miRNEST 2.0, an integrative microRNA resource :: BLAST
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 84
Query: 61 atgaatcgatcgataaacctctgcatcca 89
|||||||||||||||||||||||||||||
Sbjct: 85 atgaatcgatcgataaacctctgcatcca 113
>41090_tcc-MIR162:mirbase
Length = 131
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 22 tggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaatac 81
Query: 61 atgaatcgatcgataaacctctgcatcca 89
|||| ||||||||||||||||||||||||
Sbjct: 82 atgattcgatcgataaacctctgcatcca 110
>41220_csi-MIR162:mirbase
Length = 201
Score = 101 bits (51), Expect = 8e-23
Identities = 83/91 (91%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa-taacacaaa-t 58
|||||||||||||||||||||| ||| || ||||||||||||| || ||||||||| |
Sbjct: 90 tggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaat 149
Query: 59 acatgaatcgatcgataaacctctgcatcca 89
|||||||||||||||||||||||||||||||
Sbjct: 150 acatgaatcgatcgataaacctctgcatcca 180
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 89.7 bits (45), Expect = 3e-19
Identities = 81/89 (91%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 60
|||||||||||||||||||||||||||||| ||| |||| ||||| || | |||| | ||
Sbjct: 14 tggaggcagcggttcatcgatctcttcctgggaa-tttggtgtga-aaaatcacaga-ac 70
Query: 61 atgaatcgatcgataaacctctgcatcca 89
|||||||||||||||||||||||||||||
Sbjct: 71 atgaatcgatcgataaacctctgcatcca 99
>40342_rco-MIR162:mirbase
Length = 101
Score = 77.8 bits (39), Expect = 1e-15
Identities = 80/91 (87%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcct-gagaattttgttgtgaga-ataacacaaat 58
||||||||||||||||||||||||||||| || |||||||||||| | | || |||
Sbjct: 5 tggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaataaaac 64
Query: 59 acatgaatcgatcgataaacctctgcatcca 89
||||||||||||||||||||||||||||||
Sbjct: 65 gcatgaatcgatcgataaacctctgcatcca 95
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatctcttcctg 41
>40437_gma-MIR162:mirbase
Length = 102
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 60 catgaatcgatcgataaacctctgcatcca 89
||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatcca 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctga 31
|||| ||||||||||||||||||||||||||
Sbjct: 11 tggatgcagcggttcatcgatctcttcctga 41
>40024_ath-MIR162a:mirbase
Length = 140
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 26 tggaggcagcggttcatcgatctcttcctg 55
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 catgaatcgatcgataaacctctgcatcca 89
||||||| ||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatcca 108
>39813_aly-MIR162b:mirbase
Length = 184
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 60 catgaatcgatcgataaacctctgcatcca 89
||||||||||||||||||||||||||||||
Sbjct: 103 catgaatcgatcgataaacctctgcatcca 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgagaat 35
|||||||||||||||||||||| |||||| ||||
Sbjct: 51 tggaggcagcggttcatcgatcaattcctgtgaat 85
>39812_aly-MIR162a:mirbase
Length = 228
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 69 tggaggcagcggttcatcgatctcttcctg 98
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 catgaatcgatcgataaacctctgcatcca 89
||||||| ||||||||||||||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatcca 155
>42502_sbi-MIR162:mirbase
Length = 127
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 63 gaatcgatcgataaacctctgcatcca 89
|||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatcca 126
>41929_osa-MIR162a:mirbase
Length = 171
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 63 gaatcgatcgataaacctctgcatcca 89
|||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatcca 162
>41578_vvi-MIR162:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctga 31
|||| ||||||||||||||||||||||||||
Sbjct: 10 tggatgcagcggttcatcgatctcttcctga 40
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctga 31
||||||||||||||||||||||| |||||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcctga 42
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctga 31
||||||||||||||||||||||| |||||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcctga 42
>40663_mtr-MIR162:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 acatgaatcgatcgataaacctctgcatcca 89
|||||||||| ||||||||||||||||||||
Sbjct: 76 acatgaatcggtcgataaacctctgcatcca 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctga 31
|||| |||||||||||||||||| |||||||
Sbjct: 22 tggatgcagcggttcatcgatctgttcctga 52
>40025_ath-MIR162b:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 63 gaatcgatcgataaacctctgcatcca 89
|||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatcca 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgagaat 35
|||||||||||||||||||||| |||||| ||||
Sbjct: 13 tggaggcagcggttcatcgatcaattcctgtgaat 47
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 gaatcgatcgataaacctctgcatcc 88
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 63 gaatcgatcgataaacctctgcatcca 89
|||||| ||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatcca 129
>41930_osa-MIR162b:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 63 gaatcgatcgataaacctctgcatcca 89
|||||||||||||| ||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatcca 123
>41530_sly-MIR162:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 63 gaatcgatcgataaacctctgcatcca 89
|||||| ||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatcca 98
