miRNEST 2.0, an integrative microRNA resource :: BLAST
>40311_bra-MIR159a:mirbase
Length = 185
Score = 270 bits (136), Expect = 3e-73
Identities = 166/176 (94%)
Strand = Plus / Plus
Query: 1 gggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatgga 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 6 gggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaa 65
Query: 61 taccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcatatctca 120
| |||||||||||||||||| ||| |||||||| ||||| ||||||||| |||||||||
Sbjct: 66 tcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctca 125
Query: 121 ggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 181
>40261_bna-MIR159:mirbase
Length = 183
Score = 270 bits (136), Expect = 3e-73
Identities = 166/176 (94%)
Strand = Plus / Plus
Query: 1 gggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatgga 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 4 gggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaa 63
Query: 61 taccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcatatctca 120
| |||||||||||||||||| ||| |||||||| ||||| ||||||||| |||||||||
Sbjct: 64 tcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctca 123
Query: 121 ggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 179
>39804_aly-MIR159a:mirbase
Length = 222
Score = 228 bits (115), Expect = 1e-60
Identities = 162/177 (91%), Gaps = 3/177 (1%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 62
||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 25 gctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagctatggatc 84
Query: 63 ccataagccctaatccttgtattg---aaaaaggacttggtaatatggcttgcatatctc 119
|||||||||||||||||| || | |||||||| ||||| ||||||||||||||||||
Sbjct: 85 ccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttgcatatctc 144
Query: 120 aggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctc 176
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 145 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 201
>40016_ath-MIR159a:mirbase
Length = 184
Score = 224 bits (113), Expect = 2e-59
Identities = 161/176 (91%), Gaps = 2/176 (1%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 62
|||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||
Sbjct: 6 gctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatggatc 65
Query: 63 ccataagccctaatccttgtattg--aaaaaggacttggtaatatggcttgcatatctca 120
||||||||||||||||||||| | |||||||| ||||| |||||| ||||||||||||
Sbjct: 66 ccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcatatctca 125
Query: 121 ggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 181
>39805_aly-MIR159b:mirbase
Length = 202
Score = 77.8 bits (39), Expect = 3e-15
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 103 tatggcttgcatatctcaggagctttaacttaccc-tttaattgcttttactcttctttg 161
||||| || ||||||||||||||||| |||||||| |||||| |||| |||||||||||
Sbjct: 114 tatggattccatatctcaggagctttcacttacccctttaatggcttc-actcttctttg 172
Query: 162 gattgaagggagctc 176
|||||||||||||||
Sbjct: 173 gattgaagggagctc 187
Score = 67.9 bits (34), Expect = 2e-12
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 62
||||||| ||||||| ||| ||||||| |||||||| ||||||||||||||||||||
Sbjct: 19 gctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatggatc 78
Query: 63 ccataa 68
||||||
Sbjct: 79 ccataa 84
>40017_ath-MIR159b:mirbase
Length = 196
Score = 75.8 bits (38), Expect = 1e-14
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 112 catatctcaggagctttaacttaccc-tttaattgcttttactcttctttggattgaagg 170
||||||||||||||||| |||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 171 gagctc 176
||||||
Sbjct: 181 gagctc 186
Score = 65.9 bits (33), Expect = 1e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 62
||||||| ||||||| ||| ||||||| |||| ||| ||||||||||||||||||||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 63 ccataagcc 71
|||||||||
Sbjct: 67 ccataagcc 75
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 106 ggcttgcatatctcaggagcttta 129
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 106 ggcttgcatatctcaggagcttta 129
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 106 ggcttgcatatctcaggagcttta 129
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>40432_gma-MIR159a:mirbase
Length = 214
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctc 193
>40338_rco-MIR159:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 tggcttgcatatctcaggagctt 127
|||||||||||||||||||||||
Sbjct: 109 tggcttgcatatctcaggagctt 131
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 105 tggcttgcatatctcaggagct 126
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 ttctttggattgaagggagctc 176
||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctc 170
>42695_zma-MIR159f:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctc 212
>42690_zma-MIR159a:mirbase
Length = 246
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctc 225
>42635_tae-MIR159b:mirbase
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctc 248
>42494_sbi-MIR159:mirbase
Length = 226
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctc 222
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctc 241
>42455_sof-MIR159d:mirbase
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>42453_sof-MIR159b:mirbase
Length = 266
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctc 245
>42452_sof-MIR159a:mirbase
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>41918_osa-MIR159b:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctc 176
>41917_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>41916_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>41868_far-MIR159:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctc 187
>41528_sly-MIR159:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 ttgcatatctcaggagctttaacttacccttt 140
|||||||| |||||||||||| |||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacccttt 144
