miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49517_osa-miRf10302-akr:pmrd
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 87 gtgtcccatccagtataaagttgctatattttgggacgga 126
||||||||||||||| || |||||||||||||||||||||
Sbjct: 53 gtgtcccatccagtacaaggttgctatattttgggacgga 14
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 aatactccctccatctcaaaatatagcaa 51
|||||||||||| || |||||||||||||
Sbjct: 5 aatactccctccgtcccaaaatatagcaa 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 24 atactccctccatctcaaaatatagcaa 51
||||||||||| || |||||||||||||
Sbjct: 98 atactccctccgtcccaaaatatagcaa 71
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 107 ttgctatattttgggacgga 126
||||||||||||||||||||
Sbjct: 71 ttgctatattttgggacgga 90
>50995_osa-miRf11780-akr:pmrd
Length = 116
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 87 gtgtcccatccagtataaagttgctatattttgggacgga 126
||||||||||||||| || ||||||||||||| |||||||
Sbjct: 48 gtgtcccatccagtacaaggttgctatatttttggacgga 9
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 95 tccagtataaagttgctatattttgggacgga 126
||||||| || ||||||||||||||| |||||
Sbjct: 77 tccagtacaaggttgctatattttggaacgga 108
>49958_osa-miRf10743-akr:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 106 gttgctatattttgggacgga 126
|||||||||||||||||||||
Sbjct: 83 gttgctatattttgggacgga 103
>49957_osa-miRf10742-akr:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 106 gttgctatattttgggacgga 126
|||||||||||||||||||||
Sbjct: 44 gttgctatattttgggacgga 24
>49366_osa-miRf10151-akr:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 103 aaagttgctatattttgggacgga 126
||||| ||||||||||||||||||
Sbjct: 34 aaagtggctatattttgggacgga 11
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 103 aaagttgctatattttgggacgga 126
||||| ||||||||||||||||||
Sbjct: 49 aaagtggctatattttgggacgga 72
>49357_osa-miRf10142-akr:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 62 ataagatgtgtcacatccag 81
||||||||||||||||||||
Sbjct: 44 ataagatgtgtcacatccag 25
>49356_osa-miRf10141-akr:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 62 ataagatgtgtcacatccag 81
||||||||||||||||||||
Sbjct: 51 ataagatgtgtcacatccag 32
>49314_osa-miRf10099-akr:pmrd
Length = 144
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 107 ttgctatattttgggacgga 126
||||||||||||||||||||
Sbjct: 40 ttgctatattttgggacgga 21
