miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02007218.1/59330-59175 39946:Oryza sativa
Indica Group
Length = 156
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 87 gtgtcccatccagtataaagttgctatattttgggacgga 126
|||||||||||||||||| |||||||||||||||||||||
Sbjct: 51 gtgtcccatccagtataaggttgctatattttgggacgga 12
>RF00906;MIR1122;AP008218.1/18423778-18423640 39947:Oryza sativa
Japonica Group
Length = 139
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 87 gtgtcccatccagtataaagttgctatattttgggacgga 126
||||||||||||||||||| |||||||||||||| |||||
Sbjct: 51 gtgtcccatccagtataaaattgctatattttggaacgga 12
>RF00906;MIR1122;AAAA02007660.1/3740-3838 39946:Oryza sativa Indica
Group
Length = 99
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 87 gtgtcccatccagtataaagttgctatattttgggacgga 126
||||||||||||||| || |||||||||||||||||||||
Sbjct: 49 gtgtcccatccagtacaaggttgctatattttgggacgga 88
>RF00906;MIR1122;AACV01011889.1/2622-2752 39947:Oryza sativa
Japonica Group
Length = 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 86 cgtgtcccatccagtataaagttgctatattttgggacgga 126
||||||||||||||||||| |||||||||||||| |||||
Sbjct: 52 cgtgtcccatccagtataagattgctatattttggtacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 88 tgtcccatccagtataaagttgctatattttgggacggatgga 130
||||||||||| || || ||||||||||||| ||| |||||||
Sbjct: 82 tgtcccatccaatacaaggttgctatattttaggatggatgga 124
>RF00906;MIR1122;AAAA02013097.1/8926-9081 39946:Oryza sativa Indica
Group
Length = 156
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 90 tcccatccagtataaagttgctatattttgggacgga 126
|||||||||||| ||||||| ||||||||||||||||
Sbjct: 48 tcccatccagtacaaagttgttatattttgggacgga 12
>RF00906;MIR1122;AY947286.1/128-10 4530:Oryza sativa (rice)
Length = 119
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 103 aaagttgctatattttgggacggatggactaat 135
|||||||||||||||||||||||||||| ||||
Sbjct: 85 aaagttgctatattttgggacggatggagtaat 117
>RF00906;MIR1122;AAAA02027999.1/6846-6708 39946:Oryza sativa Indica
Group
Length = 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 103 aaagttgctatattttgggacggatgga 130
||||||||||||||||||||||||||||
Sbjct: 35 aaagttgctatattttgggacggatgga 8
>RF00906;MIR1122;AL663019.2/125395-125517 39947:Oryza sativa
Japonica Group
Length = 123
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 103 aaagttgctatattttgggacggatgga 130
||||||||||||||||||||||||||||
Sbjct: 35 aaagttgctatattttgggacggatgga 8
>RF00906;MIR1122;AAAA02026264.1/30762-30856 39946:Oryza sativa
Indica Group
Length = 95
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 87 gtgtcccatccagtataaagttgctatattttgggacgga 126
|||||| ||||||||||| | |||||||||||||||||||
Sbjct: 51 gtgtcctatccagtataaggctgctatattttgggacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 93 catccagtataaagttgctatattttgggac 123
|||||||||||| |||||||| |||||||||
Sbjct: 51 catccagtataaggttgctattttttgggac 81
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 87 gtgtcccatccagtataaagttgctatattttgggacgga 126
||||| ||||||||| || |||||||||||||||||||||
Sbjct: 106 gtgtctcatccagtacaaggttgctatattttgggacgga 145
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 87 gtgtcccatccagtataaagttgctatattttgg 120
||||||||||||||| || |||||||||||||||
Sbjct: 51 gtgtcccatccagtacaaggttgctatattttgg 18
>RF00906;MIR1122;AP008217.1/23244951-23245072 39947:Oryza sativa
Japonica Group
Length = 122
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 87 gtgtcccatccagtataaagttgctatattttgggacgga 126
||||||||||||||| || ||||||||||||| |||||||
Sbjct: 51 gtgtcccatccagtacaaggttgctatatttttggacgga 12
>RF00906;MIR1122;AAAA02016710.1/2442-2572 39946:Oryza sativa Indica
Group
Length = 131
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 88 tgtcccatccagtataaagttgctatattttgggacgga 126
||||||||||||||||| |||||||||||||| |||||
Sbjct: 50 tgtcccatccagtataagattgctatattttggtacgga 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 88 tgtcccatccagtataaagttgctatatttt 118
|||||||||||||| || |||||||||||||
Sbjct: 82 tgtcccatccagtacaaggttgctatatttt 112
>RF00906;MIR1122;AACV01008275.1/11041-11180 39947:Oryza sativa
Japonica Group
Length = 140
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 88 tgtcccatccagtataaagttgctatattttgggacgga 126
||||||||||||||||| |||| |||||||||| |||||
Sbjct: 50 tgtcccatccagtataaggttgatatattttggaacgga 12
>RF00906;MIR1122;AP003684.3/140140-140272 39947:Oryza sativa
Japonica Group
Length = 133
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 88 tgtcccatccagtataaagttgctatattttgggacggatgga 130
||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 50 tgtcccatccagttctaagttgctatattatgggacggatgga 8
>RF00906;MIR1122;AAAA02007712.1/608-473 39946:Oryza sativa Indica
Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 89 gtcccatccagtataaagttgctatattttgggacgga 126
||||||||||||| ||||||||||||||| |||||||
Sbjct: 49 gtcccatccagtactaagttgctatattttaggacgga 12
>RF00906;MIR1122;AACV01007111.1/2148-2260 39947:Oryza sativa
Japonica Group
Length = 113
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 103 aaagttgctatattttgggacggatg 128
||||||||||||||||||||||||||
Sbjct: 79 aaagttgctatattttgggacggatg 104
>RF00906;MIR1122;AP008216.1/16113535-16113433 39947:Oryza sativa
Japonica Group
Length = 103
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 23 aatactccctccatctcaaaatatagcaa 51
||||||||||||||| |||||||||||||
Sbjct: 101 aatactccctccatcccaaaatatagcaa 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 87 gtgtcccatccagtataaagttgctatattttggga 122
||||||||||||||| || ||||||||||||||||
Sbjct: 53 gtgtcccatccagtacaagattgctatattttggga 88
>RF00906;MIR1122;CR855136.1/20944-20809 4530:Oryza sativa (rice)
Length = 136
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 25 tactccctccatctcaaaatatagcaaatttatacta 61
|||||||||| |||||||||||| ||||| |||||||
Sbjct: 132 tactccctccgtctcaaaatataacaaatatatacta 96
>RF00906;MIR1122;AP008217.1/10919176-10919047 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 106 gttgctatattttgggacggatgga 130
|||||||||||||||||||||||||
Sbjct: 32 gttgctatattttgggacggatgga 8
>RF00906;MIR1122;AAAA02002553.1/2264-2375 39946:Oryza sativa Indica
Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 103 aaagttgctatattttgggacgga 126
||||||||||||||||||||||||
Sbjct: 78 aaagttgctatattttgggacgga 101
>RF00906;MIR1122;AAAA02005537.1/4098-4188 39946:Oryza sativa Indica
Group
Length = 91
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 106 gttgctatattttgggacggatggactaatta 137
||||||||||||||||||||| ||| ||||||
Sbjct: 60 gttgctatattttgggacggagggagtaatta 91
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa Indica
Group
Length = 149
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 103 aaagttgctatattttgggacgga 126
||||||||||||||||||||||||
Sbjct: 35 aaagttgctatattttgggacgga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 103 aaagttgctatattttgggacgga 126
||||||||||||||||||||||||
Sbjct: 115 aaagttgctatattttgggacgga 138
>RF00906;MIR1122;AACV01003595.1/38638-38749 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 103 aaagttgctatattttgggacgga 126
||||||||||||||||||||||||
Sbjct: 78 aaagttgctatattttgggacgga 101
>RF00906;MIR1122;AAAA02024386.1/33092-33187 39946:Oryza sativa
Indica Group
Length = 96
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 103 aaagttgctatattttgggacgga 126
||||||||||||||||||||||||
Sbjct: 35 aaagttgctatattttgggacgga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 103 aaagttgctatattttgggacgga 126
||||||||||||||||||||||||
Sbjct: 62 aaagttgctatattttgggacgga 85
>RF00906;MIR1122;AP008208.1/9514407-9514515 39947:Oryza sativa
Japonica Group
Length = 109
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 21 taaatactccctccatctcaaaatatag 48
||||||||||||||||| ||||||||||
Sbjct: 109 taaatactccctccatcccaaaatatag 82
>RF00906;MIR1122;AAAA02034525.1/2762-2656 39946:Oryza sativa Indica
Group
Length = 107
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 23 aatactccctccatctcaaaatatagca 50
||||||||||||||| ||||||||||||
Sbjct: 105 aatactccctccatcccaaaatatagca 78
>RF00906;MIR1122;AC145396.3/122873-122984 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 103 aaagttgctatattttgggacgga 126
||||||||||||||||||||||||
Sbjct: 78 aaagttgctatattttgggacgga 101
>RF00906;MIR1122;AACV01017910.1/30212-30123 39947:Oryza sativa
Japonica Group
Length = 90
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 103 aaagttgctatattttgggacgga 126
||||||||||||||||||||||||
Sbjct: 35 aaagttgctatattttgggacgga 12
>RF00906;MIR1122;AAAA02005682.1/11197-11089 39946:Oryza sativa
Indica Group
Length = 109
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 21 taaatactccctccatctcaaaatatag 48
||||||||||||||||| ||||||||||
Sbjct: 1 taaatactccctccatcccaaaatatag 28
>RF00906;MIR1122;AC137593.2/94685-94531 39947:Oryza sativa Japonica
Group
Length = 155
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 87 gtgtcccatccagtataaagttgctatattttgggacgga 126
||||| ||||| ||| || |||||||||||||||||||||
Sbjct: 105 gtgtctcatccggtacaaggttgctatattttgggacgga 144
>RF00906;MIR1122;AAAA02015438.1/12525-12421 39946:Oryza sativa
Indica Group
Length = 105
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 103 aaagttgctatattttgggacgga 126
||||||||||||||||||||||||
Sbjct: 35 aaagttgctatattttgggacgga 12
>RF00906;MIR1122;AAAA02018512.1/8556-8445 39946:Oryza sativa Indica
Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 103 aaagttgctatattttgggacgga 126
||||||||||||||||||||||||
Sbjct: 35 aaagttgctatattttgggacgga 12
>RF01058;MIR806;AAAA02017657.1/5337-5097 39946:Oryza sativa Indica
Group
Length = 241
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 atactccctccatctcaaaatat 46
|||||||||||||||||||||||
Sbjct: 1 atactccctccatctcaaaatat 23
>RF00906;MIR1122;AAAA02031697.1/13340-13228 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 88 tgtcccatccagtataaagttgctatattttgggacgga 126
||||| |||||||| | |||||||||||||||||||||
Sbjct: 64 tgtcctatccagtactaggttgctatattttgggacgga 102
>RF00906;MIR1122;AP008212.1/21312652-21312767 39947:Oryza sativa
Japonica Group
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 88 tgtcccatccagtataaagttgctatattttgggacgga 126
|||||||||||||| | ||||||||||||||||||||
Sbjct: 44 tgtcccatccagtactagattgctatattttgggacgga 6
>RF00906;MIR1122;AP005867.2/149892-149976 39947:Oryza sativa
Japonica Group
Length = 85
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 25 tactccctccatctcaaaatata 47
|||||||||||||||||||||||
Sbjct: 81 tactccctccatctcaaaatata 59
>RF00906;MIR1122;AP008210.1/30933575-30933686 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 104 aagttgctatattttgggacgga 126
|||||||||||||||||||||||
Sbjct: 34 aagttgctatattttgggacgga 12
>RF00906;MIR1122;AACV01002208.1/17153-17286 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 25 tactccctccatctcaaaatatagcaa 51
|||||||||| ||||||||||||||||
Sbjct: 130 tactccctccgtctcaaaatatagcaa 104
>RF00906;MIR1122;AAAA02012151.1/19064-18908 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 104 aagttgctatattttgggacgga 126
|||||||||||||||||||||||
Sbjct: 124 aagttgctatattttgggacgga 146
>RF00906;MIR1122;AACV01006536.1/39247-39091 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 25 tactccctccatctcaaaatatagcaa 51
|||||||||||||||| ||||||||||
Sbjct: 153 tactccctccatctcataatatagcaa 127
>RF00906;MIR1122;AP008210.1/24125321-24125446 39947:Oryza sativa
Japonica Group
Length = 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 tactccctccatctcaaaatatagcaa 51
||||||||||||| |||||||||||||
Sbjct: 5 tactccctccatcccaaaatatagcaa 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 25 tactccctccatctcaaaatatagcaa 51
||||||||||||| |||||||||||||
Sbjct: 122 tactccctccatcccaaaatatagcaa 96
>RF00906;MIR1122;AP008213.1/29571801-29571647 39947:Oryza sativa
Japonica Group
Length = 155
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 88 tgtcccatccagtataaagttgctatattttgggacgga 126
||||| ||||||| | | |||||||||||||||||||||
Sbjct: 106 tgtcctatccagtcttaggttgctatattttgggacgga 144
>RF00906;MIR1122;AC107206.4/43527-43372 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 tactccctccatctcaaaatatagcaa 51
||||||||||||| |||||||||||||
Sbjct: 5 tactccctccatcccaaaatatagcaa 31
>RF01058;MIR806;AAAA02010444.1/14858-14617 39946:Oryza sativa
Indica Group
Length = 242
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 tactccctccatctcaaaatat 46
||||||||||||||||||||||
Sbjct: 2 tactccctccatctcaaaatat 23
>RF00906;MIR1122;AC174352.7/5727-5571 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 23 aatactccctccatctcaaaatat-agcaaattt 55
|||||||||||| ||||||||||| |||||||||
Sbjct: 155 aatactccctccgtctcaaaatataagcaaattt 122
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 atactccctccatctcaaaata 45
||||||||||||||||||||||
Sbjct: 4 atactccctccatctcaaaata 25
>RF00906;MIR1122;AAAA02014858.1/37527-37621 39946:Oryza sativa
Indica Group
Length = 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 aaatactccctccatctcaaaatata 47
|||||||||||||||| |||||||||
Sbjct: 94 aaatactccctccatcccaaaatata 69
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 22 aaatactccctccatctcaaaatatagcaa 51
||||||||||||| || |||||||||||||
Sbjct: 161 aaatactccctccgtcccaaaatatagcaa 132
>RF00906;MIR1122;AAAA02017206.1/17057-17207 39946:Oryza sativa
Indica Group
Length = 151
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 106 gttgctatattttgggacggatggactaat 135
||||||||||| ||||||||||||| ||||
Sbjct: 120 gttgctatattatgggacggatggagtaat 149
>RF00906;MIR1122;AP002972.3/107404-107293 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 103 aaagttgctatattttgggacggatg 128
|||||||||||||||| |||||||||
Sbjct: 78 aaagttgctatattttaggacggatg 103
>RF00906;MIR1122;AC210489.1/47612-47477 4538:Oryza glaberrima
(African rice)
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 89 gtcccatccagtataaagttgctatattttgggacgga 126
|||||||||||| ||||||||||||||| |||||||
Sbjct: 49 gtcccatccagtcctaagttgctatattttaggacgga 12
>RF00906;MIR1122;AACV01012172.1/17743-17893 39947:Oryza sativa
Japonica Group
Length = 151
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 106 gttgctatattttgggacggatggactaat 135
||||||||||| ||||||||||||| ||||
Sbjct: 120 gttgctatattatgggacggatggagtaat 149
>RF00906;MIR1122;AP008217.1/4273192-4273317 39947:Oryza sativa
Japonica Group
Length = 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 87 gtgtcccatccagtataaagttgctatatt 116
||||||||||||||| || |||||||||||
Sbjct: 30 gtgtcccatccagtacaaggttgctatatt 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 gtgtcccatccagtataaagttgctatatt 116
||||||||||||||| || |||||||||||
Sbjct: 97 gtgtcccatccagtacaaggttgctatatt 126
>RF00906;MIR1122;AP005832.2/107472-107603 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 ataagatgtgtcacatccagta 83
||||||||||||||||||||||
Sbjct: 75 ataagatgtgtcacatccagta 96
>RF00906;MIR1122;AP008217.1/18229594-18229693 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 90 tcccatccagtataaagttgctatattttgggac 123
||||||||||| | | ||||||||||||||||||
Sbjct: 48 tcccatccagtcttaggttgctatattttgggac 15
>RF00906;MIR1122;AP008208.1/33146448-33146543 39947:Oryza sativa
Japonica Group
Length = 96
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 93 catccagtataaagttgctatattttgggacgga 126
||||||||| || ||||||||||||||||||||
Sbjct: 45 catccagtacaagattgctatattttgggacgga 12
>RF00906;MIR1122;AAAA02004209.1/3478-3367 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 103 aaagttgctatattttgggacggatg 128
||||||| ||||||||||||||||||
Sbjct: 78 aaagttgttatattttgggacggatg 103
>RF00906;MIR1122;AL512546.2/55731-55825 4530:Oryza sativa (rice)
Length = 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 aaatactccctccatctcaaaatata 47
|||||||||||||||| |||||||||
Sbjct: 94 aaatactccctccatcccaaaatata 69
>RF00906;MIR1122;AP008207.1/298223-298350 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 106 gttgctatattttgggacggatggactaat 135
||||||||||| ||||||||||||| ||||
Sbjct: 97 gttgctatattctgggacggatggagtaat 126
>RF00906;MIR1122;AAAA02001100.1/19725-19807 39946:Oryza sativa
Indica Group
Length = 83
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 atactccctccatctcaaaatatagc 49
|||||||||||||| |||||||||||
Sbjct: 80 atactccctccatcccaaaatatagc 55
