miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>44824_miR396:micropc
Length = 93
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaacttcccgatcgggagtgttggcgacagatcgcaccgctaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttccacggctttcttgaacttcccgatcgggagtgttggcgacagatcgcaccgctaaca 60
Query: 61 gatccgcatacgaagctcaagaaagccgtggga 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 gatccgcatacgaagctcaagaaagccgtggga 93
>46651_miR396:micropc
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 79/97 (81%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaacttcc----cgatcgggagtgttggcgacagatcgcaccgct 56
||||||||||||||||||||| | ||||| || |||||||| | ||||||| || |
Sbjct: 1 ttccacggctttcttgaacttacttcacgatcaggtctgttggcggccgatcgcatcgat 60
Query: 57 aacagatccgcatacgaagctcaagaaagccgtggga 93
|||||||||| | ||| |||||||||||||||||
Sbjct: 61 aacagatccgggtgacaagatcaagaaagccgtggga 97
>45080_miR396:micropc
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 79/97 (81%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaacttcc----cgatcgggagtgttggcgacagatcgcaccgct 56
||||||||||||||||||||| | ||||| || |||||||| | ||||||| || |
Sbjct: 1 ttccacggctttcttgaacttacttcacgatcaggtctgttggcggccgatcgcatcgat 60
Query: 57 aacagatccgcatacgaagctcaagaaagccgtggga 93
|||||||||| | ||| |||||||||||||||||
Sbjct: 61 aacagatccgggtgacaagatcaagaaagccgtggga 97
>46804_miR396:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacggctttcttgaact 20
>46469_miR396:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacggctttcttgaact 20
>46290_miR396:micropc
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacggctttcttgaact 20
>46087_miR396:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacggctttcttgaact 20
>45423_miR396:micropc
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacggctttcttgaact 20
>45341_miR396:micropc
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacggctttcttgaact 20
