miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>44925_miR536:micropc
Length = 118
Score = 234 bits (118), Expect = 1e-62
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1 gatgcactcagcttgacacggccgtgcttggaagtctggaaagttttctttcacgctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgcactcagcttgacacggccgtgcttggaagtctggaaagttttctttcacgctcca 60
Query: 61 ctgatgctgctgctgcaatgcgtgctctctctcttggtcgtgtcaagctgtgtgcatc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgatgctgctgctgcaatgcgtgctctctctcttggtcgtgtcaagctgtgtgcatc 118
>46588_miR536:micropc
Length = 124
Score = 176 bits (89), Expect = 2e-45
Identities = 114/124 (91%), Gaps = 10/124 (8%)
Strand = Plus / Plus
Query: 3 tgcactcagcttgacacggccgtgcttggaagtctggaaagttttctttcacgctccact 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcactcagcttgacacggccgtgcttggaagtctggaaagttttctttcacgctccact 60
Query: 63 gatgctgctgctgcaatgcgtg----------ctctctctcttggtcgtgtcaagctgtg 112
|||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 gatgctgctgctgcaatgcgtgctgactctctctctctctcttggtcgtgtcaagctgtg 120
Query: 113 tgca 116
||||
Sbjct: 121 tgca 124
>44889_miR536:micropc
Length = 124
Score = 176 bits (89), Expect = 2e-45
Identities = 114/124 (91%), Gaps = 10/124 (8%)
Strand = Plus / Plus
Query: 3 tgcactcagcttgacacggccgtgcttggaagtctggaaagttttctttcacgctccact 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcactcagcttgacacggccgtgcttggaagtctggaaagttttctttcacgctccact 60
Query: 63 gatgctgctgctgcaatgcgtg----------ctctctctcttggtcgtgtcaagctgtg 112
|||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 gatgctgctgctgcaatgcgtgctgactctctctctctctcttggtcgtgtcaagctgtg 120
Query: 113 tgca 116
||||
Sbjct: 121 tgca 124
