miRNEST 2.0, an integrative microRNA resource :: BLAST
>50597_osa-miRf11382-akr:pmrd
Length = 178
Score = 99.6 bits (50), Expect = 6e-22
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 65 gacaagtcacgcataaaatattaatcatgttttataatctaacaacaataaaaatacaaa 124
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||| ||||| ||| |||||||||||
Sbjct: 125 ttataaaaaaatttcatataaaacggacagtcaaagttggaca 167
>50030_osa-miRf10815-akr:pmrd
Length = 175
Score = 99.6 bits (50), Expect = 6e-22
Identities = 88/103 (85%)
Strand = Plus / Minus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 111 gacaagtcacgtataaaatattaatcatgttttatcatctaacaacaatgaaaatacaaa 52
Query: 112 ttatnnnnnnntttcatataagacggatagttaaagttggaca 154
|||| |||||||||||||||| ||| |||||||||||
Sbjct: 51 ttataaaaaaatttcatataagacggacagtcaaagttggaca 9
>49875_osa-miRf10660-akr:pmrd
Length = 191
Score = 97.6 bits (49), Expect = 2e-21
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 122 aagtcacgcataaagtattaatcatgttttatcatctaacaacaataaaaatactaatta 63
Query: 115 t 115
|
Sbjct: 62 t 62
>50503_osa-miRf11288-akr:pmrd
Length = 176
Score = 95.6 bits (48), Expect = 9e-21
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 113 gacaagtcacgcataaagtattaatcatgttttatcatctaacaacaatgaaaatactaa 54
Query: 112 ttat 115
||||
Sbjct: 53 ttat 50
>50829_osa-miRf11614-akr:pmrd
Length = 179
Score = 89.7 bits (45), Expect = 6e-19
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaata 107
|||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 110 aagtcatgcataaagtattaatcatgttttatcatctaacagcaataaaaata 58
>50253_osa-miRf11038-akr:pmrd
Length = 172
Score = 89.7 bits (45), Expect = 6e-19
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 107 aagtcatgcataaagtattaaccatgttttatcatctaacaacaatgaaaatactaatta 48
Query: 115 t 115
|
Sbjct: 47 t 47
>50252_osa-miRf11037-akr:pmrd
Length = 172
Score = 89.7 bits (45), Expect = 6e-19
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 107 aagtcatgcataaagtattaaccatgttttatcatctaacaacaatgaaaatactaatta 48
Query: 115 t 115
|
Sbjct: 47 t 47
>50251_osa-miRf11036-akr:pmrd
Length = 179
Score = 89.7 bits (45), Expect = 6e-19
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 111 aagtcatgcataaagtattaaccatgttttatcatctaacaacaatgaaaatactaatta 52
Query: 115 t 115
|
Sbjct: 51 t 51
>50468_osa-miRf11253-akr:pmrd
Length = 177
Score = 87.7 bits (44), Expect = 2e-18
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaata 107
||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 112 gacaaatcatgcataaagtattaatcatgttttatcatctaacaacaatgaaaata 57
>50423_osa-miRf11208-akr:pmrd
Length = 175
Score = 87.7 bits (44), Expect = 2e-18
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| |||||||||||||| |||||||||||||||||||| ||||||| ||
Sbjct: 112 gacaagtcacgcataaagtattaatcatattttatcatctaacaacaatgaaaatactaa 53
Query: 112 ttat 115
||||
Sbjct: 52 ttat 49
>50576_osa-miRf11361-akr:pmrd
Length = 179
Score = 85.7 bits (43), Expect = 9e-18
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| |||||||||||||| |||||||||||||||||||| ||||||| |||||
Sbjct: 111 aagtcacgcataaagtattaatcatattttatcatctaacaacaatgaaaatactaatta 52
Query: 115 tnnnnnnntttcatataagacgga 138
| ||||||||||||||||
Sbjct: 51 taaaaaattttcatataagacgga 28
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1 ccaatgtttgaccgtccgttttatttg 27
|||| ||||||||||||||||||||||
Sbjct: 166 ccaacgtttgaccgtccgttttatttg 140
>49729_osa-miRf10514-akr:pmrd
Length = 173
Score = 85.7 bits (43), Expect = 9e-18
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 108 aagtcacgcataaagtgttaatcatgttttatcatctaacaacaatgaaaatactaatta 49
Query: 115 tnnnnnnntttcatataagacgga 138
| ||||||||||||||||
Sbjct: 48 taaaaaaatttcatataagacgga 25
>51125_osa-miRf11910-akr:pmrd
Length = 174
Score = 81.8 bits (41), Expect = 1e-16
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 66 aaagtattaatca-tgttttatcatctaacaacaataaaaatacgaattatnnnnnnntt 124
||||||||||||| |||||||||||||||||||||||||||||| |||||| ||
Sbjct: 98 aaagtattaatcaatgttttatcatctaacaacaataaaaatactaattataaaaaaatt 39
Query: 125 tcatataagacgga 138
||||||||||||||
Sbjct: 38 tcatataagacgga 25
>50950_osa-miRf11735-akr:pmrd
Length = 185
Score = 79.8 bits (40), Expect = 5e-16
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||| ||
Sbjct: 118 gacaagtcacgcataaagtattaatcatgttt-atcatctaacaacaatgaaaatactaa 60
Query: 112 ttat 115
||||
Sbjct: 59 ttat 56
>50624_osa-miRf11409-akr:pmrd
Length = 167
Score = 79.8 bits (40), Expect = 5e-16
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 52 gacaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaa 111
||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||| ||
Sbjct: 114 gacaagtcacgcattaagtattaatcatgttttattatctaacaataataaaaatactaa 55
Query: 112 ttat 115
||||
Sbjct: 54 ttat 51
>50479_osa-miRf11264-akr:pmrd
Length = 175
Score = 77.8 bits (39), Expect = 2e-15
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
|||||| ||| |||||||||||||| ||||||||||||||||||| ||||||| |||||
Sbjct: 108 aagtcacgcataaagtattaatcattttttatcatctaacaacaacgaaaatactaatta 49
Query: 115 tnnnnnnntttcatataagacgga 138
| ||||||||||||||||
Sbjct: 48 taaaaaaatttcatataagacgga 25
>49549_osa-miRf10334-akr:pmrd
Length = 162
Score = 71.9 bits (36), Expect = 1e-13
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnnttt 125
|||||||||| |||||||||||||||||||||||| |||| || |||||| |||
Sbjct: 97 aaagtattaaacatgttttatcatctaacaacaatgaaaacactaattataaaaatattt 38
Query: 126 catataagacgga 138
|||||||||||||
Sbjct: 37 catataagacgga 25
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 7 tttgaccgtccgttttatttg 27
|||||||||||||||||||||
Sbjct: 145 tttgaccgtccgttttatttg 125
>49051_osa-miR812d:pmrd
Length = 153
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatac 108
|||||||| ||| ||||||||| |||||||||||||| ||| ||||||||||||||
Sbjct: 51 acaagtcacgcataaagtattattcatgttttatcatataagaacaataaaaatac 106
>49912_osa-miRf10697-akr:pmrd
Length = 183
Score = 69.9 bits (35), Expect = 5e-13
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 75 atcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcatataaga 134
|||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 88 atcatgttttatcatctaacaacaatgaaaatactaattataaaaaattttcatataaga 29
Query: 135 cgga 138
||||
Sbjct: 28 cgga 25
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcat 89
|||||| ||| ||||||||||||||||||||||||
Sbjct: 118 aagtcacgcataaagtattaatcatgttttatcat 84
>49911_osa-miRf10696-akr:pmrd
Length = 185
Score = 69.9 bits (35), Expect = 5e-13
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 75 atcatgttttatcatctaacaacaataaaaatacgaattatnnnnnnntttcatataaga 134
|||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 97 atcatgttttatcatctaacaacaatgaaaatactaattataaaaaattttcatataaga 156
Query: 135 cgga 138
||||
Sbjct: 157 cgga 160
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcat 89
|||||| ||| ||||||||||||||||||||||||
Sbjct: 67 aagtcacgcataaagtattaatcatgttttatcat 101
>49057_osa-miR812j:pmrd
Length = 297
Score = 65.9 bits (33), Expect = 8e-12
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 53 acaagtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatacgaat 112
|||||||| ||| ||| || || ||||||||||| |||||| |||||||||||||| |||
Sbjct: 122 acaagtcacgcataaactactattcatgttttataatctaataacaataaaaatactaat 181
Query: 113 tatnnnnnnntttcatataagacggatagttaaagttggaca 154
|| ||||| ||||||||||| |||||||||||||
Sbjct: 182 catacaaaaatttcaaataagacggatgattaaagttggaca 223
>49049_osa-miR812b:pmrd
Length = 170
Score = 65.9 bits (33), Expect = 8e-12
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 56 agtcatgcacaaagtattaatcatgttttatcatctaacaacaataaaaatac 108
||||| ||| |||||| || |||||||||||||||||| ||||||||||||||
Sbjct: 64 agtcacgcataaagtaatattcatgttttatcatctaataacaataaaaatac 116
>51120_osa-miRf11905-akr:pmrd
Length = 174
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 66 aaagtattaatcatgttttatcatctaacaa 96
|||||||||||||||||||||||||||||||
Sbjct: 97 aaagtattaatcatgttttatcatctaacaa 67
>48793_obt-miR812:pmrd
Length = 175
Score = 60.0 bits (30), Expect = 5e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaata 107
|||||| || |||||||||||||||||| |||||||||||||
Sbjct: 79 aaagtactattcatgttttatcatctaataacaataaaaata 120
>49050_osa-miR812c:pmrd
Length = 164
Score = 56.0 bits (28), Expect = 8e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 55 aagtcatgcacaaagtattaatcatgttttatcatctaacaacaataa 102
|||||||||| ||| ||||| |||||||||||||| |||||| |||||
Sbjct: 56 aagtcatgcataaaatattattcatgttttatcatttaacaataataa 103
>50654_osa-miRf11439-akr:pmrd
Length = 173
Score = 52.0 bits (26), Expect = 1e-07
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 66 aaagtattaatcatgttttatcatctaacaacaataaaaatacgaattat 115
||||| |||| |||| ||||||||||||||||||| ||| ||| ||||||
Sbjct: 97 aaagtgttaaccatgatttatcatctaacaacaatgaaagtactaattat 48
>49048_osa-miR812a:pmrd
Length = 234
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 76 tcatgttttatcatctaacaacaataaaaata 107
|||||||||||||| ||| |||||||||||||
Sbjct: 118 tcatgttttatcatgtaataacaataaaaata 87
>49052_osa-miR812e:pmrd
Length = 170
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 81 ttttatcatctaacaacaataaaaata 107
||||||||||||| |||||||||||||
Sbjct: 79 ttttatcatctaataacaataaaaata 53
>48800_oru-miR812:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 78 atgttttatcatctaacaacaataaaaata 107
|||||||||||||||| | |||||||||||
Sbjct: 90 atgttttatcatctaatagcaataaaaata 119
>51166_osa-miRf11951-akr:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 70 tattaatcatgttttatcatctaacaacaataaaaatacgaatta 114
||||| |||| ||||||||||||| || ||| ||||||| |||||
Sbjct: 81 tattattcatattttatcatctaaaaataatgaaaatactaatta 125
>49053_osa-miR812f:pmrd
Length = 179
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 79 tgttttatcatctaacaacaataaaaata 107
|||||||| |||||| |||||||||||||
Sbjct: 86 tgttttataatctaataacaataaaaata 58
>49054_osa-miR812g:pmrd
Length = 242
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 76 tcatgttttatcatctaacaacaataaaaatacgaattat 115
|||| |||||| |||| | |||||||||||||| ||||||
Sbjct: 119 tcatattttattatctcataacaataaaaatactaattat 158
