miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>49917_osa-miRf10702-akr:pmrd
          Length = 155

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 55  gacaaatagagggacctaaagtgaacttattc 86
           |||||||||||||||| |||||||||||||||
Sbjct: 155 gacaaatagagggacccaaagtgaacttattc 124




>50131_osa-miRf10916-akr:pmrd
          Length = 75

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 39/42 (92%), Gaps = 1/42 (2%)
 Strand = Plus / Plus

                                                    
Query: 44 tcggactgaccgacaaatagagggacctaaagtgaacttatt 85
          ||||||||  ||||||||||||||||| ||||||||||||||
Sbjct: 1  tcggactgggcgacaaatagagggacc-aaagtgaacttatt 41




>49545_osa-miRf10330-akr:pmrd
          Length = 91

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 63 gagggacctaaagtgaacttattc 86
          ||||||||||||||||||||||||
Sbjct: 3  gagggacctaaagtgaacttattc 26