miRNEST 2.0, an integrative microRNA resource :: BLAST
>54376_pvi-miR444:pmrd
Length = 127
Score = 153 bits (77), Expect = 5e-38
Identities = 112/124 (90%), Gaps = 6/124 (4%)
Strand = Plus / Plus
Query: 21 ggtgacaagcttgtggcagcaactgcacatcttgcaagaaaatctttagggtttttcaga 80
||||||||||| | ||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 10 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaatt------ggttttcaga 63
Query: 81 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctt 140
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ccatacctatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctt 123
Query: 141 tgcc 144
||||
Sbjct: 124 tgcc 127
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 26 caagcttgtggcagcaactgcacatcttgcaagaaaatc 64
|||||||| | || |||||||||| ||||||||||||||
Sbjct: 112 caagcttgagacaacaactgcacaacttgcaagaaaatc 74
>49007_osa-miR444f:pmrd
Length = 154
Score = 81.8 bits (41), Expect = 1e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 89 atgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 137
|||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 105 atgactttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 26 caagcttgtggcagcaactgcacatcttgcaagaaa 61
|||||||| |||| |||||||||| |||||||||||
Sbjct: 145 caagcttgaggcaacaactgcacaacttgcaagaaa 110
>48798_oru-miR444:pmrd
Length = 165
Score = 81.8 bits (41), Expect = 1e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 89 atgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 137
|||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 110 atgactttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 158
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 26 caagcttgtggcagcaactgcacatcttgcaagaaa 61
|||||||| |||| |||||||||| |||||||||||
Sbjct: 150 caagcttgaggcaacaactgcacaacttgcaagaaa 115
>54691_tae-miR444:pmrd
Length = 426
Score = 79.8 bits (40), Expect = 5e-16
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 94 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgccaaaactatc 153
|||||||||||| |||||||| || |||||||||||||||||||||||||||| |||||
Sbjct: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgccaaagctatc 193
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 26 caagcttgtggcagcaactgcacatcttgcaagaaa 61
|||||||| ||||||||||||| |||||||||||
Sbjct: 169 caagcttgaggcagcaactgcatgacttgcaagaaa 134
>54742_tae-miR2024a:pmrd
Length = 118
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 94 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 137
||||| |||||||||||||||| |||||||||||||||| ||||
Sbjct: 75 tttctcgcaagttgtgcagttgctgtctcaagcttgctgactcc 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 26 caagcttgtggcagcaactgcacatcttgcaagaaa 61
|||||||| | ||||||||||||| ||||| |||||
Sbjct: 110 caagcttgagacagcaactgcacaacttgcgagaaa 75
>55114_zma-miR444a:pmrd
Length = 138
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 120 ctcaagcttgctgcctccctttgccaaa 147
||||||||||||||||||||||||||||
Sbjct: 8 ctcaagcttgctgcctccctttgccaaa 35
>54743_tae-miR2024b:pmrd
Length = 142
Score = 56.0 bits (28), Expect = 8e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 94 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 137
|||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 99 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 142
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 26 caagcttgtggcagcaactgcacatcttgcaagaaa 61
|||||||| ||||||||||||| |||||||||||
Sbjct: 134 caagcttgaggcagcaactgcatgacttgcaagaaa 99
>55115_zma-miR444b:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 120 ctcaagcttgctgcctccctttgccaaa 147
||||||||| ||||||||||||||||||
Sbjct: 8 ctcaagcttcctgcctccctttgccaaa 35
>48319_bdi-miR444:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 102 aagttgtgcagttgttgtctcaagcttgctgc 133
||||| |||||||| || ||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
