miRNEST 2.0, an integrative microRNA resource :: BLAST
>41917_osa-MIR159a:mirbase
Length = 272
Score = 502 bits (253), Expect = e-143
Identities = 264/267 (98%), Gaps = 3/267 (1%)
Strand = Plus / Plus
Query: 1 tgtggacgttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgtggacgttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgc 62
Query: 61 tgggtcatggatcccgttagcctactccatgttcatcattcagctcgagatctgaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgggtcatggatcccgttagcctactccatgttcatcattcagctcgagatctgaaagaa 122
Query: 121 actactccaatttatactaatagtatgtgtgtagataggaaaatgatggagtactc---g 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 123 actactccaatttatactaatagtatgtgtgtagataggaaaatgatggagtactcgttg 182
Query: 178 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242
Query: 238 ttggattgaagggagctctgcatcttt 264
|||||||||||||||||||||||||||
Sbjct: 243 ttggattgaagggagctctgcatcttt 269
>41916_osa-MIR159a:mirbase
Length = 272
Score = 502 bits (253), Expect = e-143
Identities = 264/267 (98%), Gaps = 3/267 (1%)
Strand = Plus / Plus
Query: 1 tgtggacgttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgtggacgttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgc 62
Query: 61 tgggtcatggatcccgttagcctactccatgttcatcattcagctcgagatctgaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgggtcatggatcccgttagcctactccatgttcatcattcagctcgagatctgaaagaa 122
Query: 121 actactccaatttatactaatagtatgtgtgtagataggaaaatgatggagtactc---g 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 123 actactccaatttatactaatagtatgtgtgtagataggaaaatgatggagtactcgttg 182
Query: 178 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242
Query: 238 ttggattgaagggagctctgcatcttt 264
|||||||||||||||||||||||||||
Sbjct: 243 ttggattgaagggagctctgcatcttt 269
>42635_tae-MIR159b:mirbase
Length = 255
Score = 478 bits (241), Expect = e-135
Identities = 252/255 (98%), Gaps = 3/255 (1%)
Strand = Plus / Plus
Query: 11 gagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcatgg 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcatgg 60
Query: 71 atcccgttagcctactccatgttcatcattcagctcgagatctgaaagaaactactccaa 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcccgttagcctactccatgttcatcattcagctcgagatctgaaagaaactactccaa 120
Query: 131 tttatactaatagtatgtgtgtagataggaaaatgatggagtactc---gttgggatagg 187
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 tttatactaatagtatgtgtgtagataggaaaatgatggagtactcgttgttgggatagg 180
Query: 188 cttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattgaa 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattgaa 240
Query: 248 gggagctctgcatct 262
|||||||||||||||
Sbjct: 241 gggagctctgcatct 255
>41918_osa-MIR159b:mirbase
Length = 188
Score = 60.0 bits (30), Expect = 9e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatctt 263
||||||||||||||||||||||||||||||
Sbjct: 155 ctctttggattgaagggagctctgcatctt 184
>41868_far-MIR159:mirbase
Length = 200
Score = 60.0 bits (30), Expect = 9e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatctt 263
||||||||||||||||||||||||||||||
Sbjct: 166 ctctttggattgaagggagctctgcatctt 195
>42690_zma-MIR159a:mirbase
Length = 246
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatc 261
||||||||||||||||||||||||||||
Sbjct: 204 ctctttggattgaagggagctctgcatc 231
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatc 261
||||||||||||||||||||||||||||
Sbjct: 220 ctctttggattgaagggagctctgcatc 247
>42455_sof-MIR159d:mirbase
Length = 265
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatc 261
||||||||||||||||||||||||||||
Sbjct: 223 ctctttggattgaagggagctctgcatc 250
>42453_sof-MIR159b:mirbase
Length = 266
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatc 261
||||||||||||||||||||||||||||
Sbjct: 224 ctctttggattgaagggagctctgcatc 251
>42452_sof-MIR159a:mirbase
Length = 265
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatc 261
||||||||||||||||||||||||||||
Sbjct: 223 ctctttggattgaagggagctctgcatc 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 54.0 bits (27), Expect = 6e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgcatctt 263
|||||||||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctctgcatctt 208
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 54.0 bits (27), Expect = 6e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgcatctt 263
|||||||||||||||||||||||||||
Sbjct: 11 tttggattgaagggagctctgcatctt 37
>42494_sbi-MIR159:mirbase
Length = 226
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgca 259
||||||||||||||||||||||||||
Sbjct: 201 ctctttggattgaagggagctctgca 226
>42695_zma-MIR159f:mirbase
Length = 215
Score = 50.1 bits (25), Expect = 9e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgc 258
|||||||||||||||||||||||||
Sbjct: 191 ctctttggattgaagggagctctgc 215
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 9e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctctgcatctt 263
|||||||||||||||||||||| ||||||
Sbjct: 150 tctttggattgaagggagctctacatctt 178
>39804_aly-MIR159a:mirbase
Length = 222
Score = 50.1 bits (25), Expect = 9e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctctgcatctt 263
|||||||||||||||||||||| ||||||
Sbjct: 181 tctttggattgaagggagctctacatctt 209
>42634_tae-MIR159a:mirbase
Length = 177
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgcat 260
||||||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctctgcat 177
>40017_ath-MIR159b:mirbase
Length = 196
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctctgcatct 262
|||||||||||||||||||||| |||||
Sbjct: 166 tctttggattgaagggagctcttcatct 193
>39805_aly-MIR159b:mirbase
Length = 202
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctctgcatct 262
|||||||||||||||||||||| |||||
Sbjct: 167 tctttggattgaagggagctcttcatct 194
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgca 259
|||||||||||||||||||||||
Sbjct: 156 tttggattgaagggagctctgca 178
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgc 258
||||||||||||||||||||||
Sbjct: 179 tttggattgaagggagctctgc 200
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgc 258
||||||||||||||||||||||
Sbjct: 231 tttggattgaagggagctctgc 252
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 173 tctttggattgaagggagctct 194
>40338_rco-MIR159:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgcatct 262
|||||||||||||||||||| |||||
Sbjct: 155 tttggattgaagggagctctacatct 180
>40311_bra-MIR159a:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 159 tctttggattgaagggagctct 180
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 181 ggataggcttatggcttgcatgccccaggagctgcat 217
|||||||||| |||||||||| | ||||||||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagctgcat 139
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctct 256
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 232 ccctctttggattgaagggagctct 256
|||| ||||||||||||||||||||
Sbjct: 149 ccctttttggattgaagggagctct 173
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 232 ccctctttggattgaagggagctct 256
|||| ||||||||||||||||||||
Sbjct: 149 ccctttttggattgaagggagctct 173
