miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54764_vun-miR1507b:pmrd
Length = 109
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 cagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcatcggttctttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcatcggttctttct 71
Query: 61 ttcctctctcattccatacatcgtctga 88
||||||||||||||||||||||||||||
Sbjct: 72 ttcctctctcattccatacatcgtctga 99
>54763_vun-miR1507a:pmrd
Length = 109
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 1 cagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcatcggttctttct 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 12 cagaggtgtatggagtgagagaagggaaaaacgcctttgccgatctcatcggttcttttt 71
Query: 61 ttcctctctcattccatacatcgtctga 88
||||||||||||||||||||||||||||
Sbjct: 72 ttcctctctcattccatacatcgtctga 99
>48589_gma-miR1507b:pmrd
Length = 98
Score = 63.9 bits (32), Expect = 2e-11
Identities = 75/88 (85%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 cagaggtgtatggagtgagagaagggaaaaacgcctttcccgatctcatcggttctttct 60
||||| ||||||||||||||||||||||| ||||| |||| ||||| | || |||
Sbjct: 7 cagagatgtatggagtgagagaagggaaatgatattttcc-gatcccatcgttactctct 65
Query: 61 ttcctctctcattccatacatcgtctga 88
| ||||||||||||||||||||||||||
Sbjct: 66 tccctctctcattccatacatcgtctga 93
>48588_gma-miR1507a:pmrd
Length = 107
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 cagaggtgtatggagtgagagaagggaaa 29
|||||||||||||||||||||||||||||
Sbjct: 11 cagaggtgtatggagtgagagaagggaaa 39
