miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 190 bits (96), Expect = 4e-48
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||
Sbjct: 160 actacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 101
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 100 taatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaa 41
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||| ||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
Score = 163 bits (82), Expect = 1e-39
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| | ||||||||||||||||||||||||| |||||||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 168 bits (85), Expect = 2e-41
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 65 atgaatctagcacatacatat-gtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagggagta 157
Score = 139 bits (70), Expect = 1e-32
Identities = 131/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| | ||||||||||||||||||||||||| |||||||||
Sbjct: 97 atgaatctaaacatatgtatgtgc-tagattcattaacatcaatatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 167 bits (84), Expect = 6e-41
Identities = 136/156 (87%), Gaps = 9/156 (5%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| | ||||||||||||||||||||||||| |||||||
Sbjct: 63 taatgaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaa 113
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||| ||||||||||||||||||||
Sbjct: 114 tgctagaatgacttacattgtgaaacggagggagta 149
Score = 155 bits (78), Expect = 2e-37
Identities = 134/155 (86%), Gaps = 9/155 (5%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||||||||||||||||| || |||||||||||||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| || ||||||||||||||||||||||||| ||||||||
Sbjct: 90 aatgaatctagaat---------gtctagattcattaacatcaatatgaatgtgggaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||||||||||||||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 165 bits (83), Expect = 3e-40
Identities = 135/155 (87%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
|||||||||| || ||| ||||||||||||||||||||| ||||||||
Sbjct: 64 aatgaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaat 111
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| |||||||||| |||||||||
Sbjct: 112 gctagaatgacttacattgtgaaaccgagggagta 146
Score = 119 bits (60), Expect = 1e-26
Identities = 129/155 (83%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| |||| |||||| |||||||||||||||||||||| || |||||||||||||||
Sbjct: 147 ctactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
|||||| |||| |||||||||||||||||||||||||| ||| ||||
Sbjct: 87 aatgaaactagac------------atagattcattaacatcaatatgaatgtggaaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||| ||||||||||| ||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 165 bits (83), Expect = 3e-40
Identities = 133/154 (86%), Gaps = 18/154 (11%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 80 atgaatctag------------------attcattaacatcaatatgaatatgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 137 bits (69), Expect = 6e-32
Identities = 131/156 (83%), Gaps = 18/156 (11%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 65 atgaatctag------------------attcattaacatcaatatgaatatgggaaatg 106
Query: 133 ctagaatgacttatattgtgaaacggagggagtatt 168
||||||||||||| ||| ||||||||||| ||||||
Sbjct: 107 ctagaatgacttacattatgaaacggaggaagtatt 142
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 134/155 (86%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||||||| |||||||||| ||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| |||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtat 159
Score = 123 bits (62), Expect = 9e-28
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||| |||| || |||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | |||||||||||||||||||||| || ||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 1e-39
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||||||||||||| || |||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||| ||||| || ||||||||||| ||||||||||||||| | |||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
Score = 129 bits (65), Expect = 1e-29
Identities = 131/157 (83%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| ||||||||||| ||| ||||||||||||||||||| |||||||||||||||
Sbjct: 160 actactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgc 101
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| | |||| ||||||||||||||| |||| ||| |||
Sbjct: 100 taatgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaa 41
Query: 131 tgctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||||| ||||||||||||||| |||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 161 bits (81), Expect = 4e-39
Identities = 133/153 (86%), Gaps = 13/153 (8%)
Strand = Plus / Plus
Query: 14 acttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaa 73
|||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaa 65
Query: 74 tgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatgc 133
| ||||||| | ||||||||||||||||||||||||||||| ||||||
Sbjct: 66 taaatctag-------------tctagattcattaacatcaatatgaatatggaaaatgc 112
Query: 134 tagaatgacttatattgtgaaacggagggagta 166
|||||||||||| ||||||||||||||||||||
Sbjct: 113 tagaatgacttacattgtgaaacggagggagta 145
Score = 125 bits (63), Expect = 2e-28
Identities = 125/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| |||||| |||||||||||||| ||| || ||||||
Sbjct: 85 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagg 161
||||||||||||| ||| |||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||||| |||||||||||| |||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||||||||| ||||||||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 127/154 (82%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||| ||||| || |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | |||||||||||| |||||||||||| || ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||||||||||||| ||||||||| || ||||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 139 bits (70), Expect = 1e-32
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| |||||||||||||||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 153 bits (77), Expect = 1e-36
Identities = 133/154 (86%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||||||||| ||||||||||||| | |||||||
Sbjct: 65 atgaatctagatatat------gtctagattcattagcatcaatatgaatgtaggaaatg 118
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||||||||||||||||||
Sbjct: 119 ctagaatgacttatattgtgaaacggagggagta 152
Score = 119 bits (60), Expect = 1e-26
Identities = 130/156 (83%), Gaps = 6/156 (3%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| ||||||||||| ||| |||||||||||||||||| | |||||||||||||
Sbjct: 154 actactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgc 95
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| | ||||||||||| ||||||||||||| |||||||
Sbjct: 94 taatgaatctagacatata------tctagattcattagcatcaatatgaatgtgggaaa 41
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||| ||||||||||||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 133/156 (85%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||||||||||||||| ||| |||||||||||| | |||| || ||||||||| ||||
Sbjct: 3 actacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgt 62
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| | |||||||||||| |||||||||||| |||||||
Sbjct: 63 taatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaa 122
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgctagaatgacttatattgtgaaacggagggagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 127/154 (82%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||| |||||||||||||||||| || |||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||||||| ||||||||| ||| ||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||||||||||||||| ||||
Sbjct: 38 ttagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 151 bits (76), Expect = 4e-36
Identities = 133/155 (85%), Gaps = 9/155 (5%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
|||||||||| |||| ||||||||||||||||||||| || |||||
Sbjct: 64 aatgaatctatgtgac---------atagtttcattaacatcaatatgaatgtgagaaat 114
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| |||||||||| |||||||||
Sbjct: 115 gctagaatgacttacattgtgaaaccgagggagta 149
Score = 119 bits (60), Expect = 1e-26
Identities = 129/155 (83%), Gaps = 9/155 (5%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| |||| |||||| |||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 150 ctactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 91
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
|||||| ||| |||||||||||||||||||||||||| ||| ||||
Sbjct: 90 aatgaaactatgtcac---------atagattcattaacatcaatatgaatgtggaaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||| ||||||||||| ||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 149 bits (75), Expect = 2e-35
Identities = 133/155 (85%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | |||||||||||| |||||||| ||||||| |||||
Sbjct: 65 atgaatctaga------------tgtagattcattaatatcaatataaatatggaaaatg 112
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| |||||||||||||||||||||
Sbjct: 113 ctagaatgacttacattgtgaaacggagggagtat 147
Score = 125 bits (63), Expect = 2e-28
Identities = 124/147 (84%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| | ||||||||||||||||||||||||| || ||||||
Sbjct: 86 atgaatctaca------------tctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 133 ctagaatgacttatattgtgaaacgga 159
||||||||||||| |||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 2e-35
Identities = 132/155 (85%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || || |||||||||||||||||||||| || | |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| |||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtat 159
Score = 139 bits (70), Expect = 1e-32
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||| || | ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||| ||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 149 bits (75), Expect = 2e-35
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||| |||||||||||||||| |||| || |||||||||||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtt 100
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||| ||| | ||||||||||||||||||||||||| ||||||||
Sbjct: 99 aatgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || || |||||||||||||||||||||| ||||||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||||||||| ||||||||||||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 2e-35
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||||||
Sbjct: 159 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 100
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| || |||||||||||||||| |||||||||| || |||
Sbjct: 99 aatgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||| ||||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagta 5
Score = 113 bits (57), Expect = 8e-25
Identities = 129/157 (82%)
Strand = Plus / Plus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 2 aactactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatg 61
Query: 70 ttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaa 129
||||||||||||| | |||||||||||||||| |||||||| || | |
Sbjct: 62 ttaatgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagca 121
Query: 130 atgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||| ||| ||||||||||| ||||
Sbjct: 122 ttgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||| |||||||||||||| | || |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||||||||||||||||||||||| ||| |||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 123 bits (62), Expect = 9e-28
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||| |||| |||||||| ||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||||||| || ||||||||||||||| ||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||| |||||| || |||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| || ||||||||||||||||| ||||||| |||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 133 bits (67), Expect = 9e-31
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||||||||||||||||| || ||||||| |||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| | |||||||||||| |||||||||||| ||| ||||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaat 123
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
| |||||||||||| ||||||||||||||||||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 145 bits (73), Expect = 2e-34
Identities = 134/158 (84%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatat----tgat 68
|||||||||||||||| |||||||||||||||||||||| |||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 69 gttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatggga 128
|||||||||||||| || ||||||||||||||||| ||||||| |||||
Sbjct: 65 gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124
Query: 129 aatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||| ||||||||||||||||||||
Sbjct: 125 aatgctagaatgacttacattgtgaaacggagggagta 162
Score = 117 bits (59), Expect = 5e-26
Identities = 132/160 (82%), Gaps = 4/160 (2%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| ||||||||||| |||||||||||||||||||||| || ||||||| ||||||
Sbjct: 164 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgt 105
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatca----atatgaatatgg 126
|||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 104 taatgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgc 45
Query: 127 gaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 145 bits (73), Expect = 2e-34
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||| || ||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||| ||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 65 atgaatgtagacatatatat--gtctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| |||||| |||||||||||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagta 156
Score = 115 bits (58), Expect = 2e-25
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||| || |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || || |||||||||||||||||||||| | | |||||
Sbjct: 96 atgaatctag--acatatatatgtctacattcattaacatcaatatgaatgtagaaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| |||||| |||||||| |||||
Sbjct: 38 ctagaatgacttacattgtggaacggaggaagtat 4
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 143 bits (72), Expect = 9e-34
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||||||||||||||||| || ||| |||||||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtt 100
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||| |||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 99 aataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
||| |||||||||| ||||||||||||||||||||
Sbjct: 39 gcttgaatgacttacattgtgaaacggagggagta 5
Score = 135 bits (68), Expect = 2e-31
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| |||||||| |||||||||||||| | ||| |||||
Sbjct: 64 aatgaatctagacatatatatctatatagatttattaacatcaatat--aaatgtgaaat 121
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||||||||||||||||||||
Sbjct: 122 gctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 132/156 (84%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtt 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||| ||| || |||||||||||||||| ||||||||||||| |||
Sbjct: 64 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaat 123
Query: 132 gctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||||| ||| |||||||||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggagtat 159
Score = 115 bits (58), Expect = 2e-25
Identities = 127/154 (82%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | || ||||||||||||| ||||| || |||| ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 143 bits (72), Expect = 9e-34
Identities = 134/157 (85%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||||||||||||| || |||||||||
Sbjct: 65 atgaatctagataggcatat--gtccagattcattaacatcaatataaacgtgggaaatg 122
Query: 133 ctagaatgacttatattgtgaaacggagggagtattt 169
||||||||||||||||||||||||||||| |||||||
Sbjct: 123 ctagaatgacttatattgtgaaacggaggaagtattt 159
Score = 131 bits (66), Expect = 4e-30
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||| |||||||||||||||||| || || ||||||||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||| | | ||||||||||||||||||||||||| |||||||||
Sbjct: 96 atgaatctggacatatgccta--tctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 143 bits (72), Expect = 9e-34
Identities = 132/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||||||||||||||||| || ||| |||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtt 61
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||| |||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 62 aataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaat 121
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
||| |||||||||| ||||||||||||||||||||
Sbjct: 122 gcttgaatgacttacattgtgaaacggagggagta 156
Score = 135 bits (68), Expect = 2e-31
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| |||||||| |||||||||||||| | ||| |||||
Sbjct: 97 aatgaatctagacatatatatctatatagatttattaacatcaatat--aaatgtgaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 141 bits (71), Expect = 4e-33
Identities = 132/155 (85%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||| |||||| ||||||| ||||||||||||||||||| |||||||||
Sbjct: 65 atgtatctaga------------tatagatacattaacatcaatatgaatgtgggaaatg 112
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| |||||| |||||||| |||||
Sbjct: 113 ctagaatgacttacattgtggaacggaggaagtat 147
Score = 125 bits (63), Expect = 2e-28
Identities = 130/155 (83%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||| || |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||| ||||| | ||||| ||||||||||||||||||| ||| |||||
Sbjct: 86 atgtatctata------------tctagatacattaacatcaatatgaatgtggaaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| |||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 141 bits (71), Expect = 4e-33
Identities = 132/155 (85%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | |||||||||||| |||||||| ||||||| |||||
Sbjct: 65 atgaatctaga------------tgtagattcattaatatcaatataaatatggaaaatg 112
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||| ||||||||| |||||||||||||||||||||
Sbjct: 113 ctataatgacttacattgtgaaacggagggagtat 147
Score = 117 bits (59), Expect = 5e-26
Identities = 123/147 (83%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||| ||||||||| |||||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| | ||||||||||||||||||||||||| || ||||||
Sbjct: 86 atgaatctaca------------tctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 133 ctagaatgacttatattgtgaaacgga 159
||||||||||||| |||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 141 bits (71), Expect = 4e-33
Identities = 131/155 (84%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| | |||||||||||||||| |||||||||| || |||
Sbjct: 64 aatgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaat 123
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||| ||||||||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggagta 158
Score = 113 bits (57), Expect = 8e-25
Identities = 129/157 (82%)
Strand = Plus / Minus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 161 aactactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatg 102
Query: 70 ttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaa 129
||||||||||||| | |||||||||||||||| |||||||| || | |
Sbjct: 101 ttaatgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagca 42
Query: 130 atgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||| ||| ||||||||||| ||||
Sbjct: 41 ttgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 141 bits (71), Expect = 4e-33
Identities = 133/156 (85%), Gaps = 6/156 (3%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtc 94
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| || |||||||||| |||||||||||||| ||||||||
Sbjct: 93 aatgaatctag------acagatgtctagattcattgacatcaatatgaatgtgggaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagtat 167
| |||||||||||| ||||||||||||||| |||||
Sbjct: 39 gatagaatgacttacattgtgaaacggaggaagtat 4
Score = 137 bits (69), Expect = 6e-32
Identities = 131/154 (85%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||| ||||| || |||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||| |||||||||||||| |||||||||
Sbjct: 65 atgaatctagacatct------gtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||| ||||||||||||||||
Sbjct: 119 ctagaatgacttacattatgaaacggagggagta 152
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 141 bits (71), Expect = 4e-33
Identities = 131/155 (84%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||| ||| ||||||||| |||||||| || ||||||||| |||||
Sbjct: 159 ctacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtt 100
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| || ||||||||||||||||||||||||| |||| |||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||| ||||||||| ||||||||||||||||||||
Sbjct: 39 gctataatgacttacattgtgaaacggagggagta 5
Score = 135 bits (68), Expect = 2e-31
Identities = 131/156 (83%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| ||||||||||| ||||||||||||| ||||||| || ||||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgt 62
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| | ||||||||||||||| ||||||||| |||||||
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaa 122
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
||||| ||||||||||||||||||||||||| ||||
Sbjct: 123 tgctaaaatgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| ||| |||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||||| |||||||||||| |||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||||||||| ||||||||||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||| ||||| || |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||||| |||||||| || ||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| ||||||||||||||| |||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagtat 159
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/158 (84%)
Strand = Plus / Plus
Query: 9 caactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
||||||||||||||||| || | | ||||||||||||| ||||| |||||||||||||||
Sbjct: 1 caactacttcctccgttccacagtataagtcattctagtattttccatattcatattgat 60
Query: 69 gttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatggga 128
| |||||||| ||| || ||||||||||| |||||||||||||||| ||
Sbjct: 61 gctaatgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgaga 120
Query: 129 aatgctagaatgacttatattgtgaaacggagggagta 166
|||| ||||||||||||||||||| |||||||||||||
Sbjct: 121 aatgttagaatgacttatattgtggaacggagggagta 158
Score = 101 bits (51), Expect = 3e-21
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| |||||||| || ||| |||||||||||| ||||| ||||||||||||||||| |
Sbjct: 159 ctactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgct 100
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
|||||||||| | || |||||||| ||||||||||||||||| ||||
Sbjct: 99 aatgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||| |||| |||||||| ||||
Sbjct: 39 actagaatgacttatactgtggaacggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||| ||||||||| || ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|| ||| ||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 117 bits (59), Expect = 5e-26
Identities = 131/159 (82%)
Strand = Plus / Minus
Query: 9 caactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||
Sbjct: 162 caactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 103
Query: 69 gttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatggga 128
|||||||||||||| || ||| ||||| || ||||||||| ||| |
Sbjct: 102 gttaatgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaa 43
Query: 129 aatgctagaatgacttatattgtgaaacggagggagtat 167
||||||| ||||||||| |||||||||||||||||||||
Sbjct: 42 aatgctataatgacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||| || ||| |||||||||||||||||||||| |||||||||||| |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| || |||||||||||||| |||||| ||| |||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 125 bits (63), Expect = 2e-28
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||||||||||||||||| || ||| |||||| ||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtt 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| | |||||||||||| |||||||||||| || ||||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaat 123
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||||| |||||||||||||
Sbjct: 124 gctagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 139 bits (70), Expect = 1e-32
Identities = 131/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||||||| ||||| |||||||||||||
Sbjct: 65 atgaatctagatagaatatata-tctagattcattaacattaatataaatatgggaaatg 123
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||||||||| ||||||||||||||||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
Score = 115 bits (58), Expect = 2e-25
Identities = 131/158 (82%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||| ||||||||||| |||||||||||||||| ||||| |||||| ||||| |||
Sbjct: 160 aactactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatg 101
Query: 70 ttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaa 129
||||||||||||| | ||||||||||| ||||||||||||| || |||
Sbjct: 100 ttaatgaatctagatatatattcta-tctagattcattaccatcaatatgaatgtgagaa 42
Query: 130 atgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||||||| |||| |||||||||| |||||
Sbjct: 41 atgctagaatgacttacattgcgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 139 bits (70), Expect = 1e-32
Identities = 131/154 (85%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| || ||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| |||| |||||||||||||||||||||| |||||||||
Sbjct: 65 atgaatctagaca----------tatatattcattaacatcaatatgaatgtgggaaatg 114
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| |||||||||||| |||||||
Sbjct: 115 ctagaatgacttacattgtgaaacggggggagta 148
Score = 117 bits (59), Expect = 5e-26
Identities = 123/147 (83%), Gaps = 10/147 (6%)
Strand = Plus / Minus
Query: 21 ccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaatct 80
|||||||| |||||||||||||||||||||| || |||||||||||||||||||||| |
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatat 81
Query: 81 agnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatgctagaatg 140
| || ||||||||||||||| ||||| ||| |||||||||||||||||
Sbjct: 80 a----------tatgtctagattcattaacattaatataaatgtgggaaatgctagaatg 31
Query: 141 acttatattgtgaaacggagggagtat 167
||||| ||||||||||||||| |||||
Sbjct: 30 acttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||| |||||||||||||||||| ||| |||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||||||||| ||||||||||||| ||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||||||||| ||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
Score = 125 bits (63), Expect = 2e-28
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||||||||||| ||||| || ||||||||||||| |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgct 100
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| | ||||||||||| |||||||||||| || |||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||||||||||||||||| ||||
Sbjct: 39 gctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 6e-32
Identities = 132/157 (84%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| | |||||||||||||||||||||||| | ||||| || |||||||||||||
Sbjct: 160 actactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatgg 101
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| | |||||||||||||| |||||||||| |||||||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaa 41
Query: 131 tgctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||||| |||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagtat 4
Score = 123 bits (62), Expect = 9e-28
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| || |||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||||||||| ||||||||||||| |||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
| |||||||||| ||| ||||||||| ||||||
Sbjct: 125 gtggaatgacttacattatgaaacggaaggagta 158
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 137 bits (69), Expect = 6e-32
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 20 tccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaatc 79
||||||||| |||||||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 80 tagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatgctagaat 139
||| || |||||||||||| ||||| |||||| | | ||||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 140 gacttatattgtgaaacggagggagtatt 168
|||||| ||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagggagtatt 160
Score = 123 bits (62), Expect = 9e-28
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||||||||| | |||||| ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||||||||||||||||| || ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||||||||| ||||||||||||| ||||||
Sbjct: 38 gtagaatgacttacattgtgaaacggaaggagta 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 135 bits (68), Expect = 2e-31
Identities = 130/154 (84%), Gaps = 19/154 (12%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat------gtta 58
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 59 atgaatct-------------tgtctagattcattaacatcaatatgaatatgggaaatg 105
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 106 ctagaatgacttacattgtgaaacggagggagta 139
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 73 atgaatctag 82
||||||||||
Sbjct: 79 atgaatctag 70
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 135 bits (68), Expect = 2e-31
Identities = 130/154 (84%), Gaps = 19/154 (12%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat------gtta 86
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 85 atgaatct-------------tgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 135 bits (68), Expect = 2e-31
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 95 gtatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaa 154
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 69 gtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaa 128
Query: 155 acggagggagta 166
||||||||||||
Sbjct: 129 acggagggagta 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggag 164
|||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 165 ta 166
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 133 bits (67), Expect = 9e-31
Identities = 131/155 (84%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||||||||||||||||| || ||||| || |||||||||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| | ||||||||||||||||||||||||||| | ||||
Sbjct: 64 aatgaatctaga------------tctagattcattaacatcaatatgaatatagtaaat 111
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||||| |||||||| ||||
Sbjct: 112 gctagaatgacttatattgtggaacggaggaagta 146
Score = 123 bits (62), Expect = 9e-28
Identities = 129/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||| || ||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||||||||||||||||| |||||||||
Sbjct: 86 atgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|| ||||||||| ||| ||||||||||||||||
Sbjct: 38 gtaaaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 133 bits (67), Expect = 9e-31
Identities = 131/155 (84%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||||||||||||||||| || ||||| || |||||||||||||||
Sbjct: 147 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 88
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| | ||||||||||||||||||||||||||| | ||||
Sbjct: 87 aatgaatctaga------------tctagattcattaacatcaatatgaatatagtaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||||| |||||||| ||||
Sbjct: 39 gctagaatgacttatattgtggaacggaggaagta 5
Score = 123 bits (62), Expect = 9e-28
Identities = 129/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||| || ||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||||||||||||||||| |||||||||
Sbjct: 65 atgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaatg 112
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|| ||||||||| ||| ||||||||||||||||
Sbjct: 113 gtaaaatgacttacattatgaaacggagggagta 146
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 131 bits (66), Expect = 4e-30
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || || |||||||||||| | ||||||| |||||||||
Sbjct: 96 atgaatctag--atatatatatgtctaaattcattaacatgagtatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
| ||||||||||||||||||||||||||| |||||
Sbjct: 38 ccagaatgacttatattgtgaaacggaggaagtat 4
Score = 91.7 bits (46), Expect = 3e-18
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||| ||||||||||| |||||| || ||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||| ||| | ||||||||||||||| | ||||||| || |||||
Sbjct: 65 atgaatttagacatatatata--tctagattcattaacatgagtatgaatgtgaaaaatg 122
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||| | |||||| || ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | |||||||||||| |||||||||||| |||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||| ||||||||||||
Sbjct: 125 ctagaatgacttacattgtgatacggagggagta 158
Score = 125 bits (63), Expect = 2e-28
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||| ||| |||||||||||||||||||||| || |||||||||||| ||
Sbjct: 159 ctactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatt 100
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| || ||||||||||||||||||||| ||| ||||||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|| | ||||||||| ||||||||||||||| ||||
Sbjct: 39 gcaaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||| ||||||||| ||| ||||||||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||| ||||||||| ||||||||||||||||||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagggagta 158
Score = 111 bits (56), Expect = 3e-24
Identities = 128/156 (82%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| ||||||||||| ||| ||||||||| ||| |||| || ||| |||||||||
Sbjct: 160 actactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatgg 101
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| | ||||||||||||| ||||||||||| |||||||
Sbjct: 100 taatgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaa 41
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||| ||||||||||||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||| |||| ||||||||||||||||| ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||||||| ||||||||| |||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||| ||||||||||||||||||||||||| ||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagta 5
Score = 127 bits (64), Expect = 6e-29
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||| ||| ||||||||| |||||||| || ||||||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtt 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| || ||||||||||| ||||||||| ||| || ||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaat 123
Query: 132 gctagaatgacttatattgtgaaacggagggagtat 167
||||||||| ||||||||||||||||||||||||||
Sbjct: 124 gctagaatggcttatattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||| |||||||| || ||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||||||||||||| ||||||||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 129 bits (65), Expect = 1e-29
Identities = 131/157 (83%)
Strand = Plus / Minus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||| ||||||||||| ||||||||||||||||||||| | || ||||||||| |||
Sbjct: 161 aactactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatg 102
Query: 70 ttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaa 129
||||||||||||| | |||||||||||||| ||||||||| ||||||
Sbjct: 101 ttaatgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaa 42
Query: 130 atgctagaatgacttatattgtgaaacggagggagta 166
|||||| ||||||||| ||||||||||||||| ||||
Sbjct: 41 atgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 131/157 (83%)
Strand = Plus / Plus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
|||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||
Sbjct: 2 aactacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatg 61
Query: 70 ttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaa 129
||||||||||||| || ||||||||||| |||| |||||||| |||| |
Sbjct: 62 ttaatgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggca 121
Query: 130 atgctagaatgacttatattgtgaaacggagggagta 166
|||||| ||||||||| ||| ||||||||||||||||
Sbjct: 122 atgctaaaatgacttacattatgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/154 (80%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||||||||||||||| ||||||| || |||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| | |||||||||||||||| ||||| ||||||| || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 129 bits (65), Expect = 1e-29
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 81 tagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacg 140
Query: 158 gagggagta 166
|||||||||
Sbjct: 141 gagggagta 149
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||| ||||||||| |||||||| |||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 73 atgaatctag 82
||||||||||
Sbjct: 89 atgaatctag 80
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 127 bits (64), Expect = 6e-29
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 95 gtatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaa 154
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 69 gtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaa 128
Query: 155 acggagggagta 166
||||||||||||
Sbjct: 129 acggagggagta 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 126/154 (81%), Gaps = 18/154 (11%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||| |||| || |||||||| ||||||||| |||||||||
Sbjct: 80 atgaatc----------------tatacat--attaacattaatatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 127 bits (64), Expect = 6e-29
Identities = 130/156 (83%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||||||||| || |||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||| || |||||||||||||| |||| |||||||||| | |||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtatt 168
|||||||||||| ||||||||||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagtatt 3
Score = 117 bits (59), Expect = 5e-26
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||| |||||| |||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| || || |||||||| |||| |||||||| ||| |||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| |||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 127 bits (64), Expect = 6e-29
Identities = 130/156 (83%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| ||||||||||||| |||||||| ||| || |||||||||| |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgct 100
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| || |||||||||||| || | ||||||| ||||||||
Sbjct: 99 aatgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||||| ||||||||||||||| |||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagtat 4
Score = 123 bits (62), Expect = 9e-28
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| || ||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||||||||| |||||||||| || || ||||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||| ||||||||| ||||||||||||||||||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||||||||||||||||||| |||||||| || ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||| |||| |||||||| ||| |||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| ||| |||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtat 4
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/154 (81%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||||||||||||||||||||||||| || |||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||| |||| ||||| || || ||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| | ||||||||||| || ||||| ||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||| |||||| |||||||| |||||||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| |||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtat 159
Score = 107 bits (54), Expect = 5e-23
Identities = 126/154 (81%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| || |||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| || |||||||||||||||| |||||||| || ||||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|| ||||||||| | ||||||||||||||||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggagta 5
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 123 bits (62), Expect = 9e-28
Identities = 128/154 (83%), Gaps = 17/154 (11%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||| || ||||||||||||||||||||||| || ||||||
Sbjct: 65 atgaatc-----------------attgattcattaacatcaatatgaatgtgagaaatg 107
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||| ||| ||||||||||||||||||||
Sbjct: 108 ctagaatgaattacattgtgaaacggagggagta 141
Score = 115 bits (58), Expect = 2e-25
Identities = 127/154 (82%), Gaps = 17/154 (11%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||| | ||||||||||||||||||||||| |||||||||
Sbjct: 81 atgaatcaat-----------------gattcattaacatcaatatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 123 bits (62), Expect = 9e-28
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 123 bits (62), Expect = 9e-28
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 67 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacg 126
Query: 158 gagggagtat 167
||||||||||
Sbjct: 127 gagggagtat 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 107 taacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||| |||||||||||| ||||| || ||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 73 atgaatctag 82
||||||||||
Sbjct: 75 atgaatctag 66
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 123 bits (62), Expect = 9e-28
Identities = 129/155 (83%), Gaps = 16/155 (10%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | || |||| ||||||||||||||||||||||||
Sbjct: 65 atgaatctag----------------atatccattgacatcaatatgaatatgggaaatg 108
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| ||||||||||||||| |||||
Sbjct: 109 ctagaatgacttacattgtgaaacggaggaagtat 143
Score = 113 bits (57), Expect = 8e-25
Identities = 127/154 (82%), Gaps = 16/154 (10%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtca 83
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||| || | |||||||||||| |||||||||||| || ||||||
Sbjct: 82 atggatatc----------------tagattcattaatatcaatatgaatgtgagaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 130/157 (82%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| ||||||||||||||||| ||||| || |||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtt 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| || |||||||||||| |||||||||||| ||||||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 123
Query: 132 gctagaatgacttatattgtgaaacggagggagtatt 168
|||||||| |||| ||||||||||||||||||||||
Sbjct: 124 actagaatgtcttacattgtgaaacggagggagtatt 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/154 (80%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| |||||||| |||| || |||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||||||||||||| || | ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatttctagtgaaaata 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 18 cctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaa 77
|||||||||||||||||||||||||||||||||| || |||||||| || |||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 78 tctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatgctaga 137
||||| |||||||||| |||| || |||||||||| ||||||||||||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 138 atgacttatattgtgaaacggagggagta 166
|||||||| ||| ||||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
Score = 113 bits (57), Expect = 8e-25
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||||||||||||||||| |||||||||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||| || |||||||| |||| || |||||||| |||||||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagt 165
||||||||||||| ||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagt 157
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 130/157 (82%)
Strand = Plus / Minus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||| |||||||||||||||||||| | |||||||||| |||||||||||| ||||
Sbjct: 161 aactactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatg 102
Query: 70 ttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaa 129
||||||||||||| || |||||||||||||||| |||||||| |||| |
Sbjct: 101 ttaatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggca 42
Query: 130 atgctagaatgacttatattgtgaaacggagggagta 166
|| |||||| |||||| ||| ||||||||||| ||||
Sbjct: 41 atactagaaagacttacattatgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 127/154 (82%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||||| |||||| ||| || |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||||||||| ||||||||||| | ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| | |||| ||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 119 bits (60), Expect = 1e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 62
Query: 71 taatgaat 78
||||||||
Sbjct: 63 taatgaat 70
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggag 160
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 161 ggagta 166
| ||||
Sbjct: 10 gaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 19 ctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||||| |||||||||||||||||| ||| |||||||||| |||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggagagagta 129
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 119 bits (60), Expect = 1e-26
Identities = 129/155 (83%), Gaps = 14/155 (9%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||
Sbjct: 145 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 86
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
|| ||||||| | | |||||| ||||||||||||||| ||||||||
Sbjct: 85 cataaatctag--------------acaaattcatgaacatcaatatgaatgtgggaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
||||||||| |||| ||||||||||||||||||||
Sbjct: 39 gctagaatggcttacattgtgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 126/154 (81%), Gaps = 14/154 (9%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| ||||||||||||| || |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||| | || |||||| || ||||||||||||||| |||||||||
Sbjct: 65 atgaattt--------------gtctagatttatgaacatcaatatgaatgtgggaaatg 110
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||| ||||
Sbjct: 111 ctagaatgacttacattgtgaaacggaggaagta 144
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 129/156 (82%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| | |||||| ||||||||||||||||||| ||||| || |||||||| | |||
Sbjct: 3 actactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgt 62
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| || |||||||||||||| | |||||||| ||| |||
Sbjct: 63 taatgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaa 122
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||| ||||||||||||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagta 158
Score = 107 bits (54), Expect = 5e-23
Identities = 126/154 (81%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||||||||| || |||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | |||||||||||||| | |||||||| |||||||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||||||||| ||| || |||||| ||||||
Sbjct: 38 ttagaatgacttacattatggaacggaaggagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 128/155 (82%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||||||||||| ||| |||| || |||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||| |||| |||||||| ||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| ||| |||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtat 4
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||||||||||||||||||||||||| || |||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 96 tatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 155
|||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||
Sbjct: 75 tatagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 156 cggagggagta 166
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||||||||||||||||| || |||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatat 64
||||| ||||||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 125 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 128/155 (82%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| || |||||||||| |||||||| || ||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||||||| ||||||||||| ||| |||||||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
| | ||||||||| ||||||||||||||||||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagggagtat 4
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| || |||||||||| | |||||| || ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||||||||||||||||||||| ||| |||||||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||| ||||||||| |||||||||||||| ||||
Sbjct: 125 ctaaaatgacttactttgtgaaacggaggaagta 158
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
|||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||
Sbjct: 131 ctacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtt 72
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 71 aatgaatctag 61
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| || ||||| ||||||| |||| ||| |||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacg 121
Query: 158 gagggagta 166
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatat 64
|||| ||||||||||| ||| |||||||||||||||||| || ||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 127 ctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatt 68
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 67 aatgaatcta 58
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||| ||||||||||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 158 gagggagta 166
|||||||||
Sbjct: 118 gagggagta 126
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 114 aatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatatt 65
||||||||||||||||| ||| ||||||||||||||||||| || ||| |||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 115 bits (58), Expect = 2e-25
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||| |||||||| |||||||||||| |||||||| |||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| || | |||||||||||||| | |||||| |||||||||
Sbjct: 96 atgaatcta--tgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||| ||||||||| ||||||||||||||| ||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 8e-19
Identities = 127/156 (81%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||||||||||||||| ||||||||||||| |||||||| || |||||| | |||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgt 62
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
||||||||| || | ||||||||||||||||| |||||||| || |||
Sbjct: 63 taatgaatcaag--acatatatatgcatagattcattaacatctatatgaatgtgaaaaa 120
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
||||| |||||||| ||| ||||||||||||||||
Sbjct: 121 tgctaaaatgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 127/154 (82%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||||||||||||||||||||||||| || || |||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||| ||| || |||||||||||||||| |||||||| | || ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||||||||||||||||||||||| | |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | || ||||||||||||| |||| || |||| ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 115 bits (58), Expect = 2e-25
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 35 aagtcattctagcatttttcatattcatattgatgttaatgaatctagnnnnnnnnnnnn 94
||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 95 gtatagattcattaacatcaatatgaatatgggaaatgctagaatgactt 144
|| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 91.7 bits (46), Expect = 3e-18
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 35 aagtcattctagcatttttcatattcatattgatgttaatgaatctagnnnnnnnnnnnn 94
||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 95 gtatagattcattaacatcaatatgaatatgggaaatgctagaatgactt 144
| ||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 115 bits (58), Expect = 2e-25
Identities = 128/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | || |||||||| ||||||||||||| | | |||||
Sbjct: 65 atgaatctaga------------tctaaattcattagcatcaatatgaatgtagaaaatg 112
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||| ||| ||||||||||||||||||||
Sbjct: 113 ctagaatgatttacattgtgaaacggagggagta 146
Score = 101 bits (51), Expect = 3e-21
Identities = 127/155 (81%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||| ||||||||||||||| | ||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||| ||| | ||||||||||| ||||||||| |||||| ||||
Sbjct: 86 atgaatttaga------------tctagattcattagcatcaatataaatatgaaaaata 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| |||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| || ||||| ||||||||||||| ||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacg 14
Query: 158 gagggagtat 167
|||| |||||
Sbjct: 13 gaggaagtat 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatatt 65
||||| ||||| |||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 131 ctactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 114 aatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||| || ||||||||||||||||||| ||| ||||| ||||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 97 atagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaac 156
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 61 atagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Query: 157 ggagggagta 166
|||||||||
Sbjct: 121 agagggagta 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||| |||||| |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 73 atgaatcta 81
|||||||||
Sbjct: 70 atgaatcta 62
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggag 164
|||||||||||||||||| ||| |||||||| |||||||||||||||||||| |||| ||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 165 ta 166
||
Sbjct: 2 ta 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||| |||||| ||| ||||||||| ||||||||| || ||||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 73 at 74
||
Sbjct: 61 at 62
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 9 caactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||| ||||||||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 1 caactactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 60
Query: 69 gttaatgaatctag 82
||||||||||||||
Sbjct: 61 gttaatgaatctag 74
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcattt 51
|||||||||||||||||||||| ||||||||||| |||||
Sbjct: 135 ctacttcctccgtttcataatggaagtcattctaacattt 96
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 124 tgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||| ||||||||||| ||| ||||||||||| ||||
Sbjct: 92 tgggaaatgttagaatgacttccattatgaaacggaggaagta 134
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 64 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 123
Query: 158 gagggagta 166
|||||||||
Sbjct: 124 gagggagta 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||||||||||| |||||||||||||||||||||| || ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||| |||||||||||||||||| || ||||||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 73 atgaatctag 82
||||||||||
Sbjct: 72 atgaatctag 63
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 113 bits (57), Expect = 8e-25
Identities = 126/154 (81%), Gaps = 20/154 (12%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||||||||||||||||| || ||||||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||| ||||||||| ||||||||||||| |||||||||
Sbjct: 78 atgaatc--------------------gattcattagcatcaatatgaatgtgggaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 100 gattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 159
||||||||| ||||||||||||| |||||||||||||||||||||| ||| |||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 160 gggagta 166
|||||||
Sbjct: 132 gggagta 138
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 158 gagggagta 166
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 141 acttatattgtgaaacggagggagtat 167
||||| |||||||||||||||||||||
Sbjct: 82 acttacattgtgaaacggagggagtat 108
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 158 gagggagta 166
|||| ||||
Sbjct: 13 gaggtagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 113 bits (57), Expect = 8e-25
Identities = 123/148 (83%), Gaps = 15/148 (10%)
Strand = Plus / Minus
Query: 19 ctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaat 78
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 137 ctccgtttcacaatgtaagtcattctagcatttt-------catattgatgttaatgaat 85
Query: 79 ctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatgctagaa 138
|||| || ||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 84 ctagatat--------gtttagattcattaacatcaatatgaatgtgggaaatgttagaa 33
Query: 139 tgacttatattgtgaaacggagggagta 166
||||||| |||||||||||||| |||||
Sbjct: 32 tgacttacattgtgaaacggagagagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 19 ctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaat 78
|||||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 79 cta 81
|||
Sbjct: 71 cta 73
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 133
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||||||||||| |||||||||||||||||||||| || ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||| |||||||||||||||||| || ||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 158 gagggagta 166
|||| ||||
Sbjct: 124 gaggaagta 132
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 108 aacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||| ||| |||||||||||||||| | || |||||||||||||||
Sbjct: 133 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 74
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 73 aatgaatcta 64
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 113 bits (57), Expect = 8e-25
Identities = 129/156 (82%), Gaps = 7/156 (4%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||| ||||||||||||||||| |||| || ||| |||||||||||
Sbjct: 152 ctacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtt 93
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
|||||| || | ||| ||||||||||||||||||||| ||||||||
Sbjct: 92 aatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||||||||||||||||||||||||
Sbjct: 39 aatagaatgacttatattgtgaaacggagggagtat 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 102 ttcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagg 161
||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 162 gagta 166
||||
Sbjct: 147 aagta 151
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaacg 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 68 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 127
Query: 158 gagggagta 166
|||||||||
Sbjct: 128 gagggagta 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||| ||||| || ||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 73 atgaatctag 82
||||||||||
Sbjct: 76 atgaatctag 67
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 59 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacg 118
Query: 158 gagggagta 166
|||| ||||
Sbjct: 119 gaggaagta 127
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 73 atgaatctag 82
||||||||||
Sbjct: 67 atgaatctag 58
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 127 gaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 120/146 (82%)
Strand = Plus / Minus
Query: 18 cctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaa 77
||||||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 78 tctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatgctaga 137
||||| || |||||||| | ||||||||||| || || ||||||||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 138 atgacttatattgtgaaacggaggga 163
|||||||| |||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
Score = 111 bits (56), Expect = 3e-24
Identities = 120/146 (82%)
Strand = Plus / Plus
Query: 18 cctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaa 77
||||||||||| |||||||||||||||||||| | ||| ||||||||||| | ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69
Query: 78 tctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatgctaga 137
||||| || |||||||||| |||||||||||||| || |||||||||||
Sbjct: 70 tctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129
Query: 138 atgacttatattgtgaaacggaggga 163
|||||||| |||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 130 ctacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 71
Query: 72 aatgaatctag 82
|||| ||||||
Sbjct: 70 aatggatctag 60
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||| ||||||||||||||||||| |||||||||||||||||||||| ||| |||||||
Sbjct: 61 tagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacg 120
Query: 158 gagggagta 166
|||| ||||
Sbjct: 121 gaggaagta 129
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 141 acttatattgtgaaacggagggagtatttt 170
||||| ||||||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggagggagtatttt 1
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 109 bits (55), Expect = 1e-23
Identities = 126/154 (81%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt-- 95
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||| | || | ||||||||||| |||||||| ||| |||||
Sbjct: 94 ----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 103 bits (52), Expect = 8e-22
Identities = 126/155 (81%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtt 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||| | ||| || ||||| |||||||||||||||||| ||||
Sbjct: 64 aatgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaat 117
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||||||||||||||| ||||
Sbjct: 118 gctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 109 bits (55), Expect = 1e-23
Identities = 128/155 (82%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||| ||||| || ||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | |||||||||||| |||||||||||| |||||||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa-a 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||| ||||| ||||| |||||||||||||||
Sbjct: 38 ctagaataacttacattgtaaaacggagggagtat 4
Score = 101 bits (51), Expect = 3e-21
Identities = 127/155 (81%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||| | ||||||||| ||||||| ||| || |||||||||||| |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||||||||||||||||||||||| ||| ||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||| |||||||||||||||||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagtat 158
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 109 bits (55), Expect = 1e-23
Identities = 128/155 (82%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||| |||||||| ||| ||| | ||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||| ||| | ||||||||||| ||||||||| ||| ||| |||||
Sbjct: 65 atgaatttagatatatc------tctagattcattagcatcaatataaatgtggaaaatg 118
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||| |||||||||||||||||||||||||||||||
Sbjct: 119 ctaaaatgacttatattgtgaaacggagggagtat 153
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||| ||||||||| ||||||||| || ||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 73 atgaatctag 82
||||||||||
Sbjct: 92 atgaatctag 83
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 130/159 (81%)
Strand = Plus / Minus
Query: 9 caactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||| |||| |||||||||||||||||||| |||||||||||| ||||| | |||
Sbjct: 162 caactactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggat 103
Query: 69 gttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatggga 128
|||| ||||||||| |||||||| ||||||| |||| |||||| ||
Sbjct: 102 gttagtgaatctagacatatatacatacttagattcactaacatctatatcaatatgaga 43
Query: 129 aatgctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||||||| ||| |||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagtat 4
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||||||||||||||||| ||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 73 atgaatcta 81
||||||||
Sbjct: 65 gtgaatcta 73
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 109 bits (55), Expect = 1e-23
Identities = 127/154 (82%), Gaps = 14/154 (9%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|| || || | |||||| |||||||||| ||||||| ||||||||
Sbjct: 65 atatatata--------------tctagatttattaacatcactatgaatgtgggaaata 110
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||| |||||| |||||||||
Sbjct: 111 ctagaatgacttacattatgaaacagagggagta 144
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||| |||||||||||||||||||||||| |||| || ||||||| ||||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 73 atgaatctag 82
|| |||||||
Sbjct: 84 ataaatctag 75
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||||||| |||||||||||| |||||| || |||||||||||||||
Sbjct: 140 ctacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtt 81
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 80 aatgaatctag 70
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |||||||
Sbjct: 71 tagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaacg 130
Query: 158 gagggagta 166
|||| ||||
Sbjct: 131 gaggaagta 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| |||||||||||||||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtt 63
Query: 72 a 72
|
Sbjct: 64 a 64
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 73 atgaat 78
||||||
Sbjct: 65 atgaat 70
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggag 160
|||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggag 11
Query: 161 ggagtat 167
| |||||
Sbjct: 10 gaagtat 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
|||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 110 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||| |||| ||| ||||||||| ||| ||||||||||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 73 tagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 158 gagggagtat 167
|||| |||||
Sbjct: 13 gaggaagtat 4
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| || |||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 108 aacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 73 atgaatctag 82
||||||||||
Sbjct: 55 atgaatctag 46
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||
Sbjct: 47 tagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacg 106
Query: 158 gagggagtattt 169
|||| |||||||
Sbjct: 107 gaggaagtattt 118
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 130 atgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||| ||||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcat 49
||||| ||||||||||| ||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 107 bits (54), Expect = 5e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 134 aactacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 75
Query: 70 tt 71
||
Sbjct: 74 tt 73
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 108 aacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||| ||||||||||||||| ||| |||||||||||| ||||| |||||||||||
Sbjct: 72 tagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 158 gagggagtat 167
||||||||||
Sbjct: 13 gagggagtat 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||| ||||||||||||| || |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt- 63
Query: 73 atgaatcta 81
|||||||||
Sbjct: 64 atgaatcta 72
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||| |||||||||||| |||||||||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 73 atgaatctag 82
||||||||||
Sbjct: 74 atgaatctag 65
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||||
Sbjct: 66 tagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaacg 125
Query: 158 gagggagta 166
|||| ||||
Sbjct: 126 gaggaagta 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatat 64
|||| |||||||||||||||||||||||||||| |||||| || ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||| ||| ||||| |||||||||||| ||| ||||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| | |||||||||||||||||||| ||| |||||||
Sbjct: 55 tagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacg 114
Query: 158 gagggagta 166
|||||||||
Sbjct: 115 gagggagta 123
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 125 actactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgt 66
Query: 71 taatgaatctag 82
||||||||||||
Sbjct: 65 taatgaatctag 54
Score = 77.8 bits (39), Expect = 5e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatatt 59
|||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatatt 51
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 120 aatatgggaaatgctagaatgacttatattgtgaaacggagggagtatt 168
||||||| |||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 51 aatatggaaaatgctagaatgacttacattgtgaaacggaggaagtatt 3
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||
Sbjct: 77 tagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaacg 136
Query: 158 gagggagta 166
|||||||||
Sbjct: 137 gagggagta 145
Score = 103 bits (52), Expect = 8e-22
Identities = 128/155 (82%), Gaps = 15/155 (9%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcat-taacatcaatatgaatatgggaaat 131
|| ||||||| |||||| || || ||||||||||||| ||||||||
Sbjct: 85 ataaatctag--------------atagatctatctatcatcaatatgaatgtgggaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||| ||||||||| ||||||||||||||| ||||
Sbjct: 39 gctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 128/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
||||||||||||||||||||||||||| | |||||||||| | || |||||||| ||||
Sbjct: 158 actacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgt 99
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| || ||||||||||||||||||||||||| || ||
Sbjct: 98 taatgaatctagacacgcatataccta--gattcattaacatcaatatgaatataggcaa 41
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
|||||||| | |||| ||| ||||||||||||||||
Sbjct: 40 tgctagaaagtcttacattatgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||
Sbjct: 68 tagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaacg 127
Query: 158 gagggagta 166
|||||||||
Sbjct: 128 gagggagta 136
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| |
Sbjct: 137 ctactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgct 78
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 77 aatgaatctag 67
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
|||||||||||||||||| ||||||||| ||||||| |||| |||||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 110 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||| ||||| ||||||| ||||| ||||||||||||||| ||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 105 bits (53), Expect = 2e-22
Identities = 129/157 (82%), Gaps = 3/157 (1%)
Strand = Plus / Minus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||| |||||||||||||||||||||||||| | ||||| || |||||||||||||
Sbjct: 158 aactactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatg 99
Query: 70 ttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaa 129
|||| |||||| | ||||||||||| |||||||||||| ||||||
Sbjct: 98 ccaatggatctagactatatcta---tctagattcattagtatcaatatgaatgtgggaa 42
Query: 130 atgctagaatgacttatattgtgaaacggagggagta 166
|| ||||||||||||||||||||||||||||| ||||
Sbjct: 41 atactagaatgacttatattgtgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/154 (81%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||| ||||||||||||| |||| || |||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||| |||| ||||||||||||| |||||||||
Sbjct: 65 atgaatctag---atagatatagtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
| |||||||||| ||| ||||||||||||||||
Sbjct: 122 gtggaatgacttacattatgaaacggagggagta 155
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 105 bits (53), Expect = 2e-22
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtat 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 112 tcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 155
||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||| ||||||||||| ||| |||||||||||||||||| || ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 11 actacttcctccgttt-cataatgtaagtcattctagcatttttcatattcatattga 67
|||||||||||||||| || ||| |||||||||||||||||| || |||||||||||
Sbjct: 118 actacttcctccgttttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 99 agattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgg 158
|||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 159 agggagta 166
||| ||||
Sbjct: 12 aggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 105 attaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggag 164
|||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 165 ta 166
||
Sbjct: 136 ta 137
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 99 agattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgg 158
|||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 159 agggagta 166
||| ||||
Sbjct: 128 aggaagta 135
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 73 atgaatct 80
||||||||
Sbjct: 75 atgaatct 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggaggg 162
|||||| ||||||||||||| || ||||||||||||||||||| || ||||||| |||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 163 agta 166
||||
Sbjct: 8 agta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| |||| |||||| ||||||||||||||||||||| ||| ||||||||||||| |
Sbjct: 4 ctactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgct 63
Query: 72 aatga 76
|||||
Sbjct: 64 aatga 68
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 99 agattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgg 158
||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 159 agggagta 166
||| ||||
Sbjct: 128 aggaagta 135
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggaggg 162
||||||| |||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 163 agta 166
||||
Sbjct: 8 agta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||| ||| |||||||||||||||||| || ||||| |||||| ||
Sbjct: 136 ctacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatt 77
Query: 72 aatgaatct 80
|||||||||
Sbjct: 76 aatgaatct 68
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||| ||||||||||| ||| |||||||||||||||||| || ||||| ||||||
Sbjct: 2 aactactccctccgtttcacaatataagtcattctagcatttcacacattcacattgata 61
Query: 70 ttaatga 76
|||||||
Sbjct: 62 ttaatga 68
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtattt 169
|||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtattt 139
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggag 164
||||| |||||||| ||| ||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 165 ta 166
||
Sbjct: 6 ta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||||||||||||| || ||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 73 at 74
||
Sbjct: 65 at 66
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||||||||||| ||| |||||||||||||||||| || ||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
|||||||||||||||||||||||||| | |||||||||| || ||||| || |||| |
Sbjct: 4 ctacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgct 63
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| |||||||||||||||||| |||||||| ||| |||
Sbjct: 64 aatgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaat 123
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
||||||| | |||| ||||||||||||||||||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 120/154 (77%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| | |||||||||| | |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| || ||||||||||| |||| || ||||| |||| ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| | |||| ||| ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtattt 169
|||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtattt 139
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggag 164
||||| |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 165 ta 166
||
Sbjct: 6 ta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||||||||||| ||| |||||||||||||||||| || ||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| || ||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 73 at 74
||
Sbjct: 65 at 66
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 101 bits (51), Expect = 3e-21
Identities = 125/154 (81%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt-- 62
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||| | || | |||||||||||||||||||| ||| ||| |
Sbjct: 63 ----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||| ||||||||||||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggagggagta 152
Score = 95.6 bits (48), Expect = 2e-19
Identities = 125/155 (80%), Gaps = 6/155 (3%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||||||||||||| |||| || |||||||||||||||
Sbjct: 153 ctactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtt 94
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||| | ||| || ||||| |||||||||||||| ||| ||||
Sbjct: 93 aatgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||||||||||||||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 100 gattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 159
||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 160 gggagta 166
|| ||||
Sbjct: 128 ggaagta 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||||
Sbjct: 135 ctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtt 76
Query: 72 aatgaatc 79
||||||||
Sbjct: 75 aatgaatc 68
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||| |||||| | ||||||||| ||||||||||||| ||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 20 tccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
||||||||| ||||||||||||| | ||||||| || ||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||| ||||
Sbjct: 73 tagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaacg 14
Query: 158 gagggagtatt 168
|||||||||||
Sbjct: 13 gagggagtatt 3
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
||||||||||||||||| |||||||| ||||||||||||| || ||||||||||||||
Sbjct: 133 ctacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||| || ||||||||||||| |||||||| |||||| ||||||||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 68 tagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacg 127
Query: 158 gagggagtatt 168
|||| ||||||
Sbjct: 128 gaggaagtatt 138
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 73 atgaatctag 82
|| |||||||
Sbjct: 76 ataaatctag 67
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 118 tgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||| |||||||| ||||||| ||||| ||||||||||||||| ||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||||||||||||||| ||||||||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtattt 43
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||| |||||||| ||||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| ||||||||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 73 tagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacg 14
Query: 158 gagggagtat 167
|||| |||||
Sbjct: 13 gaggaagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
|||| ||||||||||| ||| ||||||||| ||||||||| || |||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatg 83
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| ||||||||||||| || |||||||||||| ||||| |||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaacg 14
Query: 158 gagggagtat 167
||||||||||
Sbjct: 13 gagggagtat 4
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||| |||||||||||| | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 73 atgaatctag 82
||||||||||
Sbjct: 70 atgaatctag 61
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||||||||| | || |||||||| ||||||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacg 121
Query: 158 gagggagta 166
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||| ||| |||||||| ||| ||||||||| ||||| ||||||||||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggag 160
|||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 161 ggagta 166
| ||||
Sbjct: 109 gaagta 114
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||
Sbjct: 115 ctacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtt 56
Query: 72 aatgaat 78
|||||||
Sbjct: 55 aatgaat 49
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 117 atgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||| ||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 99.6 bits (50), Expect = 1e-20
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 110 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 159
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 114 aatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 20 tccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||||| ||| |||||||||||||||||| ||||||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatatt 65
|||||||||||||||| ||| |||||||||||||||||| || |||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 73 atgaat 78
||||||
Sbjct: 65 atgaat 70
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 96 tatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 155
|||| ||||||||||| |||||||||| || ||||||||||||||||||| |||||||||
Sbjct: 75 tatatattcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 156 cggagggagta 166
|||||| ||||
Sbjct: 15 cggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtat 131
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatat 64
|||| ||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 73 atgaatctag 82
||||||||||
Sbjct: 70 atgaatctag 61
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||| | || |||||||||||||||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacg 121
Query: 158 gagggagta 166
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||| || ||||| ||||||||||||| ||||| ||||||||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatat 64
|||| ||||||||| | ||||||||||||||||| |||| ||| ||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 102 ttcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagg 161
||||||||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 162 gagtat 167
||||||
Sbjct: 117 gagtat 122
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 114 aatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatatt 65
|||||||||||||||| ||||||||||||| |||||||| || |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||| |||||||||||||||||| || ||| ||| ||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 73 atgaa 77
|||||
Sbjct: 61 atgaa 57
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 158 gaggga 163
||||||
Sbjct: 13 gaggga 8
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 18 cctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaa 77
||||||||||| ||| |||||||||||||||||| |||||| |||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Query: 78 tcta 81
||||
Sbjct: 70 tcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||| ||||||||| |||||||||||| |||||| |||||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 107 taacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||| |||||| || |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/154 (81%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||| | |||||||||| || |||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||||||||| |||||||| || | ||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||| || | |||| ||| ||||||||||||||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 8e-19
Identities = 125/155 (80%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||| | || ||||||| ||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | |||||||||||||||| |||||||| |||| ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
|||||| | |||| ||| ||||||||||| |||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagtat 159
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 73 atgaat 78
||||||
Sbjct: 71 atgaat 66
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggag 160
|||||||||||||||||| || || |||||||||||||||||| ||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 161 ggagtat 167
| |||||
Sbjct: 126 gaagtat 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 128 aaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||| ||||||||| ||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttt 52
|||| ||||||||||| ||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttt 44
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 67 tagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 126
Query: 158 gagggagtat 167
|||| |||||
Sbjct: 127 gaggaagtat 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| || ||||||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 73 atgaatctag 82
||||||||||
Sbjct: 75 atgaatctag 66
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 114 aatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtatttt 170
||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagtatttt 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatatt 65
|||| ||||| ||||| |||||||||||||||||||||| || |||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 125/154 (81%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||| | |||||||||| || |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||||||||| |||||||| || | ||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||| || | |||| ||| ||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggagta 158
Score = 93.7 bits (47), Expect = 8e-19
Identities = 125/155 (80%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||| | || ||||||| ||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | |||||||||||||||| |||||||| |||| ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
|||||| | |||| ||| ||||||||||| |||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtat 4
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 99.6 bits (50), Expect = 1e-20
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 35 aagtcattctagcatttttcatattcatattgatgttaatgaatctagnnnnnnnnnnnn 94
||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 95 gtatagattcattaacatcaatatgaatatgggaaatgctagaatgactt 144
|| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 99.6 bits (50), Expect = 1e-20
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 35 aagtcattctagcatttttcatattcatattgatgttaatgaatctagnnnnnnnnnnnn 94
||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 95 gtatagattcattaacatcaatatgaatatgggaaatgctagaatgactt 144
| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 97.6 bits (49), Expect = 5e-20
Identities = 126/156 (80%), Gaps = 18/156 (11%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
||||||||||| |||||||||| |||||| |||||||||| |||||||||||| |||||
Sbjct: 3 actacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgt 62
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
||||||||| ||||||||||| |||| ||||||||||||| ||
Sbjct: 63 taatgaatc------------------tagattcattagcatctatatgaatatgggtaa 104
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
|||||||| | |||||||| ||||||||||||||||
Sbjct: 105 tgctagaaagtcttatattatgaaacggagggagta 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| ||||||||||| | |||||||||| |||||||||| ||||||
Sbjct: 73 tagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaaca 14
Query: 158 gagggagta 166
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||||| |||| | |||||||||| ||||||||||| |||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 73 atgaatctag 82
||||||||||
Sbjct: 80 atgaatctag 71
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 14
Query: 158 gagggagta 166
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||||||||
Sbjct: 75 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 134
Query: 158 gagggagta 166
|||| ||||
Sbjct: 135 gaggaagta 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 73 atgaatctag 82
||||||||||
Sbjct: 83 atgaatctag 74
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| ||||||||| |||||| ||||| |||||||||||||||||||||||||
Sbjct: 73 tagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaacg 14
Query: 158 gagggagta 166
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||| ||||||||||||| |||| ||||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||| ||||||||||||||||||||||||| ||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcattt 90
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 121 atatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||| ||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 83 atatgtgaaatgctacaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 9 caactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||
Sbjct: 1 caactacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgat 60
Query: 69 gttaatgaa 77
|||||||||
Sbjct: 61 gttaatgaa 69
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 102 ttcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagg 161
||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 162 gagta 166
||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| || ||||| ||| ||||||||| |||||||||||
Sbjct: 79 tagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacg 138
Query: 158 gagggagta 166
|||||||||
Sbjct: 139 gagggagta 147
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||| ||| |||| ||| ||||||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 73 atgaatctag 82
||||||||||
Sbjct: 87 atgaatctag 78
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 158 gagggagta 166
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||| ||||||||| ||| ||||| || ||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 73 atgaatcta 81
|||||||||
Sbjct: 70 atgaatcta 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtatt 168
|||||||||||||| ||| |||| | | ||||||||| ||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagtatt 3
Query: 169 tt 170
||
Sbjct: 2 tt 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||| ||||||||||| ||||||||||||| | | ||||| || ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 97.6 bits (49), Expect = 5e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 106 ttaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagt 165
|||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 166 a 166
|
Sbjct: 5 a 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 103 tcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggaggg 162
||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 163 agtat 167
|||||
Sbjct: 127 agtat 131
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 73 atga 76
||||
Sbjct: 70 atga 67
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||||||||| || |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 73 a 73
|
Sbjct: 65 a 65
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||||||||||||||||| ||||| ||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 73 atga 76
||||
Sbjct: 65 atga 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggaggg 162
|||||||||||||||||||| ||| || ||||| ||||||||| ||| |||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 163 agta 166
||||
Sbjct: 8 agta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
||||| |||| |||||| ||||||||||||||||||| || || ||||||||||||
Sbjct: 124 ctactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctaga-atgacttatattgtgaaac 156
||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||||
Sbjct: 74 tagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaaac 15
Query: 157 ggagggagta 166
||||||||||
Sbjct: 14 ggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcat-tctagcatttttcatattcatattgatgtt 71
|||| ||||||||||| |||||||||| |||| ||||| || |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 65 aatgaatctag 75
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 64 tagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacg 123
Query: 158 gagg 161
||||
Sbjct: 124 gagg 127
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 14 acttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaa 73
||||||||||||||| ||| ||||||||| ||||||||| | |||||||||||||| |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72
Query: 74 tgaatctag 82
|||||||||
Sbjct: 71 tgaatctag 63
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaac 156
|||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
||||| ||| |||||| ||||||||||||||||||||||
Sbjct: 5 tactttctctgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 107 taacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcattt 88
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 127 gaaatgctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagtat 127
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||| ||||| |||||||||||| || ||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggaggg 162
|||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 163 agta 166
||||
Sbjct: 8 agta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||| ||||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 73 atga 76
||||
Sbjct: 65 atga 68
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 107 taacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||| ||| |||||||| ||| | ||| ||||||||||||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||| | ||| ||||||||| || ||||||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| || ||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 130 atgctagaatgacttatattgtgaaacggagggagta 166
|||||||| ||||||| ||||||||||||||||||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagta 111
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcat 49
|||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 113 actactccctccgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 96 tatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 155
|||| ||||||||| |||||||||||| | |||||||||||||||||||| |||||||||
Sbjct: 56 tatatattcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaa 115
Query: 156 cggagggagta 166
|||||| ||||
Sbjct: 116 cggaggaagta 126
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||
Sbjct: 129 aactacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgata 70
Query: 70 ttaatgaat 78
|||||||||
Sbjct: 69 ttaatgaat 61
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||| ||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 96 tatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 155
||||||||||||||||||||||| | | ||| |||||||||||| ||||| |||||||||
Sbjct: 75 tatagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaa 16
Query: 156 cggagggagta 166
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||| ||||||||||||| || | | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 73 atgaatcta 81
|||||||||
Sbjct: 65 atgaatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 138 atgacttatattgtgaaacggagggagta 166
|||||||| ||||||||||||||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagta 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcat 41
|||||| ||||||||||| ||||||||||||
Sbjct: 128 actactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 125/155 (80%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||| |||||||| | || ||||||| ||||||||| | ||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtt 100
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| || ||||||||||||| || ||||| ||||| | |||
Sbjct: 99 aatgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
||||||| | |||| ||||||||||||||||||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/154 (79%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| | |||||||||| |||||| ||||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| || |||||||||||||||| | ||||||||||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||| || | |||| ||||||||||||||| ||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 96 tatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 155
|||||||| |||||||||||||| | | ||| |||||||||||||||||| |||||||||
Sbjct: 69 tatagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaa 128
Query: 156 cggagggagta 166
|||||||||||
Sbjct: 129 cggagggagta 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| ||||||||||| ||||||||||||||||||||||| || | | ||||||||||
Sbjct: 141 actactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgt 82
Query: 71 taatgaatcta 81
|||| ||||||
Sbjct: 81 taataaatcta 71
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||| ||||| ||||| ||||||||||||| |||||||||||| | | ||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 93.7 bits (47), Expect = 8e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 99 agattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgg 158
||||||||||||||| |||||||| |||| ||||||||||||||||||||| ||||||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaatgctagaatgacttatattatgaaacgg 13
Query: 159 agg 161
|||
Sbjct: 12 agg 10
Score = 91.7 bits (46), Expect = 3e-18
Identities = 123/151 (81%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 16 ttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatg 75
||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 76 aatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatgcta 135
||||| | | ||||||||||| ||| ||| |||| |||| ||| |||
Sbjct: 68 aatctgg--acatatatgtggctagattcattagtatctataagaatgtgggcaatccta 125
Query: 136 gaatgacttatattgtgaaacggagggagta 166
|||||||||||||||||||||||||||||||
Sbjct: 126 gaatgacttatattgtgaaacggagggagta 156
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 8e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 112 tcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 89.7 bits (45), Expect = 1e-17
Identities = 55/57 (96%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggagtat 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattga 67
|||||||||||||||||| ||| |||||||||||||||||| || |||||||||||
Sbjct: 116 actacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||| ||||||||||| ||| ||||||||||||||| ||| || ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagca-tttccacattcatattgat 59
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||| |||| ||||||||| || ||||||||||||||||||| |||||||||||
Sbjct: 70 tagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 129
Query: 158 gaggga 163
||||||
Sbjct: 130 gaggga 135
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 18 cctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaa 77
||||||||||| |||||||||||||||||||||| ||| ||||||||| |||| ||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaa 74
Query: 78 tctag 82
|||||
Sbjct: 73 tctag 69
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggaggga 163
|||||||||||||| || ||||||||||||||||||| |||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 18 cctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
||||||||||| |||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 106 ttaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagt 165
||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 166 at 167
||
Sbjct: 122 at 123
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 106 ttaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagt 165
||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 166 a 166
|
Sbjct: 5 a 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| ||||||||||||| |||||||| ||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 73 a 73
|
Sbjct: 65 a 65
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||| ||||||||| |||||||| ||||||| ||||||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 73 a 73
|
Sbjct: 62 a 62
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||||| |||||||||| || |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| |||||||| |||| |||||||||| |||||| ||| |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacg 14
Query: 158 gagggagta 166
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatt 50
|||| |||||||||||||||||||| | ||||||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcatt 85
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 129 aatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||| | |||| ||| |||||||||||||||||
Sbjct: 85 aatgctagaaagtcttacattatgaaacggagggagtat 123
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||||| |||||||||| || |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||| | || ||||||| | |||||||| | |||||||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||||||||| |||||||| |||| ||||
Sbjct: 96 atgaatctagacatatgtgt--gtctagattcattaacatctatatgaatgtgggcaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| |||||| ||| ||||||||||| ||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||| ||||||||||||||||||||||||||| || |||||||| |||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 73 atgaatctag 82
||||||||||
Sbjct: 72 atgaatctag 63
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| |||||||| || | ||||||||||||||||| ||| ||||| |
Sbjct: 64 tagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaatg 123
Query: 158 gagggagtat 167
|||| |||||
Sbjct: 124 gaggaagtat 133
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||| || ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggagtat 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatt 50
|||| |||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||| |||||||||| ||||||||||||||||||| || ||||||| ||||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| ||||| ||||||| ||| |||||||||||||||||||||| ||||||
Sbjct: 73 tagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaaca 14
Query: 158 gagggagtat 167
|||| |||||
Sbjct: 13 gaggaagtat 4
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 91.7 bits (46), Expect = 3e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagca-ttttcacatccatattgatgtta 63
Query: 73 atgaat 78
||||||
Sbjct: 64 atgaat 69
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggag 160
||||||||||||||||||| || || |||||||||||||||||| ||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 161 ggagta 166
| ||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 18 cctccgtttcataatgtaagtcattctagcatttt 52
||||||||||| |||||||||||||||||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcatttt 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 128 aaatgctagaatgacttatattgtgaaacggaggg 162
|||||||||||||||||| ||||||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggaggg 108
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||||||||||| ||||||||| |||||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 73 atgaatctag 82
||||||||||
Sbjct: 71 atgaatctag 62
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| |||||||||||| || ||||| |||||||||||| |||||||||||
Sbjct: 63 tagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacg 122
Query: 158 gagggagtat 167
||||||||||
Sbjct: 123 gagggagtat 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtatt 168
|||||||| || |||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggagggactatt 3
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 18 cctccgtttcataatgtaagtcattctagcatttttcatattcatat 64
||||||||||| ||| |||||||||||| ||||| ||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||| | |||||||||| | | |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || |||||||||||||||| |||||||| ||| ||
Sbjct: 65 atgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaac 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| | |||| ||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 69.9 bits (35), Expect = 1e-11
Identities = 122/155 (78%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||| | |||||| || | || |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| || |||||||||||||||| |||||||| | | ||||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
|||||| | |||| ||| ||||||||||| |||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtat 4
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 110 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
|||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 124 tgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 65 tgggaaatgctagaatgatttacattgtaaaacggagggagta 107
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||| ||||||||| | ||||||| ||||||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcattt 69
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||||||||||||| ||| ||||| |||| ||||||| || ||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacg 121
Query: 158 gagggagta 166
|||||||||
Sbjct: 122 gagggagta 130
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||||| |||| |||||| || |||||||||||||||
Sbjct: 131 ctactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtt 72
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 71 aatgaatctag 61
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
||||||||||| ||||||||| | |||||| |||||||||||||||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatat 64
|||| ||||||||||| |||| |||||| | |||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| ||||||||||||| ||| |||||| | |||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacg 149
Query: 158 gagggagta 166
|||||||||
Sbjct: 150 gagggagta 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/154 (79%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| | |||||| ||| ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || || ||||||||||||| ||||||||||||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| | |||| || |||||||||||||||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagta 5
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| ||||| || |||| |||||||||| | ||||||||||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 158 gagggagta 166
|||||||||
Sbjct: 128 gagggagta 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| ||| |||| | |||||||||| || || ||||| ||||||
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 78
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 77 aatgaatcta 68
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 142 cttatattgtgaaacggagggagtatt 168
|||||||||||||||||||| ||||||
Sbjct: 29 cttatattgtgaaacggaggaagtatt 3
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| ||||| || |||| |||||||||| | ||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| ||| |||| | |||||||||| || || ||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 63
Query: 72 aatgaatcta 81
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 142 cttatattgtgaaacggagggagtatt 168
|||||||||||||||||||| ||||||
Sbjct: 112 cttatattgtgaaacggaggaagtatt 138
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 95 gtatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaa 154
||||||||||||||||||| |||||||| |||| |||||||||| | |||||| | ||||
Sbjct: 89 gtatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaa 148
Query: 155 acggagggagtat 167
|||||||||||||
Sbjct: 149 acggagggagtat 161
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 96 tatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 155
|||||||||||||||||| |||||||| |||| |||||||||| | |||||| | |||||
Sbjct: 75 tatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 16
Query: 156 cggagggagtat 167
|||||| |||||
Sbjct: 15 cggaggaagtat 4
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 110 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtattt 169
||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagtattt 2
Query: 170 t 170
|
Sbjct: 1 t 1
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
|||| ||||||||||| ||||||||||||||||| |||| ||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
|||| |||| |||||||||||||||||||| || ||||||||| ||| |||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatatgggaaa 130
||||||||||||||||||||||
Sbjct: 86 acatcaatatgaatatgggaaa 65
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/157 (80%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||| | |||||||||| ||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | |||||||||||||||| ||||| | |||| |||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 133 ctagaatgacttatattgtgaaacggagggagtattt 169
|||||| | |||| |||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtattt 161
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| | ||||||||||| |||||||||| | |||| |||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacg 14
Query: 158 gagggagta 166
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtatttt 170
|||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtatttt 1
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
||||| ||||||||||| ||||||||| ||||||||||||| || ||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||| ||||||||||| ||||||||| ||||||||||||| || ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 87.7 bits (44), Expect = 5e-17
Identities = 99/120 (82%), Gaps = 12/120 (10%)
Strand = Plus / Plus
Query: 30 aatgtaagtcattctagcatttttcatattcatattgatgttaatgaatctagnnnnnnn 89
|||||||||||||||||||||| ||| ||||||||||||| |||||||| ||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaatata-------- 52
Query: 90 nnnnngtatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatatt 149
|| ||||||||||| ||||||||||||| || |||||||||||||||||||||||
Sbjct: 53 ----tgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgacttatatt 108
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 34 taagtcattctagcatttttcatattcatattgatgttaatgaatctag 82
|||||||||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctag 56
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 125/156 (80%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||||| | |||| | |||||||||| || |||||||| |||| |
Sbjct: 159 ctacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgct 100
Query: 72 aatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaat 131
||||||||||| |||||| |||||||||||| |||||| | |||| |||
Sbjct: 99 aatgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaat 40
Query: 132 gctagaatgacttatattgtgaaacggagggagtat 167
||||||| | |||||| | |||||||||||||||||
Sbjct: 39 gctagaaagtcttataatatgaaacggagggagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| |||| |||||||| |||| |||||||||| | |||||| | |||||||
Sbjct: 90 tagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 149
Query: 158 gagggagta 166
|||| ||||
Sbjct: 150 gaggaagta 158
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtatttt 170
|||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtatttt 1
Score = 81.8 bits (41), Expect = 3e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 111 atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||| ||||||||||| ||||||||| ||||||||||||| || ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
||||| ||||||||||| ||||||||| |||||||||||| || ||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 110 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtattt 169
||||||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagtattt 142
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
|||| ||||| ||||||||| ||||||||||||||||||| |||||| |||||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgatg 83
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttt 52
|||| ||||||||||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtatttt 44
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 128 aaatgctagaatgacttatattgtgaaacggagggagtat 167
|||| ||||||||||||| ||| |||||||||||||||||
Sbjct: 43 aaatactagaatgacttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtt 63
Query: 72 aatg 75
||||
Sbjct: 64 aatg 67
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 104 cattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggaggga 163
||||||||| ||||| ||| || ||||||||||||||||||| ||||||||||||||| |
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 164 gta 166
|||
Sbjct: 7 gta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 129 aatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||| |||||| |||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagta 101
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 20 tccgtttcataatgtaagtcattctagcatt 50
|||||| || |||||||||||||||||||||
Sbjct: 94 tccgttccacaatgtaagtcattctagcatt 64
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 95 gtatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaa 154
||||||||||||||||||| |||||||| |||| |||||||||| | |||| ||| ||||
Sbjct: 69 gtatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaa 128
Query: 155 acggagggagta 166
||||||||||||
Sbjct: 129 acggagggagta 140
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||| | |||||||||| || |||||||| |||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 73 atgaatcta 81
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/159 (79%)
Strand = Plus / Plus
Query: 9 caactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||||||||||||||| |||||||| | |||||||||| || || ||||| ||
Sbjct: 1 caactacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaat 60
Query: 69 gttaatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatggga 128
||||||||||||| || ||||||||||| |||| | |||||| ||||
Sbjct: 61 gttaatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggc 120
Query: 129 aatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||| | |||| |||||||||||||||||||||
Sbjct: 121 aatgctagaaagtcttacattgtgaaacggagggagtat 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 121/154 (78%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| | |||||||||| || |||||| | |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || ||||||||||||||| ||||| || |||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| | |||| ||||||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||||||||||| ||||||||||| | || |||||||| |||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 73 atgaatctag 82
|| |||||||
Sbjct: 77 ataaatctag 68
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||| ||||||||| |||||||| ||| ||||||||||| ||||| ||| |||||||
Sbjct: 69 tagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaacg 128
Query: 158 gagggagtat 167
||||||||||
Sbjct: 129 gagggagtat 138
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatt 50
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 3 actacttcctccgtttcataatgtaagttattctagcatt 42
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 118 tgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||| |||| ||||||||||| ||||| ||| ||||||||||| ||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||| ||||||||| ||| ||||||||| |||||||||||||||| | ||| ||||||
Sbjct: 5 tacttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||| ||| | |||||| |||||||| |||||||||||||||||||||
Sbjct: 73 tagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaacg 14
Query: 158 ga 159
||
Sbjct: 13 ga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggaggg 162
|||||||| || ||||| || ||||||||||||||||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggaggg 126
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 18 cctccgtttcataatgtaagtcattctagcatttttcatattcatat 64
||||||||||| ||| ||||||||| || ||||||||| ||||||||
Sbjct: 125 cctccgtttcacaatataagtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/154 (79%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| | || ||| ||| | || |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||| |||||||||||| ||||||||||||| |||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| | |||||||| ||||||||||||||||
Sbjct: 38 ctagaaagtcttatattatgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 123/155 (79%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||||| |||| | |||||| ||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||| |||| || |||||||||||||||| |||||||| ||| |||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 124
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||| || | |||| |||||||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/154 (79%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| | |||||||||| | ||||| ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||||||| || |||||||||||||| | | |||||| |||| ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| | |||| ||||||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/154 (79%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||| | |||||||||| || |||||| | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | |||||||||||||||| ||||| |||||| ||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| | |||| ||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/154 (79%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| | |||||| ||| || |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| || || ||||||||||||| ||||||||||||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| | |||| ||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/154 (79%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| | |||||| | | ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||| ||| || |||||||||||||||| |||||||| |||| |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| | |||| ||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 114 aatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
||||||||| |||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||||||||||||||||| || ||||||||| | ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 73 atgaatctag 82
||||||||||
Sbjct: 70 atgaatctag 61
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatat 64
|||||||||||||||| ||||||||| |||||||||||| ||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||| || ||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/154 (79%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| | || ||| ||| | || |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| | ||| |||||||||||| ||||||||||||| |||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 124
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
|||||| | |||||||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttatattatgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 5e-14
Identities = 123/155 (79%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||||| |||| | |||||| ||| ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
||||| |||| || |||||||||||||||| |||||||| ||| |||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 39
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||| || | |||| |||||||||||||||||||||
Sbjct: 38 ctaaaaagtcttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| ||||||||||||| ||| ||||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 73 at 74
||
Sbjct: 65 at 66
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 95 gtatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaa 154
||||| ||| |||||||||||||||||| ||| |||| ||| ||||||||| ||||||||
Sbjct: 76 gtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaa 17
Query: 155 acggagggagta 166
||||||| ||||
Sbjct: 16 acggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 137 aatgacttatattgtgaaacggagggagtat 167
|||| |||| |||||||||||||||||||||
Sbjct: 81 aatggcttacattgtgaaacggagggagtat 111
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 103 tcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggaggg 162
||||| |||||||||| ||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 163 agtat 167
|||||
Sbjct: 90 agtat 94
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||| | ||| |||||||||||||||||| ||| ||| |||||||||| |
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgtaa 34
Query: 73 atga 76
||||
Sbjct: 33 atga 30
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 137 aatgacttatattgtgaaacggagggagtat 167
|||||||||||||||||||||||| ||||||
Sbjct: 34 aatgacttatattgtgaaacggagagagtat 4
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| |||||||| |||| |||||||||| | |||||| | |||||||
Sbjct: 91 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacg 150
Query: 158 gagggagta 166
|||||||||
Sbjct: 151 gagggagta 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 106 ttaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagt 165
|||||||| |||||||| |||| |||||||||| | |||||| | |||||||||||||||
Sbjct: 65 ttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagt 6
Query: 166 at 167
||
Sbjct: 5 at 4
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
|||| ||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtat 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 124 tgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 107 tgggaaatgctagaatgacttacattgtgaaacggagggagtat 150
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacgg 158
|||| ||| |||||||||||||||||||||| ||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||| ||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||| ||||||||||| ||||||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcattt 111
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 21 ccgtttcataatgtaagtcattctagcattt 51
|||||||| ||||||||||||||||||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcattt 68
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 19 ctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaat 78
||||||||||||||||||| | |||||||||| | |||||| |||| |||||||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaat 72
Query: 79 ctag 82
||||
Sbjct: 71 ctag 68
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| |||| ||||||| |||||||||| | |||| ||| |||||||
Sbjct: 69 tagattcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaacg 128
Query: 158 gagggagtatt 168
||| |||||||
Sbjct: 129 gagagagtatt 139
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatt 50
|||||| ||||||||||||||||||| | ||||||||||
Sbjct: 4 ctactttctccgtttcataatgtaagactttctagcatt 42
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 124/156 (79%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| ||||||||||| |||||||| | | |||||||| ||| |||||||| |||||
Sbjct: 3 actactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgt 62
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| | |||||||||||||||| || ||||| |||| ||
Sbjct: 63 taatgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaa 122
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
|| || || | |||| ||||||||||||||||||||
Sbjct: 123 tgttaaaaagtcttacattgtgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| |||||||| || | |||||||| | | |||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacg 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 77.8 bits (39), Expect = 5e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 124 tgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 129 aatgctagaatgacttatattgtgaaacggagggagtatt 168
||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagtatt 97
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||| ||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatt 50
|||| ||||||||||| ||||||| |||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
||||| ||||||||||| ||||||||||||| ||| |||||||| ||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattga 67
|||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| || |||| ||| ||||||||| ||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 112 tcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||| || |||| ||||||||||||| ||| ||||| ||||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 77.8 bits (39), Expect = 5e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 124 tgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||| ||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 129 aatgctagaatgacttatattgtgaaacgga 159
|||||||||||||||||||||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacgga 97
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatt 50
||||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 107 aactacttcttccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggag 160
||||||||||||| |||||||| |||| |||||||||| | |||| ||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 161 ggagtat 167
|||||||
Sbjct: 10 ggagtat 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||| | |||||||||| || |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 73 atgaat 78
||||||
Sbjct: 65 atgaat 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||| |||||||| |||| |||||||||| | |||| ||| ||||||||||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatt 50
|||| |||||||||||||||||||| | ||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcatt 105
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 77.8 bits (39), Expect = 5e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatt 50
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcatt 42
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| ||||| || |||| ||||||||||||| ||| ||| ||||||
Sbjct: 64 tagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaaca 123
Query: 158 gagggagtatt 168
|||||||||||
Sbjct: 124 gagggagtatt 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||| |||||||||||||| ||||||||||||| || || ||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 73 atgaatctag 82
||||||||||
Sbjct: 72 atgaatctag 63
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 115 atatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||| ||||||| ||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 123/155 (79%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||||||| | || ||||||| || |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 73 atgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaatg 132
|| |||||| || ||||||||||| |||| |||||||| |||| ||||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||| | |||| |||||||||||||||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagtat 159
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 96 tatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 155
|||||||| |||| |||| |||||||| |||| ||||||| || | |||| ||| |||||
Sbjct: 75 tatagatttattagcatctatatgaatgtgggtaatgctataaagtcttacattatgaaa 16
Query: 156 cggagggagta 166
|||||| ||||
Sbjct: 15 cggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||| |||||||| | ||||| |||| || |||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 73 atgaatctag 82
||||||||||
Sbjct: 98 atgaatctag 89
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 77.8 bits (39), Expect = 5e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgactt 144
||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 47 tagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 77.8 bits (39), Expect = 5e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgactt 144
||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 77 tagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 35 aagtcattctagcatttttcatattcatattgatgttaatgaatctag 82
||||||||||||||||| || ||||||||||||||||||| ||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctag 48
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 35 aagtcattctagcatttttcatattcatattgatgttaatgaatctag 82
||||||||||||||||| || ||||||||||||||||||| ||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctag 76
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 116 tatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||| |||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcattt 51
||||||||||||||||| ||||||||||||||||||||||
Sbjct: 96 ctacttcctccgtttcacaatgtaagtcattctagcattt 57
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 127 gaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||| |||||||||| |||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||| |||| |||||| ||||||||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||| ||||| ||||||| ||||| |||||||||||||||| |||||||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 73 atgaatctag 82
||||||||||
Sbjct: 46 atgaatctag 37
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| |||||||| |||||| |||||||| ||||| ||| ||||||||| |
Sbjct: 38 tagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaatg 97
Query: 158 gagggagta 166
|||||||||
Sbjct: 98 gagggagta 106
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcatt 42
|||||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 137 aatgacttatattgtgaaacggagggagtattt 169
||||||||| ||||||||||||||| |||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtattt 2
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||| |||||||||||| |||||||| ||| |||||||| |||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 73 at 74
||
Sbjct: 48 at 47
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 134 tagaatgacttatattgtgaaacggagggagta 166
|||||||||||| ||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 105 attaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggag 164
||||| |||||||| ||| || |||| |||||||||||| ||||||||||||||| ||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 165 tat 167
|||
Sbjct: 107 tat 109
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattcta 45
|||| ||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||| |||| ||||||| |||||| ||||| |||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 73 atgaat 78
||||||
Sbjct: 77 atgaat 72
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggag 160
||||||||||||| ||||| ||||| | ||||||| |||| |||| ||||||||||||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 161 ggagta 166
| ||||
Sbjct: 132 gaagta 137
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||| | |||||||||| | || |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| | |||||| ||| |||||||||| | |||| |||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacg 14
Query: 158 gagggagtat 167
|||| |||||
Sbjct: 13 gaggaagtat 4
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||| ||||||||||| ||||||| |||||||||||||||||||||| |||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttttcatatttctattgatgt 47
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtatt 168
||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagtatt 106
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 128 aaatgctagaatgacttatattgtgaaacggagggagta 166
|||| ||||||||||||||||||||||||| ||||||||
Sbjct: 43 aaatactagaatgacttatattgtgaaacgaagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttca 55
|||| ||| ||||||| ||| ||||||||||||| ||||||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtatttttca 47
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||| ||||||||||||||| | |||||||||| | || |||||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 73 atgaatctag 82
||||||||||
Sbjct: 72 atgaatctag 63
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| |||||||| ||| |||||||||| | |||| ||| ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaaca 123
Query: 158 gagggagta 166
|||||||||
Sbjct: 124 gagggagta 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||||||| |||||||||||||| | |||||||||| | || |||||||| |||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgt 62
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||| |||| ||||||| |||||| ||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 73 atgaat 78
||||||
Sbjct: 65 atgaat 70
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggag 160
||||||||||||| ||||| ||||| | ||||||| |||| |||| ||||||||||||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 161 ggagta 166
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatt 50
||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcatt 99
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||| |||||||||||||||||||||||||||| ||| ||||| ||||| |||
Sbjct: 2 aactactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagata 61
Query: 70 ttaatgaatctag 82
|||||||||||||
Sbjct: 62 ttaatgaatctag 74
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||| ||| ||||| ||||||| ||| |||||||||||| ||| |||||||
Sbjct: 73 tagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaacg 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 129 aatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 124/156 (79%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||||||||||||||| |||||||| | |||||||||| ||| ||||| | |||||
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgt 62
Query: 71 taatgaatctagnnnnnnnnnnnngtatagattcattaacatcaatatgaatatgggaaa 130
|||||||||||| |||||||||||||||| ||||| || |||| ||
Sbjct: 63 taatgaatctagacac-----------tagattcattaacatctatatgtatgtgggcaa 111
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
|||||||| | |||| ||| ||||||||||||||||
Sbjct: 112 tgctagaaagtcttacattatgaaacggagggagta 147
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||| | |||||||||| || || ||||| |||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 73 atgaatctag 82
||||||||||
Sbjct: 87 atgaatctag 78
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| |||||||| |||| |||||||||| | |||||| | |||||||
Sbjct: 58 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 117
Query: 158 gagggagtat 167
|||| |||||
Sbjct: 118 gaggaagtat 127
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||||| | |||| | |||||||||| || |||||||| |||||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 73 atgaatctag 82
||||||||||
Sbjct: 66 atgaatctag 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 117 atgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||| |||| |||||||||| |||||| | ||||||||||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaaatcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||| |||||||||||||||||||||||||||| ||||| ||| |||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||| |||||||||||||||||| |||||| || |||| ||| |||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 73 atgaatctag 82
|||||||||
Sbjct: 78 gtgaatctag 69
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||| |||||||| || |||||| |||||||||||| ||| ||||||||||||||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||| ||||||| ||| |||| ||| ||||| |||||||||||| ||| | |||||
Sbjct: 70 tagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaacg 129
Query: 158 gagggagta 166
|||||||||
Sbjct: 130 gagggagta 138
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||| | |||||||||| ||| || ||||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 73 atgaatcta 81
|||||||||
Sbjct: 98 atgaatcta 90
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| ||||| || || | |||||||||| | |||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 158 gagggagta 166
|||| ||||
Sbjct: 150 gaggaagta 158
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcattt 51
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 130 actactccctccgtttcataatgtaagtcattctagcattt 90
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 124 tgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 86 tgggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||| ||||||||||| |||||||||||| ||||| ||| ||| |||| || |||
Sbjct: 5 tacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaatta 64
Query: 73 atgaatctag 82
|||||||||
Sbjct: 65 gtgaatctag 74
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||| ||| || |||| ||| || |||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcactaatttccatataaatgtgagaaatgttagaatgacttatattatgaaacg 14
Query: 158 gagggagta 166
||| ||||
Sbjct: 13 aaggaagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| | |||||| |||| |||||||||| | |||| ||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaaca 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||| |||||| |||||||| | |||||||||| || |||||| | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 73 atgaatcta 81
|||||||||
Sbjct: 65 atgaatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 129 aatgctagaatgacttatattgtgaaacggagggagta 166
||||||| || | |||| ||||||||||||||||||||
Sbjct: 123 aatgctaaaaagtcttacattgtgaaacggagggagta 160
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 18 cctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaa 77
|||||||||||||||||||| | |||||||||| | || |||||||| |||||||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 78 tctag 82
|||||
Sbjct: 43 tctag 39
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||| |||||||| |||||||| ||| |||||||||| | |||| ||| |||||||
Sbjct: 40 tagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacg 99
Query: 158 gaggga 163
||||||
Sbjct: 100 gaggga 105
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaag 37
||||||||||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaag 29
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||| ||||||||| |||||||| ||| |||||||||| | |||| |||||||||||
Sbjct: 72 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacg 131
Query: 158 gagggagta 166
|||||||||
Sbjct: 132 gagggagta 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| |||||||| | |||||||||| | || |||||||| ||||||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtt 82
Query: 72 aatgaatctag 82
||| |||||||
Sbjct: 81 aataaatctag 71
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
||||| |||||||||||| ||||||| || | |||| |||||||||||||||||||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||| ||||||||||| |||||||| | || ||||||| | ||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatgt 62
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 100 gattcattaacatcaatatgaatatgggaaatgctagaatgactt 144
||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 100 gattcattaacatcaatatgaatatgggaaatgctagaatga 141
||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 35 aagtcattctagcatttttcatattcatattgatgttaatgaatc 79
||||||||||||||||| || ||||||||||||| |||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 38 tcattctagcatttttcatattcatattgatgttaatgaatc 79
|||||||||||||| || ||||||||||||| |||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 18 cctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgttaatgaa 77
|||||||||||||||||||| | |||||||||| ||||||||||| |||||||| |||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaa 69
Query: 78 tctag 82
|||||
Sbjct: 70 tctag 74
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||| |||||||| |||||||||||| |||||||||| | |||| ||| |||||||
Sbjct: 73 tagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatgaaacg 14
Query: 158 gaggga 163
||||||
Sbjct: 13 gaggga 8
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaag 37
||||||||||||||||||||||||||
Sbjct: 109 ctacttcctccgtttcataatgtaag 84
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||| |||||||| |||| |||||||||| | |||||| | |||||||
Sbjct: 64 tagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttgaaacg 123
Query: 158 gagggagta 166
|||||||||
Sbjct: 124 gagggagta 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||||| | | |||| | |||||||||| || |||||||| |||||
Sbjct: 133 ctactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtt 74
Query: 72 aatgaatctag 82
|||||||||||
Sbjct: 73 aatgaatctag 63
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 10 aactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatg 69
||||||||||||||||||| |||||||| | |||||||||| || |||||||| ||||
Sbjct: 137 aactacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatg 78
Query: 70 ttaatgaatctag 82
||||| |||||||
Sbjct: 77 ttaataaatctag 65
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||| ||||||||| |||||||| |||| |||||||||| | |||| |||||||||||
Sbjct: 66 tagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacg 125
Query: 158 gagggagta 166
|||| ||||
Sbjct: 126 gaggaagta 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatat 64
|||| ||||||||||||| |||||| | |||||||||| |||| ||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatat 56
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 119 gaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 128 aaatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattc 60
|||||| ||||||||||| |||| |||||||||||||||||| |||||||
Sbjct: 3 actactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttt 52
|||| ||||||||||| |||||||||||||||||||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcatttt 77
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttt 52
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcatttt 69
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 125 gggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 46 gggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 128 aaatgctagaatgacttatattgtgaaacggagggagtatt 168
|||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagtatt 110
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||| ||||||||||| ||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 128 aaatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacggagggagtat 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttt 52
|||| ||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcatttt 44
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcattt 51
||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 147 ctactcccttcgtttcataatgtaagtcattctagcattt 108
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 127 gaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 107 gaaatgctagaatgacttacattatgaaacgaagggagta 146
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 95 gtatagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaa 154
||||||||||||||||||| |||||||| |||| ||| |||||| | |||||| | ||||
Sbjct: 76 gtatagattcattaacatctatatgaatgtgggcaattctagaaagtcttataatatgaa 17
Query: 155 acggagggagta 166
|| |||||||||
Sbjct: 16 acagagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 95 gtatagattcattaacatcaatatgaatatggg 127
||||||||||||||||||| |||||||| ||||
Sbjct: 89 gtatagattcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| |||| |||||||| |||| |||| ||||| | |||||| | |||||||
Sbjct: 70 tagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaacg 129
Query: 158 gagggagtatt 168
|||||||||||
Sbjct: 130 gagggagtatt 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||| | |||| | ||||| |||| || |||||||| |||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 73 atgaatctag 82
||||||||||
Sbjct: 78 atgaatctag 69
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcata 63
|||||||||||||||| ||||||||||||||||| ||||| || |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||| ||||| || | ||||| |||||||||||||||||||||||||
Sbjct: 71 tagattcattaacaattatatggatgagagaaatcctagaatgacttatattgtgaaacg 130
Query: 158 gagggagta 166
|||| ||||
Sbjct: 131 gaggaagta 139
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 116 tatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
||||||| ||| |||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagtat 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||||||||||||||| ||| ||||||||||||| |||| || || ||||| |||
Sbjct: 141 actacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgt 82
Query: 71 taatgaatctag 82
||||||||||||
Sbjct: 81 taatgaatctag 70
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 127 gaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 127 gaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 52 gaaatgctaaaatgacttatattatgaaacggatggagta 91
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcattt 51
|||||| | ||||||||||||| ||||||||| ||||||||
Sbjct: 93 actactccatccgtttcataatataagtcattttagcattt 53
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||| |||||||| |||||||| |||| |||||||||| | |||||| | |||||||
Sbjct: 73 tagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 158 gagggagtat 167
|||| |||||
Sbjct: 13 gaggaagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||||| | |||| | |||||||||| || |||||||| |||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 73 atgaatctag 82
| ||||||||
Sbjct: 65 acgaatctag 74
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggag 160
|||||||| |||| ||||||||||||| |||||||||| | |||||| | ||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggag 108
Query: 161 ggagta 166
| ||||
Sbjct: 109 gaagta 114
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||||||||||||||||| | |||| | |||||||||| ||||||||||| ||||
Sbjct: 116 actacttcctccgtttcatattataagactttctagcattacccatattcatatagatga 57
Query: 71 taatgaat 78
||||||||
Sbjct: 56 taatgaat 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 117 atgaatatgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
|||||| |||| |||| ||||| | |||||| | |||||||||||||||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataatatgaaacggagggagtat 4
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 117 atgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||| || ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||| ||||||||||||| |||||||||||| |||||||| |||||| ||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcat 62
|||| ||||||||||| ||||||| |||||||||||||| ||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||| |||| || |||| |||||||| |||||||| || ||||||||||||| ||
Sbjct: 114 tacttccctcgttccacaatgcaagtcattttagcatttcccacattcatattgatgcta 55
Query: 73 atgaat 78
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||| |||||||||||||| | |||||||||| | || |||||||| |||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 73 atgaatctag 82
|| |||||||
Sbjct: 65 ataaatctag 74
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||| ||||||||| |||||||| ||| |||||||||| | |||| ||| ||||| |
Sbjct: 73 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaatg 14
Query: 158 gagggagtat 167
||||||||||
Sbjct: 13 gagggagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatt 50
|||| |||||||||||||||||||| | ||||||||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcatt 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 129 aatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||| | |||| ||| |||||||||||||||||
Sbjct: 87 aatgctagaaagtcttacattatgaaacggagggagtat 125
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| |||||||| |||| |||||||||| | |||||| | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 158 gagggagta 166
|||| ||||
Sbjct: 124 gaggaagta 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||| |||||||| | |||| | |||||||||| || |||||||| |||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 73 atgaatcta 81
|||||||||
Sbjct: 72 atgaatcta 64
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 118 tgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||| |||| |||||||||| | |||||| | ||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||| ||| |||||||| |||| |||||||||| | |||| ||| |||||||
Sbjct: 90 tagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 149
Query: 158 gagggagta 166
|||||||||
Sbjct: 150 gagggagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||| | |||||||||| || |||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 73 atgaatctag 82
||||||||||
Sbjct: 98 atgaatctag 89
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||| | |||||||| |||| |||||||||| | |||||| | |||||||
Sbjct: 73 tagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| ||||||||||||| | |||| | |||||||||| || |||||||| | ||
Sbjct: 3 actactccctccgtttcatattataagactttctagcattgcccacattcatatatacgt 62
Query: 71 taatgaatctag 82
||||||||||||
Sbjct: 63 taatgaatctag 74
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 114 aatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||||||| |||||||| ||| ||||||||| ||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatatt 65
|||||||||||||||| ||||||||||||| ||| |||| || |||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 137 aatgacttatattgtgaaacggagggagta 166
||||||||| ||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcatt 42
|||| ||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagca 48
||||||||||||||||| |||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagca 40
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 131 tgctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||| ||||||||||||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctag 46
|||| ||||||| ||||||| |||||||||||||
Sbjct: 85 tactacctccgtctcataatataagtcattctag 52
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 133 ctagaatgacttatattgtgaaacggagggagta 166
||||||||||||||||| ||| ||||||| ||||
Sbjct: 52 ctagaatgacttatattatgagacggaggtagta 85
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| |||||||| |||| |||||||||| | |||||| | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 158 gagggagta 166
|||| ||||
Sbjct: 124 gaggaagta 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||| |||||||| | |||| | |||||||||| || |||||||| |||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 73 atgaatcta 81
|||||||||
Sbjct: 72 atgaatcta 64
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 118 tgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||| |||| |||||||||| | |||||| | ||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||| | |||||||| |||| |||||||||| | |||||| | |||||||
Sbjct: 60 tagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 119
Query: 158 gagggagta 166
|||||||||
Sbjct: 120 gagggagta 128
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 11 actacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgt 70
|||||| ||||||||||||| | |||| | |||||||||| || |||||||| | ||
Sbjct: 130 actactccctccgtttcatattataagactttctagcattgcccacattcatatatacgt 71
Query: 71 taatgaatctag 82
||||||||||||
Sbjct: 70 taatgaatctag 59
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| |||||||||||||||||||| | |||||||| | || | |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgtta 64
Query: 73 atgaatcta 81
||| |||||
Sbjct: 65 atggatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatt 50
||||||||||| |||||||| |||| | ||||||||||
Sbjct: 158 tacttcctccgcttcataatataagactttctagcatt 121
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||||||||||||||| ||| | |||||||||| || |||||| | |||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 73 atgaatcta 81
|||||||||
Sbjct: 65 atgaatcta 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| | |||||| |||| |||||||||| | ||| ||| |||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacg 14
Query: 158 gagggagta 166
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||| ||||||||| | ||| || |||| |||||||||| | |||| |||||||||||
Sbjct: 90 tagatttattaacatctaaatgtatgtgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 158 gagggagta 166
|||||||||
Sbjct: 150 gagggagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatt 50
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcatt 121
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| |||| || |||| | ||||| || | ||||||||||||||||
Sbjct: 86 tagattcattaacatctttatgtatgtgggtagtgctaaaaagtcttatattgtgaaacg 145
Query: 158 gagggagta 166
|||||||||
Sbjct: 146 gagggagta 154
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| | |||||| |||| || |||| || | |||| |||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaacg 14
Query: 158 gagggagtatt 168
|||| ||||||
Sbjct: 13 gaggaagtatt 3
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||||||||||||||| |||||||| | || |||| || || |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 128 aaatgctagaatgacttatattgtgaaacggag 160
|||||||||||||||||||||||||||||||||
Sbjct: 51 aaatgctagaatgacttatattgtgaaacggag 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcat 49
|||||||||||||||| | ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacagtgtaagtcattctagcat 41
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttt 52
||||| |||||||||| ||| |||||||||||||||||||
Sbjct: 89 tacttactccgtttcacaatataagtcattctagcatttt 50
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 130 atgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||||||| | ||||||||||||| |||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 124 tgggaaatgctagaatgacttatattgtgaaacggagggagtat 167
|||||||||||||||||||||| |||||| |||||||| |||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtggaacggaggaagtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
||||||||||||| || ||||||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattt 43
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 132 gctagaatgacttatattgtgaaacggagggagta 166
|||||||||||||| ||||||||||||||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagc 47
|||| ||||||||||| ||||||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggag 160
||||||||||||| |||||||| |||| ||||||| || | ||| ||| ||||||||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaacggag 136
Query: 161 ggagtat 167
|||||||
Sbjct: 137 ggagtat 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
||||| |||||||| |||| |||||||||| | |||| ||| ||||||||||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatt 50
|||| |||||||||||||||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcatt 42
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
|||| ||||||||||||||||||| | || ||||||| || |||||||| |||||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 73 atgaat 78
||||||
Sbjct: 82 atgaat 77
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctag 136
|||||||||| |||||||||||||| |||||||||||||
Sbjct: 50 tagattcattgacatcaatatgaatgtgggaaatgctag 88
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatg 132
|||||||||| |||||||||||||| |||||||||
Sbjct: 39 tagattcattgacatcaatatgaatgtgggaaatg 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 43 ctagcatttttcatattcatattgatgttaatgaatctag 82
||||||||| || |||||||||||||| |||||||||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctag 49
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 126 ggaaatgctagaatgacttatattgtgaaacggag 160
|||||||||||||||||||| ||||||||||||||
Sbjct: 49 ggaaatgctagaatgacttacattgtgaaacggag 83
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcattt 51
||||| |||||||||| ||||||||||||||||||||||
Sbjct: 89 tacttactccgtttcacaatgtaagtcattctagcattt 51
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctag 46
|||||||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 133 ctagaatgacttatattgtgaaacggagggagtat 167
||||||||||||| ||||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagc 47
||||||||||||||||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagc 39
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatt 50
|||| |||||||||||||||||||||| ||||||||||
Sbjct: 83 tactccctccgtttcataatgtaagtctttctagcatt 46
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 129 aatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||| |||||| ||| ||||||||||||||||
Sbjct: 46 aatgctagaaagacttacattatgaaacggagggagta 83
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 108 aacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggagggagta 166
|||||| ||||||||||| | |||||||||| | |||| ||||| ||||||||||||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 12 ctacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtt 71
||||| ||||||||| | |||||||| | |||||||||| |||||||||||| ||||||
Sbjct: 109 ctactccctccgttttacaatgtaagactttctagcattgctcatattcatatagatgtt 50
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 ttcctccgtttcataatgtaagtcattctagcatt 50
||||||||||||||||||||| | ||||||||||
Sbjct: 8 ttcctccgtttcataatgtaaaactttctagcatt 42
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| || | || |||| |||||||||| |||| |||||||||||
Sbjct: 73 tagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacg 14
Query: 158 gagggagtat 167
||||||||||
Sbjct: 13 gagggagtat 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 129 aatgctagaatgacttatattgtgaaacggagggagta 166
|||||||||| | ||||||||||| |||||||| ||||
Sbjct: 101 aatgctagaaagtcttatattgtggaacggaggaagta 138
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgatgtta 72
||||||||| ||||||||||||||| | ||||||| || || |||||||| ||||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 73 atgaatctag 82
||||||||||
Sbjct: 65 atgaatctag 74
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
||||||||||||||| |||||||| |||| || ||||||| | |||| ||| ||||||
Sbjct: 73 tagattcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatgaaacc 14
Query: 158 gagggagtatttt 170
|||| ||||||||
Sbjct: 13 gaggaagtatttt 1
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 9 caactacttcctccgtttcataatgtaagtcattctagcatttttcatattcatattgat 68
|||||||| |||| ||||||||||||||| | |||||||||| || ||| ||| |||
Sbjct: 1 caactactccctcagtttcataatgtaagactttctagcattgcccacatttttatggat 60
Query: 69 gttaatgaatctag 82
||||||||||||||
Sbjct: 61 gttaatgaatctag 74
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 157
|||||||||||||||| ||| ||| |||| |||||||||| | |||| ||| ||||||
Sbjct: 73 tagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaact 14
Query: 158 gagggagta 166
|||||||||
Sbjct: 13 gagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 13 tacttcctccgtttcataatgtaagtcattctagcatt 50
|||||||||| |||||||||||||| | ||||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcatt 93
