miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41118_tcc-MIR171c:mirbase
          Length = 123

 Score =  157 bits (79), Expect = 2e-39
 Identities = 88/91 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaata 60
           ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||
Sbjct: 16  agcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgtaaaata 75

                                          
Query: 61  cgatctcagattgagccgcgccaatatcact 91
           |||||||||||||||||||||||||||||||
Sbjct: 76  cgatctcagattgagccgcgccaatatcact 106




>40699_mtr-MIR171e:mirbase
          Length = 93

 Score =  119 bits (60), Expect = 4e-28
 Identities = 84/91 (92%), Gaps = 2/91 (2%)
 Strand = Plus / Plus

                                                                      
Query: 1  agcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaata 60
          ||||||||||||||||||||||||||||||||||||||  ||  ||  ||| ||||||||
Sbjct: 3  agcgatgttggtgaggttcaatccgaagacggatttac--atgtatagagttgtaaaata 60

                                         
Query: 61 cgatctcagattgagccgcgccaatatcact 91
          |||||||||||||||||||||||||||||||
Sbjct: 61 cgatctcagattgagccgcgccaatatcact 91




>41383_ptc-MIR171c:mirbase
          Length = 104

 Score =  101 bits (51), Expect = 8e-23
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                      
Query: 1  agcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaata 60
          ||||||||||||||||||||||||||||||||||||||   |  |   | | ||||||||
Sbjct: 8  agcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaata 67

                                         
Query: 61 cgatctcagattgagccgcgccaatatcact 91
          |||||||||||||||||||||||||||||||
Sbjct: 68 cgatctcagattgagccgcgccaatatcact 98




>40365_rco-MIR171g:mirbase
          Length = 89

 Score = 99.6 bits (50), Expect = 3e-22
 Identities = 81/91 (89%), Gaps = 4/91 (4%)
 Strand = Plus / Plus

                                                                      
Query: 1  agcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaata 60
          ||||||||||||||||||||||||||||||||||||||      |||| || |||||  |
Sbjct: 1  agcgatgttggtgaggttcaatccgaagacggatttac----acattctgttgtaaagga 56

                                         
Query: 61 cgatctcagattgagccgcgccaatatcact 91
          |||||||||||||||||||||||||||||||
Sbjct: 57 cgatctcagattgagccgcgccaatatcact 87




>41626_vvi-MIR171e:mirbase
          Length = 103

 Score = 95.6 bits (48), Expect = 5e-21
 Identities = 80/91 (87%), Gaps = 6/91 (6%)
 Strand = Plus / Plus

                                                                      
Query: 1  agcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaata 60
          |||||||||||||||||||||||||||||||||||||||||       || ||||||  |
Sbjct: 9  agcgatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaa 62

                                         
Query: 61 cgatctcagattgagccgcgccaatatcact 91
          ||||||| |||||||||||||||||||||||
Sbjct: 63 cgatctctgattgagccgcgccaatatcact 93




>41541_sly-MIR171d:mirbase
          Length = 112

 Score = 81.8 bits (41), Expect = 8e-17
 Identities = 80/91 (87%), Gaps = 4/91 (4%)
 Strand = Plus / Plus

                                                                      
Query: 1  agcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaata 60
          ||||||||||||||||||||||||||||||| ||||| |   | |||   |||||||  |
Sbjct: 9  agcgatgttggtgaggttcaatccgaagacgaatttatg--cttatt--ttcgtaaagaa 64

                                         
Query: 61 cgatctcagattgagccgcgccaatatcact 91
          |||||||||||||||||||||||||||||||
Sbjct: 65 cgatctcagattgagccgcgccaatatcact 95




>41384_ptc-MIR171d:mirbase
          Length = 100

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 79/91 (86%), Gaps = 4/91 (4%)
 Strand = Plus / Plus

                                                                      
Query: 1  agcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaata 60
          |||||||||||||||||||||||||||||| |||||||     || | |   ||||||| 
Sbjct: 8  agcgatgttggtgaggttcaatccgaagacagatttacac---gagtgaaa-gtaaaatc 63

                                         
Query: 61 cgatctcagattgagccgcgccaatatcact 91
          |||||||||||||||||||||||||||||||
Sbjct: 64 cgatctcagattgagccgcgccaatatcact 94




>41627_vvi-MIR171f:mirbase
          Length = 103

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 62 gatctcagattgagccgcgccaatatcact 91
          ||||||||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatatcact 93




>41117_tcc-MIR171b:mirbase
          Length = 120

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 66  tcagattgagccgcgccaatatcact 91
           ||||||||||||||||||||||||||
Sbjct: 78  tcagattgagccgcgccaatatcact 103



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 2  gcgatgttggtgaggttcaatccgaaga 29
          |||||||||||||||||||||| |||||
Sbjct: 19 gcgatgttggtgaggttcaatctgaaga 46




>39479_ppt-MIR171b:mirbase
          Length = 92

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 65 ctcagattgagccgcgccaatatcac 90
          ||||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcac 86




>39478_ppt-MIR171a:mirbase
          Length = 91

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 66 tcagattgagccgcgccaatatcac 90
          |||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatcac 85




>42555_sbi-MIR171j:mirbase
          Length = 108

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 69  gattgagccgcgccaatatcact 91
           |||||||||||||||||||||||
Sbjct: 84  gattgagccgcgccaatatcact 106




>39739_smo-MIR171d:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 64 tctcagattgagccgcgccaatatcac 90
          ||||| |||||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatcac 91




>41981_osa-MIR171a:mirbase
          Length = 96

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  agcgatgttggtgaggttcaatccga 26
          |||||| |||||||||||||||||||
Sbjct: 7  agcgatattggtgaggttcaatccga 32



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 gattgagccgcgccaatatc 88
          ||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87




>41540_sly-MIR171c:mirbase
          Length = 121

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 69  gattgagccgcgccaatatcac 90
           ||||||||||||||||||||||
Sbjct: 79  gattgagccgcgccaatatcac 100




>41231_csi-MIR171a:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 69 gattgagccgcgccaatatcac 90
          ||||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatcac 89




>41211_ccl-MIR171:mirbase
          Length = 321

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 69  gattgagccgcgccaatatcac 90
           ||||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatcac 144




>42774_zma-MIR171n:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 gattgagccgcgccaatatc 88
          ||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77




>42761_zma-MIR171a:mirbase
          Length = 99

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 gattgagccgcgccaatatc 88
          ||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99




>42552_sbi-MIR171g:mirbase
          Length = 77

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 gattgagccgcgccaatatc 88
          ||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77




>41764_bdi-MIR171a:mirbase
          Length = 120

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 gattgagccgcgccaatatc 88
          ||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70




>41391_ptc-MIR171k:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 gattgagccgcgccaatatc 88
          ||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78




>41116_tcc-MIR171a:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 gattgagccgcgccaatatc 88
          ||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99




>40322_bra-MIR171e:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gattgagccgcgccaatatc 88
           ||||||||||||||||||||
Sbjct: 85  gattgagccgcgccaatatc 104




>40291_bna-MIR171g:mirbase
          Length = 80

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 gattgagccgcgccaatatc 88
          ||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78




>40290_bna-MIR171f:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gattgagccgcgccaatatc 88
           ||||||||||||||||||||
Sbjct: 85  gattgagccgcgccaatatc 104




>40060_ath-MIR171a:mirbase
          Length = 123

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gattgagccgcgccaatatc 88
           ||||||||||||||||||||
Sbjct: 89  gattgagccgcgccaatatc 108




>39849_aly-MIR171a:mirbase
          Length = 198

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gattgagccgcgccaatatc 88
           ||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150




>39736_smo-MIR171a:mirbase
          Length = 135

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 68  agattgagccgcgccaatatcact 91
           ||||||||||| ||||||||||||
Sbjct: 102 agattgagccgtgccaatatcact 125