miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 180 bits (91), Expect = 2e-46
Identities = 157/177 (88%), Gaps = 9/177 (5%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 61 cccacagccctatctcataataaagactctagtcttcttggataggcttgtggcttgcat 120
||||||||||||| | | ||| | || | |||||||||||||||||||||||
Sbjct: 66 cccacagccctat----aagcagagattata---attttggataggcttgtggcttgcat 118
Query: 121 atctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagctc 177
||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct: 119 atctcaggagcttcattac--cttgtattagatccttgtttggattgaagggagctc 173
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 121 bits (61), Expect = 2e-28
Identities = 151/178 (84%), Gaps = 11/178 (6%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacagccctatctcat-aataaagactctagtcttcttggataggcttgtggcttgca 119
|||||||||||||| | | ||| | | | ||||||||||||||||||||||
Sbjct: 71 cccacagccctatcccgtcaatgggg------ggc--attggataggcttgtggcttgca 122
Query: 120 tatctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagctc 177
||||||||||||| ||||| || | ||||||||||||||||||||||||||||||
Sbjct: 123 tatctcaggagctgcatta--tccaagtttagatccttgtttggattgaagggagctc 178
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 107 bits (54), Expect = 3e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||| | || |||||||||||| |||||||||||||||| ||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacagccctatc 74
||||||||||||||
Sbjct: 73 cccacagccctatc 86
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 101 bits (51), Expect = 2e-22
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cccacagccctatct 75
|||||| |||||||
Sbjct: 73 -ccacagtcctatct 86
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 101 bits (51), Expect = 2e-22
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cccacagccctatct 75
|||||| |||||||
Sbjct: 73 -ccacagtcctatct 86
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 101 bits (51), Expect = 2e-22
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 152 atccttgtttggattgaagggagctc 177
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 101 bits (51), Expect = 2e-22
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 152 atccttgtttggattgaagggagctc 177
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>40397_ahy-MIR159:mirbase
Length = 197
Score = 101 bits (51), Expect = 2e-22
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggat 64
Query: 61 cccacag 67
|||||||
Sbjct: 65 cccacag 71
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 150 agatccttgtttggattgaagggagctc 177
|||||||| |||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctc 175
>40432_gma-MIR159a:mirbase
Length = 214
Score = 93.7 bits (47), Expect = 4e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacag 67
|||||||
Sbjct: 83 cccacag 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 154 ccttgtttggattgaagggagctc 177
|||| |||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctc 193
>41218_csi-MIR159:mirbase
Length = 216
Score = 83.8 bits (42), Expect = 4e-17
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgct-gggtagattgagctgctgagctatgga 59
|||||||||||||||||| ||||| ||| || ||||| |||||||||||||||||||||
Sbjct: 14 gagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgga 73
Query: 60 tcccacagccctat 73
|||||||| |||||
Sbjct: 74 tcccacagtcctat 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 101 gataggcttgtggcttgcatatctcaggagcttcattacctctta 145
|||||||||||||||||||||| || ||| |||||||||| ||||
Sbjct: 125 gataggcttgtggcttgcatatttctggaccttcattacccctta 169
>41528_sly-MIR159:mirbase
Length = 177
Score = 54.0 bits (27), Expect = 4e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||| | | |||| | || || ||||||||||||| ||||||||
Sbjct: 3 gagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatggat 62
Query: 61 cccacagccctatct 75
|| |||||||||||
Sbjct: 63 tcctcagccctatct 77
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 146 tgttagatccttgtttggattgaagggagctc 177
|||| |||| || |||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctc 175
>40435_gma-MIR159d:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 39 attgagctgctgagctatggatcccacag 67
||||||||||| |||||||||||||||||
Sbjct: 7 attgagctgcttagctatggatcccacag 35
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 tggcttgcatatctcaggagctt 133
|||||||||||||||||||||||
Sbjct: 130 tggcttgcatatctcaggagctt 152
>42700_zma-MIR159k:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tgtttggattgaagggagctc 177
|||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctc 197
>42699_zma-MIR159j:mirbase
Length = 252
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tgtttggattgaagggagctc 177
|||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctc 249
>42691_zma-MIR159b:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tgtttggattgaagggagctc 177
|||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctc 200
>42634_tae-MIR159a:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tgtttggattgaagggagctc 177
|||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctc 172
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tgtttggattgaagggagctc 177
|||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctc 29
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tgtttggattgaagggagctc 177
|||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctc 174
>40018_ath-MIR159c:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 gtttggattgaagggagctc 177
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
>39806_aly-MIR159c:mirbase
Length = 220
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 gtttggattgaagggagctc 177
||||||||||||||||||||
Sbjct: 196 gtttggattgaagggagctc 215
