miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40425_gma-MIR156a:mirbase
          Length = 122

 Score =  153 bits (77), Expect = 2e-38
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagaagagagtgagcacatgctagtggtatttgtatgagggcatacaattgcgggtgcgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24  cagaagagagtgagcacatgctagtggtatttgtatgagggcatacaattgcgggtgcgt 83

                            
Query: 61  gctcacttctctatctg 77
           |||||||||||||||||
Sbjct: 84  gctcacttctctatctg 100




>40656_mtr-MIR156i:mirbase
          Length = 93

 Score = 58.0 bits (29), Expect = 9e-10
 Identities = 66/77 (85%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagaagagagtgagcacatgctagtggtatttgtatgagggcatacaattgcgggtgcgt 60
          |||||||||||||||||||||| |  ||  ||||||||  ||||||||||   |||||||
Sbjct: 9  cagaagagagtgagcacatgct-gcagtgattgtatgatagcatacaattcttggtgcgt 67

                           
Query: 61 gctcacttctctatctg 77
          |||||||||||| ||||
Sbjct: 68 gctcacttctctttctg 84




>41082_tcc-MIR156c:mirbase
          Length = 121

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 49 ttgcgggtgcgtgctcacttctct 72
          ||||||||||||||||||||||||
Sbjct: 71 ttgcgggtgcgtgctcacttctct 94




>41564_vvi-MIR156d:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  cagaagagagtgagcacatgc 21
          |||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacatgc 34




>41293_ptc-MIR156f:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagaagagagtgagcacatgctagtggtatttgtatgagggcatacaattgc-gggtgcg 59
          ||||||||||||||||||  | |  | || ||||||||  |||||| ||||| ||||| |
Sbjct: 14 cagaagagagtgagcacacacgaaagctaattgtatgaaagcataccattgcagggtgtg 73

                       
Query: 60 tgctcacttctct 72
          |||||||||||||
Sbjct: 74 tgctcacttctct 86




>40003_ath-MIR156b:mirbase
          Length = 183

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  cagaagagagtgagcacatgc 21
          |||||||||||||||||||||
Sbjct: 50 cagaagagagtgagcacatgc 70




>39791_aly-MIR156b:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  cagaagagagtgagcacatgc 21
          |||||||||||||||||||||
Sbjct: 16 cagaagagagtgagcacatgc 36




>40651_mtr-MIR156d:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  cagaagagagtgagcacat 19
          |||||||||||||||||||
Sbjct: 9  cagaagagagtgagcacat 27