miRNEST 2.0, an integrative microRNA resource :: BLAST
>48497_ghr-miR171:pmrd
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 3 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 63 tctcagattgagccgcgccaatatc 87
|||||||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatc 85
>52331_ptc-miRf10509-akr:pmrd
Length = 99
Score = 97.6 bits (49), Expect = 1e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
||||||||||||||||||||||||||||||||||||| | | | | |||||||||
Sbjct: 6 gcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatac 65
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 66 gatctcagattgagccgcgccaatatcac 94
>51686_ptc-miR171c:pmrd
Length = 104
Score = 97.6 bits (49), Expect = 1e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
||||||||||||||||||||||||||||||||||||| | | | | |||||||||
Sbjct: 9 gcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatac 68
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 69 gatctcagattgagccgcgccaatatcac 97
>54832_vvi-miR171e:pmrd
Length = 103
Score = 91.7 bits (46), Expect = 8e-20
Identities = 78/89 (87%), Gaps = 6/89 (6%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
|||||||||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct: 10 gcgatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaac 63
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||| ||||||||||||||||||||||
Sbjct: 64 gatctctgattgagccgcgccaatatcac 92
>54554_sly-miR171d:pmrd
Length = 112
Score = 77.8 bits (39), Expect = 1e-15
Identities = 78/89 (87%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
|||||||||||||||||||||||||||||| ||||| | | ||| ||||||| ||
Sbjct: 10 gcgatgttggtgaggttcaatccgaagacgaatttatg--cttatt--ttcgtaaagaac 65
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 66 gatctcagattgagccgcgccaatatcac 94
>52488_ptc-miRf10666-akr:pmrd
Length = 93
Score = 69.9 bits (35), Expect = 3e-13
Identities = 77/89 (86%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
||||||||||||||||||||||||||||| ||||||| || | | ||||||| |
Sbjct: 5 gcgatgttggtgaggttcaatccgaagacagatttacac---gagtgaaa-gtaaaatcc 60
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 61 gatctcagattgagccgcgccaatatcac 89
>51687_ptc-miR171d:pmrd
Length = 100
Score = 69.9 bits (35), Expect = 3e-13
Identities = 77/89 (86%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
||||||||||||||||||||||||||||| ||||||| || | | ||||||| |
Sbjct: 9 gcgatgttggtgaggttcaatccgaagacagatttacac---gagtgaaa-gtaaaatcc 64
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 65 gatctcagattgagccgcgccaatatcac 93
>54833_vvi-miR171f:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatatcac 92
>51383_ppt-miR171b:pmrd
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 ctcagattgagccgcgccaatatcac 89
||||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcac 86
>51382_ppt-miR171a:pmrd
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 tcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatcac 85
>54582_smo-miR171d:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 63 tctcagattgagccgcgccaatatcac 89
||||| |||||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatcac 91
>54553_sly-miR171c:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatcac 89
||||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatcac 100
>54461_sbi-miR171j:pmrd
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatcac 89
||||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatcac 105
>54667_stu-miR171:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatca 88
|||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatca 22
>54666_stu-miR170:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatca 88
|||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatca 22
>48895_osa-miR171a:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccga 25
||||| |||||||||||||||||||
Sbjct: 8 gcgatattggtgaggttcaatccga 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>55028_zma-miR171a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>55027_zma-miR170p:pmrd
Length = 62
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 43 gattgagccgcgccaatatc 62
>54910_zel-miR171:pmrd
Length = 65
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>54458_sbi-miR171g:pmrd
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>54451_sbi-miR170:pmrd
Length = 55
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 36 gattgagccgcgccaatatc 55
>51694_ptc-miR171k:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>51342_ppd-miR170:pmrd
Length = 297
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 278 gattgagccgcgccaatatc 297
>48636_gra-miR171:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>48569_gma-miR171m:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 153 gattgagccgcgccaatatc 172
>48484_gcl-miR171:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 186 gattgagccgcgccaatatc 205
>48407_bra-miR171e:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>48369_bna-miR171g:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatc 98
>48368_bna-miR171f:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>48313_bdi-miR171d:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 82 gattgagccgcgccaatatc 101
>48311_bdi-miR171a:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>46982_ath-miR171o:pmrd
Length = 339
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 320 gattgagccgcgccaatatc 339
>46981_ath-miR171n:pmrd
Length = 461
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46980_ath-miR171m:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 73 gattgagccgcgccaatatc 92
>46977_ath-miR171a:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>46976_ath-miR170n:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 153 gattgagccgcgccaatatc 172
>46975_ath-miR170m:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 73 gattgagccgcgccaatatc 92
>46853_ace-miR171c:pmrd
Length = 216
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 197 gattgagccgcgccaatatc 216
>46852_ace-miR171b:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 196 gattgagccgcgccaatatc 215
>46851_ace-miR171a:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46850_ace-miR170d:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 196 gattgagccgcgccaatatc 215
>46849_ace-miR170c:pmrd
Length = 55
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46848_ace-miR170b:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 57 gattgagccgcgccaatatc 76
>46847_ace-miR170a:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
