miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45392_miR172:micropc
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 gtgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggttaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggttaatg 60
Query: 61 ggtaatgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||||||
Sbjct: 61 ggtaatgagaatcttgatgatgctgcat 88
>46487_miR172:micropc
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 2 tgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggttaatgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggttaatgg 60
Query: 62 gtaatgagaatcttgatgatgctgca 87
||||||||||||||||||||||||||
Sbjct: 61 gtaatgagaatcttgatgatgctgca 86
>44791_miR172:micropc
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 2 tgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggttaatgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggttaatgg 60
Query: 62 gtaatgagaatcttgatgatgctgca 87
||||||||||||||||||||||||||
Sbjct: 61 gtaatgagaatcttgatgatgctgca 86
>46413_miR172:micropc
Length = 88
Score = 167 bits (84), Expect = 2e-42
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 1 gtgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggttaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gtgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggtcaatg 60
Query: 61 ggtaatgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||||||
Sbjct: 61 ggtaatgagaatcttgatgatgctgcat 88
>46305_miR172:micropc
Length = 88
Score = 167 bits (84), Expect = 2e-42
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 1 gtgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggttaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gtgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggtcaatg 60
Query: 61 ggtaatgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||||||
Sbjct: 61 ggtaatgagaatcttgatgatgctgcat 88
>45569_miR172:micropc
Length = 86
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 2 tgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggttaatgg 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggtcaatgg 60
Query: 62 gtaatgagaatcttgatgatgctgca 87
||||||||||||||||||||||||||
Sbjct: 61 gtaatgagaatcttgatgatgctgca 86
>44830_miR172:micropc
Length = 86
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 2 tgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggttaatgg 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tgcggcatcttcaagattcacatgccaatattcaactctagataagtttttggtcaatgg 60
Query: 62 gtaatgagaatcttgatgatgctgca 87
||||||||||||||||||||||||||
Sbjct: 61 gtaatgagaatcttgatgatgctgca 86
>44866_miR172:micropc
Length = 128
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgcat 88
||||||||||||||||||||||||
Sbjct: 105 atgagaatcttgatgatgctgcat 128
>46569_miR172:micropc
Length = 126
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 atgagaatcttgatgatgctgca 87
|||||||||||||||||||||||
Sbjct: 104 atgagaatcttgatgatgctgca 126
>46620_miR172:micropc
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 gagaatcttgatgatgctgcat 88
||||||||||||||||||||||
Sbjct: 85 gagaatcttgatgatgctgcat 106
>46276_miR172:micropc
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgca 87
||||||||||||||||||||||
Sbjct: 83 tgagaatcttgatgatgctgca 104
>46108_miR172:micropc
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgca 87
||||||||||||||||||||||
Sbjct: 83 tgagaatcttgatgatgctgca 104
>45323_miR172:micropc
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 tgagaatcttgatgatgctgca 87
||||||||||||||||||||||
Sbjct: 83 tgagaatcttgatgatgctgca 104
>46277_miR172:micropc
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 gagaatcttgatgatgctgca 87
|||||||||||||||||||||
Sbjct: 84 gagaatcttgatgatgctgca 104
>45834_miR172:micropc
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 gagaatcttgatgatgctgca 87
|||||||||||||||||||||
Sbjct: 84 gagaatcttgatgatgctgca 104
>45550_miR172:micropc
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 gagaatcttgatgatgctgca 87
|||||||||||||||||||||
Sbjct: 84 gagaatcttgatgatgctgca 104
>45458_miR172:micropc
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 gagaatcttgatgatgctgca 87
|||||||||||||||||||||
Sbjct: 84 gagaatcttgatgatgctgca 104
