miRNEST 2.0, an integrative microRNA resource :: BLAST
>49031_osa-miR806h:pmrd
Length = 271
Score = 278 bits (140), Expect = 1e-75
Identities = 177/188 (94%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 1 cgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaat 60
|||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 40 cgccgttgactttttat-catatgtttgaccgttcgtcttattcaaaaaatttaagtaat 98
Query: 61 tattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggcatataa 120
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 99 tattaattcttttcctatcatttgattcattgttaaatatatttttatgtaggcatataa 158
Query: 121 ttttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagt 180
|||||||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||||||
Sbjct: 159 ttttacatatctcacaaaagtttttgaataagacgaatggtcaaacatgtgctaaaaagt 218
Query: 181 caacggtg 188
||||||||
Sbjct: 219 caacggtg 226
Score = 61.9 bits (31), Expect = 2e-10
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 3 ccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 49
|||||||| ||||| |||||||||||||| |||||||||||||||||
Sbjct: 224 ccgttgacttttta-gcacatgtttgaccattcgtcttattcaaaaa 179
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 141 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacgg 186
||||||||||||| ||||||| ||| || || ||||||||||||||
Sbjct: 87 tttttgaataagacgaacggtcaaacatatgataaaaagtcaacgg 42
>49028_osa-miR806e:pmrd
Length = 255
Score = 270 bits (136), Expect = 4e-73
Identities = 176/188 (93%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 1 cgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaat 60
|||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 35 cgccgttgacttttta-gcatatgtttgaccgttcgtcttattcaaaaaatttaagtaat 93
Query: 61 tattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggcatataa 120
|||||||||||||| |||||||| ||| ||||||||||||||||| ||| ||||||||||
Sbjct: 94 tattaattcttttcttatcatttaatttattgttaaatatatttttatgtaggcatataa 153
Query: 121 ttttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagt 180
||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||
Sbjct: 154 ttttacatatttcacaaaagtttttaaataagacgaacggtcaaacatgtgctaaaaagt 213
Query: 181 caacggtg 188
||||||||
Sbjct: 214 caacggtg 221
Score = 61.9 bits (31), Expect = 2e-10
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 3 ccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 49
|||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 219 ccgttgacttttta-gcacatgtttgaccgttcgtcttatttaaaaa 174
Score = 60.0 bits (30), Expect = 6e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 141 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacgg 186
||||||||||||| ||||||| ||| || |||||||||||||||||
Sbjct: 82 tttttgaataagacgaacggtcaaacatatgctaaaaagtcaacgg 37
>49029_osa-miR806f:pmrd
Length = 241
Score = 240 bits (121), Expect = 3e-64
Identities = 157/169 (92%)
Strand = Plus / Plus
Query: 20 acatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatc 79
|||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||
Sbjct: 46 acatgtttgaccgttcgtcttattcaaaaaattttgacacttaataattcttttcctatc 105
Query: 80 atttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaa 139
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 106 atttgattcattgttaaatatattttcatgtaggcatataattttacatatttcataaaa 165
Query: 140 gtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtg 188
|||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct: 166 gtttttgaataagacgaacagtcaaacatgtgctaaaaagtcaacggtg 214
Score = 61.9 bits (31), Expect = 2e-10
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 3 ccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaa 49
|||||||| ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 212 ccgttgacttttta-gcacatgtttgactgttcgtcttattcaaaaa 167
Score = 56.0 bits (28), Expect = 1e-08
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 135 caaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtcaacgg 186
||||| ||||||||||||| ||||||| ||| |||| ||||||||||||||
Sbjct: 81 caaaattttttgaataagacgaacggtcaaacatgtaataaaaagtcaacgg 30
>49025_osa-miR806b:pmrd
Length = 215
Score = 196 bits (99), Expect = 4e-51
Identities = 166/187 (88%), Gaps = 1/187 (0%)
Strand = Plus / Plus
Query: 3 ccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaa-aatttaagtaatt 61
|||||||| ||||||| || |||||||| |||||||||||||||| |||||||||||||
Sbjct: 16 ccgttgactttttaagtacgtgtttgactattcgtcttattcaaaaaaatttaagtaatt 75
Query: 62 attaattcttttcctatcatttgattcattgttaaatatattttcatgcaggcatataat 121
||| |||||||| |||||||||||||||||||||||||| ||||||| | ||||||||
Sbjct: 76 atttattctttttatatcatttgattcattgttaaatatactttcatgtacacatataat 135
Query: 122 tttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 181
||||||||||||||||| ||||| ||||||| |||| || || |||||||||||||||
Sbjct: 136 tttacatatttcacaaattttttttaataagacgaacagtcaagaatgtgctaaaaagtc 195
Query: 182 aacggtg 188
|||||||
Sbjct: 196 aacggtg 202
Score = 40.1 bits (20), Expect = 6e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 3 ccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 50
|||||||| ||||| |||||| ||||| |||||||||||| ||||||
Sbjct: 200 ccgttgacttttta-gcacattcttgactgttcgtcttattaaaaaaa 154
>49024_osa-miR806a:pmrd
Length = 252
Score = 186 bits (94), Expect = 4e-48
Identities = 165/186 (88%), Gaps = 2/186 (1%)
Strand = Plus / Plus
Query: 3 ccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaatta 62
|||||||| |||||| || ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 37 ccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaatta 96
Query: 63 ttaattcttttcctatcatttgattcattgttaaatatattttcatgcaggcatataatt 122
|| ||||||||| || ||||||||||||||||||||||| ||||||| | |||||| ||
Sbjct: 97 tttattcttttcata-catttgattcattgttaaatatactttcatgtacacatatagtt 155
Query: 123 ttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagtca 182
|||| ||||||| |||| ||| ||||||| ||||||||||| ||||||||||||||||
Sbjct: 156 ttacgtatttcaaaaaaaaattt-aataagacgaacggttaaacatgtgctaaaaagtca 214
Query: 183 acggtg 188
||||||
Sbjct: 215 acggtg 220
Score = 50.1 bits (25), Expect = 6e-07
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 3 ccgttgacattttaagcacatgtttgaccgttcgtcttatt 43
|||||||| ||||| |||||||||| |||||||||||||||
Sbjct: 218 ccgttgacttttta-gcacatgtttaaccgttcgtcttatt 179
>49026_osa-miR806c:pmrd
Length = 270
Score = 182 bits (92), Expect = 6e-47
Identities = 140/156 (89%)
Strand = Plus / Plus
Query: 33 ttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattg 92
|||||||||||||||||||||||||||||||| ||| ||||| |||| ||||||| ||||
Sbjct: 75 ttcgtcttattcaaaaaatttaagtaattatttatttttttcatatcgtttgatttattg 134
Query: 93 ttaaatatattttcatgcaggcatataattttacatatttcacaaaagtttttgaataag 152
||||||||| ||||||| | |||||| |||||||||||||| |||| ||||||||||||
Sbjct: 135 ttaaatatactttcatgtacacatatagttttacatatttcataaaattttttgaataag 194
Query: 153 atgaacggttaaatatgtgctaaaaagtcaacggtg 188
| ||| ||| ||| ||||||||||||||||||||||
Sbjct: 195 acgaatggtcaaacatgtgctaaaaagtcaacggtg 230
Score = 69.9 bits (35), Expect = 7e-13
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 3 ccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaattt 53
|||||||| ||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 228 ccgttgacttttta-gcacatgtttgaccattcgtcttattcaaaaaattt 179
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 141 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtg 188
||||||||||||| ||| | | ||||| || |||||||||||||||||
Sbjct: 91 tttttgaataagacgaatgatcaaatacgtactaaaaagtcaacggtg 44
>49027_osa-miR806d:pmrd
Length = 271
Score = 170 bits (86), Expect = 2e-43
Identities = 146/166 (87%)
Strand = Plus / Plus
Query: 23 tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 82
||||||||| ||||| ||||||||||||||||| |||||||| ||||||||| |||||||
Sbjct: 63 tgtttgaccattcgttttattcaaaaaatttaaataattatttattcttttcatatcatt 122
Query: 83 tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 142
||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||
Sbjct: 123 tgattcattgttaaatatactttcatatgcacatatagttttacatatttcacaattttt 182
Query: 143 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtg 188
|| |||||||| |||||| ||| ||||||||||||||||||||||
Sbjct: 183 ttagaataagactaacggtcaaacatgtgctaaaaagtcaacggtg 228
Score = 56.0 bits (28), Expect = 1e-08
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 3 ccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 50
|||||||| ||||| ||||||||||||||||| ||||||||| |||||
Sbjct: 226 ccgttgacttttta-gcacatgtttgaccgttagtcttattctaaaaa 180
>49030_osa-miR806g:pmrd
Length = 240
Score = 165 bits (83), Expect = 1e-41
Identities = 147/167 (88%), Gaps = 1/167 (0%)
Strand = Plus / Plus
Query: 23 tgtttgaccgttcgtcttattc-aaaaaatttaagtaattattaattcttttcctatcat 81
||||||| | ||||| |||||| |||||| ||||||||||||| |||||||| ||||||
Sbjct: 48 tgtttgatcattcgttttattccaaaaaaattaagtaattatttattctttttatatcat 107
Query: 82 ttgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagt 141
|||||||||||||||||||| ||||||| | ||| || ||||||||||||||| || |
Sbjct: 108 ttgattcattgttaaatatactttcatgtacacatgtagttttacatatttcactaactt 167
Query: 142 ttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtg 188
|||||||||||| ||||||| ||| ||||||||||||||||||||||
Sbjct: 168 ttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtg 214
Score = 71.9 bits (36), Expect = 2e-13
Identities = 46/48 (95%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 3 ccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaa 50
|||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 212 ccgttgacttttta-gcacatgtttgaccgttcgtcttattcaaaaaa 166
>48799_oru-miR806:pmrd
Length = 242
Score = 157 bits (79), Expect = 4e-39
Identities = 131/147 (89%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 25 tttgaccgttcgtcttattcaaaa-aatttaagtaattattaattcttttcctatcattt 83
|||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||
Sbjct: 51 tttgaccgttcgtcttattcaaaaaaatttaagtaattaataattcctttcctatcattt 110
Query: 84 gattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagttt 143
|||| ||||||||||||| ||| || | |||||| ||||| ||||||||||||| |||
Sbjct: 111 gatttattgttaaatatacttttatatatacatatagttttatatatttcacaaaaattt 170
Query: 144 ttgaataagatgaacggttaaatatgt 170
|||||||||| ||||||| ||| ||||
Sbjct: 171 ttgaataagacgaacggtcaaacatgt 197
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 20 acatgtttgaccgttcgtcttattcaaaaa 49
||||||||||||||||||||||||||||||
Sbjct: 197 acatgtttgaccgttcgtcttattcaaaaa 168
Score = 44.1 bits (22), Expect = 4e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 141 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacgg 186
||||||||||||| ||||||| |||||| | |||||||||||||
Sbjct: 75 tttttgaataagacgaacggtcaaatatatttaaaaaagtcaacgg 30
>48794_oni-miR812:pmrd
Length = 172
Score = 65.9 bits (33), Expect = 1e-11
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 19 cacatgtttgaccgttcgtcttattcaaaaaatttaagtaattat 63
||||||||||||| ||||||||||||||||| |||| ||||||||
Sbjct: 162 cacatgtttgaccattcgtcttattcaaaaactttatgtaattat 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 19 cacatgtttgaccgttcgtcttattcaaaaaatttaagtaa 59
||||||||||||| ||||| ||||| ||||| |||| ||||
Sbjct: 11 cacatgtttgaccattcgttttatttaaaaattttatgtaa 51
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 137 aaagtttttgaataagatgaacggttaaatatgtgctaaaaagtc 181
||||||||||||||||| ||| ||| ||| ||||| ||||||||
Sbjct: 128 aaagtttttgaataagacgaatggtcaaacatgtgagaaaaagtc 172
>49189_osa-miR1884a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 gtttgaccgttcgtcttattcaaaaa 49
|||||||| |||||||||||||||||
Sbjct: 36 gtttgaccattcgtcttattcaaaaa 61
>49422_osa-miRf10207-akr:pmrd
Length = 165
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 23 tgtttgaccgttcgtcttattcaaaaaa 50
||||||||| |||||||||||||||||
Sbjct: 154 tgtttgaccactcgtcttattcaaaaaa 127
>49049_osa-miR812b:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 gtttgaccgttcgtcttatt 43
||||||||||||||||||||
Sbjct: 15 gtttgaccgttcgtcttatt 34
>48800_oru-miR812:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 22 atgtttgaccgttcgtcttattcaaaaaattt 53
|||||| ||||||||||||||| ||||||||
Sbjct: 161 atgtttaaccgttcgtcttatttgaaaaattt 130
