miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 49  gccttcgtggatggcatgctcggagccatgca 80
           |||||||||||||||||||  |||||||||||
Sbjct: 69  gccttcgtggatggcatgcgaggagccatgca 100



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgcctggctccttgtatgccatt 23
          ||||||||||| |||||||||||
Sbjct: 21 tgcctggctccctgtatgccatt 43




>39461_ppt-MIR160g:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tgcctggctccttgtatgccat 22
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccttgtatgccat 51




>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 1  tgcctggctccttgtatgccattcgtggagtc 32
          ||||||||||| ||||||||||| || |||||
Sbjct: 6  tgcctggctccctgtatgccatttgtagagtc 37




>39462_ppt-MIR160h:mirbase
          Length = 136

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 2  gcctggctccttgtatgcca 21
          ||||||||||||||||||||
Sbjct: 30 gcctggctccttgtatgcca 49




>41577_vvi-MIR160e:mirbase
          Length = 102

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgcctggctccttgtatgccatt 23
          ||||||||||| |||||||||||
Sbjct: 11 tgcctggctccctgtatgccatt 33




>41576_vvi-MIR160d:mirbase
          Length = 102

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgcctggctccttgtatgccatt 23
          ||||||||||| |||||||||||
Sbjct: 11 tgcctggctccctgtatgccatt 33




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgcctggctccttgtatgccatt 23
          ||||||||||| |||||||||||
Sbjct: 20 tgcctggctccctgtatgccatt 42




>41307_ptc-MIR160c:mirbase
          Length = 98

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgcctggctccttgtatgccatt 23
          ||||||||||| |||||||||||
Sbjct: 11 tgcctggctccctgtatgccatt 33




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgcctggctccttgtatgccatt 23
          ||||||||||| |||||||||||
Sbjct: 11 tgcctggctccctgtatgccatt 33




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgcctggctccttgtatgccatt 23
          ||||||||||| |||||||||||
Sbjct: 33 tgcctggctccctgtatgccatt 55




>41166_aqc-MIR160b:mirbase
          Length = 82

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgcctggctccttgtatgccatt 23
          ||||||||||| |||||||||||
Sbjct: 1  tgcctggctccctgtatgccatt 23




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgcctggctccttgtatgccatt 23
          ||||||||||| |||||||||||
Sbjct: 21 tgcctggctccctgtatgccatt 43




>40436_gma-MIR160:mirbase
          Length = 119

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgcctggctccttgtatgccatt 23
          ||||||||||| |||||||||||
Sbjct: 21 tgcctggctccctgtatgccatt 43




>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgcctggctccttgtatgccatt 23
          ||||||||||| |||||||||||
Sbjct: 6  tgcctggctccctgtatgccatt 28