | ||| | |||||||||||||| ||||||||||||||||||||||||
Sbjct: 64 agttagtgacacataaagtactatttatgttttatcatctaataacaata 113
>RF01062;MIR812;AP008217.1/3029083-3028927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 46 aaaacataagtcacgcataaaatactattcatgttttataatctaataacaata 99
>RF01062;MIR812;AP003752.3/66624-66479 39947:Oryza sativa Japonica
Group
Length = 146
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 98 aaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaa 155
|||||| | ||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 49 aaaaatgaatcatgcataaagtactattcatgttttatcatctaataataataaaaaa 106
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttattt 74
||||||||||||||||||||||| ||||||||||||
Sbjct: 146 gtttccgtgtccaacgtttgaccatccgtcttattt 111
>RF01062;MIR812;AP008210.1/27744661-27744832 39947:Oryza sativa
Japonica Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattat 85
|||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 2 tttccgtgtccaacgtttaaccgtccgtcttatttgaaaaaattat 47
>RF01062;MIR812;AP004864.3/41892-41733 39947:Oryza sativa Japonica
Group
Length = 160
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||||||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 50 aaaaaataagtcacacataaagtactattcatgttttataatttaataacaata 103
>RF01062;MIR812;AAAA02010446.1/17902-18064 39946:Oryza sativa Indica
Group
Length = 163
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| | |||||||||||||||||||||||||||| |||||||||
Sbjct: 51 aaaacataagtcacgaataaagtactattcatgttttatcatctcataacaata 104
>RF01062;MIR812;AAAA02030816.1/30098-30254 39946:Oryza sativa Indica
Group
Length = 157
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 46 aaaacataagtcacgcataaaatactattcatgttttataatctaataacaata 99
>RF01062;MIR812;AAAA02013962.1/8250-8079 39946:Oryza sativa Indica
Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaa 98
|||| |||||||||||||| ||| |||||||||||||||| | |||||| |
Sbjct: 1 gttttcgtgtccaacgtttaaccttccgtcttatttgaaaaatttatgagaaaattttga 60
Query: 99 aaaataagtcaggcataaagtactattcatgttttatcatctaataacaa 148
||| ||||| | ||||||||||||||||| |||||||||||||||||||
Sbjct: 61 aaattaagttactcataaagtactattcatattttatcatctaataacaa 110
>RF01062;MIR812;AP008207.1/7005737-7005911 39947:Oryza sativa
Japonica Group
Length = 175
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 105 agtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 65 agtcacgcataaagtactatttatgttttatcatctaataacaata 110
>RF01062;MIR812;AAAA02029874.1/2728-2899 39946:Oryza sativa Indica
Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| ||||||||||||||||||||||||| |||||||| |||||
Sbjct: 60 aaaatataagtcatgcataaagtactattcatgttttataatctaatagcaata 113
>RF01062;MIR812;AP004689.3/27890-27719 39947:Oryza sativa Japonica
Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 60 aaaacataagtcacgcataaagtactattcatgttttatcatctcataataata 113
>RF01062;MIR812;AAAA02021196.1/7908-8075 39946:Oryza sativa Indica
Group
Length = 168
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 56 aaaacataagtcacgcataaagtactattcatattttataatctaataacaata 109
>RF01062;MIR812;AAAA02032978.1/4853-5023 39946:Oryza sativa Indica
Group
Length = 171
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| |||||||||| ||||||||||||||||||| |||||||||
Sbjct: 59 aaaacataagtcacgcataaagtattattcatgttttatcatctcataacaata 112
>RF01062;MIR812;AL732646.5/74405-74574 4530:Oryza sativa (rice)
Length = 170
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| |||||||||| ||||||||||||||||||| |||||||||
Sbjct: 59 aaaacataagtcatgcataaagtattattcatgttttatcatctcataacaata 112
>RF01062;MIR812;AAAA02018721.1/8423-8257 39946:Oryza sativa Indica
Group
Length = 167
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| |||||||||| |||||||||||||||||||||||| ||||
Sbjct: 54 aaaacataagtcacgcataaagtattattcatgttttatcatctaataataata 107
>RF01062;MIR812;AC217582.2/115116-115285 4537:Oryza punctata
Length = 170
Score = 75.8 bits (38), Expect = 3e-13
Identities = 89/107 (83%), Gaps = 5/107 (4%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
||||||||||| |||||||| |||||||||||||||| | | ||||| | |||
Sbjct: 4 tccgtgtccaatgtttgaccatccgtcttatttgaaaaattaatgaaaaa-----ataaa 58
Query: 102 ataagtcaggcataaagtactattcatgttttatcatctaataacaa 148
| |||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 59 aaaagtcacacataaagtactatttatgttttatcatctaataacaa 105
>RF01062;MIR812;AAAA02038713.1/1148-1318 39946:Oryza sativa Indica
Group
Length = 171
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||| ||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 57 aaaaaattagtcacacataaaatactattcatgttttatcatctaataacaata 110
>RF01062;MIR812;AACV01024151.1/27300-27132 39947:Oryza sativa
Japonica Group
Length = 169
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||| ||||| ||||||| |||||||||| |||||||||||||||||||||
Sbjct: 57 aaaaaattagtcacgcataaaatactattcatattttatcatctaataacaata 110
>RF01062;MIR812;AACV01021504.1/5879-5708 39947:Oryza sativa Japonica
Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||||||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 58 aaaaaataagtcacacataaagtactattcatgttctaccatctaataacaata 111
>RF01062;MIR812;AP008217.1/5375990-5376154 39947:Oryza sativa
Japonica Group
Length = 165
Score = 75.8 bits (38), Expect = 3e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 101 aataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||| ||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 57 aataagtcacgcataaagtactatttatgttttataatctaataacaata 106
>RF01062;MIR812;AACV01002189.1/17402-17236 39947:Oryza sativa
Japonica Group
Length = 167
Score = 75.8 bits (38), Expect = 3e-13
Identities = 88/106 (83%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 44 cgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaat 103
||||| |||||||||||||||| |||||||||||| ||||||||| ||||||
Sbjct: 4 cgtgtacaacgtttgaccgtccatcttatttgaaaaaattatgaaaaaaatttaaaaaa- 62
Query: 104 aagtcaggcataaagtactattcatgttttatcatctaataacaat 149
|||||| ||||||| || || |||||||||||| ||||| ||||||
Sbjct: 63 aagtcacgcataaaatattaatcatgttttatcctctaacaacaat 108
>RF01062;MIR812;AACV01002281.1/10667-10512 39947:Oryza sativa
Japonica Group
Length = 156
Score = 75.8 bits (38), Expect = 3e-13
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaa 99
|||||||||||||||||||||||| |||||||||||||| || ||| || |||
Sbjct: 2 tttccgtgtccaacgtttgaccgttcgtcttatttgaaaaaaatataaaaaaaattaaaa 61
Query: 100 aaataagtcaggcataaagtactattcatgttttatcatcta 141
| |||||||| |||| || || || |||||||||||||||||
Sbjct: 62 agataagtcacgcatgaaatattaatcatgttttatcatcta 103
>RF01062;MIR812;AC122149.2/46861-46700 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| |||||||||| ||||||||||||||||||||| |||||||
Sbjct: 48 aaaagataagtcacgcataaagtattattcatgttttatcatctaacaacaata 101
>RF01062;MIR812;AP008208.1/9932216-9932389 39947:Oryza sativa
Japonica Group
Length = 174
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 105 agtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 66 agtcacgcataaagtactattcatgttttatcatctaataataata 111
>RF01062;MIR812;AP004568.3/98391-98224 39947:Oryza sativa Japonica
Group
Length = 168
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 57 aaaaaataagttatgcataaaatactatttatgttttatcatctaataacaata 110
>RF01062;MIR812;AAAA02001388.1/1048-1218 39946:Oryza sativa Indica
Group
Length = 171
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||| ||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 58 aaaaattaagtcacacataaattactattcatgttttatcatctaataacaata 111
>RF01062;MIR812;AP008210.1/20084948-20084774 39947:Oryza sativa
Japonica Group
Length = 175
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaa 142
|||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 aaaagataagtcatgcataaagtactattcatgttttatcatctaa 106
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 51 aacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||||||||||| |||||
Sbjct: 163 aacgtttgaccgtccgtcttatatgaaa 136
>RF01062;MIR812;AACV01012794.1/451-282 39947:Oryza sativa Japonica
Group
Length = 170
Score = 75.8 bits (38), Expect = 3e-13
Identities = 103/125 (82%), Gaps = 3/125 (2%)
Strand = Plus / Plus
Query: 43 ccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaa 102
|||||||| |||||||||||| ||| |||||| ||| | ||||||| ||||||
Sbjct: 1 ccgtgtccgacgtttgaccgttcgttttatttaaaaaatttatgaaaaatttgaaaaaaa 60
Query: 103 ta-agtcaggcataaagtactattcatgttttatcatctaataacaatataaaaatacaa 161
| ||||| ||||||||||||||||||||||||||| |||||||| |||||||||| |
Sbjct: 61 aatagtcacacataaagtactattcatgttttatcatttaataaca--ataaaaatacta 118
Query: 162 atcat 166
|||||
Sbjct: 119 atcat 123
>RF01062;MIR812;AP008209.1/687985-688157 39947:Oryza sativa Japonica
Group
Length = 173
Score = 75.8 bits (38), Expect = 3e-13
Identities = 87/106 (82%)
Strand = Plus / Plus
Query: 45 gtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaata 104
|||| |||| ||| |||||||||||||||||||| | |||||| ||||| |
Sbjct: 7 gtgttcaacatttaaccgtccgtcttatttgaaaaatttatgagaaaattaaaaaaagtt 66
Query: 105 agtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 67 agtcacacataaagtactattcatgttttatcatctagtaacaata 112
>RF01062;MIR812;AP008208.1/19948735-19948578 39947:Oryza sativa
Japonica Group
Length = 158
Score = 75.8 bits (38), Expect = 3e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 113 ataaagtactattcatgttttatcatctaataacaata 150
||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ataaagtactattcatgttttatcatctaataacaata 100
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 44 cgtgtccaacgtttgaccgtccgtcttattt 74
||||||||||| |||| ||||||||||||||
Sbjct: 153 cgtgtccaacgcttgatcgtccgtcttattt 123
>RF01062;MIR812;AL662987.3/136857-136685 39947:Oryza sativa Japonica
Group
Length = 173
Score = 75.8 bits (38), Expect = 3e-13
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 111 gcataaagtactattcatgttttatcatctaataacaatataaaaatacaaatcatnnnn 170
|||||||||||||||||| |||||||||||||||||| |||||||||| ||||||
Sbjct: 73 gcataaagtactattcatattttatcatctaataaca--ataaaaatactaatcataaaa 130
Query: 171 nnnntttaaataagacggacg 191
|||||||||||||||||
Sbjct: 131 atattttaaataagacggacg 151
>RF01062;MIR812;AP003931.3/11982-12155 39947:Oryza sativa Japonica
Group
Length = 174
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 113 ataaagtactattcatgttttatcatctaataacaatataaa 154
|||||||| |||||||||||||||||||||||||||||||||
Sbjct: 75 ataaagtattattcatgttttatcatctaataacaatataaa 116
>RF01062;MIR812;AY946579.1/194-35 4530:Oryza sativa (rice)
Length = 160
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaatta 84
|||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 1 gtttccgtgtccaacgtttgaccgtccgtcttatttaaaaaaatta 46
>RF01062;MIR812;AC107315.1/134199-134032 4530:Oryza sativa (rice)
Length = 168
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 57 aaaacataagtcacgcataaaatactattcatgttttataatctaataacaata 110
>RF01062;MIR812;AAAA02008612.1/20625-20793 39946:Oryza sativa Indica
Group
Length = 169
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
|||| |||| ||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 60 aaaacataactcacgcataaagtactattcatgttttataatctaataacaata 113
>RF01062;MIR812;AAAA02010760.1/63763-63594 39946:Oryza sativa
Indica Group
Length = 170
Score = 75.8 bits (38), Expect = 3e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 39 gtttccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaa 88
||||||||||||||||||| |||||||||||||||| ||| |||||||||
Sbjct: 1 gtttccgtgtccaacgtttaaccgtccgtcttatttaaaaaaattatgaa 50
>RF01062;MIR812;AACV01015179.1/5893-5722 39947:Oryza sativa Japonica
Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 113 ataaagtactattcatgttttatcatctaataacaata 150
||||||||||||||||||||||||||||||||||||||
Sbjct: 74 ataaagtactattcatgttttatcatctaataacaata 111
>RF01062;MIR812;AC212268.1/10262-10434 4538:Oryza glaberrima
(African rice)
Length = 173
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaaaa 156
||||||||||||| |||||||||||||||||| ||||||||| |||||||| | |||||
Sbjct: 57 aaaaaataagtcacgcataaagtactattcatattttatcattcaataacaacaaaaaaa 116
Query: 157 ta 158
||
Sbjct: 117 ta 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttattt 74
|||| ||||||||||||||||| | ||||||||||
Sbjct: 172 tttctgtgtccaacgtttgaccattcgtcttattt 138
>RF01062;MIR812;AAAA02018044.1/2103-2270 39946:Oryza sativa Indica
Group
Length = 168
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaatataaa 154
|||| |||||||| ||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 58 aaaacataagtcacacataaagtactattcatattttataatctaataacaatataaa 115
>RF01062;MIR812;AP002866.1/157116-157289 39947:Oryza sativa Japonica
Group
Length = 174
Score = 75.8 bits (38), Expect = 3e-13
Identities = 91/110 (82%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaa 101
|||||||| ||||||||||||| ||||||||||||| | ||||||| ||||
Sbjct: 4 tccgtgtctaacgtttgaccgtttgtcttatttgaaaaacttatgaaaaaaactaaaaat 63
Query: 102 ata-agtcaggcataaagtactattcatgttttatcatctaataacaata 150
| | ||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 64 aaatagtcacccataaagtattattcatgttttatcatctaataacaata 113
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 46 tgtccaacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||||||| ||||||||||||||
Sbjct: 167 tgtccaacgtttgaccgttcgtcttatttgaaa 135
>RF01062;MIR812;AACV01023056.1/14278-14109 39947:Oryza sativa
Japonica Group
Length = 170
Score = 75.8 bits (38), Expect = 3e-13
Identities = 86/103 (83%), Gaps = 4/103 (3%)
Strand = Plus / Plus
Query: 48 tccaacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagt 107
|||||||||||| | |||||||||||| ||| ||||||||| || ||||||||
Sbjct: 12 tccaacgtttgatcctccgtcttatttaaaataattatgaaaaat----aataaataagt 67
Query: 108 caggcataaagtactattcatgttttatcatctaataacaata 150
|| |||||| || |||||||||||||||||||||||| |||||
Sbjct: 68 cacgcataaggtgctattcatgttttatcatctaatatcaata 110
>RF01062;MIR812;AP005542.3/6333-6174 39947:Oryza sativa Japonica
Group
Length = 160
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||| ||||| |||||||||| |||| ||||||||||||||||||||||||
Sbjct: 48 aaaaaattagtcatgcataaagtattatttatgttttatcatctaataacaata 101
>RF01062;MIR812;DQ280674.1/7188-7361 4529:Oryza rufipogon
Length = 174
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 97 aaaaaataagtcaggcataaagtactattcatgttttatcatctaataacaata 150
||||||| ||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 60 aaaaaattagtcacacataaagtaatattcatgttttatcatctaataacaata 113
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 50 caacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||| ||||||||||||||
Sbjct: 163 caacgtttgaccgttcgtcttatttgaaa 135
>RF01058;MIR806;AP003616.4/59947-60190 39947:Oryza sativa Japonica
Group
Length = 244
Score = 75.8 bits (38), Expect = 3e-13
Identities = 97/117 (82%), Gaps = 3/117 (2%)
Strand = Plus / Minus
Query: 50 caacgtttgaccgtccgtcttatttgaaacaattatgaannnnnnnnaaaaaataagtca 109
||||||||||||||||||||||||||||| | |||| || ||| | | |||||
Sbjct: 197 caacgtttgaccgtccgtcttatttgaaaaatttat-aaaaaattaaaaacatttagtca 139
Query: 110 ggcataaagtactattcatgttttatcatctaataacaatataaaaatacaaatcat 166
||||||||||||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 138 cacataaagtactattcatgttttatcatctaatagca--ataaaaatactaatcat 84
Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 50 caacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||||||||||||||||||
Sbjct: 48 caacgtttgaccgtccgtcttatttgaaa 76
>RF01062;MIR812;AACV01019813.1/5059-4888 39947:Oryza sativa Japonica
Group
Length = 172
Score = 73.8 bits (37), Expect = 1e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 114 taaagtactattcatgttttatcatctaataacaata 150
|||||||||||||||||||||||||||||||||||||
Sbjct: 76 taaagtactattcatgttttatcatctaataacaata 112
>RF01062;MIR812;AAAA02030744.1/37877-38042 39946:Oryza sativa
Indica Group
Length = 166
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 40 tttccgtgtccaacgtttgaccgtccgtcttatttgaaacaatta 84
||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 2 tttccgtgtccaacgtttgaccgtccgtcttatttaaaaaaatta 46
>RF01062;MIR812;AP008213.1/23009525-23009694 39947:Oryza sativa
Japonica Group
Length = 170
Score = 73.8 bits (37), Expect = 1e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 42 tccgtgtccaacgtttgaccgtccgtcttatttgaaa 78
|||||||||||||||||||||||||||||||||||||
Sbjct: 4 tccgtgtccaacgtttgaccgtccgtcttatttgaaa 40
