miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00648;MIR396;AARH01001850.1/327743-327639 3694:Populus
          trichocarpa
          Length = 105

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttccacggctttcttgaacttc 22
          ||||||||||||||||||||||
Sbjct: 11 ttccacggctttcttgaacttc 32




>RF00648;MIR396;AARH01002977.1/33014-32858 3694:Populus trichocarpa
          Length = 157

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 72  gaagctcaagaaagccgtggga 93
           ||||||||||||||||||||||
Sbjct: 125 gaagctcaagaaagccgtggga 146




>RF00648;MIR396;AP010531.1/73143-73036 34305:Lotus japonicus
          Length = 108

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 72 gaagctcaagaaagccgtggga 93
          ||||||||||||||||||||||
Sbjct: 76 gaagctcaagaaagccgtggga 97