miRNEST 2.0, an integrative microRNA resource :: BLAST
>48819_osa-miR159a:pmrd
Length = 272
Score = 502 bits (253), Expect = e-143
Identities = 264/267 (98%), Gaps = 3/267 (1%)
Strand = Plus / Plus
Query: 1 tgtggacgttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgtggacgttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgc 62
Query: 61 tgggtcatggatcccgttagcctactccatgttcatcattcagctcgagatctgaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgggtcatggatcccgttagcctactccatgttcatcattcagctcgagatctgaaagaa 122
Query: 121 actactccaatttatactaatagtatgtgtgtagataggaaaatgatggagtactc---g 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 123 actactccaatttatactaatagtatgtgtgtagataggaaaatgatggagtactcgttg 182
Query: 178 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242
Query: 238 ttggattgaagggagctctgcatcttt 264
|||||||||||||||||||||||||||
Sbjct: 243 ttggattgaagggagctctgcatcttt 269
>48796_oru-miR159:pmrd
Length = 274
Score = 502 bits (253), Expect = e-143
Identities = 264/267 (98%), Gaps = 3/267 (1%)
Strand = Plus / Plus
Query: 1 tgtggacgttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgtggacgttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgc 62
Query: 61 tgggtcatggatcccgttagcctactccatgttcatcattcagctcgagatctgaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgggtcatggatcccgttagcctactccatgttcatcattcagctcgagatctgaaagaa 122
Query: 121 actactccaatttatactaatagtatgtgtgtagataggaaaatgatggagtactc---g 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 123 actactccaatttatactaatagtatgtgtgtagataggaaaatgatggagtactcgttg 182
Query: 178 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242
Query: 238 ttggattgaagggagctctgcatcttt 264
|||||||||||||||||||||||||||
Sbjct: 243 ttggattgaagggagctctgcatcttt 269
>48825_osa-miR159m:pmrd
Length = 249
Score = 486 bits (245), Expect = e-138
Identities = 248/249 (99%)
Strand = Plus / Plus
Query: 9 ttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcat 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcat 60
Query: 69 ggatcccgttagcctactccatgttcatcattcagctcgagatctgaaagaaactactcc 128
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggatcccgttagactactccatgttcatcattcagctcgagatctgaaagaaactactcc 120
Query: 129 aatttatactaatagtatgtgtgtagataggaaaatgatggagtactcgttgggataggc 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatttatactaatagtatgtgtgtagataggaaaatgatggagtactcgttgggataggc 180
Query: 189 ttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattgaag 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattgaag 240
Query: 249 ggagctctg 257
|||||||||
Sbjct: 241 ggagctctg 249
>54674_tae-miR159b:pmrd
Length = 255
Score = 478 bits (241), Expect = e-135
Identities = 252/255 (98%), Gaps = 3/255 (1%)
Strand = Plus / Plus
Query: 11 gagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcatgg 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcatgg 60
Query: 71 atcccgttagcctactccatgttcatcattcagctcgagatctgaaagaaactactccaa 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcccgttagcctactccatgttcatcattcagctcgagatctgaaagaaactactccaa 120
Query: 131 tttatactaatagtatgtgtgtagataggaaaatgatggagtactc---gttgggatagg 187
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 tttatactaatagtatgtgtgtagataggaaaatgatggagtactcgttgttgggatagg 180
Query: 188 cttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattgaa 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattgaa 240
Query: 248 gggagctctgcatct 262
|||||||||||||||
Sbjct: 241 gggagctctgcatct 255
>48820_osa-miR159b:pmrd
Length = 188
Score = 60.0 bits (30), Expect = 9e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatctt 263
||||||||||||||||||||||||||||||
Sbjct: 155 ctctttggattgaagggagctctgcatctt 184
>54930_zma-miR159a:pmrd
Length = 246
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatc 261
||||||||||||||||||||||||||||
Sbjct: 204 ctctttggattgaagggagctctgcatc 231
>54631_sof-miR159d:pmrd
Length = 265
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatc 261
||||||||||||||||||||||||||||
Sbjct: 223 ctctttggattgaagggagctctgcatc 250
>54629_sof-miR159b:pmrd
Length = 266
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatc 261
||||||||||||||||||||||||||||
Sbjct: 224 ctctttggattgaagggagctctgcatc 251
>54628_sof-miR159a:pmrd
Length = 265
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctgcatc 261
||||||||||||||||||||||||||||
Sbjct: 223 ctctttggattgaagggagctctgcatc 250
>54931_zma-miR159b:pmrd
Length = 221
Score = 54.0 bits (27), Expect = 6e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgcatctt 263
|||||||||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctctgcatctt 208
>48656_hvv-miR159a:pmrd
Length = 303
Score = 54.0 bits (27), Expect = 6e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgcatctt 263
|||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatctt 27
>54937_zma-miR159m:pmrd
Length = 457
Score = 50.1 bits (25), Expect = 9e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgcatc 261
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54653_spr-miR159:pmrd
Length = 392
Score = 50.1 bits (25), Expect = 9e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgcatc 261
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>51338_pgl-miR159:pmrd
Length = 226
Score = 50.1 bits (25), Expect = 9e-07
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 182 gataggcttatggcttgcatgccccaggagctgcatcaaccc-tacatggaccctctttg 240
||||||||| ||||||||||| || |||||||||| | ||| | ||| | |||||||
Sbjct: 150 gataggcttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctttg 209
Query: 241 gattgaagggagctctg 257
|||||||||||||||||
Sbjct: 210 gattgaagggagctctg 226
>54673_tae-miR159a:pmrd
Length = 177
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgcat 260
||||||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctctgcat 177
>54392_sar-miR159:pmrd
Length = 175
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 234 ctctttggattgaagggagctctg 257
||||||||||||||||||||||||
Sbjct: 152 ctctttggattgaagggagctctg 175
>46932_ath-miR159b:pmrd
Length = 196
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctctgcatct 262
|||||||||||||||||||||| |||||
Sbjct: 166 tctttggattgaagggagctcttcatct 193
>48701_mtr-miR159c:pmrd
Length = 44
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctgcatctt 263
|||||||||||||||||||| ||||||
Sbjct: 1 tttggattgaagggagctctacatctt 27
>54378_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>48728_mtr-miR319b:pmrd
Length = 42
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 238 ttggattgaagggagctctgcatctt 263
||||||||||||||||||| ||||||
Sbjct: 1 ttggattgaagggagctctacatctt 26
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 146 tctttggattgaagggagctct 167
>48539_gma-miR159a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 173 tctttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 159 tctttggattgaagggagctct 180
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 235 tctttggattgaagggagctct 256
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>54777_vvi-miR159c:pmrd
Length = 190
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 181 ggataggcttatggcttgcatgccccaggagctgcat 217
|||||||||| |||||||||| | ||||||||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagctgcat 139
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctct 256
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 232 ccctctttggattgaagggagctct 256
|||| ||||||||||||||||||||
Sbjct: 144 ccctttttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 232 ccctctttggattgaagggagctct 256
|||| ||||||||||||||||||||
Sbjct: 149 ccctttttggattgaagggagctct 173
>51602_ptc-miR159a:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 232 ccctctttggattgaagggagctct 256
|||| ||||||||||||||||||||
Sbjct: 149 ccctttttggattgaagggagctct 173
>48657_hvv-miR159b:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctctg 257
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctctg 174
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctct 256
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctct 256
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 237 tttggattgaagggagctct 256
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
