miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49845_osa-miRf10630-akr:pmrd
Length = 114
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgccggctcctggtattgggggaatctcagctttgctgaagcgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 agccaaggatgacttgccggctcctggtattgggggaatctcagctttgctgaagcgcct 43
Query: 61 tggagttagccggcaagtctgtccttggct 90
||||||||||||||||||||||||||||||
Sbjct: 42 tggagttagccggcaagtctgtccttggct 13
>48878_osa-miR169c:pmrd
Length = 112
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggctcctggtattgggggaatctcagctttgctgaagcgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggctcctggtattgggggaatctcagctttgctgaagcgcct 71
Query: 61 tggagttagccggcaagtctgtccttggct 90
||||||||||||||||||||||||||||||
Sbjct: 72 tggagttagccggcaagtctgtccttggct 101
>48309_bdi-miR169a:pmrd
Length = 121
Score = 71.9 bits (36), Expect = 7e-14
Identities = 79/90 (87%), Gaps = 5/90 (5%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggctcctggtattgggggaatctcagctttgctgaagcgcct 60
||||||||||||||||||| |||||||| |||||||||| |||||||| ||| ||||
Sbjct: 17 agccaaggatgacttgccgactcctggtgttgggggaattgcagctttgttga---gcct 73
Query: 61 tggagttagccggcaagtctgtccttggct 90
| ||||||||||||| || |||||||||||
Sbjct: 74 t-gagttagccggcaggt-tgtccttggct 101
>55020_zma-miR169r:pmrd
Length = 95
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggctcctgg 27
|||||||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggctcctgg 28
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 66 ttagccggcaagtctgtccttggct 90
|||| ||||||||||||||||||||
Sbjct: 70 ttagtcggcaagtctgtccttggct 94
>55005_zma-miR169c:pmrd
Length = 134
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggctcctgg 27
|||||||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccggctcctgg 48
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 66 ttagccggcaagtctgtccttggct 90
|||| ||||||||||||||||||||
Sbjct: 90 ttagtcggcaagtctgtccttggct 114
>54447_sbi-miR169k:pmrd
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggctcct 25
|||||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggctcct 26
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 66 ttagccggcaagtctgtccttggct 90
|||| ||||||||||||||||||||
Sbjct: 70 ttagtcggcaagtctgtccttggct 94
>55019_zma-miR169q:pmrd
Length = 69
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 6 agccaaggatgacttgccggc 26
>55018_zma-miR169p:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 4 agccaaggatgacttgccggc 24
>55016_zma-miR169n:pmrd
Length = 191
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 3 agccaaggatgacttgccggc 23
>54825_vvi-miR169w:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccggc 34
>54821_vvi-miR169s:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccggc 34
>54819_vvi-miR169q:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggc 33
>54818_vvi-miR169p:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggc 33
>54816_vvi-miR169n:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggc 33
>54815_vvi-miR169m:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggc 33
>54638_sof-miR169:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>54446_sbi-miR169j:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 4 agccaaggatgacttgccggc 24
>54091_ptc-miRf12269-akr:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 110 agccaaggatgacttgccggc 90
>52526_ptc-miRf10704-akr:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 109 agccaaggatgacttgccggc 89
>51676_ptc-miR169s:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggc 33
>51665_ptc-miR169h:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggc 32
>51664_ptc-miR169g:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggc 32
>51662_ptc-miR169e:pmrd
Length = 166
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggc 32
>51661_ptc-miR169d:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggc 32
>51339_phy-miR169:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 16 agccaaggatgacttgccggc 36
>50631_osa-miRf11416-akr:pmrd
Length = 141
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 122 agccaaggatgacttgccggc 102
>50630_osa-miRf11415-akr:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 23 agccaaggatgacttgccggc 43
>48891_osa-miR169p:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 115 agccaaggatgacttgccggc 95
>48880_osa-miR169e:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggc 32
>48640_gso-miR169g*:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>48639_gso-miR169a:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>48564_gma-miR169p:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>48561_gma-miR169a:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggc 21
|||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccggc 42
>55017_zma-miR169o:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 125 agccaaggatgacttgccgg 144
>54813_vvi-miR169k:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccgg 33
>54812_vvi-miR169j:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccgg 33
>54805_vvi-miR169c:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccgg 33
>54803_vvi-miR169a:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccgg 33
>54547_sly-miR169a:pmrd
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 42 agccaaggatgacttgccgg 61
>54438_sbi-miR169b:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgg 21
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggctcc 24
|||||||||||||||||| |||||
Sbjct: 16 agccaaggatgacttgcctgctcc 39
>51670_ptc-miR169m:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggctcc 24
|||||||||||||||||| |||||
Sbjct: 12 agccaaggatgacttgcctgctcc 35
>51666_ptc-miR169i:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccggctcc 24
|||||||||||||||||| |||||
Sbjct: 12 agccaaggatgacttgcctgctcc 35
>51663_ptc-miR169f:pmrd
Length = 239
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccgg 31
>48877_osa-miR169b:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccgg 31
>48310_bdi-miR169b:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 20 agccaaggatgacttgccgg 39
>48239_ath-miRf11139-akr:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgg 41
>47961_ath-miRf10861-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 6 agccaaggatgacttgccgg 25
>47674_ath-miRf10574-akr:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 111 agccaaggatgacttgccgg 92
>46967_ath-miR169g:pmrd
Length = 379
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 146 agccaaggatgacttgccgg 165
>46966_ath-miR169g:pmrd
Length = 379
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 146 agccaaggatgacttgccgg 165
>46965_ath-miR169f:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 34 agccaaggatgacttgccgg 53
>46962_ath-miR169c:pmrd
Length = 411
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 114 agccaaggatgacttgccgg 133
>46961_ath-miR169b:pmrd
Length = 181
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 44 agccaaggatgacttgccgg 63
>46875_aqc-miR169c:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgg 20
||||||||||||||||||||
Sbjct: 6 agccaaggatgacttgccgg 25
