miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 125 bits (63), Expect = 1e-29
Identities = 153/180 (85%), Gaps = 11/180 (6%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 tcccacagccctatctcat-aataaagactctagtcttcttggataggcttgtggcttgc 119
||||||||||||||| | | ||| | | | |||||||||||||||||||||
Sbjct: 70 tcccacagccctatcccgtcaatgggg------ggc--attggataggcttgtggcttgc 121
Query: 120 atatctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagctct 179
|||||||||||||| ||||| || | |||||||||||||||||||||||||||||||
Sbjct: 122 atatctcaggagctgcatta--tccaagtttagatccttgtttggattgaagggagctct 179
>51603_ptc-miR159b:pmrd
Length = 187
Score = 109 bits (55), Expect = 7e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||| | || |||||||||||| |||||||||||||||| |
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 71
Query: 61 tcccacagccctatc 75
|||||||||||||||
Sbjct: 72 tcccacagccctatc 86
>54378_pvu-miR159:pmrd
Length = 174
Score = 103 bits (52), Expect = 4e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
|||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacag 68
||||||||
Sbjct: 63 tcccacag 70
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 153 atccttgtttggattgaagggagctct 179
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 103 bits (52), Expect = 4e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
|||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacag 68
||||||||
Sbjct: 63 tcccacag 70
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 153 atccttgtttggattgaagggagctct 179
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 103 bits (52), Expect = 4e-23
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||
Sbjct: 7 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 66
Query: 61 tcccacagccctatct 76
| |||||| |||||||
Sbjct: 67 t-ccacagtcctatct 81
>51604_ptc-miR159c:pmrd
Length = 183
Score = 103 bits (52), Expect = 4e-23
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcccacagccctatct 76
| |||||| |||||||
Sbjct: 72 t-ccacagtcctatct 86
>51602_ptc-miR159a:pmrd
Length = 183
Score = 103 bits (52), Expect = 4e-23
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcccacagccctatct 76
| |||||| |||||||
Sbjct: 72 t-ccacagtcctatct 86
>48539_gma-miR159a:pmrd
Length = 214
Score = 95.6 bits (48), Expect = 1e-20
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
|||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 tcccacag 68
||||||||
Sbjct: 82 tcccacag 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 155 ccttgtttggattgaagggagctct 179
|||| ||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctct 194
>54540_sly-miR159:pmrd
Length = 177
Score = 56.0 bits (28), Expect = 9e-09
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||| | | |||| | || || ||||||||||||| |||||||
Sbjct: 2 ggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgga 61
Query: 61 tcccacagccctatct 76
| || |||||||||||
Sbjct: 62 ttcctcagccctatct 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 147 tgttagatccttgtttggattgaagggagctct 179
|||| |||| || ||||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctct 176
>54931_zma-miR159b:pmrd
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>54673_tae-miR159a:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>48657_hvv-miR159b:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>54937_zma-miR159m:pmrd
Length = 457
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctct 179
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54930_zma-miR159a:pmrd
Length = 246
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctct 179
||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctct 179
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>54653_spr-miR159:pmrd
Length = 392
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctct 179
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54631_sof-miR159d:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctct 179
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctct 179
||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctct 179
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctct 179
||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 gataggcttgtggcttgcat 121
||||||||||||||||||||
Sbjct: 150 gataggcttgtggcttgcat 169
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctct 179
||||||||||||||||||||
Sbjct: 206 tttggattgaagggagctct 225
