miRNEST 2.0, an integrative microRNA resource :: BLAST
>48395_bra-miR159a:pmrd
Length = 185
Score = 270 bits (136), Expect = 3e-73
Identities = 166/176 (94%)
Strand = Plus / Plus
Query: 1 gggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatgga 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 6 gggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaa 65
Query: 61 taccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcatatctca 120
| |||||||||||||||||| ||| |||||||| ||||| ||||||||| |||||||||
Sbjct: 66 tcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctca 125
Query: 121 ggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 181
>48339_bna-miR159:pmrd
Length = 183
Score = 270 bits (136), Expect = 3e-73
Identities = 166/176 (94%)
Strand = Plus / Plus
Query: 1 gggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatgga 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 4 gggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaa 63
Query: 61 taccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcatatctca 120
| |||||||||||||||||| ||| |||||||| ||||| ||||||||| |||||||||
Sbjct: 64 tcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctca 123
Query: 121 ggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 179
>46931_ath-miR159a:pmrd
Length = 184
Score = 224 bits (113), Expect = 2e-59
Identities = 161/176 (91%), Gaps = 2/176 (1%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 62
|||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||
Sbjct: 6 gctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatggatc 65
Query: 63 ccataagccctaatccttgtattg--aaaaaggacttggtaatatggcttgcatatctca 120
||||||||||||||||||||| | |||||||| ||||| |||||| ||||||||||||
Sbjct: 66 ccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcatatctca 125
Query: 121 ggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 181
>46932_ath-miR159b:pmrd
Length = 196
Score = 75.8 bits (38), Expect = 1e-14
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 112 catatctcaggagctttaacttaccc-tttaattgcttttactcttctttggattgaagg 170
||||||||||||||||| |||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 171 gagctc 176
||||||
Sbjct: 181 gagctc 186
Score = 65.9 bits (33), Expect = 1e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 62
||||||| ||||||| ||| ||||||| |||| ||| ||||||||||||||||||||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 63 ccataagcc 71
|||||||||
Sbjct: 67 ccataagcc 75
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 106 ggcttgcatatctcaggagcttta 129
||||||||||||||||||||||||
Sbjct: 104 ggcttgcatatctcaggagcttta 127
>51604_ptc-miR159c:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 106 ggcttgcatatctcaggagcttta 129
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
>51603_ptc-miR159b:pmrd
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 106 ggcttgcatatctcaggagcttta 129
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
>51602_ptc-miR159a:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 106 ggcttgcatatctcaggagcttta 129
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
>54378_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>54377_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>48539_gma-miR159a:pmrd
Length = 214
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctc 193
>54777_vvi-miR159c:pmrd
Length = 190
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 105 tggcttgcatatctcaggagct 126
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 ttctttggattgaagggagctc 176
||||||||||||||||||||||
Sbjct: 145 ttctttggattgaagggagctc 166
>54930_zma-miR159a:pmrd
Length = 246
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctc 225
>54674_tae-miR159b:pmrd
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctc 248
>54631_sof-miR159d:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>54629_sof-miR159b:pmrd
Length = 266
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctc 245
>54628_sof-miR159a:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>54392_sar-miR159:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctc 173
>51338_pgl-miR159:pmrd
Length = 226
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctc 224
>48825_osa-miR159m:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctc 247
>48820_osa-miR159b:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctc 176
>48819_osa-miR159a:pmrd
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>48796_oru-miR159:pmrd
Length = 274
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 ttgcatatctcaggagctttaacttacccttt 140
|||||||| |||||||||||| |||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacccttt 144
