miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 121 bits (61), Expect = 2e-28
Identities = 151/178 (84%), Gaps = 11/178 (6%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacagccctatctcat-aataaagactctagtcttcttggataggcttgtggcttgca 119
|||||||||||||| | | ||| | | | ||||||||||||||||||||||
Sbjct: 71 cccacagccctatcccgtcaatgggg------ggc--attggataggcttgtggcttgca 122
Query: 120 tatctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagctc 177
||||||||||||| ||||| || | ||||||||||||||||||||||||||||||
Sbjct: 123 tatctcaggagctgcatta--tccaagtttagatccttgtttggattgaagggagctc 178
>51603_ptc-miR159b:pmrd
Length = 187
Score = 107 bits (54), Expect = 3e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||| | || |||||||||||| |||||||||||||||| ||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacagccctatc 74
||||||||||||||
Sbjct: 73 cccacagccctatc 86
>54378_pvu-miR159:pmrd
Length = 174
Score = 101 bits (51), Expect = 2e-22
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 152 atccttgtttggattgaagggagctc 177
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>54377_pvu-miR159:pmrd
Length = 174
Score = 101 bits (51), Expect = 2e-22
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 152 atccttgtttggattgaagggagctc 177
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 101 bits (51), Expect = 2e-22
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||
Sbjct: 8 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 67
Query: 61 cccacagccctatct 75
|||||| |||||||
Sbjct: 68 -ccacagtcctatct 81
>51604_ptc-miR159c:pmrd
Length = 183
Score = 101 bits (51), Expect = 2e-22
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cccacagccctatct 75
|||||| |||||||
Sbjct: 73 -ccacagtcctatct 86
>51602_ptc-miR159a:pmrd
Length = 183
Score = 101 bits (51), Expect = 2e-22
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cccacagccctatct 75
|||||| |||||||
Sbjct: 73 -ccacagtcctatct 86
>48539_gma-miR159a:pmrd
Length = 214
Score = 93.7 bits (47), Expect = 4e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacag 67
|||||||
Sbjct: 83 cccacag 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 154 ccttgtttggattgaagggagctc 177
|||| |||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctc 193
>54540_sly-miR159:pmrd
Length = 177
Score = 54.0 bits (27), Expect = 4e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatggat 60
|||||||||||||||||| | | |||| | || || ||||||||||||| ||||||||
Sbjct: 3 gagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatggat 62
Query: 61 cccacagccctatct 75
|| |||||||||||
Sbjct: 63 tcctcagccctatct 77
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 146 tgttagatccttgtttggattgaagggagctc 177
|||| |||| || |||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctc 175
>54931_zma-miR159b:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tgtttggattgaagggagctc 177
|||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctc 200
>54673_tae-miR159a:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tgtttggattgaagggagctc 177
|||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctc 172
>48657_hvv-miR159b:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tgtttggattgaagggagctc 177
|||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctc 172
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 101 gataggcttgtggcttgcat 120
||||||||||||||||||||
Sbjct: 150 gataggcttgtggcttgcat 169
>46933_ath-miR159c:pmrd
Length = 225
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 gtttggattgaagggagctc 177
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
