miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O81316|SCL6_ARATH Scarecrow-like protein 6 OS=Arabidopsis
thaliana GN=SCL6 PE=1 SV=1
Length = 558
Score = 58.9 bits (141), Expect = 9e-09
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = -2
Query: 215 ILARLNQQLPPSSLGLKPILRSAFIFKDVLTSIATGSRLNPNPLSNPWDVVFKLSSYKAF 36
ILARLNQQL S +G KP+ R+AF FK+ L ++ N + NP+ ++FK+++YK+F
Sbjct: 226 ILARLNQQLS-SPVG-KPLERAAFYFKEALNNLLH----NVSQTLNPYSLIFKIAAYKSF 279
Query: 35 SEVSPLIHFTD 3
SE+SP++ F +
Sbjct: 280 SEISPVLQFAN 290
>sp|O23210|SCL15_ARATH Scarecrow-like protein 15 OS=Arabidopsis
thaliana GN=SCL15 PE=2 SV=3
Length = 486
Score = 50.1 bits (118), Expect = 4e-06
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = -2
Query: 215 ILARLNQQLPPSSLGLKPILRSAFIFKDVLTSIATGSRLNPNPLSNPWDVVFKLSSYKAF 36
+L+RLNQ+L S +P+ R+AF FK+ L S TGS NP LS+ ++V ++ + K +
Sbjct: 144 VLSRLNQRL--RSPAGRPLQRAAFYFKEALGSFLTGSNRNPIRLSSWSEIVQRIRAIKEY 201
Query: 35 SEVSPL---IHFT 6
S +SP+ HFT
Sbjct: 202 SGISPIPLFSHFT 214
>sp|Q9M000|SCL22_ARATH Scarecrow-like protein 22 OS=Arabidopsis
thaliana GN=SCL22 PE=2 SV=1
Length = 623
Score = 47.8 bits (112), Expect = 2e-05
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Frame = -2
Query: 215 ILARLNQQLPPSSLGLK-----PILRSAFIFKDVLTSIATGSRLNPNPLSNPWDVVFKLS 51
ILARLN L ++ P R+A + L S+ S L+P LS P +++F+++
Sbjct: 269 ILARLNHNLNNNNDDTNNNPKPPFHRAASYITEALHSLLQDSSLSPPSLSPPQNLIFRIA 328
Query: 50 SYKAFSEVSPLIHFTD 3
+Y+AFSE SP + F +
Sbjct: 329 AYRAFSETSPFLQFVN 344
>sp|Q7XJM8|SCL27_ARATH Scarecrow-like protein 27 OS=Arabidopsis
thaliana GN=SCL27 PE=2 SV=1
Length = 640
Score = 43.1 bits (100), Expect = 5e-04
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = -2
Query: 215 ILARLNQQLPPSSLGLKPILRSAFIFKDVLTSIATGSRLNPNPLSNPWDVVFKLSSYKAF 36
ILARLN L SS P R+A + L S+ + PL P +++ ++++Y++F
Sbjct: 296 ILARLNHHLNTSSNHKSPFQRAASHIAEALLSLIHNE--SSPPLITPENLILRIAAYRSF 353
Query: 35 SEVSPLIHFTD 3
SE SP + F +
Sbjct: 354 SETSPFLQFVN 364
