miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00638;MIR159;AARH01006065.1/468133-468327 3694:Populus
           trichocarpa
          Length = 195

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 142 atctttttgggattggggtgaagggagctcc 172
           ||||||||||  |||||||||||||||||||
Sbjct: 152 atctttttggtcttggggtgaagggagctcc 182




>RF00638;MIR159;ABIM01022236.1/33140-32940 3649:Carica papaya
           (papaya)
          Length = 201

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 142 atctttttgggattggggtgaagggagctc 171
           |||||||||| ||||| |||||||||||||
Sbjct: 158 atctttttggtattggagtgaagggagctc 187