miRNEST 2.0, an integrative microRNA resource :: BLAST
>48839_osa-miR164b:pmrd
Length = 109
Score = 190 bits (96), Expect = 2e-49
Identities = 102/104 (98%)
Strand = Plus / Plus
Query: 23 gtgcacggtggagaagcagggcacgtgcttcaccatccactcgcctgccggccgccggcc 82
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 1 gtgcacggtggagaagcagggcacgtgcattaccatccactcgcctgccggccgccggcc 60
Query: 83 gccattgccatggatggttcttcatgtgcccgtcttctccaccg 126
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccattgccatggatggttcttcatgtgcccgtcttctccaccg 104
>54950_zma-miR164b:pmrd
Length = 128
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 11 tagacggtggccgtgcacggtggagaagcagggcacgtgcttcaccatcca 61
||||||||||| |||| |||||||||||||||||||||| | ||||||||
Sbjct: 1 tagacggtggctgtgcgtggtggagaagcagggcacgtgcattaccatcca 51
Score = 60.0 bits (30), Expect = 5e-10
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 92 atggatggttcttcatgtgcccgtcttctccaccgcagcaccaactgtct 141
||||||||||||| |||||||| |||||||||||| ||||| ||||||||
Sbjct: 79 atggatggttcttgatgtgcccatcttctccaccg-agcacgaactgtct 127
>54410_sbi-miR164:pmrd
Length = 126
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 92 atggatggttcttcatgtgcccgtcttctcca 123
|||||||||||||||||||||| |||||||||
Sbjct: 95 atggatggttcttcatgtgcccatcttctcca 126
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgcttcaccatcca 61
|||||||||||||||||||| | ||||||||
Sbjct: 1 tggagaagcagggcacgtgcattaccatcca 31
>54956_zma-miR164h:pmrd
Length = 96
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 92 atggatggttcttcatgtgcccgtcttctccaccg 126
||||||||||||| |||||||| ||||||||||||
Sbjct: 62 atggatggttcttgatgtgcccatcttctccaccg 96
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 29 ggtggagaagcagggcacgtgcttcaccatcca 61
|||||||||||||||||||||| | ||||||||
Sbjct: 2 ggtggagaagcagggcacgtgcattaccatcca 34
>54953_zma-miR164e:pmrd
Length = 242
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 28 cggtggagaagcagggcacgtgc 50
|||||||||||||||||||||||
Sbjct: 1 cggtggagaagcagggcacgtgc 23
>54951_zma-miR164c:pmrd
Length = 270
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 28 cggtggagaagcagggcacgtgc 50
|||||||||||||||||||||||
Sbjct: 15 cggtggagaagcagggcacgtgc 37
>48842_osa-miR164e:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 23 gtgcacggtggagaagcagggcacgtg 49
||||| |||||||||||||||||||||
Sbjct: 3 gtgcagggtggagaagcagggcacgtg 29
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 93 tggatggttcttcatgtgcccgtcttctccaccg 126
|||||||| |||||||| |||||||||||||||
Sbjct: 92 tggatggtcgttcatgtgtccgtcttctccaccg 125
>48843_osa-miR164f:pmrd
Length = 210
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 ggtggagaagcagggcacgtgc 50
||||||||||||||||||||||
Sbjct: 22 ggtggagaagcagggcacgtgc 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 22 cgtgcacggtggagaagcagggcac 46
||||||||||||||||| |||||||
Sbjct: 192 cgtgcacggtggagaagaagggcac 168
>54952_zma-miR164d:pmrd
Length = 216
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 26 cacggtggagaagcagggcacgtgc 50
|||| ||||||||||||||||||||
Sbjct: 15 cacgctggagaagcagggcacgtgc 39
>54949_zma-miR164a:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 26 cacggtggagaagcagggcacgtgc 50
|||| ||||||||||||||||||||
Sbjct: 14 cacgctggagaagcagggcacgtgc 38
>54411_sbi-miR164b:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgct 51
|||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgct 41
>51622_ptc-miR164d:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 26 cacggtggagaagcagggcacgtgc 50
|||| ||||||||||||||||||||
Sbjct: 6 cacgctggagaagcagggcacgtgc 30
>48841_osa-miR164d:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgct 51
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgct 31
>48398_bra-miR164a:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 26 cacggtggagaagcagggcacgtgc 50
|||| ||||||||||||||||||||
Sbjct: 5 cacgttggagaagcagggcacgtgc 29
>48341_bna-miR164:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 26 cacggtggagaagcagggcacgtgc 50
|||| ||||||||||||||||||||
Sbjct: 2 cacgttggagaagcagggcacgtgc 26
>54955_zma-miR164g:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgc 20
>54954_zma-miR164f:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgc 20
>54788_vvi-miR164d:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>54787_vvi-miR164c:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>54785_vvi-miR164a:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>54676_tae-miR164b:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgc 20
>54414_sbi-miR164e:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgc 22
>54413_sbi-miR164d:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgc 20
>53142_ptc-miRf11320-akr:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 15 tggagaagcagggcacgtgc 34
>52901_ptc-miRf11079-akr:pmrd
Length = 171
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 15 tggagaagcagggcacgtgc 34
>51862_ptc-miRf10040-akr:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 77 tggagaagcagggcacgtgc 58
>51623_ptc-miR164e:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>51621_ptc-miR164c:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>51620_ptc-miR164b:pmrd
Length = 162
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>51619_ptc-miR164a:pmrd
Length = 85
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>51348_ppl-miR164:pmrd
Length = 159
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>50414_osa-miRf11199-akr:pmrd
Length = 146
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 13 tggagaagcagggcacgtgc 32
>48838_osa-miR164a:pmrd
Length = 156
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 17 tggagaagcagggcacgtgc 36
>48710_mtr-miR164c:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgc 25
>48709_mtr-miR164b:pmrd
Length = 144
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgc 25
>48708_mtr-miR164a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgc 25
>48547_gma-miR164:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>48473_csi-miR164:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgc 20
>48419_cav-miR164:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>47540_ath-miRf10440-akr:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 95 tggagaagcagggcacgtgc 76
>47539_ath-miRf10439-akr:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 96 tggagaagcagggcacgtgc 77
>47347_ath-miRf10247-akr:pmrd
Length = 159
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgc 25
>46942_ath-miR164c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>46941_ath-miR164b:pmrd
Length = 153
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgc 22
>46940_ath-miR164a:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggagaagcagggcacgtgc 50
||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgc 38
