miRNEST 2.0, an integrative microRNA resource :: BLAST
>49026_osa-miR806c:pmrd
Length = 270
Score = 139 bits (70), Expect = 1e-33
Identities = 189/228 (82%), Gaps = 4/228 (1%)
Strand = Plus / Minus
Query: 14 ttcgaaatgttggacaccgtggacttcttataacaagtgtgaccctttatcttagtnaan 73
||||||||||| |||||||| ||||| ||| ||| || ||||| || ||||| | ||
Sbjct: 244 ttcgaaatgtttgacaccgttgactttttagcacatgtttgaccattcgtcttattcaaa 185
Query: 74 aaattt-atgaaatatgtaaaactatatatgtacataaaagtatatttgacaataaatca 132
|||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 184 aaattttatgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaataaatca 125
Query: 133 aataatatg--nnnnnnngataattacatagatttttggaataagacggatggtcaaaca 190
|| ||||| |||||||| || |||||| |||||||||| ||| ||||| |
Sbjct: 124 aacgatatgaaaaaaataaataattacttaaattttttgaataagacgaatgatcaaata 65
Query: 191 cgtcct-aaaagtcaacggtgtcaaatattttaaaacggagggagtac 237
||| || ||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 64 cgtactaaaaagtcaacggtgtcaaacattttgaaacggagggagtac 17
Score = 71.9 bits (36), Expect = 2e-13
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 162 atttttggaataagacggatggtcaaacacgtcctaaaa-gtcaacggtgtcaaatattt 220
|||||| |||||||||| ||||||||||| || |||||| ||||||||||||||| ||||
Sbjct: 181 attttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
Query: 221 taaaacggagggagta 236
||||||| ||||||
Sbjct: 241 cgaaacggatggagta 256
>49024_osa-miR806a:pmrd
Length = 252
Score = 89.7 bits (45), Expect = 9e-19
Identities = 132/160 (82%), Gaps = 5/160 (3%)
Strand = Plus / Minus
Query: 81 tgaaatatgtaaaactatatatgtacataaaagtatatttgacaataaatcaaataatat 140
||||||| |||||||||||| ||||||| ||||||||||| ||||| |||||||| |||
Sbjct: 167 tgaaatacgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatg-tat 109
Query: 141 gnnnnnnnga--taattacatagatttttggaataagacggatggtcaaacacgtcct-- 196
| | ||||||| || |||||| |||||||||| |||||||||||||| |
Sbjct: 108 gaaaagaataaataattacttaaattttttgaataagacgaatggtcaaacacgtattta 49
Query: 197 aaaagtcaacggtgtcaaatattttaaaacggagggagta 236
||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 48 aaaagtcaacggtgtcaaacattttgaaacggagagagta 9
Score = 71.9 bits (36), Expect = 2e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 197 aaaagtcaacggtgtcaaatattttaaaacggagggagta 236
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 207 aaaagtcaacggtgtcaaacattttaaaacggagggagta 246
>49030_osa-miR806g:pmrd
Length = 240
Score = 79.8 bits (40), Expect = 9e-16
Identities = 178/222 (80%), Gaps = 5/222 (2%)
Strand = Plus / Minus
Query: 18 aaatgttggacaccgtggacttcttataacaagtgtgaccctttatcttagtnaanaaat 77
||||||| |||||||| ||||| ||| ||| || ||||| || ||||| | || |||
Sbjct: 224 aaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaaag 165
Query: 78 tta-tgaaatatgtaaaactatatatgtacataaaagtatatttgacaataaatcaaata 136
||| ||||||||||||||||| || ||||||| ||||||||||| ||||| ||||||||
Sbjct: 164 ttagtgaaatatgtaaaactacatgtgtacatgaaagtatatttaacaatgaatcaaatg 105
Query: 137 atat--gnnnnnnngataattacat-agatttttggaataagacggatggtcaaacacgt 193
|||| |||||||| | | |||||||||||| ||| ||| ||||||||||
Sbjct: 104 atataaaaagaataaataattacttaatttttttggaataaaacgaatgatcaaacacgt 45
Query: 194 cct-aaaagtcaacggtgtcaaatattttaaaacggagggag 234
|| |||||||| |||||||||| ||||| ||||||||||||
Sbjct: 44 actaaaaagtcagcggtgtcaaacattttgaaacggagggag 3
Score = 77.8 bits (39), Expect = 4e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 163 tttttggaataagacggatggtcaaacacgtcctaaaa-gtcaacggtgtcaaatatttt 221
||||| |||||||||| | ||||||||| || |||||| ||||||||||||||| |||||
Sbjct: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
Query: 222 aaaacggagggagta 236
||||||||||||||
Sbjct: 226 gaaacggagggagta 240
>49027_osa-miR806d:pmrd
Length = 271
Score = 77.8 bits (39), Expect = 4e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 163 tttttggaataagacggatggtcaaacacgtcctaaaa-gtcaacggtgtcaaatatttt 221
||||| ||||||||| | ||||||||| || |||||| ||||||||||||||| |||||
Sbjct: 180 tttttagaataagactaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 239
Query: 222 aaaacggagggagta 236
|||||||||||||||
Sbjct: 240 aaaacggagggagta 254
Score = 65.9 bits (33), Expect = 1e-11
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 81 tgaaatatgtaaaactatatatgtacataaaagtatatttgacaataaatcaaataatat 140
|||||||||||||||||||| || | || ||||||||||| ||||| |||||||| ||||
Sbjct: 174 tgaaatatgtaaaactatatgtgcatatgaaagtatatttaacaatgaatcaaatgatat 115
Query: 141 g 141
|
Sbjct: 114 g 114
>49025_osa-miR806b:pmrd
Length = 215
Score = 77.8 bits (39), Expect = 4e-15
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 74 aaatttatgaaatatgtaaaactatatatgtacataaaagtatatttgacaataaatcaa 133
|||||| |||||||||||||| ||||| ||||||| ||||||||||| ||||| ||||||
Sbjct: 155 aaatttgtgaaatatgtaaaattatatgtgtacatgaaagtatatttaacaatgaatcaa 96
Query: 134 ataatat 140
|| ||||
Sbjct: 95 atgatat 89
>49031_osa-miR806h:pmrd
Length = 271
Score = 75.8 bits (38), Expect = 1e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 164 ttttggaataagacggatggtcaaacacgtcctaaaa-gtcaacggtgtcaaatatttta 222
|||| |||||||||| ||||||||||| || |||||| ||||||||||||||| ||||
Sbjct: 179 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttag 238
Query: 223 aaacggagggagta 236
||||||||||||||
Sbjct: 239 aaacggagggagta 252
Score = 54.0 bits (27), Expect = 5e-08
Identities = 76/91 (83%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 150 ataattacatagatttttggaataagacggatggtcaaacacgtcctaaaa-gtcaacgg 208
|||||||| || |||||| |||||||||| | ||||||||| | ||||| ||||||||
Sbjct: 101 ataattacttaaattttttgaataagacgaacggtcaaacatatgataaaaagtcaacgg 42
Query: 209 tgtcaaatattttaaaacggagggagtacta 239
|| ||| |||| |||||||||||||||||
Sbjct: 41 cgttaaacatttcgaaacggagggagtacta 11
>49028_osa-miR806e:pmrd
Length = 255
Score = 69.9 bits (35), Expect = 9e-13
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 170 aataagacggatggtcaaacacgtcctaaaa-gtcaacggtgtcaaatattttaaaacgg 228
||||||||| | ||||||||| || |||||| |||||||||||||||||||| ||||||
Sbjct: 180 aataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaatatttcgaaacgg 239
Query: 229 agggagt 235
|||||||
Sbjct: 240 agggagt 246
Score = 63.9 bits (32), Expect = 5e-11
Identities = 75/88 (85%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 150 ataattacatagatttttggaataagacggatggtcaaacacgtcctaaaa-gtcaacgg 208
|||||||| || |||||| |||||||||| | ||||||||| | |||||| ||||||||
Sbjct: 96 ataattacttaaattttttgaataagacgaacggtcaaacatatgctaaaaagtcaacgg 37
Query: 209 tgtcaaatattttaaaacggagggagta 236
|||||| ||||| ||||||| ||||||
Sbjct: 36 cgtcaaacattttgaaacggatggagta 9
>48799_oru-miR806:pmrd
Length = 242
Score = 69.9 bits (35), Expect = 9e-13
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 81 tgaaatatgtaaaactatatatgtacataaaagtatatttgacaataaatcaaat 135
|||||||| ||||||||||| | || |||||||||||||| ||||||||||||||
Sbjct: 161 tgaaatatataaaactatatgtatatataaaagtatatttaacaataaatcaaat 107
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 197 aaaagtcaacggtgtcaaatatttt 221
|||||||||||| ||||||||||||
Sbjct: 41 aaaagtcaacggcgtcaaatatttt 17
>49029_osa-miR806f:pmrd
Length = 241
Score = 67.9 bits (34), Expect = 3e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 164 ttttggaataagacggatggtcaaacacgtcctaaaa-gtcaacggtgtcaaatatttta 222
|||| |||||||||| | |||||||| || |||||| ||||||||||||||||||||
Sbjct: 167 tttttgaataagacgaacagtcaaacatgtgctaaaaagtcaacggtgtcaaatatttcg 226
Query: 223 aaacggagggagta 236
||||||||||||||
Sbjct: 227 aaacggagggagta 240
Score = 54.0 bits (27), Expect = 5e-08
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 77 tttatgaaatatgtaaaactatatatgtacataaaagtatatttgacaataaatcaaat 135
|||||||||||||||||| ||||| ||||| ||| ||||||| ||||| ||||||||
Sbjct: 164 tttatgaaatatgtaaaattatatgcctacatgaaaatatatttaacaatgaatcaaat 106
Score = 48.1 bits (24), Expect = 3e-06
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 162 atttttggaataagacggatggtcaaacacgtcctaaaa-gtcaacggtgtcaaatattt 220
|||||| |||||||||| | ||||||||| || ||||| |||||||| |||||| |||
Sbjct: 77 attttttgaataagacgaacggtcaaacatgtaataaaaagtcaacggcgtcaaacattc 18
Query: 221 taaaacggagggagta 236
||||||||||||||
Sbjct: 17 cgaaacggagggagta 2
>48794_oni-miR812:pmrd
Length = 172
Score = 50.1 bits (25), Expect = 8e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 150 ataattacatagatttttggaataagacggatggtcaaaca 190
||||||||||| | |||| |||||||||| |||||||||||
Sbjct: 118 ataattacataaagtttttgaataagacgaatggtcaaaca 158
>49190_osa-miR1884b:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 196 taaaagtcaacggtgtcaaatattt 220
|||||||||||||||||| ||||||
Sbjct: 188 taaaagtcaacggtgtcatatattt 212
