miRNEST 2.0, an integrative microRNA resource :: BLAST
>40337_rco-MIR156h:mirbase
Length = 97
Score = 113 bits (57), Expect = 2e-26
Identities = 80/86 (93%), Gaps = 5/86 (5%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgcaatt--tttggattctgcatctcact 58
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 7 tgacagaagatagagagcacagatgatgatgtgcaatgacttt---ttctgcatctcact 63
Query: 59 cctttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||||
Sbjct: 64 cctttgtgctctctatgcttctgtca 89
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 109 bits (55), Expect = 3e-25
Identities = 77/84 (91%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactcc 60
|||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||
Sbjct: 12 tgacagaagatagagagcacagatgatgatatgcaat----ggactctgcatcccactcc 67
Query: 61 tttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||
Sbjct: 68 tttgtgctctctatgcttctgtca 91
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 99.6 bits (50), Expect = 3e-22
Identities = 76/84 (90%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactcc 60
|||||||||||||||||||||||||||||| |||| | || |||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatgatatgca---tggagagtctgcatctcactcc 57
Query: 61 tttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||
Sbjct: 58 tttgtgctctctatgcttctgtca 81
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 95.6 bits (48), Expect = 5e-21
Identities = 75/84 (89%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactcc 60
||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatgatgatgtgca-----tggagtttgcatctcactcc 66
Query: 61 tttgtgctctctatgcttctgtca 84
||||||||||||| |||||||||
Sbjct: 67 tttgtgctctctagacttctgtca 90
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 79.8 bits (40), Expect = 3e-16
Identities = 73/84 (86%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactcc 60
||||||||||||||||||||||||||||| ||||| ||| | ||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatgatgaaatgcaa-----ggagccagcatctcactcc 66
Query: 61 tttgtgctctctatgcttctgtca 84
|||||||||||||| |||||||||
Sbjct: 67 tttgtgctctctattcttctgtca 90
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 79.8 bits (40), Expect = 3e-16
Identities = 71/81 (87%), Gaps = 4/81 (4%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactcc 60
|||||||||||||||||||||||||||| | |||| | || |||| ||||||||||
Sbjct: 12 tgacagaagatagagagcacagatgatgttttgcagta----gactctggatctcactcc 67
Query: 61 tttgtgctctctatgcttctg 81
|||||||||||||||||||||
Sbjct: 68 tttgtgctctctatgcttctg 88
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 79.8 bits (40), Expect = 3e-16
Identities = 73/84 (86%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactcc 60
||||||||||||||||||||||||||||| |||| |||| |||||| |||||||
Sbjct: 22 tgacagaagatagagagcacagatgatgagatgca-----tggagcctgcatttcactcc 76
Query: 61 tttgtgctctctatgcttctgtca 84
|||||||||||||| |||||||||
Sbjct: 77 tttgtgctctctattcttctgtca 100
>40336_rco-MIR156g:mirbase
Length = 97
Score = 71.9 bits (36), Expect = 7e-14
Identities = 73/84 (86%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactcc 60
|||||||||||||||||||| || ||||| |||| | | ||| |||||||||||||||
Sbjct: 7 tgacagaagatagagagcactgacgatgaaatgca-tgatgggactctgcatctcactcc 65
Query: 61 tttgtgctctctatgcttctgtca 84
||||||||||||| |||||||||
Sbjct: 66 tttgtgctctctagtcttctgtca 89
>41077_gra-MIR157b:mirbase
Length = 91
Score = 67.9 bits (34), Expect = 1e-12
Identities = 72/84 (85%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactcc 60
|||||||||||||||||||||||||||| ||| | | || || ||||| ||||||
Sbjct: 6 tgacagaagatagagagcacagatgatggtgttgcctatgtgcat---gcatcccactcc 62
Query: 61 tttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||
Sbjct: 63 tttgtgctctctatgcttctgtca 86
>41076_gra-MIR157a:mirbase
Length = 101
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgcaatt 38
|||||||||||||||||||||||||||| |||||||||
Sbjct: 6 tgacagaagatagagagcacagatgatggtgtgcaatt 43
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 48 tgcatctcactcctttgtgctctctatgcttctgtca 84
||||| |||||||||||||||||||||||||||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctgtca 167
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgca 35
|||||||||||||||||||||||||||||| ||||
Sbjct: 7 tgacagaagatagagagcacagatgatgatatgca 41
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 63.9 bits (32), Expect = 2e-11
Identities = 71/84 (84%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgcaatttttggattctgcatctcactcc 60
|||||||||||||||||||||||||| || |||| |||| | |||||||| | |
Sbjct: 1 tgacagaagatagagagcacagatgacgaattgca-----tggagtttgcatctcgatac 55
Query: 61 tttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||
Sbjct: 56 tttgtgctctctatgcttctgtca 79
>40428_gma-MIR156d:mirbase
Length = 151
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgca 35
|||||||||||||||||||||||||||||| ||||
Sbjct: 22 tgacagaagatagagagcacagatgatgatatgca 56
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 48 tgcatctcactcctttgtgctctctatgcttctgtca 84
||||||| ||||||||||||||||||| |||||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctgtca 131
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 48 tgcatctcactcctttgtgctctctatgcttctgtca 84
|||||||||||||||||||||||||| |||||||||
Sbjct: 58 tgcatctcactcctttgtgctctctagtcttctgtca 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||| || |||||
Sbjct: 12 tgacagaagatagagagcactgacgatga 40
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatgatga 40
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 48 tgcatctcactcctttgtgctctctatgcttctgtca 84
|||||||||||||||||||||||||| |||||||||
Sbjct: 58 tgcatctcactcctttgtgctctctagtcttctgtca 94
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcacagatgatga 35
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 49 gcatctcactcctttgtgctctctatgcttctgtca 84
|||||||| ||||||||||||| ||| |||||||||
Sbjct: 54 gcatctcattcctttgtgctctttattcttctgtca 89
>40010_ath-MIR157a:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcacagatgatga 33
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 48 tgcatctcactcctttgtgctctctatgcttctgtca 84
||||||| |||||||||||||||||| |||||||||
Sbjct: 57 tgcatcttactcctttgtgctctctagccttctgtca 93
>39799_aly-MIR157b:mirbase
Length = 97
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 48 tgcatctcactcctttgtgctctctatgcttctgtca 84
||||||| |||||||||||||||||| ||||||||||
Sbjct: 57 tgcatcttactcctttgtgctctctaagcttctgtca 93
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatga 26
||||||||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcacagatga 30
>40429_gma-MIR156e:mirbase
Length = 124
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 49 gcatctcactcctttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||| |||||||||
Sbjct: 69 gcatctcactcctttgtgctctctagtcttctgtca 104
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||| ||||||||
Sbjct: 22 tgacagaagatagagagcactgatgatga 50
>40011_ath-MIR157b:mirbase
Length = 132
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgat 27
|||||||||||||||||||||||||||
Sbjct: 20 tgacagaagatagagagcacagatgat 46
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 48 tgcatctcactcctttgtgctctctatgcttctgtca 84
||||||| |||||||||||||||||| |||||||||
Sbjct: 72 tgcatcttactcctttgtgctctctagccttctgtca 108
>39798_aly-MIR157a:mirbase
Length = 123
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgat 27
|||||||||||||||||||||||||||
Sbjct: 17 tgacagaagatagagagcacagatgat 43
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 48 tgcatctcactcctttgtgctctctatgcttctgtca 84
||||||| |||||||||||||||||| |||||||||
Sbjct: 69 tgcatcttactcctttgtgctctctagccttctgtca 105
>41525_sly-MIR156a:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 tttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||
Sbjct: 76 tttgtgctctctatgcttctgtca 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgat 30
|||||||||||||||||||| ||||||||
Sbjct: 2 tgacagaagatagagagcactaatgatgat 31
>40013_ath-MIR157d:mirbase
Length = 221
Score = 48.1 bits (24), Expect = 1e-06
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 46 tctgcatctc-actcctttgtgctctctatgcttctgtca 84
|||||||||| | |||| ||||||||||||||||||||||
Sbjct: 154 tctgcatctctattcctatgtgctctctatgcttctgtca 193
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43
>39801_aly-MIR157d:mirbase
Length = 256
Score = 48.1 bits (24), Expect = 1e-06
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 46 tctgcatctc-actcctttgtgctctctatgcttctgtca 84
|||||||||| | |||| ||||||||||||||||||||||
Sbjct: 172 tctgcatctctattcctatgtgctctctatgcttctgtca 211
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 38 tgacagaagatagagagcac 57
>40431_gma-MIR156g:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgat 27
|||||||||||||||||||||| ||||
Sbjct: 25 tgacagaagatagagagcacaggtgat 51
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 106 tgacagaagatagagagcaca 86
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgca 35
||||||||||||||||||||| | |||||| ||||
Sbjct: 24 tgacagaagatagagagcacaaaagatgatatgca 58
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 tcctttgtgctctctatgcttctgtca 84
|||||||||||||||| ||||||||||
Sbjct: 86 tcctttgtgctctctaagcttctgtca 112
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatgtgca 35
||||||||||||||||||||| | |||||| ||||
Sbjct: 24 tgacagaagatagagagcacaaaagatgatatgca 58
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 tcctttgtgctctctatgcttctgtca 84
|||||||||||||||| ||||||||||
Sbjct: 86 tcctttgtgctctctaagcttctgtca 112
>40012_ath-MIR157c:mirbase
Length = 217
Score = 46.1 bits (23), Expect = 4e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 47 ctgcatctc-actcctttgtgctctctatgcttctgtca 84
||||||||| |||| |||||||||||||| |||||||||
Sbjct: 150 ctgcatctctactcttttgtgctctctatacttctgtca 188
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 25 tgacagaagatagagagcac 44
>39800_aly-MIR157c:mirbase
Length = 293
Score = 46.1 bits (23), Expect = 4e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 47 ctgcatctc-actcctttgtgctctctatgcttctgtca 84
||||||||| |||| |||||||||||||| |||||||||
Sbjct: 201 ctgcatctctactcttttgtgctctctatacttctgtca 239
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 56 tgacagaagatagagagcac 75
>39727_smo-MIR156b:mirbase
Length = 112
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacaga 23
|||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacaga 34
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcaca 42
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>40427_gma-MIR156c:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 147 tgacagaagatagagagcaca 167
>40335_rco-MIR156f:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>40304_bol-MIR157a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 56 actcctttgtgctctctatgcttctgtca 84
|||| |||||||||||||| |||||||||
Sbjct: 73 actcttttgtgctctctatacttctgtca 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>40260_bna-MIR156c:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 56 actcctttgtgctctctatgcttctgtca 84
|||| |||||||||||||| |||||||||
Sbjct: 109 actcttttgtgctctctatacttctgtca 137
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 19 tgacagaagatagagagcac 38
>39416_pta-MIR156b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>39415_pta-MIR156a:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>41527_sly-MIR156c:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>40310_bra-MIR157a:mirbase
Length = 149
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 15 tgacagaagatagagagcac 34
>40259_bna-MIR156b:mirbase
Length = 208
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 26 tgacagaagatagagagcac 45
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 58 tcctttgtgctctctatgcttctgtca 84
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Sbjct: 89 tcctttgtgctctctagacttctgtca 115