miRNEST 2.0, an integrative microRNA resource :: BLAST
>41242_csi-MIR396b:mirbase
Length = 134
Score = 56.0 bits (28), Expect = 8e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 3 tatggtcctcttcgtcttattccacagctttcttgaactgcatc 46
|||| ||||||| || || |||||||||||||||||||||||||
Sbjct: 1 tatgatcctctttgtatttttccacagctttcttgaactgcatc 44
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 84 gcggttcaataaagctgtgggaagatac 111
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcatctg 48
|||||||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgcatctg 59
>40646_lja-MIR396:mirbase
Length = 108
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 7 gtcctcttcgtcttattccacagctttcttgaactgcat 45
|||||||| || || ||||||||||||||||||||||||
Sbjct: 1 gtcctctttgtattcttccacagctttcttgaactgcat 39
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgata 134
|||||||||||||||||||||| ||||
Sbjct: 73 gcggttcaataaagctgtgggaagata 99
>42814_zma-MIR396h:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 22 ttccacagctttcttgaactgcatct 47
||||||||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaactgcatct 73
>42808_zma-MIR396b:mirbase
Length = 136
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcatct 47
||||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatct 46
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcatct 47
||||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatct 46
>42472_ssp-MIR396:mirbase
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcatct 47
||||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatct 26
>42461_sof-MIR396:mirbase
Length = 134
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcatct 47
||||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatct 46
>42027_osa-MIR396b:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcatct 47
||||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcatct 36
>42813_zma-MIR396g:mirbase
Length = 114
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 22 ttccacagctttcttgaactgcatc 46
|||||||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaactgcatc 87
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 cttcgtcttattccacagctttcttgaactgca 44
|||||| || |||||||||||||||||||||||
Sbjct: 1 cttcgtattcttccacagctttcttgaactgca 33
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 104 gcggttcaataaagctgtgggaagatac 131
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 cttcgtcttattccacagctttcttgaactgca 44
|||||| || |||||||||||||||||||||||
Sbjct: 1 cttcgtattcttccacagctttcttgaactgca 33
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 104 gcggttcaataaagctgtgggaagatac 131
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcatc 46
|||||||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaactgcatc 30
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgata 134
|||||||||||||||||||||| ||||
Sbjct: 69 gcggttcaataaagctgtgggaagata 95
>40473_gma-MIR396a:mirbase
Length = 140
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcatc 46
|||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatc 45
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatactaataggatcaac 148
|||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 100 gcggttcaataaagctgtgggaagatacagatagggtcaac 140
>42807_zma-MIR396a:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcat 45
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcat 45
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcat 45
||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcat 34
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 87 gcggttcaataaagctgtgggaagatac 114
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 103 gcggttcaataaagctgtgggaagatac 130
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgca 44
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 94 gcggttcaataaagctgtgggaagatac 121
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgca 44
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcat 45
||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtggga 129
||||||||||||||||||||||
Sbjct: 99 gcggttcaataaagctgtggga 120
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 4 atggtcctcttcgtcttattccacagctttcttgaactgc 43
|||| |||||| || || ||||||||||||||||||||||
Sbjct: 3 atggccctctttgtattcttccacagctttcttgaactgc 42
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 111 gttcaataaagctgtgggatgatac 135
||||||||||||||||||| |||||
Sbjct: 113 gttcaataaagctgtgggaagatac 137
>40085_ath-MIR396a:mirbase
Length = 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 120 gcggttcaataaagctgtgggaagatac 147
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgca 44
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>39877_aly-MIR396a:mirbase
Length = 172
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 gcggttcaataaagctgtgggatgatac 135
|||||||||||||||||||||| |||||
Sbjct: 130 gcggttcaataaagctgtgggaagatac 157
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgca 44
|||||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaactgca 46
>42026_osa-MIR396a:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgca 44
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttattccacagctttcttgaact 41
|||||||||||||||||||||||
Sbjct: 18 ttattccacagctttcttgaact 40
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgc 43
||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgc 54
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactg 42
|||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactg 31
>41241_csi-MIR396a:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactg 42
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactg 41
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactg 42
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactg 41
>40477_gma-MIR396e:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactg 42
|||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaactg 27
>42812_zma-MIR396f:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42811_zma-MIR396e:mirbase
Length = 166
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42028_osa-MIR396c:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41243_csi-MIR396c:mirbase
Length = 178
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 13 ttccacagctttcttgaact 32
>41212_ccl-MIR396:mirbase
Length = 277
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 143 ttccacagctttcttgaact 162
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40476_gma-MIR396d:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40475_gma-MIR396c:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40474_gma-MIR396b:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40379_rco-MIR396:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40296_bna-MIR396a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>40086_ath-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39878_aly-MIR396b:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>39426_pta-MIR396:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
>39379_pab-MIR396a:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
