miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48847_osa-miR166d:pmrd
Length = 125
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggtgcatggagaaacctctgatcgatcaggtttgatctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 ggaatgttgtctggctcgaggtgcatggagaaacctctgatcgatcaggtttgatctgta 80
Query: 61 gagactgatctcggaccaggcttcattcc 89
|||||||||||||||||||||||||||||
Sbjct: 81 gagactgatctcggaccaggcttcattcc 109
>51639_ptc-miR166o:pmrd
Length = 324
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 actgatctcggaccaggcttcattcc 89
||||||||||||||||||||||||||
Sbjct: 289 actgatctcggaccaggcttcattcc 314
>54972_zma-miR166p:pmrd
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggtgca 25
|||||||||||||||||||||||||
Sbjct: 7 ggaatgttgtctggctcgaggtgca 31
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 67 gatctcggaccaggcttcattcc 89
>54970_zma-miR166n:pmrd
Length = 96
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggtgca 25
|||||||||||||||||||||||||
Sbjct: 5 ggaatgttgtctggctcgaggtgca 29
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tgatctcggaccaggcttcattcc 89
||||||||||||||||||||||||
Sbjct: 69 tgatctcggaccaggcttcattcc 92
>54961_zma-miR166e:pmrd
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggtgca 25
|||||||||||||||||||||||||
Sbjct: 3 ggaatgttgtctggctcgaggtgca 27
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 63 gatctcggaccaggcttcattcc 85
>54959_zma-miR166c:pmrd
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggtgca 25
|||||||||||||||||||||||||
Sbjct: 3 ggaatgttgtctggctcgaggtgca 27
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tgatctcggaccaggcttcattcc 89
||||||||||||||||||||||||
Sbjct: 67 tgatctcggaccaggcttcattcc 90
>54419_sbi-miR166d:pmrd
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggtgca 25
|||||||||||||||||||||||||
Sbjct: 3 ggaatgttgtctggctcgaggtgca 27
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tgatctcggaccaggcttcattcc 89
||||||||||||||||||||||||
Sbjct: 62 tgatctcggaccaggcttcattcc 85
>48713_mtr-miR166c:pmrd
Length = 171
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 61 gagactgatctcggaccaggcttcattcc 89
|||| ||||||||||||||||||||||||
Sbjct: 141 gagagtgatctcggaccaggcttcattcc 169
>48711_mtr-miR165:pmrd
Length = 82
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 61 gagactgatctcggaccaggcttcattcc 89
|||| ||||||||||||||||||||||||
Sbjct: 52 gagaatgatctcggaccaggcttcattcc 80
>54973_zma-miR166q:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 gaatgttgtctggctcgaggtgca 25
||||||||||||||||||||||||
Sbjct: 6 gaatgttgtctggctcgaggtgca 29
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 65 gatctcggaccaggcttcattcc 87
>54796_vvi-miR166h:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tgatctcggaccaggcttcattcc 89
||||||||||||||||||||||||
Sbjct: 64 tgatctcggaccaggcttcattcc 87
>54789_vvi-miR166a:pmrd
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tgatctcggaccaggcttcattcc 89
||||||||||||||||||||||||
Sbjct: 95 tgatctcggaccaggcttcattcc 118
>51638_ptc-miR166n:pmrd
Length = 331
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tgatctcggaccaggcttcattcc 89
||||||||||||||||||||||||
Sbjct: 298 tgatctcggaccaggcttcattcc 321
>51632_ptc-miR166h:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tgatctcggaccaggcttcattcc 89
||||||||||||||||||||||||
Sbjct: 67 tgatctcggaccaggcttcattcc 90
>51631_ptc-miR166g:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 tgatctcggaccaggcttcattcc 89
||||||||||||||||||||||||
Sbjct: 69 tgatctcggaccaggcttcattcc 92
>54968_zma-miR166l:pmrd
Length = 137
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 94 gatctcggaccaggcttcattcc 116
>54960_zma-miR166d:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 80 gatctcggaccaggcttcattcc 102
>54958_zma-miR166b:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 92 gatctcggaccaggcttcattcc 114
>54957_zma-miR166a:pmrd
Length = 213
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 185 gatctcggaccaggcttcattcc 207
>54423_sbi-miR166h:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 158 gatctcggaccaggcttcattcc 180
>54416_sbi-miR166a:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 84 gatctcggaccaggcttcattcc 106
>48850_osa-miR166g:pmrd
Length = 145
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 111 gatctcggaccaggcttcattcc 133
>48845_osa-miR166b:pmrd
Length = 206
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 164 gatctcggaccaggcttcattcc 186
>48844_osa-miR166a:pmrd
Length = 145
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 106 gatctcggaccaggcttcattcc 128
>46868_aqc-miR166c:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 gatctcggaccaggcttcattcc 89
|||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattcc 107
>54544_sly-miR166b:pmrd
Length = 201
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggt 22
||||||||||||||||||||||
Sbjct: 39 ggaatgttgtctggctcgaggt 60
>54379_pvu-miR166:pmrd
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggt 22
||||||||||||||||||||||
Sbjct: 11 ggaatgttgtctggctcgaggt 32
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 112 tctcggaccaggcttcattcc 132
>52336_ptc-miRf10514-akr:pmrd
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggt 22
||||||||||||||||||||||
Sbjct: 8 ggaatgttgtctggctcgaggt 29
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 117 tctcggaccaggcttcattcc 137
>51641_ptc-miR166q:pmrd
Length = 151
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggt 22
||||||||||||||||||||||
Sbjct: 12 ggaatgttgtctggctcgaggt 33
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 121 tctcggaccaggcttcattcc 141
>51625_ptc-miR166a:pmrd
Length = 164
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggt 22
||||||||||||||||||||||
Sbjct: 13 ggaatgttgtctggctcgaggt 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 tgatctcggaccaggcttcattcc 89
|||| |||||||||||||||||||
Sbjct: 130 tgatgtcggaccaggcttcattcc 153
>51336_pga-miR166:pmrd
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 atctcggaccaggcttcattcc 89
||||||||||||||||||||||
Sbjct: 29 atctcggaccaggcttcattcc 50
>48789_nsy-miR166:pmrd
Length = 187
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggt 22
||||||||||||||||||||||
Sbjct: 6 ggaatgttgtctggctcgaggt 27
>48549_gma-miR166b:pmrd
Length = 167
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgaggt 22
||||||||||||||||||||||
Sbjct: 23 ggaatgttgtctggctcgaggt 44
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 126 tctcggaccaggcttcattcc 146
>54974_zma-miR166r:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 61 tctcggaccaggcttcattcc 81
>54971_zma-miR166o:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 67 tctcggaccaggcttcattcc 87
>54965_zma-miR166i:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 61 tctcggaccaggcttcattcc 81
>54793_vvi-miR166e:pmrd
Length = 166
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagg 21
|||||||||||||||||||||
Sbjct: 12 ggaatgttgtctggctcgagg 32
>54791_vvi-miR166c:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagg 21
|||||||||||||||||||||
Sbjct: 12 ggaatgttgtctggctcgagg 32
>54577_smo-miR166b:pmrd
Length = 136
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 97 tctcggaccaggcttcattcc 117
>54576_smo-miR166a:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 106 tctcggaccaggcttcattcc 126
>54426_sbi-miR166k:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 81 tctcggaccaggcttcattcc 101
>54424_sbi-miR166i:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 64 tctcggaccaggcttcattcc 84
>52289_ptc-miRf10467-akr:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 ggaatgttgtctggctcgagg 21
|||||||||||||||||||||
Sbjct: 117 ggaatgttgtctggctcgagg 97
>52014_ptc-miRf10192-akr:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagg 21
|||||||||||||||||||||
Sbjct: 7 ggaatgttgtctggctcgagg 27
>51637_ptc-miR166m:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattcc 94
>51635_ptc-miR166k:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagg 21
|||||||||||||||||||||
Sbjct: 13 ggaatgttgtctggctcgagg 33
>51634_ptc-miR166j:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagg 21
|||||||||||||||||||||
Sbjct: 13 ggaatgttgtctggctcgagg 33
>51627_ptc-miR166c:pmrd
Length = 134
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagg 21
|||||||||||||||||||||
Sbjct: 13 ggaatgttgtctggctcgagg 33
>48849_osa-miR166f:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcc 90
>48714_mtr-miR166d:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagg 21
|||||||||||||||||||||
Sbjct: 3 ggaatgttgtctggctcgagg 23
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattcc 95
>48552_gma-miR166q:pmrd
Length = 156
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 134 tctcggaccaggcttcattcc 154
>48548_gma-miR166a:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagg 21
|||||||||||||||||||||
Sbjct: 23 ggaatgttgtctggctcgagg 43
>48427_cpt-miR166:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagg 21
|||||||||||||||||||||
Sbjct: 12 ggaatgttgtctggctcgagg 32
>48345_bna-miR166d:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattcc 95
>46951_ath-miR166g:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 83 tctcggaccaggcttcattcc 103
>46948_ath-miR166d:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 85 tctcggaccaggcttcattcc 105
>46947_ath-miR166c:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctcggaccaggcttcattcc 89
|||||||||||||||||||||
Sbjct: 101 tctcggaccaggcttcattcc 121
