miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 258 bits (130), Expect = 2e-68
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 10 tagctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttag 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttag 60
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 120
Query: 130 ggagtagcta 139
||||||||||
Sbjct: 121 ggagtagcta 130
Score = 99.6 bits (50), Expect = 1e-20
Identities = 110/130 (84%)
Strand = Plus / Minus
Query: 10 tagctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttag 69
|||||||| ||||||||||| ||| |||||||||||||||||| || ||| ||||| |
Sbjct: 130 tagctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgat 71
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||| || ||| | ||||| ||| || |||||||||||||||||| ||| ||||||||||
Sbjct: 70 attaatgaatctaaatataaatgtggaaaatgctagaatgacttatattgtgaaacggag 11
Query: 130 ggagtagcta 139
| ||||||||
Sbjct: 10 gaagtagcta 1
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 163 bits (82), Expect = 8e-40
Identities = 118/129 (91%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 10 tagctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttag 69
|||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||| ||
Sbjct: 128 tagctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat--ag 71
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| ||| |||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 130 ggagtagct 138
|||||||||
Sbjct: 10 ggagtagct 2
Score = 123 bits (62), Expect = 7e-28
Identities = 113/129 (87%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 11 agctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttaga 70
||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||| |
Sbjct: 2 agctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatg 61
Query: 71 ttcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagg 130
|| || ||| | |||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 62 ttaatgaatct--atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 119
Query: 131 gagtagcta 139
|||||||||
Sbjct: 120 gagtagcta 128
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 161 bits (81), Expect = 3e-39
Identities = 113/123 (91%), Gaps = 3/123 (2%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||| |||||||||||||||||||||| ||| || |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatatt---atctagattc 61
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 62 attaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacggagggag 121
Query: 134 tag 136
|||
Sbjct: 122 tag 124
Score = 73.8 bits (37), Expect = 6e-13
Identities = 102/123 (82%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt 72
||||| ||||||||||| ||| |||||||||||||||||| | ||||| ||||| | ||
Sbjct: 124 ctactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtt 65
Query: 73 cattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
|| ||| | ||| ||||| |||||||||||||||||||||| ||||||||||| |
Sbjct: 64 aatgaatctagata---atatggaaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 133 gta 135
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 149 bits (75), Expect = 1e-35
Identities = 111/123 (90%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| ||||||||||||||| |||||||||||||||||| |||| || |||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatatatatattc 64
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
|||||||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 65 attaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaag 124
Query: 134 tag 136
|||
Sbjct: 125 tag 127
Score = 133 bits (67), Expect = 7e-31
Identities = 109/123 (88%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt 72
||||||||||||||||||||| |||||||||||||||||| | ||||| ||||| | |||
Sbjct: 127 ctacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatt 68
Query: 73 cattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
|| ||||| ||||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct: 67 aatgaatatatatatgaacgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
Query: 133 gta 135
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 141 bits (71), Expect = 3e-33
Identities = 115/131 (87%), Gaps = 9/131 (6%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Query: 67 --tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||| |||||||||||| || |||||| |||||||||||| ||| |||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 125 cggagggagta 135
|||||||||||
Sbjct: 125 cggagggagta 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 107/131 (81%), Gaps = 9/131 (6%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| |||||||||||||||||||||||||||| ||||| ||||||| ||||| | ||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 74 at---------taatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|| ||| |||||||||||| || |||||||||||||||||| ||| |||||
Sbjct: 75 atgaatctagataacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaa 16
Query: 125 cggagggagta 135
|||||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 139 bits (70), Expect = 1e-32
Identities = 113/127 (88%), Gaps = 4/127 (3%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattta----g 69
|||| |||||||||||||||||||||||||||||||||| ||||||| |||| || |
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatctatctag 64
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| |||||||||||| ||| ||||| ||||||| |||||||||||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacggag 124
Query: 130 ggagtag 136
| |||||
Sbjct: 125 gaagtag 131
Score = 83.8 bits (42), Expect = 6e-16
Identities = 106/127 (83%), Gaps = 4/127 (3%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt 72
||||||||||||||||| ||| |||| ||||||| |||||| |||||| ||||| | ||
Sbjct: 131 ctacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtt 72
Query: 73 cattaat----atcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 128
|| ||| || |||||||| || ||||||||||||||||||| ||| |||||||||
Sbjct: 71 aatgaatctagatagatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 12
Query: 129 gggagta 135
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 137 bits (69), Expect = 5e-32
Identities = 113/127 (88%), Gaps = 3/127 (2%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt 72
||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| | ||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 73 cattaat---atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
|| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 64 aatgaattacatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
Query: 130 ggagtag 136
||||||
Sbjct: 124 agagtag 130
Score = 123 bits (62), Expect = 7e-28
Identities = 106/120 (88%), Gaps = 3/120 (2%)
Strand = Plus / Minus
Query: 20 ctccgtttcacaatataagtcattctagcattttccacatttatatttag---attcatt 76
|||||||||| ||| |||||||||||||||||||||| ||| ||||| | |||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgatgtaattcatt 64
Query: 77 aatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
|| ||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||
Sbjct: 63 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 137 bits (69), Expect = 5e-32
Identities = 116/132 (87%), Gaps = 6/132 (4%)
Strand = Plus / Plus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt----- 66
|||||| ||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 67 -tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaac 125
|||||||||||| |||||||||||| || || |||||||||||||||| ||| ||||||
Sbjct: 63 ttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaac 122
Query: 126 ggagggagtagc 137
||||| ||||||
Sbjct: 123 ggaggaagtagc 134
Score = 121 bits (61), Expect = 3e-27
Identities = 114/132 (86%), Gaps = 6/132 (4%)
Strand = Plus / Minus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagat 71
||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| | |
Sbjct: 134 gctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgt 75
Query: 72 tcattaat------atcaatatgaatatgagaaatgctagaatgacttacattatgaaac 125
| || ||| |||||||||||| || |||||||||||||||||||||| ||||||
Sbjct: 74 taatgaatctaaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 15
Query: 126 ggagggagtagc 137
||||||||||||
Sbjct: 14 ggagggagtagc 3
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 137 bits (69), Expect = 5e-32
Identities = 112/126 (88%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt----tatatttag 69
|||| ||||||||||||||| |||||||||||||||||||||| ||| ||||| ||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatatatatatat 71
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| | |||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 130 ggagta 135
| ||||
Sbjct: 10 gaagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 107/126 (84%), Gaps = 4/126 (3%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 74 attaatatcaatat----gaatatgagaaatgctagaatgacttacattatgaaacggag 129
|| ||||| |||| ||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 65 atgaatatatatatatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 124
Query: 130 ggagta 135
||||||
Sbjct: 125 ggagta 130
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 137 bits (69), Expect = 5e-32
Identities = 114/130 (87%), Gaps = 8/130 (6%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
||||||||| |||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 67 -tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaac 125
|||||||||||| |||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 61 atagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 120
Query: 126 ggagggagta 135
|||||||||
Sbjct: 121 agagggagta 130
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| |||| |||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatatt 78
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 131 bits (66), Expect = 3e-30
Identities = 112/127 (88%), Gaps = 4/127 (3%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatattt----a 68
||||| ||||| ||||| ||| |||||||||||||||||| |||||| |||||| |
Sbjct: 131 ctactccctccatttcataatgtaagtcattctagcatttctcacattcatatttgtcta 72
Query: 69 gattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 128
|||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacgga 12
Query: 129 gggagta 135
|| ||||
Sbjct: 11 ggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 108/127 (85%), Gaps = 4/127 (3%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||| ||| ||||||||||||| |||| |||||| ||||| | ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 74 attaatatc----aatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
|| ||| | ||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 65 atgaatctagacaaatatgaatgtgagaaatgctagaatgacttacattatgaaatggag 124
Query: 130 ggagtag 136
|||||||
Sbjct: 125 ggagtag 131
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 129 bits (65), Expect = 1e-29
Identities = 112/128 (87%), Gaps = 6/128 (4%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------t 67
|||||||||||||||||||| |||||||||||||||||| ||||||| ||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatct 64
Query: 68 agattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgg 127
|||||||||| || ||||||||| || ||||||||||||||||||| ||| ||||||||
Sbjct: 65 agattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgg 124
Query: 128 agggagta 135
||||||||
Sbjct: 125 agggagta 132
Score = 105 bits (53), Expect = 2e-22
Identities = 109/128 (85%), Gaps = 6/128 (4%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| |||||||||||||||||||||||||||||||||| ||||||| ||||| | |
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 74 attaat------atcaatatgaatatgagaaatgctagaatgacttacattatgaaacgg 127
|| ||| |||||||||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 72 atgaatctagatatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 128 agggagta 135
||| ||||
Sbjct: 12 aggaagta 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 129 bits (65), Expect = 1e-29
Identities = 112/128 (87%), Gaps = 6/128 (4%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------t 67
|||||||||||||||||||| |||||||||||||||||| ||||||| ||||| |
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatct 73
Query: 68 agattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgg 127
|||||||||| || ||||||||| || ||||||||||||||||||| ||| ||||||||
Sbjct: 72 agattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgg 13
Query: 128 agggagta 135
||||||||
Sbjct: 12 agggagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 109/128 (85%), Gaps = 6/128 (4%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| |||||||||||||||||||||||||||||||||| ||||||| ||||| | |
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 74 attaat------atcaatatgaatatgagaaatgctagaatgacttacattatgaaacgg 127
|| ||| |||||||||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 65 atgaatctagatatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 124
Query: 128 agggagta 135
||| ||||
Sbjct: 125 aggaagta 132
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 129 bits (65), Expect = 1e-29
Identities = 114/132 (86%), Gaps = 10/132 (7%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatattt 77
Query: 67 ---tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
|| ||| |||||||||||||| ||| || ||||||||||||||||||||||| ||||
Sbjct: 76 atctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 124 acggagggagta 135
||||||||||||
Sbjct: 16 acggagggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 110/132 (83%), Gaps = 10/132 (7%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt- 72
|||| ||||||||||||||| |||||||||||||||||| ||||||||||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 73 ---------cattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
|| ||||||||||||||| || ||||||||||||||||||| ||| ||||
Sbjct: 65 ataaatttagataaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaa 124
Query: 124 acggagggagta 135
||||||| ||||
Sbjct: 125 acggaggaagta 136
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 129 bits (65), Expect = 1e-29
Identities = 68/69 (98%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 85 tatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||| || ||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaagta 145
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattt 52
|||| ||||||||||| ||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 127 bits (64), Expect = 5e-29
Identities = 109/122 (89%), Gaps = 4/122 (3%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||||||||||||| |||||||| || ||||||||| |||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatatt--gatg- 66
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
|||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 65 -ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggag 7
Query: 134 ta 135
||
Sbjct: 6 ta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 105/122 (86%), Gaps = 4/122 (3%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| ||||||||||||||| ||||||||| |||||||| || ||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatatt--gatg- 61
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
|||| |||||||| |||||||||||||||| ||||||||| ||| ||||||||||| ||
Sbjct: 62 -ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaag 120
Query: 134 ta 135
||
Sbjct: 121 ta 122
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 127 bits (64), Expect = 5e-29
Identities = 103/115 (89%), Gaps = 7/115 (6%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcata-ttagattc 61
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 128
||||||||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 60 ------atcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 79.8 bits (40), Expect = 9e-15
Identities = 97/115 (84%), Gaps = 7/115 (6%)
Strand = Plus / Plus
Query: 21 tccgtttcacaatataagtcattctagcattttccacatttatatttagattcattaata 80
|||||||||||||||||||||||||||||||| || ||||| | ||| || |||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttccc------atattcatattgatgaatc 65
Query: 81 tcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
| ||||||||| || ||||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 66 t-aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 127 bits (64), Expect = 5e-29
Identities = 112/130 (86%), Gaps = 11/130 (8%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt-----------ta 62
|||||||||||||||||||||||||||||| ||||||||| |||||| ||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
Query: 63 tatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatga 122
||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||
Sbjct: 77 tatgtagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtga 18
Query: 123 aacggaggga 132
||||||||||
Sbjct: 17 aacggaggga 8
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 19 cctccgtttcacaatataagtcattctagcattt 52
||||||||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcattt 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||| |||||| ||| |||||||| ||||||||| ||| ||||||||||| ||||
Sbjct: 82 atcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 123 bits (62), Expect = 7e-28
Identities = 115/134 (85%), Gaps = 9/134 (6%)
Strand = Plus / Minus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagat 71
||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| | ||
Sbjct: 137 gctacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatat 78
Query: 72 t---------cattaatatcaatatgaatatgagaaatgctagaatgacttacattatga 122
| ||||||||||||| ||||| || ||||||||||||||||||| ||| |||
Sbjct: 77 taatgaatctcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtga 18
Query: 123 aacggagggagtag 136
||||||||||||||
Sbjct: 17 aacggagggagtag 4
Score = 113 bits (57), Expect = 7e-25
Identities = 115/134 (85%), Gaps = 9/134 (6%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattt------tccacatttatatt 66
||||| |||||||||||||||||||||||||||||||||| | |||||| |||||
Sbjct: 4 ctactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatt 63
Query: 67 ta---gattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
| ||||||||||||||||| ||||| || ||||||||||||||||||| ||| ||||
Sbjct: 64 aatgagattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaa 123
Query: 124 acggagggagtagc 137
||||||| ||||||
Sbjct: 124 acggaggaagtagc 137
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 123 bits (62), Expect = 7e-28
Identities = 107/124 (86%), Gaps = 11/124 (8%)
Strand = Plus / Plus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagat 71
|||||| ||||||||||||||| |||||||||||||||| |||| |||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcat-----------atatctagat 51
Query: 72 tcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 52 tcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagga 111
Query: 132 agta 135
||||
Sbjct: 112 agta 115
Score = 75.8 bits (38), Expect = 1e-13
Identities = 101/124 (81%), Gaps = 11/124 (8%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||| ||| |||||||||||||||||| ||||||| ||||| | |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
|| ||| | |||| |||||||||||||||||||| ||||||||||||||
Sbjct: 55 atgaatctagatat-----------atgctagaatgacttacattgtgaaacggagggag 7
Query: 134 tagc 137
||||
Sbjct: 6 tagc 3
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 123 bits (62), Expect = 7e-28
Identities = 113/129 (87%), Gaps = 7/129 (5%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttata------tt 66
||||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||
Sbjct: 132 ctacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||| ||| |||||||||||| || |||||||||||| ||||||||| |||||||
Sbjct: 72 tagattca-taacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 110/129 (85%), Gaps = 7/129 (5%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| ||||||||||||||| ||||| |||||||||||||||||||| ||||| | ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt- 63
Query: 74 attaat------atcaatatgaatatgagaaatgctagaatgacttacattatgaaacgg 127
|| ||| ||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 64 atgaatctaaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgg 123
Query: 128 agggagtag 136
||| |||||
Sbjct: 124 aggaagtag 132
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 123 bits (62), Expect = 7e-28
Identities = 112/129 (86%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------ 66
||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||
Sbjct: 133 ctacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgtc 74
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||||||| |||||| ||||||||| ||||||||||||| || ||||
Sbjct: 73 tagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 106/129 (82%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| |||||||| |||||| ||||||||| |||||||| ||| ||||||||| | |
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 74 attaat------atcaatatgaatatgagaaatgctagaatgacttacattatgaaacgg 127
|| ||| |||||||||||| || |||||||||||||| |||||||| ||||||||
Sbjct: 65 atgaatctagacatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacgg 124
Query: 128 agggagtag 136
||| |||||
Sbjct: 125 aggaagtag 133
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 123 bits (62), Expect = 7e-28
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 62 atatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatg 121
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 78 atatctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtg 19
Query: 122 aaacggagggagta 135
||||||||||||||
Sbjct: 18 aaacggagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 87 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 142
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 121 bits (61), Expect = 3e-27
Identities = 113/132 (85%), Gaps = 10/132 (7%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatattt 77
Query: 67 ---tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
|| ||| |||||||||||||| ||| || |||||||||||||||||||||| ||||
Sbjct: 76 atctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaa 17
Query: 124 acggagggagta 135
||||||||||||
Sbjct: 16 acggagggagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 111/132 (84%), Gaps = 10/132 (7%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt- 72
|||| ||||||||||||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 73 ---------cattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
|| ||||||||||||||| || ||||||||||||||||||| ||| ||||
Sbjct: 65 ataaatttagataaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaa 124
Query: 124 acggagggagta 135
||||||| ||||
Sbjct: 125 acggaggaagta 136
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 121 bits (61), Expect = 3e-27
Identities = 113/132 (85%), Gaps = 10/132 (7%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
|||||||||||||||||||| |||||||||||||||||| ||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatatct 64
Query: 67 ---tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
|||||||||||| |||||||||||| || |||||| |||||||||||||||| ||||
Sbjct: 65 atctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaa 124
Query: 124 acggagggagta 135
||||||||||||
Sbjct: 125 acggagggagta 136
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 78 atatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 62 atatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 119 bits (60), Expect = 1e-26
Identities = 110/125 (88%), Gaps = 5/125 (4%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacattta---tatttaga 70
|||||||||||||||||||| |||||||||||||||||| | || || ||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt--cgaatctagactatctaga 62
Query: 71 ttcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagg 130
|||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct: 63 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacggagg 122
Query: 131 gagta 135
||||
Sbjct: 123 aagta 127
Score = 85.7 bits (43), Expect = 2e-16
Identities = 104/123 (84%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 74 attaatatcaata-tgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
|| ||| | ||| | | || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 67 atgaatctagatagtctagattcgaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 133 gta 135
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 117 bits (59), Expect = 4e-26
Identities = 112/131 (85%), Gaps = 9/131 (6%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
|||| ||||| ||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatattatatatg 64
Query: 67 --tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
||||||||||||||| ||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 125 cggagggagta 135
|||||| ||||
Sbjct: 125 cggaggaagta 135
Score = 101 bits (51), Expect = 3e-21
Identities = 110/131 (83%), Gaps = 9/131 (6%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 74 attaatat---------caatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|| ||| | ||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 75 atgaatctagacatatataatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 125 cggagggagta 135
||||||||||
Sbjct: 15 tggagggagta 5
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 115 bits (58), Expect = 2e-25
Identities = 114/135 (84%), Gaps = 12/135 (8%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatattta---- 68
||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||| |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 63
Query: 69 --------gattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||||||| |||||||||||| || |||||||||||||||||||||||||
Sbjct: 64 aatgaatcgattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattat 123
Query: 121 gaaacggagggagta 135
|||||||||||||||
Sbjct: 124 gaaacggagggagta 138
Score = 99.6 bits (50), Expect = 1e-20
Identities = 112/135 (82%), Gaps = 12/135 (8%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattta----- 68
|||| ||||||||||| ||| |||||||||||||||||| ||||||| ||||| |
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 69 -------gattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatg 121
||||||||| |||||||||||| || ||||||||||||||||||||||| ||
Sbjct: 78 atgaatcgattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 122 aaacggagggagtag 136
|||||||||||||||
Sbjct: 18 aaacggagggagtag 4
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 115 bits (58), Expect = 2e-25
Identities = 109/124 (87%), Gaps = 3/124 (2%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| ||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| |
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatatt--gatac 62
Query: 74 attaa-tatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
|| | ||||||||||||| || |||||||||||| ||||||||| |||||||||||||
Sbjct: 63 atgatgtatcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggaggga 122
Query: 133 gtag 136
||||
Sbjct: 123 gtag 126
Score = 107 bits (54), Expect = 4e-23
Identities = 108/124 (87%), Gaps = 3/124 (2%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt 72
||||| ||||||||||||||| ||||| |||||||||||| ||||||| ||||| |||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcatttnccacattcatatt--gata 69
Query: 73 cattaa-tatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
||| | ||||||||||||| || |||||||||||| ||||||||| ||||||||||||
Sbjct: 68 catcatgtatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggaggg 9
Query: 132 agta 135
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 115 bits (58), Expect = 2e-25
Identities = 106/122 (86%), Gaps = 5/122 (4%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||| ||||||||| |||||||| ||||||| |||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatat-----ttc 59
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
||||| |||| ||| ||| || ||||||||||||||||||| ||| ||||||||||||||
Sbjct: 60 attaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagggag 119
Query: 134 ta 135
||
Sbjct: 120 ta 121
Score = 91.7 bits (46), Expect = 2e-18
Identities = 103/122 (84%), Gaps = 5/122 (4%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| ||||||||||||||| |||||||||||||||||| ||||||||||| | | ||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
|| | ||||||||| || ||||||||| ||||||||||||| ||||||||||| ||
Sbjct: 61 atga-----aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaag 7
Query: 134 ta 135
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 71 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 130
Query: 127 gagggagta 135
|||||||||
Sbjct: 131 gagggagta 139
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 86 atgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 113 bits (57), Expect = 7e-25
Identities = 109/124 (87%), Gaps = 3/124 (2%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt 72
||||| ||||||||||||||| ||||| |||||||||||||||||||| ||||| |||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcattttccacattcatatt--gata 69
Query: 73 catta-atatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
||| | ||||||||||||| || |||||||||||| ||||||||| ||||||||||||
Sbjct: 68 catcatgtatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggaggg 9
Query: 132 agta 135
||||
Sbjct: 8 agta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 109/124 (87%), Gaps = 3/124 (2%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| ||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| |
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatatt--gatac 62
Query: 74 attaa-tatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
|| | ||||||||||||| || |||||||||||| ||||||||| |||||||||||||
Sbjct: 63 atgatgtatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggaggga 122
Query: 133 gtag 136
||||
Sbjct: 123 gtag 126
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 113 bits (57), Expect = 7e-25
Identities = 109/126 (86%), Gaps = 4/126 (3%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattt----ag 69
|||||||||||||||||||| ||||| |||||||||||| |||||| |||| | ||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatatatgtctag 64
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
|||||||| || ||||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 65 attcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 124
Query: 130 ggagta 135
| ||||
Sbjct: 125 gaagta 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 108/126 (85%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||| |||||||||||||||||| ||||||| ||||| | |
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 74 attaatat---ca-atatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
|| ||| | || |||||||| |||||||||||||||| ||||||||| ||||||||||
Sbjct: 70 atgaatctagacatatatgaatgtgagaaatgctagaataacttacattgtgaaacggag 11
Query: 130 ggagta 135
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 86 atgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 139
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacg 131
Query: 127 gagggagta 135
|||| ||||
Sbjct: 132 gaggaagta 140
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 113 bits (57), Expect = 7e-25
Identities = 109/126 (86%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||| |||||||||||||||||| ||||||| |||| | ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 74 at----taatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
|| ||| ||| |||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 70 atgagttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 11
Query: 130 ggagta 135
||||||
Sbjct: 10 ggagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 110/127 (86%), Gaps = 6/127 (4%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat-----tta 68
|||| ||||||||||||||| |||||||||||||||||| ||||||| |||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 69 gattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 128
| ||||||| ||| |||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 65 -actcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 123
Query: 129 gggagta 135
|| ||||
Sbjct: 124 ggaagta 130
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 113 bits (57), Expect = 7e-25
Identities = 114/136 (83%), Gaps = 14/136 (10%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
|||||||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 67 -------tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacatta 119
|||||||||||| |||||||||||| || ||||||||||||||||||| |||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 120 tgaaacggagggagta 135
||||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| |||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatt 88
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 111 bits (56), Expect = 3e-24
Identities = 112/132 (84%), Gaps = 9/132 (6%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------ 66
||||| ||||||||||| ||| |||||||||||||||||| ||||||| |||||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Query: 67 ---tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
|||||||||| | |||||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 76 gtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 124 acggagggagta 135
||||||| ||||
Sbjct: 16 acggaggaagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 112/132 (84%), Gaps = 9/132 (6%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||| |||||||||||||||||| ||||||| ||||| | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 74 attaat---------atcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|| ||| |||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 65 atgaatctagacaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 124
Query: 125 cggagggagtag 136
||||||||||||
Sbjct: 125 cggagggagtag 136
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 87 tttagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 146
Query: 125 cggagggagta 135
|||||||||||
Sbjct: 147 cggagggagta 157
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 105
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 109 bits (55), Expect = 1e-23
Identities = 113/135 (83%), Gaps = 13/135 (9%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
|||| ||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatgcta 80
Query: 67 ------tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||||||||| |||||||| |||||||||||||||| ||||||||||||| |
Sbjct: 79 tatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgt 20
Query: 121 gaaacggagggagta 135
|||||||||| ||||
Sbjct: 19 gaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| ||||||||| |||||||| || |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatatt 57
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||||| || |||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 84 atcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 109 bits (55), Expect = 1e-23
Identities = 114/137 (83%), Gaps = 15/137 (10%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattta----- 68
|||||||||||||||||||| |||||||||||||||||| ||||||| ||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 69 ----------gattcattaatatcaatatgaatatgagaaatgctagaatgacttacatt 118
|||||||||| |||||||||||| |||||||||||||||||| |||||||
Sbjct: 65 atgaatcattgattcattaacatcaatatgaatgtgagaaatgctagaatgaattacatt 124
Query: 119 atgaaacggagggagta 135
||||||||||||||||
Sbjct: 125 gtgaaacggagggagta 141
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 69 gattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 128
|||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 129 gggagta 135
|| ||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| ||||||||||||||||||||||||| || ||||||||||||||||||| ||| |
Sbjct: 84 tatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgt 143
Query: 121 gaaacggagggagta 135
|||||||||||||||
Sbjct: 144 gaaacggagggagta 158
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||||||||||||||||| | ||||||||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattctaactttttccacattcatatt 57
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| |||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatt 106
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| || ||||||||| || ||| | |||||||||||| ||| |||||||
Sbjct: 73 tagattcattaacattaatatgaatgtggaaaaagttagaatgacttatattgtgaaacg 14
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 13 gaggaagtag 4
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||||||||||||||||| || ||||||||||||||||||||||| ||| |||
Sbjct: 90 tagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattgtgatacg 149
Query: 127 gagggagtagc 137
|||||||||||
Sbjct: 150 gagggagtagc 160
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||| ||| || ||||||| | ||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| ||||||||| | |||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatatt 57
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||| ||||||| ||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 160 gctactccctccgtatcacaatgtaagtcattctagcatttcccacattcatatt 106
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 109 bits (55), Expect = 1e-23
Identities = 113/134 (84%), Gaps = 10/134 (7%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------ 66
||||||||||||||||||||| ||||| ||||||| |||| || ||| |||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatgct 63
Query: 67 ----tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatga 122
||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 64 agtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatga 123
Query: 123 aacggagggagtag 136
||||||||||||||
Sbjct: 124 aacggagggagtag 137
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |||||
Sbjct: 60 atcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 109 bits (55), Expect = 1e-23
Identities = 112/132 (84%), Gaps = 8/132 (6%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------ 66
||||||||||||||||| ||| ||||||||||| ||||| ||||||||| | |
Sbjct: 135 ctacttcctccgtttcataatggaagtcattctaacatttcccacatttacagtgatgtt 76
Query: 67 --tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||| |||||||||||| || |||||||||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 125 cggagggagtag 136
||||||||||||
Sbjct: 15 cggagggagtag 4
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatatt 57
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacg 14
Query: 127 gagggagtag 136
||||||||||
Sbjct: 13 gagggagtag 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||| ||||| |||||||| ||| ||| ||||||||||||||||||||| |||||||
Sbjct: 90 tagatttattaacatcaatataaatgtga--aatgctagaatgacttacattgtgaaacg 147
Query: 127 gagggagtagct 138
||||||||||||
Sbjct: 148 gagggagtagct 159
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/56 (92%), Gaps = 2/56 (3%)
Strand = Plus / Minus
Query: 11 agctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 159 agctactccctccgtttcacaatgtaagtcattctagcattt--cacatttatatt 106
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| |||||||||| ||||||| ||| ||| |||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatatt 57
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 107 bits (54), Expect = 4e-23
Identities = 108/125 (86%), Gaps = 2/125 (1%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatattt--aga 70
||||| ||||||||||| ||| |||||||||||||||||| |||||| ||||| | |||
Sbjct: 129 ctactccctccgtttcataatgtaagtcattctagcatttcccacatctatatatctaga 70
Query: 71 ttcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagg 130
|||| |||| || |||| ||| ||||||||| |||||||||||| ||||||||||| |||
Sbjct: 69 ttcactaatttccatataaatgtgagaaatgttagaatgacttatattatgaaacgaagg 10
Query: 131 gagta 135
||||
Sbjct: 9 aagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 105/125 (84%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||| ||||||| |||||||||||||||| ||||| ||||||||||| | |||
Sbjct: 5 tacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaatta 64
Query: 74 attaatatcaatatgaatatgag--aaatgctagaatgacttacattatgaaacggaggg 131
| ||| | |||| | ||| | |||||||||||||||||||||||||||||||||||
Sbjct: 65 gtgaatctagatatatagatgtgggaaatgctagaatgacttacattatgaaacggaggg 124
Query: 132 agtag 136
|||||
Sbjct: 125 agtag 129
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 90 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 149
Query: 127 gagggagtag 136
||||||||||
Sbjct: 150 gagggagtag 159
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattta 68
|||| ||||||||||||||| ||||||||| |||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatattta 59
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
|||||||| ||||||||| || |||||||| ||||||||||||| ||||||||||||||
Sbjct: 66 attaatataaatatgaatgtggaaaatgctataatgacttacattgtgaaacggagggag 7
Query: 134 ta 135
||
Sbjct: 6 ta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 106
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 81 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 140
Query: 127 gagggagtag 136
||||||||||
Sbjct: 141 gagggagtag 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 13 gaggaagtag 4
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 97
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 66 ttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaac 125
||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 74 ttagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaac 15
Query: 126 ggagggagta 135
||||||||||
Sbjct: 14 ggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 87 tgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
||||| ||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 110 tgaatgtgaaaaatgctacaatgacttacattatgaaacagagggagtag 159
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattt 52
|||| ||||||||||| ||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 88 tagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaacg 147
Query: 127 gagggagtag 136
||||||||||
Sbjct: 148 gagggagtag 157
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||| ||||| |||||||| ||| ||| ||||||||||||||||||||| |||||||
Sbjct: 71 tagatttattaacatcaatataaatgtga--aatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagtagct 138
||||||||||||
Sbjct: 13 gagggagtagct 2
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/56 (92%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 11 agctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 2 agctactccctccgtttcacaatgtaagtcattctagcattt--cacatttatatt 55
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| |||||||||| ||||||| ||| ||| |||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatatt 104
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||| | |||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 84 tagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacg 143
Query: 127 gagggagtag 136
||||||||||
Sbjct: 144 gagggagtag 153
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||| | |||||||||||| || |||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| |||||||||||| ||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatatt 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||| ||| |||||||||||||||||| ||||||| |||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatatt 100
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 107 bits (54), Expect = 4e-23
Identities = 108/127 (85%), Gaps = 8/127 (6%)
Strand = Plus / Plus
Query: 21 tccgtttcacaatataagtcattctagcattttccacatttatattta--------gatt 72
||||||||||||| ||||||||| | |||||||||||||| ||||| | ||||
Sbjct: 12 tccgtttcacaatgtaagtcattttggcattttccacattcatattgatgtatcttgatt 71
Query: 73 cattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
|||||| |||||||||||| || ||||||||| ||||||||||||| ||||||||||| |
Sbjct: 72 cattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaa 131
Query: 133 gtagcta 139
|||||||
Sbjct: 132 gtagcta 138
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 10 tagctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||||||| ||||||||| |||||||| ||||||| |||||
Sbjct: 138 tagctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 82
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 105 bits (53), Expect = 2e-22
Identities = 106/123 (86%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt 72
||||| |||| |||||||||| ||||||||||||||| || ||||||| ||||| | |
Sbjct: 124 ctactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattga---t 68
Query: 73 cattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
|||||| |||||||||||| || || ||||| ||||||||||||||||||||||||| |
Sbjct: 67 cattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaa 8
Query: 133 gta 135
|||
Sbjct: 7 gta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 108/124 (87%), Gaps = 5/124 (4%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||| ||| ||||||||| ||||| |||||||||| ||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatatt--gatg- 61
Query: 74 attaat-atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
||||| |||||||||||| || ||| ||||||||||||||||||| |||||| ||||||
Sbjct: 62 -ttaatgatcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagaggga 120
Query: 133 gtag 136
||||
Sbjct: 121 gtag 124
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 77 tagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacg 136
Query: 127 gagggagta 135
|||||||||
Sbjct: 137 gagggagta 145
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 73 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 14
Query: 127 gagg 130
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 105 bits (53), Expect = 2e-22
Identities = 113/136 (83%), Gaps = 14/136 (10%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
|||||||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 67 -------tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacatta 119
|||||||||||| |||||||||||| || |||||||||||||||||| |||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 120 tgaaacggagggagta 135
||||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatatt 88
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 127 gagggagtagcta 139
|||| ||||||||
Sbjct: 13 gaggaagtagcta 1
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 71 ttcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagg 130
|||||||| |||||||||||| |||||||||||||||||||||||||| |||||| ||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaaccgagg 144
Query: 131 gagtag 136
||||||
Sbjct: 145 gagtag 150
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 10 tagctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||
Sbjct: 1 tagctacttcctccgtttcataatgtaagtcattctagcattttccacattcatatt 57
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| |||| |||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 150 ctactccctcggtttcacaatgtaagtcattctagcatttctcacattcatatt 97
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 127 gagggagta 135
|||||||||
Sbjct: 138 gagggagta 146
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 127 ga 128
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 107 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||||||| |||||||||||||||||| |||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatat 107
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||| ||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatatgggtaatgctagaatgacttacattatgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 83.8 bits (42), Expect = 6e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 55 cacatttatatttagattcattaatatcaatatgaatatgagaaatgctagaatgactta 114
||||| ||||| || ||||||||| ||| ||||| || || | |||||||||||||||||
Sbjct: 85 cacatctatatctaaattcattaacatctatatgtatgtgggcaatgctagaatgactta 26
Query: 115 cattatgaaacggagggagtag 136
|||||||||||||||| |||||
Sbjct: 25 cattatgaaacggaggaagtag 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcatt 51
||||||||||||||||| ||| |||||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcatt 42
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||| ||||||||||| ||| |||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcatt 121
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 127 gagggagtagcta 139
|||| ||||||||
Sbjct: 13 gaggaagtagcta 1
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 71 ttcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagg 130
|||||||| |||||||||||| || ||||||||||||||||||||||| |||||| ||||
Sbjct: 82 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaccgagg 141
Query: 131 gagtag 136
||||||
Sbjct: 142 gagtag 147
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||| ||||| |||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 77 tagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaacg 136
Query: 127 gagggagta 135
|||||||||
Sbjct: 137 gagggagta 145
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||||| || ||||||||| ||||||||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||||| || |||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatatt 93
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 63 tatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatga 122
||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||
Sbjct: 86 tatttagattcattaatatcaatatgaatgtgaaaaatgctagaatgacttatattgtgg 145
Query: 123 aacggagggagta 135
|||||||||||||
Sbjct: 146 aacggagggagta 158
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| | |||||| ||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagtag 136
||||||||||
Sbjct: 13 gagggagtag 4
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatatt 57
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| |||||||| |||||||||||||||||||||||||| |||||| |||||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatatt 106
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcattaatatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| ||| |||| ||||||||||||||||| |||||||
Sbjct: 90 tagattcattaaaatcaatatgaatgtgaaaaatactagaatgacttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||| ||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatatt 57
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatatt 106
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 90 tagattcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| ||||||||||| | ||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||||||||||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatt 42
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 106
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatatt 104
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 68 agattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgg 127
||||||||||| |||||||| || || ||||||||||||||||||| ||| ||||||||
Sbjct: 89 agattcattaacatcaatataaacgtgggaaatgctagaatgacttatattgtgaaacgg 148
Query: 128 agggagta 135
||| ||||
Sbjct: 149 aggaagta 156
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 105 bits (53), Expect = 2e-22
Identities = 107/124 (86%), Gaps = 2/124 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagat-- 71
|||| ||||||||||||||| ||| | ||| |||||||||||||||| ||||| | |
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
Query: 72 tcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
||||||| |||||||||||| || |||||||| ||||||||||||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 132 agta 135
||||
Sbjct: 8 agta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 106/124 (85%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| ||||||||||||||| ||||||||| |||||||||||||||| ||||| | ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 74 at--taatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
|| ||| |||||||||||| || |||||||| ||| | ||||||| ||||||||||||
Sbjct: 65 atgataacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggaggg 124
Query: 132 agta 135
||||
Sbjct: 125 agta 128
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 90 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 149
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 150 gaggaagtag 159
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 106
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatatt 57
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| |||||||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatattagaatgacttacattgtgaaacggag 152
Query: 130 ggagtag 136
| |||||
Sbjct: 153 gaagtag 159
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||||| |||||||||||| |||| ||||||| |||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatatt 106
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 63 tatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatga 122
||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |||
Sbjct: 86 tatttagattcattaatatcaatatgaatgtggaaaatgttagaatgacttacattgtga 145
Query: 123 aacggagggagta 135
|||||||||||||
Sbjct: 146 aacggagggagta 158
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||| ||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagtagc 137
|||||||||||
Sbjct: 13 gagggagtagc 3
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||||| ||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||| ||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatatt 106
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 105 bits (53), Expect = 2e-22
Identities = 112/134 (83%), Gaps = 12/134 (8%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
||||||||||||||||||||||||||||||||| |||| | ||||| |||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtta 79
Query: 67 -----tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatg 121
|||||||||||| |||||||||||||| |||||||||||||||||||||| ||
Sbjct: 78 atatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtg 19
Query: 122 aaacggagggagta 135
||||||||||||||
Sbjct: 18 aaacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttc 54
|||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttc 45
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
||||| |||||||||||| | ||||| |||||||||||| ||| ||||||||||| ||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 134 ta 135
||
Sbjct: 137 ta 138
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 105 bits (53), Expect = 2e-22
Identities = 105/123 (85%), Gaps = 12/123 (9%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt 72
|||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
Sbjct: 115 ctacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga---- 60
Query: 73 cattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
|||||||||||| || ||||||||||||||||||| ||| |||||||||||||
Sbjct: 59 -------atcaatatgaatgtg-gaaatgctagaatgacttatattgtgaaacggaggga 8
Query: 133 gta 135
|||
Sbjct: 7 gta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 104/123 (84%), Gaps = 12/123 (9%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| ||||||||||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagca-tttccacattcatatt--gat-- 59
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
||||||||||| || ||||||||||||||||||| ||| ||||||||||| ||
Sbjct: 60 -------tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaag 112
Query: 134 tag 136
|||
Sbjct: 113 tag 115
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || |||||| || |||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacg 14
Query: 127 gagggagtagct 138
||||||||||||
Sbjct: 13 gagggagtagct 2
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||||| |||||||||||||||||| ||| || ||||
Sbjct: 78 tagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaacg 137
Query: 127 gagggagta 135
|||| ||||
Sbjct: 138 gaggaagta 146
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 11 agctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||| ||||||||||| ||| ||||||||| || ||||| ||||||| |||||
Sbjct: 2 agctactccctccgtttcataatgtaagtcattttaccatttcccacattcatatt 57
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||| | |||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 90 tagattcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 149
Query: 127 gagggagtagct 138
|||||| |||||
Sbjct: 150 gagggattagct 161
Score = 81.8 bits (41), Expect = 2e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 81 tcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
||||||||||| ||||| |||||||||||||||||||| |||||||||||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacattgtgaaacggaggga 8
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 19 cctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 106
Score = 58.0 bits (29), Expect = 3e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 19 cctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||| |||||||||||||||| | |||||| |||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatatt 57
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| |||||||||||| ||| |||||||||| | |||||||||||||||||||||||
Sbjct: 84 tatatctagattcattaacatctatatgaatataggcaatgctagaatgacttacattat 143
Query: 121 gaaacggagggagtag 136
||||||||||||||||
Sbjct: 144 gaaacggagggagtag 159
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| |||||||||||| ||| |||||||| |||| | |||||||||||||||||||||
Sbjct: 79 tatatctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattat 20
Query: 121 gaaacggagggagtag 136
|||||||||| |||||
Sbjct: 19 gaaacggaggaagtag 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagca 49
||||||||||||||||| ||| |||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagca 40
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcatt 51
||||| ||||||||||| ||| |||||||||||||||||
Sbjct: 159 ctactccctccgtttcataatgtaagtcattctagcatt 121
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || |||||| || |||||||||||||||||||||
Sbjct: 78 tagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacg 137
Query: 127 gagggagtagct 138
||||||||||||
Sbjct: 138 gagggagtagct 149
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||||| |||||||||||||||||| ||| || ||||
Sbjct: 73 tagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 11 agctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||| ||||||||||| ||| ||||||||| || ||||| ||||||| |||||
Sbjct: 149 agctactccctccgtttcataatgtaagtcattttaccatttcccacattcatatt 94
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 103 bits (52), Expect = 7e-22
Identities = 111/130 (85%), Gaps = 8/130 (6%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt----tatatt--- 66
|||| ||||||||||| ||| |||||||||||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatatatattcat 64
Query: 67 -tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaac 125
|||||||||||| || |||||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 65 ctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaac 124
Query: 126 ggagggagta 135
||||| ||||
Sbjct: 125 ggaggaagta 134
Score = 81.8 bits (41), Expect = 2e-15
Identities = 107/130 (82%), Gaps = 8/130 (6%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||| |||||| ||||||||||||||| ||| ||||| | ||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 74 attaat--------atcaatatgaatatgagaaatgctagaatgacttacattatgaaac 125
|| ||| || |||||||| || ||||| |||||||||||||||||||||||
Sbjct: 74 atgaatctagatgaatatatatgaatgtggaaaatgatagaatgacttacattatgaaac 15
Query: 126 ggagggagta 135
||||||||||
Sbjct: 14 ggagggagta 5
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 101 bits (51), Expect = 3e-21
Identities = 110/132 (83%), Gaps = 12/132 (9%)
Strand = Plus / Plus
Query: 19 cctccgtttcacaatataagtcattctagcattttccacatttatatt------------ 66
||||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtatatgtc 69
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||| | || ||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 70 tagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 129
Query: 127 gagggagtagct 138
|||||| |||||
Sbjct: 130 gagggattagct 141
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
|||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 112/132 (84%), Gaps = 9/132 (6%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttag---- 69
||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 70 ----at-tcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|| |||||| |||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 75 atgaatctcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaa 16
Query: 125 cggagggagtag 136
| ||||||||||
Sbjct: 15 cagagggagtag 4
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 68 agattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgg 127
|||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 128 agggagta 135
||| ||||
Sbjct: 128 aggaagta 135
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||||||||||||| || ||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 84 tatatttagattcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgt 143
Query: 121 gaaacggagggagta 135
|||||||||||||||
Sbjct: 144 gaaacggagggagta 158
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| ||||||||| || ||||||||||| | |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgagaaatgataaaatgacttacaatgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||| ||||||||||||||| |||||||||||||||||| ||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 107
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||| |||||| |||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 61 tagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacg 120
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 121 gaggaagtag 130
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||| ||| |||||||||||||||||| ||||||| |||||
Sbjct: 130 ctacttcctccgtttcataatgtaagtcattctagcatttcccacattcatatt 77
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 110 acttacattatgaaacggagggagta 135
||||||||| ||||||||||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 99.6 bits (50), Expect = 1e-20
Identities = 112/133 (84%), Gaps = 11/133 (8%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattta----- 68
|||||||||||||||||||| |||||||||||||||||| ||||||| ||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 69 --gattc----attaatatcaatatgaatatgagaaatgctagaatgacttacattatga 122
|| || ||||| |||||||||||| || |||||||||||||||||||| || |||
Sbjct: 65 atgaatcttttattaacatcaatatgaatgtgggaaatgctagaatgacttactttgtga 124
Query: 123 aacggagggagta 135
|||||||||||||
Sbjct: 125 aacggagggagta 137
Score = 93.7 bits (47), Expect = 6e-19
Identities = 110/133 (82%), Gaps = 11/133 (8%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattta----- 68
|||| |||||||||||||| |||||||||||||||||| ||||||| ||||| |
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 69 ------gattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatga 122
||||||||| |||||||||||| || ||||||||||||||||||||||| |||
Sbjct: 77 ataaaagattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 123 aacggagggagta 135
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
||||||||||||| |||||||||||||||||||||| |||||||||||| ||| || ||
Sbjct: 88 tttagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtggaa 147
Query: 125 cggagggagtagct 138
||||||||||||||
Sbjct: 148 cggagggagtagct 161
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||| |||| ||||||||||||||| |||||||| ||| |||||
Sbjct: 4 ctacttcctccgttccacagtataagtcattctagtattttccatattcatatt 57
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 11 agctacttcctccgtttcacaatataagtcattctagcattt 52
||||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 161 agctactccctccgttccacaatataagtcattctaacattt 120
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
|||||||| ||||||||||||||| |||| ||||||||||||| | | || |||||||
Sbjct: 70 attcattagcatcaatatgaatatggaaaatactagaatgacttatactgtggaacggag 11
Query: 130 ggagtag 136
| |||||
Sbjct: 10 gaagtag 4
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 127 ga 128
||
Sbjct: 13 ga 12
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
Query: 127 gagggagta 135
|||||||||
Sbjct: 138 gagggagta 146
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 104/122 (85%), Gaps = 5/122 (4%)
Strand = Plus / Plus
Query: 19 cctccgtttcacaatataagtcattctagcattttccacatttatatt-----tagattc 73
|||||||||||||||||||||||||||| ||||| || ||| |||| |||||||
Sbjct: 10 cctccgtttcacaatataagtcattctatcatttctcaaattcatatgataactagattc 69
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
|||| ||||||||||| ||| ||||| |||||||||||||||| ||||||||||||||
Sbjct: 70 attagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacggagggag 129
Query: 134 ta 135
||
Sbjct: 130 ta 131
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
|||||||| ||||||||| |||||||||||| ||| |||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggaggga 8
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 111/133 (83%), Gaps = 10/133 (7%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
|||||||||||||||| ||| ||||||||||||||||| || ||||| ||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatatagatataa 77
Query: 67 ---tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
|||||||||||||||| ||||| ||||| | ||| |||||||||||||||||||||
Sbjct: 76 gtctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaa 17
Query: 124 acggagggagtag 136
|||||||||||||
Sbjct: 16 acggagggagtag 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 98 aatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||||||||||||||||||||| ||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagta 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattcta 46
||||| ||||||||||| ||| ||||||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattcta 37
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||| ||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 94 tagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaacg 153
Query: 127 gagggagtag 136
||||||||||
Sbjct: 154 gagggagtag 163
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 85 tatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 55 tatgaatatgcgaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatt 60
||||| ||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 163 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatt 116
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattt 52
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||||| | |||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaacg 14
Query: 127 gagggagtag 136
||||||||||
Sbjct: 13 gagggagtag 4
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| |||||||||||| ||| |||||||| |||| | |||||||||||||||||||||
Sbjct: 84 tatatctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattat 143
Query: 121 gaaacggagggagtag 136
|||||||||| |||||
Sbjct: 144 gaaacggaggaagtag 159
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagca 49
||||||||||||||||| ||| |||||||||||||||
Sbjct: 159 ctacttcctccgtttcataatgtaagtcattctagca 123
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcatt 51
||||| ||||||||||| ||| |||||||||||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 99.6 bits (50), Expect = 1e-20
Identities = 105/124 (84%), Gaps = 12/124 (9%)
Strand = Plus / Minus
Query: 13 ctacttcctccgttt-cacaatataagtcattctagcattttccacatttatatttagat 71
||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| |
Sbjct: 117 ctacttcctccgttttcacaatataagtcattctagcatttcccacattcatattga--- 61
Query: 72 tcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
|||||||||||| || ||||||||||||||||||| ||| ||||||||||||
Sbjct: 60 --------atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 132 agta 135
||||
Sbjct: 8 agta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| |||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| ||||||||||||| |||||||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatatgagcaatgctagaaagtcttacattatgaaacg 149
Query: 127 gagggagtag 136
||||||||||
Sbjct: 150 gagggagtag 159
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| || | ||| |||||| ||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||| ||| |||||| |||||| ||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatat 56
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 97.6 bits (49), Expect = 4e-20
Identities = 110/132 (83%), Gaps = 10/132 (7%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||| |||||||||||| ||||||||| ||| ||||| | ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 74 attaat----------atcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
|| ||| |||||||||||||||| |||| ||| ||||||||||||||||||
Sbjct: 65 atgaatgtagatagtcatcaatatgaatatgaaaaatactaaaatgacttacattatgaa 124
Query: 124 acggagggagta 135
||||||||||||
Sbjct: 125 acggagggagta 136
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggag 11
Query: 130 ggagta 135
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||||||||||||||||| || ||||| |||||||| |||||||| |||||||
Sbjct: 90 tagattcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 97 aaatgctagaatgacttacattatgaaacggagggagtagct 138
|||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggagggagtagct 2
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 11 agctacttcctccgtttcacaatataagtcattctagcattttc 54
||||||| ||||||||||||||| ||||||||||||| ||||||
Sbjct: 2 agctactccctccgtttcacaatgtaagtcattctagtattttc 45
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||| |||||||| |||| ||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatatt 106
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||||||||| || |||||||||||| ||||||||||||| |||||||
Sbjct: 90 tagattcattagcatcaatatggatgtgagaaatgctaaaatgacttacattgtgaaacg 149
Query: 127 gagggagtagcta 139
|||||||||||||
Sbjct: 150 gagggagtagcta 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||||||| | ||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaatataagtatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 10 tagctacttcctccgtttcacaatataagtcattctagcattt 52
|||||||| ||||||||||||||| ||||||||| ||||||||
Sbjct: 162 tagctactccctccgtttcacaatgtaagtcattttagcattt 120
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 107/126 (84%), Gaps = 4/126 (3%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattta----g 69
|||| ||||||||| ||||| ||||||||| ||| |||| |||||||||||| || |
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatatctatctag 64
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| ||||||||| | ||| |||||||| ||||||||||||| ||||||||||
Sbjct: 65 attcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacggag 124
Query: 130 ggagta 135
| ||||
Sbjct: 125 gaagta 130
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatttt 53
|||||||||||||||||||| ||||||||| |||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttt 91
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| | |||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||||||||||| || |||||| | ||||||||||||||||||||||
Sbjct: 90 tagattcattaccatcaatatgaatgtgggaaatggtggaatgacttacattatgaaacg 149
Query: 127 gagggagtag 136
|| |||||||
Sbjct: 150 gaaggagtag 159
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 110 acttacattatgaaacggagggagta 135
||||||||| ||||||||||||||||
Sbjct: 82 acttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggtagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 97 aaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||||||||||||||| ||||||||||| ||||
Sbjct: 102 aaatgctagaatgacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| ||||||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatggtagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|| ||||||
Sbjct: 13 gaaggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||||||||| |||||| | |||||||||||||||||||||| |||||||
Sbjct: 90 tagattcattaatatcaacatgaatttagaaaatgctagaatgacttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttc 54
|||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttc 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 21 tccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||| |||||||||||| ||||| |||||| |||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatatt 57
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || |||||||||||||||||||||| |||||||
Sbjct: 90 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatt 106
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||||||| || |||||||||||||| |||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatat 56
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||| |||||||| || |||||||||||||| |||||| |||||||
Sbjct: 73 tagattcattagcatctatatgaatgtggacaatgctagaatgacatacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 97.6 bits (49), Expect = 4e-20
Identities = 106/124 (85%), Gaps = 2/124 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttat--atttagat 71
|||| ||||||||||| ||| ||||||||| |||||||| || || ||| || |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcatttcacatatatatctatctagat 69
Query: 72 tcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
|||||| |||||||| |||||||||||| ||||||||||||| ||| |||||||||||
Sbjct: 68 tcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaacggagga 9
Query: 132 agta 135
||||
Sbjct: 8 agta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 105/124 (84%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||||||||||||||||| |||| || ||||||||| | |
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 74 attaatatcaata--tgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
|| ||| | ||| | ||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtgaaatgctacaatgacttacattatgaaacggaggg 124
Query: 132 agta 135
||||
Sbjct: 125 agta 128
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||||||||||||||| ||||||||| ||||||||| ||| |||||||
Sbjct: 81 tagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaacg 140
Query: 127 gagggagta 135
|||||||||
Sbjct: 141 gagggagta 149
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||||||||||||| |||||||| ||| ||| |||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatatt 97
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
||||||||| |||||||||| |||||| ||||||||||| |||||||
Sbjct: 5 tacttcctctgtttcacaatgtaagtc-ttctagcatttcccacatt 50
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 107/126 (84%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||| ||||||||||||||||||| ||| | |||||| | ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 74 attaat----atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
|| ||| || |||||||| |||||||| ||||||||||||||||| | ||||||||
Sbjct: 70 atgaatctagatagatatgaatgtgagaaatactagaatgacttacattgttaaacggag 11
Query: 130 ggagta 135
||||||
Sbjct: 10 ggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 106/126 (84%), Gaps = 4/126 (3%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattta----g 69
|||| ||||||||| ||||| ||||||||||||| |||| |||||| |||| || |
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatatctatctag 64
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| |||||||| | ||| |||||||||||||||||||||| ||||||||||
Sbjct: 65 attcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacggag 124
Query: 130 ggagta 135
| ||||
Sbjct: 125 gaagta 130
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| |||||||||||| | | |||||||||||||||||||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgcggaatatgctagaatgacttacattgtgaaacggag 152
Query: 130 ggagta 135
||||||
Sbjct: 153 ggagta 158
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattt 52
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||| |||| |||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatatt 106
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || ||||||||||||||||||||||| || ||||
Sbjct: 88 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 147
Query: 127 gagggagta 135
|||||||||
Sbjct: 148 gagggagta 156
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||| |||||| |||||||||||||||||||| ||||| |||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatatt 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| |||||||||||| | |||||||||||||||||||||| || |||||||
Sbjct: 70 attcattaacatcaatatgaatgtagaaaatgctagaatgacttacattgtggaacggag 11
Query: 130 ggagta 135
| ||||
Sbjct: 10 gaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| |||||||| |||||| |||||||||||||||||| ||||||| |||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatatt 104
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||||||||||||| |||||||||||||||||||||| ||| |||||||
Sbjct: 73 tagattcattagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||||||||||| || ||||| |||||||||||||||| |||||||
Sbjct: 90 tagattcattagcatcaatatgaatgtggtaaatgttagaatgacttacattgtgaaacg 149
Query: 127 gagggagtagc 137
|||||||||||
Sbjct: 150 gagggagtagc 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatatt 57
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||| ||||||||||||||| |||||||||||| ||||| ||||||| |||||
Sbjct: 160 gctactccctccgtttcacaatgtaagtcattctaacatttaccacattcatatt 106
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| |||||||| ||| ||||||||||||| |||||||
Sbjct: 79 tagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacg 138
Query: 127 gagggagta 135
|||||||||
Sbjct: 139 gagggagta 147
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
||||| |||||||| ||| ||| |||| ||| ||||||||||||| |||||| |||||||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaacagagggag 7
Query: 134 ta 135
||
Sbjct: 6 ta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| ||||||||| ||| |||| |||||| |||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatatt 95
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 107/126 (84%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||||||||||||||||||||||||||||| ||| |||||||||||| ||||| | ||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 74 attaat----atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
|| ||| |||||||||||| || |||| | | ||||||||||||| ||||||||||
Sbjct: 70 atgaatctacatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggag 11
Query: 130 ggagta 135
||||||
Sbjct: 10 ggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 107/126 (84%), Gaps = 4/126 (3%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt----tag 69
|||| ||||||||||||||| ||||||||| | | |||||||||||| ||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgtag 64
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| |||||||||||| || |||| ||| ||||||||| ||| ||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggag 124
Query: 130 ggagta 135
| ||||
Sbjct: 125 gaagta 130
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||||| |||||||||||| || |||||| |||||||||||||||| |||||
Sbjct: 75 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 16
Query: 125 cggagggagtag 136
||||| ||||||
Sbjct: 15 cggagagagtag 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 63/74 (85%), Gaps = 7/74 (9%)
Strand = Plus / Plus
Query: 62 atatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatg 121
|||| |||||||||||| ||||||||||| ||||||||||||||||||||| ||
Sbjct: 77 atatctagattcattaacatcaatatgaa-------aatgctagaatgacttacattgtg 129
Query: 122 aaacggagggagta 135
|||||||| |||||
Sbjct: 130 aaacggagagagta 143
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 20 ctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||| |||||||||||| ||||| ||||||| |||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| |||||||||||| || ||||| |||||| |||||| |||||||||||||||| |
Sbjct: 83 tatatctagattcattaacattaatataaatatgggaaatgttagaatgacttacattgt 142
Query: 121 gaaacggagggagtag 136
||||||||||||||||
Sbjct: 143 gaaacggagggagtag 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 73 tagattcattaccatcaatatgaatgtgagaaatgctagaatgacttacattgcgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| |||||||||||| ||||| ||| |||||||||
Sbjct: 158 ctactccctccgtttcacaatgtaagtcattctaacatttcccatatttatatt 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||| |||| |||||||||||||||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatatt 57
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 93.7 bits (47), Expect = 6e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| |||||||||||| || | ||||||| ||| |||||||||||||||||||||| |
Sbjct: 82 tatatctagattcattaacatgagtatgaatgtgaaaaatgctagaatgacttacattgt 141
Query: 121 gaaacggagggagta 135
|||||||||||||||
Sbjct: 142 gaaacggagggagta 156
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacatt 51
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||| ||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacatt 110
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| || | ||||||| || ||||||| ||||||||||| ||| ||||||||||
Sbjct: 70 attcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtgaaacggag 11
Query: 130 ggagta 135
| ||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 93.7 bits (47), Expect = 6e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| ||||| |||||| |||||||||||| || |||||||||||||||||||||| |
Sbjct: 79 tatatctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgt 20
Query: 121 gaaacggagggagta 135
|||||||||||||||
Sbjct: 19 gaaacggagggagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatt 57
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||| |||||| |||||||||||| || ||||||||||||||||||||||| || ||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 127 gagggagta 135
|||| ||||
Sbjct: 138 gaggaagta 146
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||| |||||| |||||||||||||||||| ||||||| |||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatatt 94
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 93.7 bits (47), Expect = 6e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| ||||||||||| |||||||||||| || ||||||||||||||||||||||| |
Sbjct: 79 tatatctagattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgt 20
Query: 121 gaaacggagggagta 135
|||||||||| ||||
Sbjct: 19 gaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||||||||||| | ||||||||||||||||||| ||| |||||||
Sbjct: 84 tagattcattagcatcaatatgaatgtaggaaatgctagaatgacttatattgtgaaacg 143
Query: 127 gagggagtag 136
||||||||||
Sbjct: 144 gagggagtag 153
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| |||||||||||||||||||||||||||||||||| | ||||| |||||
Sbjct: 153 ctactccctccgtttcacaatataagtcattctagcatttcctacattcatatt 100
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 91.7 bits (46), Expect = 2e-18
Identities = 111/133 (83%), Gaps = 11/133 (8%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------- 66
|||||||||||||||||||| |||||||||||||||||| ||| ||| |||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatatct 78
Query: 67 ---tagattcattaatatcaatatgaatatgagaaatgctaga-atgacttacattatga 122
|||||||||||| |||||||||||| || |||||| |||| |||||||||| |||
Sbjct: 77 atctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtga 18
Query: 123 aacggagggagta 135
|||||||||||||
Sbjct: 17 aacggagggagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 78 atatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 80 atatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 58 atttatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacat 117
||||| || ||||||||||| |||||||||||| ||| |||||||||||| ||||||||
Sbjct: 82 atttagatctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacat 23
Query: 118 tatgaaacggagggagta 135
| ||||||||||||||||
Sbjct: 22 tgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| ||||| ||||||||||||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatatt 57
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| ||| ||||| |||||||||| |||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatatt 94
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 97 aaatgctagaatgacttacattatgaaacggagggagta 135
|||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 108 aaatgctaaaatgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 91.7 bits (46), Expect = 2e-18
Identities = 102/123 (82%), Gaps = 12/123 (9%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| ||||||||||||||| |||||||||||||||||| ||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt------------c 52
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 53 attaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaag 112
Query: 134 tag 136
|||
Sbjct: 113 tag 115
Score = 79.8 bits (40), Expect = 9e-15
Identities = 103/123 (83%), Gaps = 12/123 (9%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt 72
||||||||||||||||||||| |||||||||||||||||| | ||||| ||||| |||
Sbjct: 115 ctacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatatt--gatg 58
Query: 73 cattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
||||| |||| || ||||||||||||||||||||||| |||||||||||||
Sbjct: 57 --ttaat--------gaatgtgggaaatgctagaatgacttacattgtgaaacggaggga 8
Query: 133 gta 135
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 58 atttatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacat 117
||||| || ||||||||||| |||||||| ||||||| |||| ||||||||||||||||
Sbjct: 82 atttagatctagattcattagcatcaatataaatatgaaaaatactagaatgacttacat 23
Query: 118 tatgaaacggagggagta 135
| ||||||||||||||||
Sbjct: 22 tgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
|||||||| |||||||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 81 attcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaacggag 140
Query: 130 ggagta 135
||||||
Sbjct: 141 ggagta 146
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| ||||||||||||| ||||| || |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatatt 57
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| ||| |||||||||||||||| ||||| |||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatatt 94
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||| |
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgggg 142
Query: 130 ggagta 135
||||||
Sbjct: 143 ggagta 148
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatatt 57
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| || ||||| ||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacattaatataaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 22 ccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatatt 96
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || | ||||||| ||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggtaatgctataatgacttacattgtgaaacg 14
Query: 127 gagggagtag 136
||||||||||
Sbjct: 13 gagggagtag 4
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 159 ctacttcctccgtttcacaatataagtcattttagcatttcccacattcatatt 106
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| || ||||||||| || ||||||||| ||||||||| ||| |||||||
Sbjct: 90 tagattcattaacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 149
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 150 gaggaagtag 159
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| ||||||||| ||||||| ||||||| |||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagcattacccacattcatatt 57
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 97/114 (85%), Gaps = 4/114 (3%)
Strand = Plus / Minus
Query: 19 cctccgtttcacaatataagtcattctagcattttccacatttata----tttagattca 74
||||||||||||||||||||||||| || |||||| |||||| ||| | ||||||||
Sbjct: 125 cctccgtttcacaatataagtcattttaacatttttcacattcatatctgtctagattca 66
Query: 75 ttaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 128
|||| || ||| | ||||||| |||||||| ||||||||| ||| |||||||||
Sbjct: 65 ttaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacattta 62
|||||| ||||||||||||||||||||||| ||||||||| || |||||
Sbjct: 5 tacttcttccgtttcacaatataagtcattttagcatttttcatattta 53
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
|||||||||||| || ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 83 atcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagtag 139
Score = 67.9 bits (34), Expect = 4e-11
Identities = 108/135 (80%), Gaps = 12/135 (8%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------ 66
||||| ||||||||||| ||| ||||||||| |||||||| ||||||| |||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgtc 80
Query: 67 ------tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||||||||| |||| ||||||| || |||||||||||||||||| |||||
Sbjct: 79 actatctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattat 20
Query: 121 gaaacggagggagta 135
||||| |||| ||||
Sbjct: 19 gaaacagaggaagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||||||| ||| || ||||| ||| ||||||||| ||| |||||||
Sbjct: 90 tagattcattaccatcaatattaatgtgggaaattctaaaatgacttagattgtgaaacg 149
Query: 127 gagggagtag 136
||||||||||
Sbjct: 150 gagggagtag 159
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| ||||||||| ||| |||| ||||||| |||||
Sbjct: 159 ctactccctccgtttcacaatctaagtcattttagaatttcccacattaatatt 106
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| ||| |||||||| |||||||| ||||||||||||
Sbjct: 88 tagattcattaacatctatatgaatgtgaaaaatgctaaaatgacttgcattatgaaacg 147
Query: 127 gagggagta 135
|||||||||
Sbjct: 148 gagggagta 156
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 69 gattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 128
|||||||||| ||| | |||||| || ||||||||| ||||||||||||| |||||||||
Sbjct: 71 gattcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Query: 129 gggagtag 136
|| |||||
Sbjct: 11 ggaagtag 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatt 60
||||||||||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattttagcatttcccacatt 51
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||| ||||||||||| ||| |||||||| ||||||||| |||||| ||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatat 105
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||| ||| || |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 73 tagattcactaacctctatatgaatataggaaatgctagaatgacttacattatgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||| ||| || |||||||| || |||||||||||||||||||||||||||||||
Sbjct: 90 tagattcactaacctccatatgaatgtgggaaatgctagaatgacttacattatgaaacg 149
Query: 127 gagggagt 134
||||||||
Sbjct: 150 gagggagt 157
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 19 cctccgtttcacaatataagtcattctagcattttccacatttatat 65
||||||||||| ||| |||||||||||||||||| ||||||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatat 107
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattt 52
|||| ||||||||||| ||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||||| | |||||||||| | ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| || |||||||| || |||||||||| | ||||||||||||||||
Sbjct: 88 tagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatgaaacg 147
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 148 gaggaagtag 157
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
||||||||||||||||| ||| |||| | |||||||||| |||||||| ||||
Sbjct: 157 ctacttcctccgtttcataatgtaagactttctagcattgtccacattcatat 105
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| | | |||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgttggtaatgctagaatgacttacattatgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 55 cacatttatatttagattcattaatatcaatatgaatatgagaaatgctagaatgactta 114
||||| ||||| || ||||||||| ||| |||| || || | |||||||||||||||||
Sbjct: 78 cacatctatatctaaattcattaacatctatatatatgtgggcaatgctagaatgactta 137
Query: 115 cattatgaaacggagggagta 135
|||||||||||||||| ||||
Sbjct: 138 cattatgaaacggaggaagta 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||| ||| ||||||||||||||||| |||||| |||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatat 107
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||| ||||||||||| ||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatatt 100
Score = 69.9 bits (35), Expect = 9e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| || |||||||| |||||| | ||| |||||||||||| ||||||||||||| |
Sbjct: 79 tatatctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgt 20
Query: 121 gaaacggagggagta 135
|||||||||| ||||
Sbjct: 19 gaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacattta 62
|||||||||||||||||||| ||||||||| |||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacattta 53
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||||||| ||| || |||||||| ||||||||| ||| |||||||
Sbjct: 84 tagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgtgaaacg 143
Query: 127 gagggagta 135
|||||||||
Sbjct: 144 gagggagta 152
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa
Japonica Group
Length = 156
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatatt 57
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 72 tcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
||||||| |||||||||||| || ||| |||||||||||||||||| ||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggg 148
Query: 132 agtagc 137
||||||
Sbjct: 149 agtagc 154
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 154 gctactccctccgtttcacaatgtaagtcattctagccttttccacattcatatt 100
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||||| || |||||||||||||||||||||| ||||||||||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
|||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 57
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 99 atgctagaatgacttacattatgaaacggagggagtag 136
|||||||| ||||||||||| |||||||||||||||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagtag 112
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 109/132 (82%), Gaps = 10/132 (7%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattta----- 68
|||||||||||||||||||| ||||| ||||||| |||| ||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacattcacatttataaat 64
Query: 69 -----gattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
|||| ||||| ||||||||||||||| ||||||||| |||||||| |||| ||||
Sbjct: 65 gtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaa 124
Query: 124 acggagggagta 135
||||||| ||||
Sbjct: 125 acggaggaagta 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| |||||||| |||||||| ||| ||| |||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatatt 84
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 87 tgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||| || ||||| ||||||| ||||||||| ||||||||||| ||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| | |||||||||| || ||||| ||||||||||||||||| |||||||
Sbjct: 90 tagattcattaacaacaatatgaatgtgggaaatactagaatgacttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacat 59
|||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacat 50
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||||||||| || || |||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| ||||||||||||| |||| ||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatatt 106
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 112/137 (81%), Gaps = 13/137 (9%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt 72
||||||||||||||||| |||||||||||||||| ||||||||||||| ||||| | ||
Sbjct: 140 ctacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtt 81
Query: 73 cat-------------taatatcaatatgaatatgagaaatgctagaatgacttacatta 119
|| ||| ||||| || ||| ||| |||||||||||||||||||||||
Sbjct: 80 aatgaatctagacatataacatcaacataaatgtgaaaaatgctagaatgacttacatta 21
Query: 120 tgaaacggagggagtag 136
|||||||||||||||||
Sbjct: 20 tgaaacggagggagtag 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 112/137 (81%), Gaps = 13/137 (9%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------ 66
||||| ||||||||||| ||| ||||||||||||||||||| ||||||||| ||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtt 63
Query: 67 -------tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacatta 119
|||||||||||| |||||||||||| || ||||| |||||||||||| ||||
Sbjct: 64 atatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatta 123
Query: 120 tgaaacggagggagtag 136
||||||||||| |||||
Sbjct: 124 tgaaacggaggaagtag 140
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| |||||||||||| ||| ||||| ||||| | || ||||||||||||||||||||
Sbjct: 79 tatatctagattcattaacatctatatgcatatgggtaaggctagaatgacttacattat 20
Query: 121 gaaacggagggagtag 136
|||||||||| |||||
Sbjct: 19 gaaacggaggaagtag 4
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
||||||||||||| ||| |||||||| || | ||||||| |||||||||||||||||||
Sbjct: 88 tttagattcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatgaaa 147
Query: 125 cggagggagta 135
|||||||||||
Sbjct: 148 cggagggagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagc 48
||||||||||||||||| ||| ||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagc 39
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||| ||||||||||| ||| ||||||||| ||||||| ||||||| ||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatat 107
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttccacaattatat 57
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 96 gaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 44 gaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 97 aaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||||||||||||||| ||||||||||| ||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattt 52
|||| ||||||||||||||| ||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||| ||| ||| ||||| || |||||||||||||||||||| |||||||||
Sbjct: 88 atcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| ||||||||||||| |||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatatt 57
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| |||| |||||| ||| ||||||||| || |||||| ||||||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatatt 91
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatattta 68
||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattgtagcatttcccacattcatattta 59
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatatt 106
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| || ||||||||| || ||||||||| ||||||||| ||| |||||||
Sbjct: 73 tagattcattaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaacg 14
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 13 gaggaagtag 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||||||| ||| ||| ||||||||||||| |||| ||| |||||||
Sbjct: 90 tagattcattatcatcaatataaatgtgaaaaatgctagaatggcttatattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||| ||| ||| ||| |||| || ||||| |||||||||||||||||| |||||
Sbjct: 70 tagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaacg 129
Query: 127 gagggagta 135
|||||||||
Sbjct: 130 gagggagta 138
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatt 51
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||
Sbjct: 90 tagattcattagcatcaatatgaatatagaaaatgctagaatgacttatattgtgaaacg 149
Query: 127 gagggagtag 136
||||||||||
Sbjct: 150 gagggagtag 159
Score = 75.8 bits (38), Expect = 1e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttc 54
||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 159 ctactccctccgtttcacaatataagtcattctagcattttc 118
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||| ||||||| ||||||| |||| || |||||||||||||||||||||| |||||||
Sbjct: 73 tagagtcattaacatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| |||||| ||||| |||| ||||||| || ||||| |||||||||||||||||||
Sbjct: 70 tatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttacattat 129
Query: 121 gaaacggagggagta 135
||||| |||||||||
Sbjct: 130 gaaacagagggagta 144
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
||||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 134 ta 135
||
Sbjct: 6 ta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||| |||| |||||| ||| ||||||||||||| |||| |||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacatt 98
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| ||||||||||||| |||||||||| |||||| ||||||||||
Sbjct: 73 tagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaaca 14
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 13 gaggaagtag 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||| ||||||||||| | |||||||||| | |||| |||||||||||
Sbjct: 72 tagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaacg 131
Query: 127 gagggagta 135
|||||||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 72 tcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
||||||| ||| |||||||| || |||||||||||||||||||||| ||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 132 agtagc 137
||||||
Sbjct: 8 agtagc 3
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||| ||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 56
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatatt 100
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||
Sbjct: 97 atcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 83.8 bits (42), Expect = 6e-16
Identities = 106/127 (83%), Gaps = 4/127 (3%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagatt 72
||||| |||||||||||| || ||||||| |||| ||||||||||||| ||||| | ||
Sbjct: 131 ctactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtt 72
Query: 73 cattaat----atcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 128
|| ||| || ||||||||||||||||||||| | |||||| |||| |||||||||
Sbjct: 71 aatgaatctagatatatatgaatatgagaaatgctaaattgactttcattgtgaaacgga 12
Query: 129 gggagta 135
|||||||
Sbjct: 11 gggagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 106/127 (83%), Gaps = 4/127 (3%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt----tatatttag 69
|||| ||||||||||||||| |||||| | |||||||| || ||| ||||| |||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatatatatctag 64
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| |||||||||||| || ||||| |||| |||||||||| ||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaacggag 124
Query: 130 ggagtag 136
|||||||
Sbjct: 125 ggagtag 131
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 83.8 bits (42), Expect = 6e-16
Identities = 107/129 (82%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------ 66
||||||||||||||||| ||| ||||||||||||||||| ||| || ||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattacccatatgcatatagacgtc 63
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| ||||| || || | ||||||||||||| ||||||||||||||
Sbjct: 64 tagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaaca 123
Query: 127 gagggagta 135
|||||||||
Sbjct: 124 gagggagta 132
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
||||| ||||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 140 ctactccctccgtttcacaatgtaagtcattctagcattttccacaattatatt 87
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||| ||||| |||||||| | | || |||||||||||||||||||||| |||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 127 gagggagtag 136
||||||||||
Sbjct: 131 gagggagtag 140
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
|||||| || |||||||||||| || |||||||||||||| |||||||| ||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 130 ggagta 135
||||||
Sbjct: 10 ggagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||| || || |||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 76 tagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 135
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 136 gaggaagtag 145
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 145 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 92
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||||| ||||||||||||| |||| |||||||||||||
Sbjct: 152 ctacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatatt 99
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 71 ttcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagg 130
|||||||| |||||||| ||| || ||||| ||||||||||||||||| |||||||||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 131 gagtag 136
|||||
Sbjct: 147 aagtag 152
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 71 ttcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagg 130
|||||||| |||||||||||| || ||||| |||||||||||| ||| |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 131 gagta 135
|||||
Sbjct: 9 gagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| |||||||||||||||||||||||||||| |||| ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 71 ttcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagg 130
|||||||| |||||||||||| || |||||||||||||||||| |||| |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 131 gagtag 136
|||||
Sbjct: 9 aagtag 4
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||||| ||||||||||||||||| ||||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 83.8 bits (42), Expect = 6e-16
Identities = 111/135 (82%), Gaps = 13/135 (9%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt-----ta 68
|||| ||||| ||||| |||||||||||||||||||||||||| ||||||||| |
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgatgctt 80
Query: 69 gattcattaatatcaatatgaata--------tgagaaatgctagaatgacttacattat 120
||||||||| |||||||| |||| || |||| |||||||||||||||||||
Sbjct: 79 aattcattaacatcaatataaatatattgatgtggaaaatactagaatgacttacattat 20
Query: 121 gaaacggagggagta 135
|||||||||||||||
Sbjct: 19 gaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||| |||||| |||||||||||||||||| ||||||||| ||||||||||
Sbjct: 84 atcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatatt 57
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 73 cattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggga 132
|||||| || ||||| ||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 133 gtag 136
||||
Sbjct: 7 gtag 4
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 98 aatgctagaatgacttacattatgaaacggagggagtag 136
||||||||||||||||||||| || |||||| |||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagtag 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 21 tccgtttcacaatataagtcattctagcatt 51
|||||| |||||| |||||||||||||||||
Sbjct: 94 tccgttccacaatgtaagtcattctagcatt 64
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| || ||||||||| || ||||||||||||||||||||| |||||||
Sbjct: 90 tagattcattaacattaatatgaatgtggagaatgctagaatgacttacattgtgaaacg 149
Query: 127 gagggagtag 136
||||||||||
Sbjct: 150 gagggagtag 159
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcattctccacattcatatt 106
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| | ||||||||| || ||||||||| ||||||||||||| |||||||
Sbjct: 73 tagattcattaacactaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| ||||||||| |||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||||||||| ||||||| |||||||| ||||| ||||||| ||||| |
Sbjct: 38 tagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaatg 97
Query: 127 gagggagta 135
|||||||||
Sbjct: 98 gagggagta 106
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcatt 43
|||||||||||||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 106 aatgacttacattatgaaacggagggagta 135
||||||||||||| ||||||||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| || | |||||||||| ||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 98 aatgctagaatgacttacattatgaaacggagggagta 135
|||||||||| | |||||||||||||||||||||||||
Sbjct: 85 aatgctagaaagtcttacattatgaaacggagggagta 122
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||| ||| |||||| |||||||||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatat 56
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 81.8 bits (41), Expect = 2e-15
Identities = 102/124 (82%), Gaps = 10/124 (8%)
Strand = Plus / Plus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagat 71
|||||| ||||||||||||||| ||||||||| ||| ||||| |||||| ||||| |
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattga--- 59
Query: 72 tcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
| ||||||||||| ||| |||| ||||||||||||||||||||||| ||||||
Sbjct: 60 -------tgtcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggaggg 112
Query: 132 agta 135
||||
Sbjct: 113 agta 116
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtagc 137
|||||||||||| ||| |||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagtagc 3
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| || | |||||||||| ||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| | |||||||| || ||||||| || | ||||||||||||||||
Sbjct: 88 tagattcattaacatctagatgaatataagcaatgctacaaagtcttacattatgaaacg 147
Query: 127 gagggagta 135
|||||||||
Sbjct: 148 gagggagta 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||| ||| |||||| |||||||||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatat 56
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| || | ||||||||||||||||||||||||||| |
Sbjct: 64 tagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaatg 123
Query: 127 gagggagta 135
|||| ||||
Sbjct: 124 gaggaagta 132
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||||||||||| || ||||||||| ||||||||||||| |||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| ||||||||| |||||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 80 atcaatatgaatatgagaaatgctaga-atgacttacattatgaaacggagggagtag 136
|||||||||||| || ||||||||| | |||||||||||| |||||||||||||||||
Sbjct: 87 atcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagtag 144
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
||||||||||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 60 atcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||||||| |||||||||||||||||| |||| || |||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatatt 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 96 gaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||| ||||||| | ||||||||||||||
Sbjct: 68 gaaatgctagaatgatttacattgtaaaacggagggagta 107
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccaca 58
|||| ||||||||| ||||| ||| |||||||||||||| |||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||| ||| |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||||||||| || ||| ||| ||||||||||||||||||||||||
Sbjct: 90 tagattcattagcatcaatatggatgtgaacaatagtagaatgacttacattatgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||| ||||||||||| ||| |||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatat 56
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 3 gctacttcctccgtttcacaatgtaagtcattctagcactttccacatt 51
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 100 tgctagaatgacttacattatgaaacggagggagtagc 137
||||||||||||||||||| ||||||||||| ||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtagc 3
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctag 47
|||| ||||||| ||| |||||||||||||||||
Sbjct: 85 tactacctccgtctcataatataagtcattctag 52
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 102 ctagaatgacttacattatgaaacggagggagta 135
||||||||||||| ||||||| ||||||| ||||
Sbjct: 52 ctagaatgacttatattatgagacggaggtagta 85
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||||||| || |||| |||||||||||||||| |||||||
Sbjct: 89 tagattcattaacatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacg 148
Query: 127 gagggagta 135
|||||||||
Sbjct: 149 gagggagta 157
Score = 73.8 bits (37), Expect = 6e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||||||||||||||||| || |||| ||||||| ||||||||| | |||||
Sbjct: 72 tagattcattaatatcaatatgaatgtgggaaa-actagaataacttacattgtaaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||| |||||||||||| |||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatatt 105
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| | | |||||||| || |||||||||||||||||||||| |||||||
Sbjct: 90 tagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 79.8 bits (40), Expect = 9e-15
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| |||||||||||| | | |||||||| || |||||| ||||||||||||||||||
Sbjct: 79 tatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattat 20
Query: 121 gaaacggagggagtag 136
| |||||| |||||||
Sbjct: 19 ggaacggaaggagtag 4
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||| ||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 107
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||||||||||| || ||||||||| ||||||||||||| |||||||
Sbjct: 75 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 134
Query: 127 gagggagta 135
|||| ||||
Sbjct: 135 gaggaagta 143
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| ||||||||| |||||||| ||||||| |||||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 91
Score = 67.9 bits (34), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 80 atcaatatgaatatgagaaatgctaga-atgacttacattatgaaacggagggagtag 136
|||||||||||| || ||||||||| | |||||||||||| |||||||||||||||||
Sbjct: 61 atcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||||||||||||| || ||||| ||||||||||||| ||| |||||||
Sbjct: 73 tagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||||||||||||||||| |||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatatt 57
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
|||||||||||| || |||||| | ||||||||||||||||||||||||||||||||
Sbjct: 100 atcaatatgaatgtgggaaatggtggaatgacttacattatgaaacggagggagtag 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||| ||||||||||| ||| |||||||||| | ||||| ||||||| |||||
Sbjct: 156 ctactccctccgtttcataatgtaagtcattccaccatttcccacattcatatt 103
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatatt 41
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||| ||| |||||||||||||||||||||| ||| | ||||||||| ||||
Sbjct: 38 atcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagta 93
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 ctccgtttcacaatataagtcatt 43
||||||||||||||||||||||||
Sbjct: 11 ctccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||| ||| |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||||||||
Sbjct: 90 tagattcattagcatcgatatggatgtgaaaaatactagaatgacttacattatgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||| ||||||||||| ||| |||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacat 59
|||| ||||||||||| ||| ||||||||||||| ||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacat 113
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| |||| ||||||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| || | |||||||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 149
Query: 127 gagggagta 135
|||| ||||
Sbjct: 150 gaggaagta 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||| ||| |||| | |||||||||| ||||||| ||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatat 107
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| ||||||||||||||||||| ||| ||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatatt 79
Score = 77.8 bits (39), Expect = 4e-14
Identities = 105/127 (82%), Gaps = 5/127 (3%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttag---- 69
|||| ||||||||||||||| ||||||||| |||||||||| || | ||| | |
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttctactctcataatgaatatg 64
Query: 70 -attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 128
||||||||| |||||||| || ||| |||||||||||||||||||||| |||||||||
Sbjct: 65 aattcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacgga 124
Query: 129 gggagta 135
|| ||||
Sbjct: 125 ggaagta 131
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| || | |||||||||| | ||||||||||||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 127 gagggagta 135
|||||||||
Sbjct: 132 gagggagta 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 73 cattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgga 128
|||||| ||| |||||||| | | |||||||||| | ||||||||||||||||||
Sbjct: 67 cattaacatctatatgaatgtaggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| |||| ||||||| || | ||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| || | |||||||||| | ||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||| ||| |||| | |||||||||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatat 56
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||| ||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 107
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||| |||||||| ||| |||||||| || |||||||||||||||||||||| |||||
Sbjct: 88 tttaaattcattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaa 147
Query: 125 cggagggagta 135
|||||||||||
Sbjct: 148 cggagggagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||| |||||||||| ||||| |||||||||||||||| |||||||
Sbjct: 73 tagattcattagcatctatatgaatatagaaaatgttagaatgacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttc 54
|||| ||||||||||||||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttc 45
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 79.8 bits (40), Expect = 9e-15
Identities = 102/123 (82%), Gaps = 6/123 (4%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattta----- 68
||||| ||| |||||||||| |||||||||||||||||| || |||| |||| ||
Sbjct: 5 tactttctctgtttcacaatgtaagtcattctagcatttcccgcattcatatatatgtct 64
Query: 69 -gattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgg 127
||||||||| ||||||||||||| | |||||||| ||||||||| ||| ||||||||
Sbjct: 65 agattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacgg 124
Query: 128 agg 130
|||
Sbjct: 125 agg 127
Score = 73.8 bits (37), Expect = 6e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 15 acttcctccgtttcacaatataagtcattctagcattttcc 55
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttcc 91
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 79.8 bits (40), Expect = 9e-15
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatt 60
||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 96 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacatt 49
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 85 tatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
||||||| || ||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtag 96
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 95 agaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||||||||||||||||| |||||| |||||||||
Sbjct: 45 agaaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattt 52
|||| |||| |||||||||| ||||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||| ||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttata 64
|||| ||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 96 gaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 22 ccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 96 gaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 110 gaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 96 gaaatgctagaatgacttacattatgaaacgg 127
||||||||||||||||||||||| ||||||||
Sbjct: 67 gaaatgctagaatgacttacattgtgaaacgg 98
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 97 aaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||||||||||||||| ||||||||||||||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 88 gaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
||||||| ||||||||||||||||| |||| |||||||||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagtag 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttcca 56
||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgcaagtcattctagcattttcca 47
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacatt 51
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattt 52
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 140 ctacttcctccgtttcacaatataagtcattctaggattt 101
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 97 aaatgctagaatgacttacattatgaaacggagggagta 135
|||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
|||||||||||||||||| ||| ||||| ||||| |||||||||| | |||||||| |
Sbjct: 84 tatatttagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgt 143
Query: 121 gaaacggagggagta 135
|||||||||||||||
Sbjct: 144 gaaacggagggagta 158
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||||||||||||||||||| |||| | |||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacatt 51
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| | | | |||||| || | |||||||||| | |||||||| |||||||
Sbjct: 73 tagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttcca 56
|||| ||||||||||||||| |||| | |||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtcca 116
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||||| || ||||| ||||||| |||||||||| | |||||||| |||||
Sbjct: 75 tttagattcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaa 16
Query: 125 cggagggagta 135
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| | ||||||||| | ||||||| || | |||||||| |||||||
Sbjct: 90 tagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtgaaacg 149
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 150 gaggaagtag 159
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcatt 51
||||||||||||||||||||| |||| | || |||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagactttttagcatt 121
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||| ||||||||||||||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcatt 42
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttata 64
|||| ||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattttccacctttata 55
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 95 agaaatgctagaatgacttacattatgaaacggagggagtagc 137
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 106 agaaatgctagaatgacttacattatgaaacgaagggagtagc 148
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 97 aaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattt 52
|||||| ||| ||||||| ||| ||||||||||||||||||
Sbjct: 148 gctactcccttcgtttcataatgtaagtcattctagcattt 108
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 95 agaaatgctagaatgacttaca 116
||||||||||||||||||||||
Sbjct: 90 agaaatgctagaatgacttaca 69
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgactt 113
|||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 47 tagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgactt 113
|||||||||||| |||||||||||| || ||||||||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 36 aagtcattctagcattttccacatttatatt 66
||||||||||||||||| ||||||| |||||
Sbjct: 110 aagtcattctagcatttcccacattcatatt 80
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 68 agattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgg 127
||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||||||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaatgctagaatgacttatattatgaaacgg 13
Query: 128 agg 130
|||
Sbjct: 12 agg 10
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||| ||| |||| || | ||| ||||||||||||| ||| |||||||
Sbjct: 88 tagattcattagtatctataagaatgtgggcaatcctagaatgacttatattgtgaaacg 147
Query: 127 gagggagtagc 137
|||||||||||
Sbjct: 148 gagggagtagc 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 17 ttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
||||||||||||| ||||||||||||||||||||| ||||||| ||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatat 56
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||||| ||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 158 gctactccctccgtttcacaatataagtcattctaggattgcccacatt 110
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 63 tatttagattcattaatatcaatatgaatatgagaaatgctagaatgactt 113
|||||||||||||||| |||||||||||| || ||||||||||||||||||
Sbjct: 60 tatttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgactt 113
|||||||||||| |||||||||||| || ||||||||||||||||||
Sbjct: 47 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 36 aagtcattctagcattttccacatttatatt 66
||||||||||||||||| ||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatatt 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 36 aagtcattctagcattttccacatttatatt 66
||||||||||||||||| ||||||| |||||
Sbjct: 110 aagtcattctagcatttcccacattcatatt 80
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| ||| |||||||| || | |||||||||| | |||||||||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 130 ggagta 135
||||||
Sbjct: 10 ggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||| || | |||||||||| | |||||||||||||||||||||||||
Sbjct: 91 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 75.8 bits (38), Expect = 1e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| ||||||||| || ||| |||||||||||||||||||||| ||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 130 ggagta 135
| ||||
Sbjct: 10 gaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttc 54
|||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttc 45
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 97 aaatgctagaatgacttacattatgaaacggaggg 131
|||||||||||||||||||||| ||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggaggg 108
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| |||| |||||||| | | |||||||| |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacg 14
Query: 127 gagggagtag 136
||||||||||
Sbjct: 13 gagggagtag 4
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 55 cacatttatatttagattcattaatatcaatatgaatatgagaaatgctagaatgactta 114
||||| ||||| |||||||||||| ||| || ||||| || | |||| || || | ||||
Sbjct: 78 cacatatatatctagattcattaacatctatgtgaatgtgggcaatgttaaaaagtctta 137
Query: 115 cattatgaaacggagggagtag 136
|||| |||||||||||||||||
Sbjct: 138 cattgtgaaacggagggagtag 159
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 86 atgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||| |||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattt 52
|||| ||||||||||||||| ||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcattt 43
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacatt 118
|||||||| |||||||||||| || ||||||||| |||||||| ||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcatt 97
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 1e-13
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatttagattc 73
|||| ||||||||||| | |||||| |||||||||| ||||||| || | |||||||
Sbjct: 5 tactccctccgtttcatattataagattttctagcattgcccacattcatgtctagattc 64
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
||||| ||| |||||||| || | |||||||||| | |||| | ||||||||||||| ||
Sbjct: 65 attaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaag 124
Query: 134 ta 135
||
Sbjct: 125 ta 126
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||| | |||||| | |||||||||| ||||||| ||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatat 75
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttat 63
||||| ||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 89 tacttactccgtttcacaatataagtcattctagcattttctatatttat 40
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcat 50
|||||||||||||||||| | ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacagtgtaagtcattctagcat 41
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 99 atgctagaatgacttacattatgaaacggagggagta 135
|||||||||||||||||| | ||||||||||| ||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 97 aaatgctagaatgacttacattatgaaacggag 129
|||||||||||||||||| ||| ||||||||||
Sbjct: 51 aaatgctagaatgacttatattgtgaaacggag 83
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 58 atttatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacat 117
|||| ||| |||||||||||| |||||||| ||| || ||||||||| |||||||||| |
Sbjct: 81 atttctatctagattcattaacatcaatataaatgtgggaaatgctaaaatgacttactt 140
Query: 118 tatgaaacggagggagta 135
| ||||||||||| ||||
Sbjct: 141 tgtgaaacggaggaagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
||||||||||||||||||| ||||||||| |||||||| |||||||||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatatt 106
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||| || |||||||| ||| || ||||||| | |||||||||| || |||||||
Sbjct: 73 tagattcataaacatcaatataaatgtgggaaatgcaaaaatgacttactttgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| |||||||||||||| ||||||||| | |||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatatt 57
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| |||||||||||| ||||| ||||||||||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatatt 56
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
|||||||||||||| ||| ||| |||| |||||||||||| |||| ||||||||||| ||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 134 ta 135
||
Sbjct: 107 ta 108
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 103 tagaatgacttacattatgaaacggagggagta 135
|||||||||||||||| ||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattcta 46
|||| ||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||| ||||| ||| |||||||| || ||||||||||| |||||||||||||||||
Sbjct: 69 tagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaacg 128
Query: 127 gagggagta 135
|||||||||
Sbjct: 129 gagggagta 137
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 98 aatgctagaatgacttacattatgaaacggagggagtag 136
||||||||||| ||||||||||||||||||||| |||||
Sbjct: 42 aatgctagaataacttacattatgaaacggaggaagtag 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||| ||||||||||| ||| ||||| ||||||||||| |||||||| ||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatat 86
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| |||||||||||||||||| |||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatatt 57
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 96 gaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcatt 51
||||||| |||||||||||||||||||||||||||||||
Sbjct: 105 ctacttcttccgtttcacaatataagtcattctagcatt 67
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 98 aatgctagaatgacttacattatgaaacgga 128
||||||||||||||||| ||| |||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacgga 97
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacatt 118
|||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgactta 114
||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 57 tagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 31 aatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||||| |||||| |||||
Sbjct: 108 aatataagtcattctagcatttctcacattcatatt 73
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| |||||||| | | || |||||||||||| ||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| ||||| |||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatatt 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 107 atgacttacattatgaaacggagggagtag 136
|||||||||||| |||||||||||||||||
Sbjct: 98 atgacttacattgtgaaacggagggagtag 127
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| ||||||||||| | ||| |||||| | |||||||| |||||||
Sbjct: 90 tagattcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| ||| ||||||||||| | | | |||||| | ||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatatgggcagtactagaaagtcttacatggtgaaacggag 11
Query: 130 ggagta 135
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 73.8 bits (37), Expect = 6e-13
Identities = 105/128 (82%), Gaps = 6/128 (4%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt------t 67
|||||||||| ||||| ||| |||| | |||||||||| |||||||| |||| |
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgtct 64
Query: 68 agattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacgg 127
||||||||||| ||| |||||||| || |||||||||| | ||||||||||||||| |
Sbjct: 65 agattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacag 124
Query: 128 agggagta 135
||||||||
Sbjct: 125 agggagta 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 98 aatgctagaatgacttacattatgaaacggagggagta 135
|||||||||| | |||||||||||||| ||||| ||||
Sbjct: 42 aatgctagaaagtcttacattatgaaaaggaggaagta 5
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 55 cacatttatatttagattcattaatatcaatatgaatatgagaaatgctagaatgactta 114
||||| ||| |||||||||||| ||||| |||||||| || | ||||||| || | ||||
Sbjct: 78 cacatatatgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtctta 137
Query: 115 cattatgaaacggagggagta 135
||||||||||| |||||||||
Sbjct: 138 cattatgaaaccgagggagta 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| || |||||||| || | || ||||||| | |||||||||||||||
Sbjct: 73 tagattcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatgaaacc 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| ||||| || || | |||||||||| | ||||||||||||||||
Sbjct: 79 tagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaacg 138
Query: 127 gagggagta 135
|||||||||
Sbjct: 139 gagggagta 147
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| | ||||| |||| |||||||||| | |||||||| |||||||
Sbjct: 73 tagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaacg 14
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 13 gaggaagtag 4
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcatt 51
||||||||||||||||||||| |||| | ||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcatt 42
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| ||||||||| ||| |||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 74 attaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggag 133
||||| |||||||||||| || |||| ||| ||||||||||||| ||||||||||| ||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 134 ta 135
||
Sbjct: 6 ta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 106 aatgacttacattatgaaacggagggagta 135
|||| |||||||| ||||||||||||||||
Sbjct: 81 aatggcttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 96 gaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacat 59
|||| ||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 98 aatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||| ||||||| ||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||| ||||||||||||||| ||| |||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 80 atcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||| ||||||| |||||||||||||| ||||||| ||||||||||||||||
Sbjct: 49 atcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacat 59
|||| ||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtatttttcacat 50
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||| ||||||||||||||| ||| ||||||||||||||| || |||| ||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttttcatatttctatt 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 97 aaatgctagaatgacttacattatgaaacggagggagta 135
|||| ||||||||||||| ||| ||||||| ||||||||
Sbjct: 43 aaatactagaatgacttatattgtgaaacgaagggagta 5
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||||| ||| ||||| || |||| |||||||||| | |||||||| |||||
Sbjct: 88 tttagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaa 147
Query: 125 cggagggagta 135
|||||| ||||
Sbjct: 148 cggaggaagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||||||||||||||||||| |||| | ||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcatt 121
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| ||| |||||||| ||| ||||||||||| | ||| |||||| | |||| |||||
Sbjct: 79 tatatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattat 20
Query: 121 gaaacggagggagta 135
|||||||||||||||
Sbjct: 19 gaaacggagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| || ||| ||| || | |||||||| |||||||
Sbjct: 90 tagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttata 64
||||| |||||||||||||| |||||||||||||||||| | |||||||||
Sbjct: 89 tacttactccgtttcacaatgtaagtcattctagcatttcctacatttata 39
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctag 47
|||||||||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 96 gaaatgctagaatgacttacattatgaaacggag 129
||||||||||||||||||||||| ||||||||||
Sbjct: 50 gaaatgctagaatgacttacattgtgaaacggag 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 102 ctagaatgacttacattatgaaacggagggagta 135
||||||||||||||||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||| ||||||||| ||| ||||| ||||||| ||||||| |||| |||||||| |||||
Sbjct: 67 tttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaa 126
Query: 125 cggagggagta 135
|||||| ||||
Sbjct: 127 cggaggaagta 137
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
||||| ||||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 56 atatgtatatgagcaatgctataaagtattacattatgaaacggagggagtag 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||||||||||||||||||| |||| |||| |||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcatt 100
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattt 52
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 96 gaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 93 tgagaaatgctagaatgacttacattatgaaacggagggagtag 136
|||||||||||| ||||||||| ||||||||||||| |||||||
Sbjct: 49 tgagaaatgctaaaatgacttatattatgaaacggatggagtag 92
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 21 tccgtttcacaatataagtcattctagcattt 52
||||||||| ||||||||||||| ||||||||
Sbjct: 84 tccgtttcataatataagtcattttagcattt 53
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||| ||||||||| ||| ||||| ||||||| ||||||| |||| |||||||| |||||
Sbjct: 75 tttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaa 16
Query: 125 cggagggagta 135
|||||| ||||
Sbjct: 15 cggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
||||| ||||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 86 atatgtatatgagcaatgctataaagtattacattatgaaacggagggagtag 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||||||||||||||||||| |||| |||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcatt 42
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||| ||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacatt 51
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 93 tgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 84 tgagaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattt 52
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcattt 88
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 93 tgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 41 tgagcaatgctagaaagacttacattatgaaacggagggagta 83
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 101 gctagaatgacttacattatgaaacggagggagta 135
||||||| |||||||||||||||||||||| ||||
Sbjct: 39 gctagaaagacttacattatgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagc 48
|||||||||||||||| ||| |||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagc 39
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||| ||||||||||| ||| |||||| ||||||||||
Sbjct: 83 tactccctccgtttcataatgtaagtctttctagcatt 46
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| ||| |||||||| ||| ||||||||||| | ||| |||||| | |||| |||||
Sbjct: 84 tatatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattat 143
Query: 121 gaaacggagggagta 135
|||||||||||||||
Sbjct: 144 gaaacggagggagta 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| || ||| ||| || | |||||||| |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacat 59
||||||||||||| |||||| |||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 101 gctagaatgacttacattatgaaacggagggagta 135
|||||||||||||||||| ||||||||||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 96 gaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||||||||||||||| || |||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagc 48
|||| ||||||||||||||| ||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 107/133 (80%), Gaps = 10/133 (7%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt----------tat 63
||||||||||||||||||||||||| | || | ||||| |||||||| |||
Sbjct: 5 tacttcctccgtttcacaatataagactttttggcattgtccacattaacatatacatat 64
Query: 64 atttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
|||||||||||||| ||| ||||| || || | |||||||||| | |||| ||| ||||
Sbjct: 65 gtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaa 124
Query: 124 acggagggagtag 136
|||||||||||||
Sbjct: 125 acggagggagtag 137
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcatt 51
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcatt 99
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 107/133 (80%), Gaps = 10/133 (7%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt----------tat 63
||||||||||||||||||||||||| | || | ||||| |||||||| |||
Sbjct: 136 tacttcctccgtttcacaatataagactttttggcattgtccacattaacatatacatat 77
Query: 64 atttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaa 123
|||||||||||||| ||| ||||| || || | |||||||||| | |||| ||| ||||
Sbjct: 76 gtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaa 17
Query: 124 acggagggagtag 136
|||||||||||||
Sbjct: 16 acggagggagtag 4
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcatt 51
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcatt 42
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||| |||| ||| ||||||||||| |||||||||| | ||||||||||||||||
Sbjct: 73 tagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatgaaacg 14
Query: 127 gaggga 132
||||||
Sbjct: 13 gaggga 8
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 111 cttacattatgaaacggagggagtag 136
|||||||||||||||||||| |||||
Sbjct: 84 cttacattatgaaacggaggaagtag 109
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 104/127 (81%), Gaps = 4/127 (3%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatattt----ag 69
|||||||||| ||||| ||| |||| | |||||||||| ||||||| |||| | ||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatatgtttctag 71
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| ||| ||| ||| || | |||||||||| | ||||||||||||||| |||
Sbjct: 70 attcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaactgag 11
Query: 130 ggagtag 136
|||||||
Sbjct: 10 ggagtag 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||| || | |||||||||| | |||||||||||||| ||||| ||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||| |||||| |||||||||| | ||||||||||||||||
Sbjct: 69 tagattcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaacg 128
Query: 127 gagggagta 135
||| |||||
Sbjct: 129 gagagagta 137
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 98 aatgctagaatgacttacattatgaaacggag 129
|||||||||| | |||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattatgaaacggag 11
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| || |||||||| || | |||||||||| | ||||||||||||||||
Sbjct: 90 tagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| |||| |||| ||| || | || ||||||| | |||||||||||||||
Sbjct: 73 tagattcattagtatctatataaatgtgggcaacgctagaaagtcttacattatgaaaca 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| ||||||||| ||| |||| ||||||| |||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 83 aatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||| || ||||| ||| ||||||||||||| ||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 106 aatgacttacattatgaaacggagggagta 135
||||||||||||| ||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcatt 43
|||| ||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| || | ||| |||||| | |||||||| |||||||
Sbjct: 90 tagattcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| ||| ||||||||||| | | | |||||| | |||||||| ||||||||||
Sbjct: 70 attcattaacatctatatgaatatgggcagtactagaaagtcttacattgtgaaacggag 11
Query: 130 ggagta 135
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| | | |||||||||| | |||||||| |||||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||| || ||||| || | |||||||||| | ||||||||||||||||
Sbjct: 73 tagattcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatgaaacg 14
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 13 gaggaagtag 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatt 60
||||||||||||||||| ||| |||| | |||||||||| |||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagactttctagcattgcccacatt 51
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||| ||||||||||||||| |||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcatt 121
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 55 cacatttatatttagattcattaatatcaatatgaatatgagaaatgctagaatgactta 114
||||| ||||| |||||||||||| ||| |||||||| || | |||||||||| | ||||
Sbjct: 85 cacatatatatatagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 26
Query: 115 cattatgaaacggagggagta 135
| ||||||||||||| ||||
Sbjct: 25 taatatgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| |||||||| || | |||||||||| | |||| | |||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 151
Query: 127 gagggagta 135
|||||||||
Sbjct: 152 gagggagta 160
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||| | |||||| | |||||||||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatat 56
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| | ||||||||| | |||||||||| | |||||||| |||||||
Sbjct: 73 tagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 63 tatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatga 122
|||||||||||||||| ||| ||||| | || | ||| |||||| | |||||||| |||
Sbjct: 86 tatttagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtga 145
Query: 123 aacggagggagta 135
|||||||||||||
Sbjct: 146 aacggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||||||||||||||||||| |||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcatt 42
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 136
||||||||||||| |||||||||| | |||||||| | |||||||||||||||
Sbjct: 57 atatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagtag 109
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
|||||||| || | |||||||||| | |||||||||||||||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||| ||| |||||||| || | ||||||| || | ||||||||||||||||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaacggag 136
Query: 130 ggagta 135
||||||
Sbjct: 137 ggagta 142
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||| | |||||| | |||||||||| |||||||||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattatccacatttatat 63
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||||||||||||||||||| |||| | |||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacatt 51
Score = 50.1 bits (25), Expect = 8e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||||||||| ||| | |||||| || |||||||||| | |||||||| |||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacg 14
Query: 127 gagggagta 135
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||||| ||| | |||||| || | |||||||||| | |||||||| |||||
Sbjct: 75 tttagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaa 16
Query: 125 cggagggagta 135
| |||||||||
Sbjct: 15 cagagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/73 (84%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 65 tttagattcattaa--tatcaatatgaatatgagaaatgctagaatgacttacattatga 122
|||||||||||||| ||| ||||| || |||| ||||||| || | |||||||| |||
Sbjct: 88 tttagattcattaacatatatatatgtatgtgagcaatgctaaaaagtcttacattgtga 147
Query: 123 aacggagggagta 135
|||||||||||||
Sbjct: 148 aacggagggagta 160
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgactt 113
||||| |||||| |||||||||||| || ||||||||||||||||||
Sbjct: 47 tagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgactt 113
||||| |||||| |||||||||||| || ||||||||||||||||||
Sbjct: 77 tagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 36 aagtcattctagcattttccacatttatatt 66
||||||||||||||||| ||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatatt 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 36 aagtcattctagcattttccacatttatatt 66
||||||||||||||||| ||||||| |||||
Sbjct: 123 aagtcattctagcatttcccacattcatatt 93
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||||| ||| |||||||| || || |||||| | ||||||||||||||
Sbjct: 88 tttagattcattaacatctatatgaatgtggacaaacctagaaagtcttacattatgaaa 147
Query: 125 cggagggagta 135
|||||||||||
Sbjct: 148 cggagggagta 158
Score = 60.0 bits (30), Expect = 9e-09
Identities = 62/70 (88%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgaga-aatgctagaatgacttacattatgaaac 125
|||||||||||| ||| |||||||| | ||| |||||||||| | |||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgt-agacaatgctagaaagtcttacattatgaaac 15
Query: 126 ggagggagta 135
||||| ||||
Sbjct: 14 ggaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||| ||| |||| | |||||||||| || ||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatat 56
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| |||||||||||| ||| |||||||| || | |||||||||| | |||| | | |
Sbjct: 85 tatatctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatct 144
Query: 121 gaaacggagggagta 135
|||||||||||||||
Sbjct: 145 gaaacggagggagta 159
Score = 50.1 bits (25), Expect = 8e-06
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 75 ttaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagt 134
|||| ||| |||||||| || | |||||||||| | |||| | |||||||||||||||||
Sbjct: 65 ttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagt 6
Query: 135 a 135
|
Sbjct: 5 a 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttat 63
||||||||||||||||||||| |||| | || ||||||| |||||||||||
Sbjct: 157 ctacttcctccgtttcacaatgtaagactttttagcattgtccacatttat 107
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 98 aatgctagaatgacttacattatgaaacggagggagta 135
|||| ||||| | |||||||||||||||||||||||||
Sbjct: 42 aatggtagaaagtcttacattatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| |||||||||||||||| | || ||| || ||||||| || | |||||||| |
Sbjct: 82 tatatctagattcattaatatctaaataaatgtggacaatgctaaaaagtcttacattgt 141
Query: 121 gaaacggagggagtag 136
|||||||||| |||||
Sbjct: 142 gaaacggaggaagtag 157
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||||| ||| | |||||| || | |||||||||| | ||| ||||||||||
Sbjct: 75 tttagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaa 16
Query: 125 cggagggagta 135
|||||| ||||
Sbjct: 15 cggaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 98 aatgctagaatgacttacattatgaaacggagggagtagc 137
|||| ||||| | |||||||| ||||||||||||||||||
Sbjct: 121 aatgttagaaagtcttacattgtgaaacggagggagtagc 160
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 60.0 bits (30), Expect = 9e-09
Identities = 102/125 (81%), Gaps = 2/125 (1%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacattt--atatttagat 71
|||||||||| ||||| | |||||| | |||||||||| |||| || | || | |||||
Sbjct: 128 tacttcctccttttcatattataagactttctagcattgtccatatattcatgtctagat 69
Query: 72 tcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
||||||| | |||||||| || | |||||||||| | |||| | ||||||||||||||
Sbjct: 68 tcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggg 9
Query: 132 agtag 136
|||||
Sbjct: 8 agtag 4
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||| |||| ||| |||||||| || |||||||||| | ||||||||||||||||
Sbjct: 40 tagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacg 99
Query: 127 gaggga 132
||||||
Sbjct: 100 gaggga 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 19 cctccgtttcacaatataagtcattctagcattttccacatttatat 65
||||||||||| ||| |||| | |||||||||| |||||||| ||||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatat 57
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 111 cttacattatgaaacggagggagtag 136
|||||||||||||||||||| |||||
Sbjct: 29 cttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||| ||||| ||| |||||||| || |||||||||| | |||||||| |||||||
Sbjct: 72 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacg 131
Query: 127 gagggagtag 136
||||||||||
Sbjct: 132 gagggagtag 141
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
||||| ||||||||||||||| |||| | |||||||||| |||||||| ||||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcatat 89
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||||| ||||||| || | |||||||| ||||||||||||||||
Sbjct: 56 atatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 60.0 bits (30), Expect = 9e-09
Identities = 102/125 (81%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacattt--atatttagat 71
|||||||||| ||||| | |||||| | |||||||||| |||| || | || | |||||
Sbjct: 5 tacttcctccttttcatattataagactttctagcattgtccatatattcatgtctagat 64
Query: 72 tcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggaggg 131
||||||| | |||||||| || | |||||||||| | |||| | ||||||||||||||
Sbjct: 65 tcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggg 124
Query: 132 agtag 136
|||||
Sbjct: 125 agtag 129
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 84 atatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
||||||||||| | |||||||||| | |||||||||||||||||||
Sbjct: 56 atatgaatatgggcaatgctagaaagtcttacattatgaaacggag 11
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 100 tgctagaatgacttacattatgaaacggagggagta 135
|||||||| | |||||||| ||||||||||||||||
Sbjct: 63 tgctagaaagtcttacattgtgaaacggagggagta 98
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 78 atatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||| |||||||| ||| |||||||||| | |||||| ||||||||||||||||||
Sbjct: 62 atatctatatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
|||||| ||||| ||| |||||||| || | |||||||||| | |||||||| |||||||
Sbjct: 66 tagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacg 125
Query: 127 gagggagtag 136
|||| |||||
Sbjct: 126 gaggaagtag 135
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
||||||||||||||||||||| |||| | |||||||||| ||||||| ||||
Sbjct: 135 ctacttcctccgtttcacaatgtaagactttctagcattgcccacattcatat 83
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 62 atatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatg 121
|||| |||||| ||||| ||| |||||||| || |||||||||| | |||||||||||
Sbjct: 78 atatctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatg 19
Query: 122 aaacggagggagta 135
||| ||||||||||
Sbjct: 18 aaatggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 98 aatgctagaatgacttacattatgaaacggagggagta 135
|||||||||| | |||||||||||||||||||||||||
Sbjct: 87 aatgctagaaagtcttacattatgaaacggagggagta 124
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||| | |||||| || | |||||||||| | |||||||| |||||||
Sbjct: 90 tagattcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||||| || ||||| || || | |||||||||| | |||||||| |||||
Sbjct: 75 tttagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaa 16
Query: 125 cggagggagtag 136
|||||| |||||
Sbjct: 15 cggaggaagtag 4
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcatt 51
||||||||||||||||||||| |||| | ||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcatt 42
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||| ||||||||||||||| |||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcatt 121
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 66
|||||||||||||||||||| ||||| ||| ||| |||| ||||||| |||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 83 aatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||| |||||||| || ||| ||||||||| ||||||||||| ||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 83 aatatgaatatgagaaatgctagaatgacttacattatgaaacggagggagta 135
||||||||| || ||||| ||| ||| ||||||||| ||||||||||| ||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagt 39
|||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||| |||||||| || | |||| ||||| | |||||||| |||||||
Sbjct: 90 tagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacg 149
Query: 127 gagggagta 135
|||||||||
Sbjct: 150 gagggagta 158
Score = 54.0 bits (27), Expect = 5e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 61 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 120
||||| |||||| |||| ||| |||||||| || | ||||||| || | ||||||||||
Sbjct: 79 tatatatagatttattagcatctatatgaatgtgggtaatgctataaagtcttacattat 20
Query: 121 gaaacggagggagta 135
|||||||||| ||||
Sbjct: 19 gaaacggaggaagta 5
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 69 gattcattaatatcaatatgaatatgagaaatgctagaatgactt 113
||||||||| |||||||||||| || ||||||||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 69 gattcattaatatcaatatgaatatgagaaatgctagaatga 110
||||||||| |||||||||||| || |||||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 36 aagtcattctagcattttccacatttatatt 66
||||||||||||||||| ||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatatt 31
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||| |||||| ||| |||||||| | | | |||||||| | ||||||||||||||||
Sbjct: 73 tagatccattaacatctatatgaatgtaaacagtgctagaaagtcttacattatgaaacg 14
Query: 127 gagggagta 135
|||||||||
Sbjct: 13 gagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
||||||||||| |||| |||||||| | ||||||||||
Sbjct: 158 tacttcctccgcttcataatataagactttctagcatt 121
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||| | |||||| | |||||||||| |||||||| ||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcatat 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcattttccacatt 60
|||| ||||||||||| | |||||| | |||||||||| ||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacatt 51
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 98 aatgctagaatgacttacattatgaaacggagggagta 135
|||||||||| | |||| | ||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||||| ||| |||||||| || | |||||||||| | |||| | |||||||
Sbjct: 62 tttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 121
Query: 125 cggagggagta 135
| |||| ||||
Sbjct: 122 ctgaggaagta 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 98 aatgctagaatgacttacattatgaaacggagggagtag 136
|||||||||| | |||| | |||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttataatatgaaacggagggagtag 4
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 126
||||||||||| ||| |||||||| || | |||||||||| | |||| | |||||||||
Sbjct: 90 tagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 149
Query: 127 gagggagtagc 137
|||| ||||||
Sbjct: 150 gaggaagtagc 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 12 gctacttcctccgtttcacaatataagtcattctagcattttccacatttatat 65
|||||||||||||||||| | |||||| | |||||||||| ||||||| ||||
Sbjct: 160 gctacttcctccgtttcatattataagactttctagcattgcccacattcatat 107
Score = 50.1 bits (25), Expect = 8e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 71 ttcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggagg 130
|||||||| ||| |||||| | || | |||||||||| | |||| | |||||||||||||
Sbjct: 69 ttcattaacatctatatgattgtgggcaatgctagaaagtcttataatatgaaacggagg 10
Query: 131 gagta 135
|||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 70 attcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacggag 129
|||||||| ||| ||||||||||| | |||||||||| | |||| | ||||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggag 108
Query: 130 ggagtag 136
| |||||
Sbjct: 109 gaagtag 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcatt 51
||||||||||||||||| | |||||| | ||||||||||
Sbjct: 115 ctacttcctccgtttcatattataagactttctagcatt 77
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 13 ctacttcctccgtttcacaatataagtcattctagcatt 51
|||||||||||||| ||||||||||| | ||||||||||
Sbjct: 139 ctacttcctccgttccacaatataagactttctagcatt 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||||| ||| || | || || | |||||||||| |||||||| |||||
Sbjct: 75 tttagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaa 16
Query: 125 cggagggagta 135
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||||||| ||| |||||||| || | |||||||||| | |||| | |||||||
Sbjct: 62 tttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 121
Query: 125 cggagggagta 135
| |||| ||||
Sbjct: 122 ctgaggaagta 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 98 aatgctagaatgacttacattatgaaacggagggagtag 136
|||||||||| | |||| | |||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttataatatgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctag 105
|||||||||||||||||||||||| || ||||||||||
Sbjct: 39 tagattcattaatatcaatatgaacgtgggaaatgctag 1
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 67 tagattcattaatatcaatatgaatatgagaaatgctag 105
|||||||||||||||||||||||| || ||||||||||
Sbjct: 53 tagattcattaatatcaatatgaacgtgggaaatgctag 91
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||||||||||||||||||| |||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatctaagcctttctagcatt 42
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 14 tacttcctccgtttcacaatataagtcattctagcatt 51
|||||||||||||||||||| |||| | ||||||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcatt 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 65 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 124
|||||||||| ||| ||| | |||||| || | |||||||||| | |||||||| |||||
Sbjct: 70 tttagattcaataacatctaaatgaatgtg-gcaatgctagaaagtcttacattgtgaaa 128
Query: 125 cggagggagta 135
|||||| ||||
Sbjct: 129 cggaggaagta 139
