miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50220_osa-miRf11005-akr:pmrd
Length = 139
Score = 65.9 bits (33), Expect = 8e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 33 tacctcacggtaccaaatcgtttctaaccgttgaatctaacaatg 77
|||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 21 tacctcacggtaccaaatcgtttccaagcattgaatctaacaatg 65
>50089_osa-miRf10874-akr:pmrd
Length = 123
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 33 tacctcacggtaccaaatcgtttctaaccgttgaatctaacaatgtccatc 83
||||||||||||||||||| ||||||| | |||||| ||||||| ||||||
Sbjct: 13 tacctcacggtaccaaatcatttctaatcattgaatataacaatatccatc 63
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 78 tccatcgatgggaaacgatttagtactgtaaggtaccggtacctc 122
|||| |||| ||||||||||| |||| | |||||||||||||||
Sbjct: 77 tccaacgatcggaaacgatttggtaccatgaggtaccggtacctc 121
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 89 gaaacgatttagtactgtaaggtaccggtacctcaa 124
|||| ||||| |||| || |||||||||||||||||
Sbjct: 36 gaaatgatttggtaccgtgaggtaccggtacctcaa 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 33 tacctcacggtaccaaatcgtttc 56
||||||| ||||||||||||||||
Sbjct: 111 tacctcatggtaccaaatcgtttc 88
>50088_osa-miRf10873-akr:pmrd
Length = 125
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 33 tacctcacggtaccaaatcgtttctaaccgttgaatctaacaatgtccatc 83
||||||||||||||||||| ||||||| | |||||| ||||||| ||||||
Sbjct: 14 tacctcacggtaccaaatcatttctaatcattgaatataacaatatccatc 64
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 78 tccatcgatgggaaacgatttagtactgtaaggtaccggtacctc 122
|||| |||| ||||||||||| |||| | |||||||||||||||
Sbjct: 78 tccaacgatcggaaacgatttggtaccatgaggtaccggtacctc 122
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 89 gaaacgatttagtactgtaaggtaccggtacctcaa 124
|||| ||||| |||| || |||||||||||||||||
Sbjct: 37 gaaatgatttggtaccgtgaggtaccggtacctcaa 2
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 33 tacctcacggtaccaaatcgtttc 56
||||||| ||||||||||||||||
Sbjct: 112 tacctcatggtaccaaatcgtttc 89
>50087_osa-miRf10872-akr:pmrd
Length = 125
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 33 tacctcacggtaccaaatcgtttctaaccgttgaatctaacaatgtccatc 83
||||||||||||||||||| ||||||| | |||||| ||||||| ||||||
Sbjct: 14 tacctcacggtaccaaatcatttctaatcattgaatataacaatatccatc 64
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 78 tccatcgatgggaaacgatttagtactgtaaggtaccggtacctc 122
|||| |||| ||||||||||| |||| | |||||||||||||||
Sbjct: 78 tccaacgatcggaaacgatttggtaccatgaggtaccggtacctc 122
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 89 gaaacgatttagtactgtaaggtaccggtacctcaa 124
|||| ||||| |||| || |||||||||||||||||
Sbjct: 37 gaaatgatttggtaccgtgaggtaccggtacctcaa 2
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 33 tacctcacggtaccaaatcgtttc 56
||||||| ||||||||||||||||
Sbjct: 112 tacctcatggtaccaaatcgtttc 89
>50086_osa-miRf10871-akr:pmrd
Length = 142
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 33 tacctcacggtaccaaatcgtttctaaccgttgaatctaacaatgtccatc 83
||||||||||||||||||| ||||||| | |||||| ||||||| ||||||
Sbjct: 22 tacctcacggtaccaaatcatttctaatcattgaatataacaatatccatc 72
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 78 tccatcgatgggaaacgatttagtactgtaaggtaccggtacctc 122
|||| |||| ||||||||||| |||| | |||||||||||||||
Sbjct: 86 tccaacgatcggaaacgatttggtaccatgaggtaccggtacctc 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 89 gaaacgatttagtactgtaaggtaccggtacctcaa 124
|||| ||||| |||| || |||||||||||||||||
Sbjct: 45 gaaatgatttggtaccgtgaggtaccggtacctcaa 10
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 33 tacctcacggtaccaaatcgtttc 56
||||||| ||||||||||||||||
Sbjct: 120 tacctcatggtaccaaatcgtttc 97
>51207_osa-miRf11992-akr:pmrd
Length = 99
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 38 cacggtaccaaatcgtttctaaccgttgaatctaa 72
|||||||||||||||||||||| ||||| ||||||
Sbjct: 94 cacggtaccaaatcgtttctaatcgttggatctaa 60
>50224_osa-miRf11009-akr:pmrd
Length = 119
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 88 ggaaacgatttagtactgtaaggtaccggtacctc 122
|||||||||||||||| || |||||||||||||||
Sbjct: 35 ggaaacgatttagtaccgttaggtaccggtacctc 1
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 33 tacctcacggtaccaaatcgtttctaaccgttgaatcta 71
||||||||||||||||||| ||||| | ||||| |||||
Sbjct: 109 tacctcacggtaccaaatcatttctgatcgttggatcta 71
>51208_osa-miRf11993-akr:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 acggtaccaaatcgtttctaaccgttgaatctaa 72
||||||||||||||||||||| ||||| ||||||
Sbjct: 1 acggtaccaaatcgtttctaatcgttggatctaa 34
>51206_osa-miRf11991-akr:pmrd
Length = 123
Score = 52.0 bits (26), Expect = 1e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 33 tacctcacggtaccaaatcgtttctaaccgttgaatctaacaatgtccat 82
|||||||||||||||| |||||||| | ||||| |||||| |||| ||||
Sbjct: 13 tacctcacggtaccaagtcgtttctgatcgttggatctaaaaatgcccat 62
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 95 atttagtactgtaaggtaccggtacctc 122
||||||||| || |||||||||||||||
Sbjct: 94 atttagtaccgtgaggtaccggtacctc 121
>51020_osa-miRf11805-akr:pmrd
Length = 125
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 24 aggtattgatacctcacggtaccaaatcgtttct 57
|||||| | |||||||||||||||||||||||||
Sbjct: 121 aggtatcggtacctcacggtaccaaatcgtttct 88
>50917_osa-miRf11702-akr:pmrd
Length = 122
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 82 tcgatgggaaacgatttagtactgtaaggtaccggtacctc 122
||||| |||||| ||||||||| || |||||||||||||||
Sbjct: 48 tcgatcggaaacaatttagtaccgtgaggtaccggtacctc 8
>50916_osa-miRf11701-akr:pmrd
Length = 132
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 82 tcgatgggaaacgatttagtactgtaaggtaccggtacctc 122
||||| |||||| ||||||||| || |||||||||||||||
Sbjct: 53 tcgatcggaaacaatttagtaccgtgaggtaccggtacctc 13
>50343_osa-miRf11128-akr:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 15 agtatcttaaggtattgatacctcacggtaccaaatcgttt 55
||||||| |||||| | |||||||||||||||||||||||
Sbjct: 2 agtatctcgaggtatcggtacctcacggtaccaaatcgttt 42
>50344_osa-miRf11129-akr:pmrd
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 24 aggtattgatacctcacggtaccaaatcgttt 55
|||||| | |||||||||||||||||||||||
Sbjct: 88 aggtatcggtacctcacggtaccaaatcgttt 57
>50530_osa-miRf11315-akr:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 89 gaaacgatttagtactgtaaggtaccggtacctc 122
|||||||||| ||||||| ||||||||||||||
Sbjct: 59 gaaacgatttggtactgtggggtaccggtacctc 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 33 tacctcacggtaccaaatcgtttctaaccgttgaatctaa 72
|||| ||| |||||||||||||||| | |||| |||||||
Sbjct: 82 taccccacagtaccaaatcgtttctgatcgttcaatctaa 43
>51187_osa-miRf11972-akr:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 78 tccatcgatgggaaacgatttagtactgtaaggtaccggta 118
|||| |||| |||||||||||||||| | |||||||||||
Sbjct: 45 tccaacgatcggaaacgatttagtaccctcaggtaccggta 5
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 33 tacctcacggtaccaaatcgtttc 56
|||||||||||||||||| |||||
Sbjct: 109 tacctcacggtaccaaattgtttc 86
>51041_osa-miRf11826-akr:pmrd
Length = 112
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 78 tccatcgatgggaaacgatttagtactgtaaggtaccggtacctc 122
|||| |||| ||||||||||| |||| || || ||||||||||||
Sbjct: 58 tccaacgatcggaaacgatttggtaccgtgagataccggtacctc 14
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 36 ctcacggtaccaaatcgtttc 56
|||||||||||||||||||||
Sbjct: 27 ctcacggtaccaaatcgtttc 47
>51040_osa-miRf11825-akr:pmrd
Length = 112
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 78 tccatcgatgggaaacgatttagtactgtaaggtaccggtacctc 122
|||| |||| ||||||||||| |||| || || ||||||||||||
Sbjct: 55 tccaacgatcggaaacgatttggtaccgtgagataccggtacctc 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 36 ctcacggtaccaaatcgtttc 56
|||||||||||||||||||||
Sbjct: 86 ctcacggtaccaaatcgtttc 66
>49899_osa-miRf10684-akr:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 gatacctcacggtaccaaatc 51
|||||||||||||||||||||
Sbjct: 9 gatacctcacggtaccaaatc 29
>50297_osa-miRf11082-akr:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 36 ctcacggtaccaaatcgttt 55
||||||||||||||||||||
Sbjct: 14 ctcacggtaccaaatcgttt 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 33 tacctcacggtaccaaatcgtttc 56
||||||| ||||||||||||||||
Sbjct: 109 tacctcatggtaccaaatcgtttc 86
