miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 132/145 (91%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||| ||||||| |||||||||| ||| ||||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagtatttttcacattcatatt-gattttaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 88 atagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgttagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 28 ttaca-ttgtgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 123/145 (84%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||| ||||| | |||||||||| ||| ||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctaacatttcccacattcatatt-gatattaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | |||||||||||| ||||||||||||||| |||| ||||||||
Sbjct: 75 acatatatatctatctagattcattaaaatcaatatgaatgtgaaaaatactagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 135 ttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 161 bits (81), Expect = 4e-39
Identities = 132/145 (91%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt-gatgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | || ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 75 atagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||||||||
Sbjct: 135 ttaca-ttgtgaaacggaggaagta 158
Score = 113 bits (57), Expect = 8e-25
Identities = 126/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||| |||| | |||||||||| ||||||||| ||| |||
Sbjct: 147 tttcacaatgtaagtcattctaatatttcccacattcatatt-gatgttaatgaatgtag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 28 ttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 153 bits (77), Expect = 1e-36
Identities = 131/145 (90%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| |||||||||||| || |||||||||| ||| |||| |||||||
Sbjct: 16 tttcacaatataagtcattctagcatttctcacattcatatt-gatactaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 75 atagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgttagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 135 ttaca-ttgtgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 5e-20
Identities = 124/145 (85%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||| ||||| | |||||||||| |||| |||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctaacatttaccacattcatatt-gatgctaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | ||||||||||| ||||||||||||||| |||||| ||||||||
Sbjct: 88 acatatatatctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||| | |||||||||||||||||||
Sbjct: 28 ttata-ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 153 bits (77), Expect = 1e-36
Identities = 134/149 (89%), Gaps = 3/149 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| | ||| |||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacatccatatt-gatgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | |||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 75 atagatatatatgtctagattcattaacaacaatatgaatgtgggaaatactagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagtatatg 171
||||| |||||||||||||| ||||||||
Sbjct: 135 ttaca-ttgtgaaacggagggagtatatg 162
Score = 113 bits (57), Expect = 8e-25
Identities = 126/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||| |||| | |||||||||| | ||||||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagtatttcccacattcatatt-gttgttaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | |||||||||||||||||||||| |||||| ||||| ||||||||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatggatgtggaaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||||||||
Sbjct: 28 ttaca-ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 128/142 (90%), Gaps = 3/142 (2%)
Strand = Plus / Minus
Query: 27 cacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctagata 86
|||||||||||| ||||||||||||||| |||||||||| ||| ||||| |||||| |||
Sbjct: 144 cacaatataagtcattctagcatttttcacattcatatt-gatattaatgaatctaaata 86
Query: 87 gatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgattta 145
||||||||| | |||||||||||||| |||||| ||||||||||||| |||||||| |||
Sbjct: 85 gatatatatgtctagattcattaacaccaatataaatgtgggaaatgctagaatgactta 26
Query: 146 catttgtgaaacggaggaagta 167
|| |||||||||||||| ||||
Sbjct: 25 ca-ttgtgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 123/145 (84%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||| ||||| | ||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttatattgg-tgttaatgaatctag 74
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | |||||||||||||| ||||||||||||||| ||||| ||||||||
Sbjct: 75 acatatatatctatttagattcattaatatcaatatgaatgtgaaaaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||| | ||||| |||||||| ||||
Sbjct: 135 ttata-ttgtggaacggagggagta 158
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 130/145 (89%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| || ||||||||| | | |||||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcatatatta-gttaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | |||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 88 atagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgatagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 28 ttaca-ttgtgaaacggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/146 (84%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||| ||||| | |||||||||| ||| ||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctatcatttcccacattcatatt-gatattaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | ||||||||||||| ||||||||||| |||||| ||||||||
Sbjct: 75 acatatatatctatctagattcattaactaatatatgaatgtgagaaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagtat 168
||||| ||||||||||||||||||||
Sbjct: 135 ttaca-ttgtgaaacggaggaagtat 159
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 131/147 (89%), Gaps = 7/147 (4%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| | ||||||||| ||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccatattcatatt-gatgttaatgaatcta- 73
Query: 84 atagatatatattt---tagattcattaacatcaatatgaatgtgggaaatgttagaatg 140
|| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 74 -tacatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctagaatg 132
Query: 141 atttacatttgtgaaacggaggaagta 167
| ||||| |||||||||||||||||||
Sbjct: 133 acttaca-ttgtgaaacggaggaagta 158
Score = 137 bits (69), Expect = 6e-32
Identities = 129/145 (88%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||||| ||||||||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatatt-gatgttaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||| |||||||| | ||||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 88 ataaatatatatgtatagattcattaacatcaatatgaatatggaaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 28 ttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 6e-32
Identities = 129/145 (88%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||| ||||||||| | ||||||||||| || ||||||||| |||
Sbjct: 16 tttcacaatgtaagtcattatagcattttccacattcatattt-atattaataaatttag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|| |||||||| | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 75 ctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 135 ttaca-ttgtgaaacggagggagta 158
Score = 85.7 bits (43), Expect = 2e-16
Identities = 125/148 (84%), Gaps = 7/148 (4%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||| ||||||||||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcata-ttgatgttaatgaatctag 89
Query: 84 atagatatatattt---tagattcattaacatcaatatgaatgtgggaaatgttagaatg 140
| |||||||||| || ||| ||||| || ||||||||||||| ||||| || ||||
Sbjct: 88 --acatatatatttagctaaatttattaatataaatatgaatgtggaaaatgctataatg 31
Query: 141 atttacatttgtgaaacggaggaagtat 168
| ||||| |||||||||||||| |||||
Sbjct: 30 acttaca-ttgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 137 bits (69), Expect = 6e-32
Identities = 129/145 (88%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||| |||||| | |||||||||| ||| ||||| ||||||
Sbjct: 147 tttcacaatgtaagtcattctaacattttccacattcatatt-gatattaatgaatctaa 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 88 atagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 28 ttaca-ttgtgaaacggagggagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 128/145 (88%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||| | ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatagt-gatgttaatgaatctag 74
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | |||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 75 acatatatatctatttagattcattaatatcaatatgaatgtggaaaatgttagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 135 ttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 6e-32
Identities = 129/145 (88%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| ||| |||||||| | |||||||||| |||||||| |||||||
Sbjct: 147 tttcacaatataagtcattttagcatttcccacattcatatta-atgttaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | |||||||||||||||||||||||||||||| |||| || |||||
Sbjct: 88 atagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgctataatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 28 ttaca-ttgtgaaacggagggagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 125/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||| ||||||| | |||||||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattatagcattacccacattcatatt-gatgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | ||||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 75 acatatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||| | |||||||||||||||||||
Sbjct: 135 ttata-ttgtgaaacggaggaagta 158
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 135 bits (68), Expect = 2e-31
Identities = 127/144 (88%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||||| ||||||||| ||||||
Sbjct: 146 tttcacaatgtaagtcattctagcatttcccacattcatatt-gatgttaatgaatctaa 88
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
| | || ||| | ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 87 acatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 28
Query: 144 tacatttgtgaaacggaggaagta 167
|||| |||||||||||||||||||
Sbjct: 27 taca-ttgtgaaacggaggaagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 129/145 (88%), Gaps = 4/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt-gatgttaatgaatctag 74
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| ||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 75 c-acatacatatgtttagattcattaacatcaatatgaatgtgggaaatgctagaatgac 133
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 134 ttaca-ttgtgaaacggagggagta 157
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 135 bits (68), Expect = 2e-31
Identities = 100/108 (92%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 35 aagttattctagcatttttcgcattcatatttgatgttaataaatctagatagatatata 94
|||| |||||||||||| || |||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatatt-gatgttaatgaatctagatagatatata 59
Query: 95 ttt-tagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
| | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 60 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 107
Score = 95.6 bits (48), Expect = 2e-19
Identities = 95/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 35 aagttattctagcatttttcgcattcatatttgatgttaataaatctagatagatatata 94
|||| |||||||||||| | |||||||||| ||||||||| |||||||| | ||||||
Sbjct: 110 aagtcattctagcatttcccacattcatatt-gatgttaatgaatctagacatatatatc 52
Query: 95 ttt-tagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
| | |||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 51 tatctagattcattaacatcaatatgaatgtgagaaatgctagaatga 4
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 133 bits (67), Expect = 9e-31
Identities = 127/143 (88%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 26 tcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctagat 85
||||||| ||||| |||||||||||| | |||||||||| ||| ||||| |||||||||
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatatt-gatattaatgaatctagat 87
Query: 86 agatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgattt 144
|||||||||| | ||||||||||||||||||||| ||||||||||||| | ||||| ||
Sbjct: 86 agatatatatgtctagattcattaacatcaatataaatgtgggaaatgcaaaaatgactt 27
Query: 145 acatttgtgaaacggaggaagta 167
||| |||||||||||||||||||
Sbjct: 26 aca-ttgtgaaacggaggaagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 124/145 (85%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||| | |||||| | |||| ||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcatttttgcatttcccacatttatatt-gatgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | |||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 75 acatatatatctatctagattcattaatatcaatatgaatgtgggaaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||| ||||||| ||||
Sbjct: 135 ttaca-ttgtgatacggagggagta 158
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 131 bits (66), Expect = 4e-30
Identities = 129/145 (88%), Gaps = 5/145 (3%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||| ||||| ||||||||||||||||
Sbjct: 145 tttcacaatgtaagtcattctagcattt--cacatttatatt-gatgttaataaatctat 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | ||||||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 88 atagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 28 ttaca-ttgtgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/145 (84%), Gaps = 5/145 (3%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||| ||||||| | ||||||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattcaagcatttcccatattcatatt-gatgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | |||||| |||||||||||||| ||||| |||||| ||||||||
Sbjct: 75 acatatatatctatatagatttattaacatcaatataaatgt--gaaatgctagaatgac 132
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 133 ttaca-ttgtgaaacggagggagta 156
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 131 bits (66), Expect = 4e-30
Identities = 129/145 (88%), Gaps = 5/145 (3%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||| ||||| ||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt--cacatttatatt-gatgttaataaatctat 72
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | ||||||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 73 atagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgac 132
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 133 ttaca-ttgtgaaacggagggagta 156
Score = 83.8 bits (42), Expect = 7e-16
Identities = 123/145 (84%), Gaps = 5/145 (3%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||| ||||||| | ||||||||| ||||||||| |||||||
Sbjct: 145 tttcacaatgtaagtcattcaagcatttcccatattcatatt-gatgttaatgaatctag 87
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | |||||| |||||||||||||| ||||| |||||| ||||||||
Sbjct: 86 acatatatatctatatagatttattaacatcaatataaatgt--gaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 28 ttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 128/145 (88%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| |||||||||||| | |||||||||| ||| ||||| |||||||
Sbjct: 147 tttcacaatataagtcattctagcatttcccacattcatatt-gatattaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||| |||||| | | ||||||||||||||| ||||||||||||| ||| ||||||||||
Sbjct: 88 atatatatatttatctagattcattaacattaatatgaatgtggaaaaagttagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||| | |||||||||||||||||||
Sbjct: 28 ttata-ttgtgaaacggaggaagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 128/145 (88%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| |||||| | |||| | |||||||||| |||||||| |||||||
Sbjct: 16 tttcacaatataagtcattctaactttttccacattcatatta-atgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||| |||||||| | |||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 75 ataaatatatatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||| | |||||||||||||| ||||
Sbjct: 135 ttata-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 127 bits (64), Expect = 6e-29
Identities = 106/116 (91%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 56 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 114
|||||||||| ||| ||||| ||||||||||||||||||| | |||||||||||||||||
Sbjct: 47 cattcatatt-gatattaatgaatctagatagatatatatgtctagattcattaacatca 105
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||||||||| |||| ||||||||| ||||| |||||||||||||| |||||||
Sbjct: 106 atatgaatgtggaaaatattagaatgacttaca-ttgtgaaacggagggagtatat 160
Score = 87.7 bits (44), Expect = 5e-17
Identities = 94/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||| ||||| | |||||||||| ||||||||| |||||||
Sbjct: 146 tttcacaatgtaagtcattctaatattttccacattcatatt-gatgttaatgaatctag 88
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaa 130
| | |||||| | | |||||||||||| ||||||||||||||||||||
Sbjct: 87 acatatatatctatctagattcattaatatcaatatgaatgtgggaaa 40
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 113/127 (88%), Gaps = 2/127 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||||| | ||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt-gttgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | ||||||||||| ||||||||||||||||||||||| | ||||||
Sbjct: 75 atagatatatatgtctagattcattaccatcaatatgaatgtgggaaatggtggaatgac 134
Query: 143 ttacatt 149
|||||||
Sbjct: 135 ttacatt 141
Score = 99.6 bits (50), Expect = 1e-20
Identities = 101/114 (88%), Gaps = 3/114 (2%)
Strand = Plus / Minus
Query: 56 cattcatatttgatgttaataaatctagatagatatatattt-tagattcattaacatca 114
|||||||||| |||| |||| |||||||| | |||||| | | |||||||||||||| ||
Sbjct: 115 cattcatatt-gatggtaatgaatctagacatatatatctatctagattcattaacaaca 57
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||||| |||||||| ||||| |||||||||||||| |||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagtat 4
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 125 bits (63), Expect = 2e-28
Identities = 95/103 (92%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 66 tgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgt 124
|||||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||||
Sbjct: 61 tgatgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgt 120
Query: 125 gggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 121 gggaaatgctagaatgacttaca-ttgtgaaacggagggagta 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 126/149 (84%), Gaps = 7/149 (4%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||| |||||||||| |||||||
Sbjct: 151 tttcacaatgtaagtcattctagcatttcccacattcata-gtgatgttaatgaatctag 93
Query: 84 atagatatatat-tttagattcattaacatca----atatgaatgtgggaaatgttagaa 138
| | |||||| | | ||||||||||||||||| ||||||| || |||||| |||||
Sbjct: 92 acatatatatctatctagattcattaacatcactatgtatgaatatgcgaaatgctagaa 33
Query: 139 tgatttacatttgtgaaacggaggaagta 167
||| ||||| |||||||||||||||||||
Sbjct: 32 tgacttaca-ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 123 bits (62), Expect = 9e-28
Identities = 128/146 (87%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||| ||||| || |||||||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctaccatttctcacattcatatt-gatgttaatgaatctag 74
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | |||||||||||| ||||| |||||| | | ||||| ||||||||
Sbjct: 75 atagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagtat 168
||||| |||||||||||||| |||||
Sbjct: 135 ttaca-ttgtgaaacggagggagtat 159
Score = 99.6 bits (50), Expect = 1e-20
Identities = 119/138 (86%), Gaps = 3/138 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| |||||| ||||| ||||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttctaaattcat-gttgatattaatgaatctag 89
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | |||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatgaatgtgagaaatggtagaatgac 29
Query: 143 ttacatttgtgaaacgga 160
||||| ||||||||||||
Sbjct: 28 ttaca-ttgtgaaacgga 12
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 127/145 (87%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||||| || |||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt-gacgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||||| ||||||||||| ||||||||| |||||||||||| || |||||
Sbjct: 75 atagatatatatttctagattcattaccatcaatattaatgtgggaaattctaaaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||| | |||||||||||||| ||||
Sbjct: 135 ttaga-ttgtgaaacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 125/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||| ||| |||| | |||| ||||| |||| |||| |||||||
Sbjct: 147 tttcacaatctaagtcattttagaatttcccacattaatatt-gatggtaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 88 aaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||||||||
Sbjct: 28 ttaca-ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 121 bits (61), Expect = 3e-27
Identities = 128/145 (88%), Gaps = 4/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
|||| |||| ||||| |||||||||||| || |||||||||| |||| |||| |||||||
Sbjct: 16 tttcgcaatgtaagtcattctagcatttctcacattcatatt-gatggtaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||||| |||||| | ||||||||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 75 ataga-atatatatctagattcattaacattaatataaatatgggaaatgttagaatgac 133
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 134 ttaca-ttgtgaaacggagggagta 157
Score = 89.7 bits (45), Expect = 1e-17
Identities = 88/101 (87%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 68 atgttaataaatctagatagatatatattttagattcattaacatcaatatgaatgtggg 127
|||||||| |||||||||| |||| | ||||||||||| |||||||||||||||| |
Sbjct: 103 atgttaatgaatctagatatatattctatctagattcattaccatcaatatgaatgtgag 44
Query: 128 aaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||| |||||||| ||||| ||| ||||||||||||||||
Sbjct: 43 aaatgctagaatgacttaca-ttgcgaaacggaggaagtat 4
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 127/145 (87%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||| || |||||||||||| ||||||||| ||| |||
Sbjct: 147 tttcacaatgtaagtcattctagcatattccgcattcatatt-gatgttaatgaatatag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | ||||| | | ||||||||||||||||||||||||| | ||||||| ||||||||
Sbjct: 88 acatctatatctatctagattcattaacatcaatatgaatataggaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||||||||
Sbjct: 28 ttaca-ttgtgaaacggaggaagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 126/146 (86%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| ||||||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcctatattcatatt-gatgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||||||||| || | || ||||||||||||||||||||||| || | ||| ||||||||
Sbjct: 75 atagatatagatgtctatattcattaacatcaatatgaatgcggaatatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagtat 168
||||| |||||||||||||| |||||
Sbjct: 135 ttaca-ttgtgaaacggagggagtat 159
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 127/145 (87%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
|||||||||||||| ||||||||||||||| |||| ||||| |||| |||| |||||||
Sbjct: 147 tttcacaatataagccattctagcatttttcacatttatatt-gatgataatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | ||||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 88 acatatatatctatctagattcattaacataaatatgaatgtgggaaatgctacaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||| | |||||||||||||||||||
Sbjct: 28 ttata-ttgtgaaacggaggaagta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 128/147 (87%), Gaps = 3/147 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| ||| |||||||| | ||||||||||| |||||||| |||||||
Sbjct: 16 tttcacaatataagtcattgtagcatttcccacattcatattt-atgttaatgaatctag 74
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | ||||||||||| ||||||||| |||||| ||||| |||||||
Sbjct: 75 atagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgctagaatggc 134
Query: 143 ttacatttgtgaaacggaggaagtata 169
||| | |||||||||||||| ||||||
Sbjct: 135 ttata-ttgtgaaacggagggagtata 160
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 127/145 (87%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||| |||||||| | |||||||||| | ||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattttagcatttcccacattcatattag-tgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | ||||||||||||||| ||||||||||||| |||| ||||||||
Sbjct: 75 atagatatatatgtctagattcattaacattaatatgaatgtggagaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 135 ttaca-ttgtgaaacggagggagta 158
Score = 113 bits (57), Expect = 8e-25
Identities = 126/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||| | | |||||||||| |||||||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattctccacattcatatta-atgttaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | |||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 88 acatatatatctatctagattcattaacactaatatgaatgtgggaaatgctaaaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||||||||
Sbjct: 28 ttaca-ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 119 bits (60), Expect = 1e-26
Identities = 98/108 (90%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 35 aagttattctagcatttttcgcattcatatttgatgttaataaatctagatagatatata 94
|||| |||||||||||| | |||||||||| ||||||||| |||||| |||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatatt-gatgttaatgaatctaaatagatatata 52
Query: 95 ttt-tagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
| | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 51 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 4
Score = 111 bits (56), Expect = 3e-24
Identities = 97/108 (89%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 35 aagttattctagcatttttcgcattcatatttgatgttaataaatctagatagatatata 94
|||| |||||||||||| | |||||||||| ||||||||| |||||||| | ||||||
Sbjct: 1 aagtcattctagcatttcccacattcatatt-gatgttaatgaatctagacatatatatc 59
Query: 95 t-tttagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 60 tatttagattcattaacatcaatatgaatgtgggaaatgctagaatga 107
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 127/146 (86%), Gaps = 3/146 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| ||||||||||||| ||||||||| |||| |||| |||||||
Sbjct: 147 tttcacaatataagtcattctagcattttctatattcatatt-gatgctaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | |||| ||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 88 acatatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagtat 168
||||| ||||||||||||||||||||
Sbjct: 28 ttaca-ttgtgaaacggaggaagtat 4
Score = 113 bits (57), Expect = 8e-25
Identities = 126/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| | ||||| |||| ||||||||| | |||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcgtatt-gatgttaatgactctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | ||||||||||| ||||||||||||| | | ||||| ||||||||
Sbjct: 75 atagatatatatgtctagattcattagcatcaatatgaatatagaaaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||| | |||||||||||||| ||||
Sbjct: 135 ttata-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 113 bits (57), Expect = 8e-25
Identities = 126/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||||| |||||||| | |||||||| |||||||
Sbjct: 145 tttcacaatgtaagtcattctagcatttttcacattcata-ctcatgttaatgaatctag 87
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
||| |||||| | || |||||||||||| | ||||||||||||||||| ||||||| |
Sbjct: 86 atatatatat-gtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgact 28
Query: 144 tacatttgtgaaacggaggaagtat 168
|| | ||||||||||||||||||||
Sbjct: 27 tata-ttgtgaaacggaggaagtat 4
Score = 87.7 bits (44), Expect = 5e-17
Identities = 122/144 (84%), Gaps = 3/144 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| ||||| |||||| | |||||||| | |||||||| ||| |||
Sbjct: 16 tttcacaatataagtcattctggcatttcccacattcatactc-atgttaatgaatttag 74
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
| | |||||||| | |||||||||||||| | |||||||||| ||||| |||||||| |
Sbjct: 75 acatatatatatct-agattcattaacatgagtatgaatgtgaaaaatgctagaatgact 133
Query: 144 tacatttgtgaaacggaggaagta 167
|||| |||||||||||||| ||||
Sbjct: 134 taca-ttgtgaaacggagggagta 156
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 95/105 (90%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 65 ttgatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatg 123
||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||||||
Sbjct: 56 ttgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatg 115
Query: 124 tgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||| ||||||| ||||| |||||||||||||| |||||
Sbjct: 116 tgggaaatactagaatgtcttaca-ttgtgaaacggagggagtat 159
Score = 56.0 bits (28), Expect = 2e-07
Identities = 81/96 (84%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| |||| ||||||| |||| | |||||||||| ||| ||||| |||||||
Sbjct: 147 tttcacaatgtaagacattctagtatttcccacattcatatt-gatattaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatat 118
| | |||||| | | |||||||||||||||||||||
Sbjct: 88 acatatatatctatctagattcattaacatcaatat 53
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 113 bits (57), Expect = 8e-25
Identities = 126/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt-gatgttaatgaatctag 74
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
|||| |||| | |||||||||||||||||||| || |||||||||| |||||||| |
Sbjct: 75 ataggcatatgtcc-agattcattaacatcaatataaacgtgggaaatgctagaatgact 133
Query: 144 tacatttgtgaaacggaggaagtat 168
|| | ||||||||||||||||||||
Sbjct: 134 tata-ttgtgaaacggaggaagtat 157
Score = 103 bits (52), Expect = 8e-22
Identities = 124/144 (86%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| |||||||||||| | | || ||||| ||||||||| ||||| |
Sbjct: 145 tttcacaatataagtcattctagcatttcccacgtttatatt-gatgttaatgaatctgg 87
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
| | || ||| | |||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 86 acatatgcctatct-agattcattaacatcaatatgaatgtgggaaatgctagaatgact 28
Query: 144 tacatttgtgaaacggaggaagta 167
|||| |||||||||||||| ||||
Sbjct: 27 taca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 113 bits (57), Expect = 8e-25
Identities = 123/141 (87%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 27 cacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctagata 86
|||||| ||||| ||||||||||||| |||||||||| ||||||||| ||| |||| |
Sbjct: 19 cacaatgtaagtcattctagcattttctacattcatatt-gatgttaatgaatgtagaca 77
Query: 87 gatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttac 146
|||||| | | |||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 78 tatatatgtct-agattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 136
Query: 147 atttgtgaaacggaggaagta 167
| ||||| |||||||| ||||
Sbjct: 137 a-ttgtggaacggagggagta 156
Score = 111 bits (56), Expect = 3e-24
Identities = 125/144 (86%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 27 cacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctagata 86
|||||| ||||| |||||||||||| | |||||||||| ||||||||| |||||||| |
Sbjct: 142 cacaatgtaagtcattctagcatttcccacattcatatt-gatgttaatgaatctagaca 84
Query: 87 gatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttac 146
|||||| | | | |||||||||||||||||||||||| | ||||| |||||||| ||||
Sbjct: 83 tatatatgtct-acattcattaacatcaatatgaatgtagaaaatgctagaatgacttac 25
Query: 147 atttgtgaaacggaggaagtatat 170
| ||||| ||||||||||||||||
Sbjct: 24 a-ttgtggaacggaggaagtatat 2
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 111 bits (56), Expect = 3e-24
Identities = 124/144 (86%), Gaps = 7/144 (4%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| |||||||||||| |||||||||| |||| |||| |||||||
Sbjct: 141 tttcacaatataagtcattctagcatttcctacattcatatt-gatgctaatgaatctag 83
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
| | |||| || ||||||||| ||||||||||||||||||||||| |||||||| |
Sbjct: 82 acatatatcta-----gattcattagcatcaatatgaatgtgggaaatgctagaatgact 28
Query: 144 tacatttgtgaaacggaggaagta 167
|||| |||||||||||||||||||
Sbjct: 27 taca-ttgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 121/144 (84%), Gaps = 7/144 (4%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||||| |||| |||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt-gatgctaatgaatctag 74
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
||| || | || ||||||||| ||||||||||||||| ||||||| |||||||| |
Sbjct: 75 atatatgtcta-----gattcattagcatcaatatgaatgtaggaaatgctagaatgact 129
Query: 144 tacatttgtgaaacggaggaagta 167
|| | |||||||||||||| ||||
Sbjct: 130 tata-ttgtgaaacggagggagta 152
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 109 bits (55), Expect = 1e-23
Identities = 123/144 (85%), Gaps = 10/144 (6%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||||| ||||||||| |||||||
Sbjct: 138 tttcacaatgtaagtcattctagcatttcccacattcatatt-gatgttaatgaatctag 80
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
| | | ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 79 aatg--------tctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 28
Query: 144 tacatttgtgaaacggaggaagta 167
|||| |||||||||||||||||||
Sbjct: 27 taca-ttgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 123/144 (85%), Gaps = 10/144 (6%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt-gatgttaatgaatctag 74
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
| | || ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 75 aca--------ttctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 126
Query: 144 tacatttgtgaaacggaggaagta 167
|||| |||||||||||||| ||||
Sbjct: 127 taca-ttgtgaaacggagggagta 149
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 111/127 (87%), Gaps = 2/127 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| | ||||||||| | ||||||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcatatagg-tgttaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | ||||||| | |||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 88 acatctatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgac 29
Query: 143 ttacatt 149
|||||||
Sbjct: 28 ttacatt 22
Score = 87.7 bits (44), Expect = 5e-17
Identities = 88/100 (88%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 69 tgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtggg 127
||||||| |||||||||| ||||| || | |||||||||||||| | ||||||||||||
Sbjct: 60 tgttaatgaatctagatatatatagatgtctagattcattaacacctatatgaatgtgga 119
Query: 128 aaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 120 aaatgctagaatgacttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 123/142 (86%), Gaps = 3/142 (2%)
Strand = Plus / Plus
Query: 27 cacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctagata 86
|||| ||||||| ||||||| ||||| | ||||||||| |||| |||| ||| ||||||
Sbjct: 19 cacagtataagtcattctagtattttccatattcatatt-gatgctaatgaatttagata 77
Query: 87 gatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgattta 145
||||||||| ||||||||||||| ||||||||||||| || ||||||||||||||| |||
Sbjct: 78 gatatatatgtttagattcattagcatcaatatgaatatgagaaatgttagaatgactta 137
Query: 146 catttgtgaaacggaggaagta 167
| ||||| |||||||| ||||
Sbjct: 138 ta-ttgtggaacggagggagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 117/142 (82%), Gaps = 3/142 (2%)
Strand = Plus / Minus
Query: 27 cacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctagata 86
|||||||||||| |||||| ||||| || ||||||||| |||| |||| |||||| | |
Sbjct: 144 cacaatataagtcattctaacatttctcatattcatatt-gatgctaatgaatctaaaca 86
Query: 87 gatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgattta 145
|||||| | | || |||||||| ||||||||||||| ||| |||| |||||||| |||
Sbjct: 85 tatatatctatctaaattcattagcatcaatatgaatatggaaaatactagaatgactta 26
Query: 146 catttgtgaaacggaggaagta 167
| |||| |||||||||||||
Sbjct: 25 ta-ctgtggaacggaggaagta 5
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 107 bits (54), Expect = 5e-23
Identities = 67/70 (95%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||| ||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcata-ttgatgttaatgaatctag 74
Query: 84 a 84
|
Sbjct: 75 a 75
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 107 bits (54), Expect = 5e-23
Identities = 64/66 (96%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 75 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttaca-ttgtgaa 17
Query: 156 acggag 161
||||||
Sbjct: 16 acggag 11
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaa 121
||||||||||||||||||||||||
Sbjct: 82 tagattcattaacatcaatatgaa 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatcta 82
||||||||| ||||| |||||| ||||| | |||||||||| ||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctaacatttcccacattcatatt-gatgttaatgaatcta 73
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 107 bits (54), Expect = 5e-23
Identities = 125/146 (85%), Gaps = 7/146 (4%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| |||||||||||| | |||||||||| ||||| ||| |||||||
Sbjct: 141 tttcataatgtaagtcattctagcatttcccacattcatatt-gatgtcaatgaatctag 83
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
| |||| | || |||||||| |||||||||||||||||||||||| |||||||| |
Sbjct: 82 acagatgtcta-----gattcattgacatcaatatgaatgtgggaaatgatagaatgact 28
Query: 144 tacatttgtgaaacggaggaagtata 169
|||| |||||||||||||||||||||
Sbjct: 27 taca-ttgtgaaacggaggaagtata 3
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||| |||||||||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 84 tagattcattgacatcaatatgaatgtgggaaatgctagaatgacttaca-ttatgaaac 142
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 143 ggagggagta 152
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 126/146 (86%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||| | ||||| ||| || ||||| || ||||||||| ||||||||| |||||||
Sbjct: 16 tttcacattgtaagtcattttatcatttctcacattcatata-gatgttaatgaatctag 74
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | ||||||| ||||||||||| |||||| |||||||||||||||||| ||||||||
Sbjct: 75 acatctatatatatttagattcatcaacatctatatgaatgtgggaaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagtat 168
||||| |||||||||||||| |||||
Sbjct: 135 ttaca-ttgtgaaacggagggagtat 159
Score = 89.7 bits (45), Expect = 1e-17
Identities = 123/145 (84%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | ||||||||| |||||| || ||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttcccacattcatata-gatgttgatgaatctaa 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||| ||||| || | |||||||||||||||| ||||||||||| |||||| || |||||
Sbjct: 88 atatatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| ||||||||||||| ||||
Sbjct: 28 ttaca-atgtgaaacggagggagta 5
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 107 bits (54), Expect = 5e-23
Identities = 67/70 (95%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 68 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttaca-ttgtgaaac 126
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 127 ggagggagta 136
Score = 73.8 bits (37), Expect = 7e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttaca-ttgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||| ||||| | |||||||||| ||||||||| |||||||
Sbjct: 125 tttcacaatgtaagtcattctaacatttcccacattcatatt-gatgttaatgaatctag 67
Query: 84 atagatat 91
||||||||
Sbjct: 66 atagatat 59
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 125/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| || |||||||||| |||||||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcatatta-atgttaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| |||||||||||||||| |||||||| |||| |||| ||||||||
Sbjct: 88 acatatatatccaactagattcattaacatccatatgaatatgggtaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||||||||
Sbjct: 28 ttaca-ttgtgaaacggaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 125/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||| | |||||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattacccatattcatatg-gatgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| ||||||||| | ||||||||||||||| |||||||||||| |||||| ||||||||
Sbjct: 75 ttggatatatatgtctagattcattaacattaatatgaatgtgagaaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 135 ttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 125/145 (86%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| | |||||||| ||||||||||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcata-ttgatgttaatgaatctag 89
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| |||||||| ||||||||||| |||| |||||||||||| |||| ||||||||
Sbjct: 88 acttatatatatgcctagattcattagcatctatatgaatgtggacaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
|||| |||||||||||||||||||
Sbjct: 28 ataca-ttgtgaaacggaggaagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 124/145 (85%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| || || ||||||||||| | | ||||||||| |||| |||| |||||||
Sbjct: 16 tttcacaatgtatgtcattctagcattgtccacattcatata-gatgctaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| ||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 75 gcatatatataagtctagattcattaacatcaatatgaatgtggaaaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 135 ttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 103 bits (52), Expect = 8e-22
Identities = 65/68 (95%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacgg 13
Query: 160 aggaagta 167
||||||||
Sbjct: 12 aggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
|||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattaca-ttgtgaaacgg 133
Query: 160 aggaagta 167
||| ||||
Sbjct: 134 agggagta 141
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattgacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtata 169
||||||||||||
Sbjct: 14 ggaggaagtata 3
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 108 aacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||||||||| |||||||| ||||| || ||||||||||| ||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttaca-ttatgaaacggagggagta 135
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||| ||||||| ||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcata-ttgatgtcaatgaatctag 74
Query: 84 a 84
|
Sbjct: 75 a 75
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 103 bits (52), Expect = 8e-22
Identities = 123/146 (84%), Gaps = 13/146 (8%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| | |||||||||| ||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatatt-gatgttaatgtatctag 74
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
||| ||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct: 75 ata-----------tagatacattaacatcaatatgaatgtgggaaatgctagaatgact 123
Query: 144 tacatttgtgaaacggaggaagtata 169
|||| ||||| |||||||||||||||
Sbjct: 124 taca-ttgtggaacggaggaagtata 148
Score = 91.7 bits (46), Expect = 3e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||| ||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 73 tagatacattaacatcaatatgaatgtggaaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtatatg 171
||||| ||||||||
Sbjct: 14 ggagggagtatatg 1
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 67 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttata-ttgtgaaac 125
Query: 158 ggaggaagtata 169
||||| ||||||
Sbjct: 126 ggagggagtata 137
Score = 73.8 bits (37), Expect = 7e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 107 taacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagt 166
|||||||||||||||||||| ||||| |||||||| ||| | ||||||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttata-ttgtgaaacggaggaagt 6
Query: 167 a 167
|
Sbjct: 5 a 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| |||||| ||||| | |||||||| ||||||||||| |||||||
Sbjct: 124 tttcacaatataagtcattctaacatttcccacattcata-ttgatgttaatgaatctag 66
Query: 84 ata 86
|||
Sbjct: 65 ata 63
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||||||||| ||||||||||||| | ||||||||||
Sbjct: 16 tttcacaatataagtcattctagcattttccacattcatatt 57
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 127/148 (85%), Gaps = 3/148 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
|||||||| ||||| ||| |||||||| | |||| ||||| ||||||||| |||||||
Sbjct: 147 tttcacaaagtaagtcattttagcatttcccacatttatatt-gatgttaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||||| |||||| | ||||||||| ||||||||||| ||||||||||||| | |||||
Sbjct: 88 atagaaatatatgtctagattcataaacatcaatataaatgtgggaaatgcaaaaatgac 29
Query: 143 ttacatttgtgaaacggaggaagtatat 170
|||| ||||||||||||||| |||||||
Sbjct: 28 ttac-tttgtgaaacggagggagtatat 2
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||| ||||||||||||| || ||||| |||| ||||||||||
Sbjct: 90 tagattcattaacatcaatataaatgtgggaaatgctaaaatgacttac-tttgtgaaac 148
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 149 ggaggaagta 158
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 126/147 (85%), Gaps = 3/147 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||| |||||||| || ||| |||||| |||| |||| |||||||
Sbjct: 147 tttcacaatgtaagtcattttagcatttctcacatccatatt-gatgctaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | |||||||||||| || | ||||||||||||||||| ||||||||
Sbjct: 88 acatatatatccgtctagattcattaatataagtatgaatgtgggaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagtata 169
||||| |||||||||||||||||||||
Sbjct: 28 ttaca-ttgtgaaacggaggaagtata 3
Score = 97.6 bits (49), Expect = 5e-20
Identities = 124/145 (85%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||| || || ||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatactt-atattaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| ||||||||| | ||||||||||| |||||||||| ||||| |||||| || |||||
Sbjct: 75 acggatatatatgtctagattcattagcatcaatatggatgtgagaaatgctaaaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||| ||||
Sbjct: 135 ttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 101 bits (51), Expect = 3e-21
Identities = 92/103 (89%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 65 ttgatgttaataaatctagatagatatatattttagattcattaacatcaatatgaatgt 124
||||||||||| ||||||||||||||||| | | |||||||||||||||||||||||| |
Sbjct: 49 ttgatgttaatgaatctagatagatatatgtct-agattcattaacatcaatatgaatat 107
Query: 125 gggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| || ||||| ||| | |||||||||||||| ||||
Sbjct: 108 gggaaatgctaaaatgacttata-ttgtgaaacggagggagta 149
Score = 65.9 bits (33), Expect = 2e-10
Identities = 80/93 (86%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| ||| |||||||| | ||||||| ||||||||||| |||||||
Sbjct: 138 tttcacaatataagtcattttagcatttcccatattcata-ttgatgttaatgaatctag 80
Query: 84 atagatatatattttagattcattaacatcaat 116
| | |||| || | |||||||||||||||||||
Sbjct: 79 acatatatcta-tctagattcattaacatcaat 48
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 99.6 bits (50), Expect = 1e-20
Identities = 82/90 (91%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 78 atctagatagatatatattttagattcattaacatcaatatgaatgtgggaaatgttaga 137
|||||||||||||||| | | |||| ||||||||||||||||||||||||||||| ||||
Sbjct: 42 atctagatagatatatgtct-agatccattaacatcaatatgaatgtgggaaatgctaga 100
Query: 138 atgatttacatttgtgaaacggaggaagta 167
|||| ||||| || ||||||||||||||||
Sbjct: 101 atgacttaca-ttatgaaacggaggaagta 129
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttaca-ttgtgaaacgga 12
Query: 161 ggaagtatat 170
||||||||||
Sbjct: 11 ggaagtatat 2
Score = 48.1 bits (24), Expect = 4e-05
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||| |||||| | ||||||||| ||||||||| ||| |||
Sbjct: 16 tttcacaatgtaagtcattctaacattttccatattcatatt-gatgttaatgaatgtag 74
Query: 84 atag 87
||||
Sbjct: 75 atag 78
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 99.6 bits (50), Expect = 1e-20
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggaggtagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||||||| ||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcata-ttgatgttaatgaatctag 74
Query: 84 a 84
|
Sbjct: 75 a 75
Score = 54.0 bits (27), Expect = 7e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 83 acatcaatatgtatgtacaaaatgctagaatgacttacatt-gtgaaacggaggaagta 140
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 97.6 bits (49), Expect = 5e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 99 agattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacg 158
|||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacg 14
Query: 159 gaggaagta 167
|||||||||
Sbjct: 13 gaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
|||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||| |
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttac-tttgtgaaacggaggga 134
Query: 165 gta 167
|||
Sbjct: 135 gta 137
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| |||||||||||| | ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 97.6 bits (49), Expect = 5e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||| ||||| ||||||||||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacattaatataaatgtgggaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtatat 170
|||||||||||||
Sbjct: 14 ggaggaagtatat 2
Score = 85.7 bits (43), Expect = 2e-16
Identities = 56/59 (94%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
|||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacgg 140
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/148 (85%), Gaps = 3/148 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| |||||| ||| ||| ||| |||||| |||| |||| |||||||
Sbjct: 147 tttcataatgtaagtcattctactattgttcacatccatatt-gatgctaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
|||||||||||| | |||||||||| |||| |||||||||||| ||||| ||||||||
Sbjct: 88 atagatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagtatat 170
||||| || ||||||||||| |||||||
Sbjct: 28 ttaca-ttatgaaacggagggagtatat 2
Score = 58.0 bits (29), Expect = 4e-08
Identities = 119/145 (82%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| ||||||||||||| | |||||||| | |||| ||| |||||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcata-tcgatgccaatgaatctag 74
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | ||||||||||| |||||||||| ||||| ||| ||||||||
Sbjct: 75 acatatatatctatctagattcattagcatcaatatggatgtgaacaatagtagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| || ||||||||||| ||||
Sbjct: 135 ttaca-ttatgaaacggagggagta 158
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
||||||||||||||||||||||||||||||||| ||| |||||||| ||| | |||||||
Sbjct: 62 tttagattcattaacatcaatatgaatgtgggatatgctagaatgacttata-ttgtgaa 120
Query: 156 acggaggaagta 167
||||||||||||
Sbjct: 121 acggaggaagta 132
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 108 aacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttaca-ttgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatcta 82
||||||||||||||| |||||||||| | | |||||||| ||||||||||| ||||||
Sbjct: 121 tttcacaatataagtcattctagcatatcccacattcata-ttgatgttaatgaatcta 64
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| ||||||||||||| | ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatatt 57
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/148 (85%), Gaps = 3/148 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| ||||||| ||||||| ||| ||||| |||| |||| |||||||
Sbjct: 147 tttcataatgtaagtcattctagtatttttcacatccatatc-gatgctaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||| |||||||| | |||||||||| |||| |||||||||||| ||||| ||||||||
Sbjct: 88 ataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagtatat 170
||||| || ||||||||||| |||||||
Sbjct: 28 ttaca-ttatgaaacggagggagtatat 2
Score = 58.0 bits (29), Expect = 4e-08
Identities = 119/145 (82%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| ||||||||||||| | |||||||| | |||| ||| |||||||
Sbjct: 16 tttcataatgtaagtcattctagcattttccacattcata-tcgatgccaatgaatctag 74
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | ||||||||||| |||| ||||| ||||| |||| ||||||||
Sbjct: 75 acatatatatttatctagattcattagcatcgatatggatgtgaaaaatactagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| || ||||||||||| ||||
Sbjct: 135 ttaca-ttatgaaacggagggagta 158
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 95.6 bits (48), Expect = 2e-19
Identities = 83/92 (90%), Gaps = 2/92 (2%)
Strand = Plus / Minus
Query: 77 aatctagatagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgtta 135
||||||||||||||||||| | ||||||||||||||||||||||||| || |||||| ||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgcta 36
Query: 136 gaatgatttacatttgtgaaacggaggaagta 167
|||||| ||||| || ||||||||||| ||||
Sbjct: 35 gaatgacttaca-ttatgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||| |||||||| ||||| |||| ||||||||||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttaca-ttgtaaaacggaggaagta 145
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| |||||||||||| || ||||||| ||||||||||| |||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttctcatattcata-ttgatgttaatgaatctag 74
Query: 84 atagatatat 93
| | ||||||
Sbjct: 75 acatatatat 84
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 95.6 bits (48), Expect = 2e-19
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttaca-ttgtgaaacgg 126
Query: 160 aggaagta 167
||||||||
Sbjct: 127 aggaagta 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||||||||||||| ||||| | ||||| ||||| ||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttaca-ttgtgaaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 54/63 (85%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||| |||||||| | |||||||||| ||||||||| |||| ||
Sbjct: 123 tttcacaatgtaagtcattttagcatttcccacattcatatt-gatgttaatgaatcaag 65
Query: 84 ata 86
|||
Sbjct: 64 ata 62
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||| || ||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 67 tagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaac 125
Query: 158 ggaggaagtata 169
||||||||||||
Sbjct: 126 ggaggaagtata 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaatggagggagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | ||||||||||| || ||||| |||||||
Sbjct: 124 tttcacaatgtaagtcattctagcatttcccacattcatattt-atattaatgaatctag 66
Query: 84 a 84
|
Sbjct: 65 a 65
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 23 atttcacaatataagttattctagcatttttcgcattcatatt 65
|||||||||| ||||| |||||||||||| | ||||||||||
Sbjct: 15 atttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 93.7 bits (47), Expect = 8e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtat 168
||| |||||||
Sbjct: 14 ggaagaagtat 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 121/147 (82%), Gaps = 13/147 (8%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| || |||||||||| ||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatatt-gatgttaatgaatctag 74
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
|| |||||||||||| |||||||| ||| ||| ||||| |||||||| |
Sbjct: 75 atg-----------tagattcattaatatcaatataaatatggaaaatgctagaatgact 123
Query: 144 tacatttgtgaaacggaggaagtatat 170
|||| |||||||||||||| |||||||
Sbjct: 124 taca-ttgtgaaacggagggagtatat 149
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 93.7 bits (47), Expect = 8e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtat 168
||| |||||||
Sbjct: 14 ggaagaagtat 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 120/147 (81%), Gaps = 13/147 (8%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| || |||||||| ||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcata-ttgatgttaatgaatctag 74
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
| | |||||||||||| |||||||| ||| ||| ||||| || ||||| |
Sbjct: 75 a-----------tgtagattcattaatatcaatataaatatggaaaatgctataatgact 123
Query: 144 tacatttgtgaaacggaggaagtatat 170
|||| |||||||||||||| |||||||
Sbjct: 124 taca-ttgtgaaacggagggagtatat 149
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 8e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttaca-ttgtgaaacgga 107
Query: 161 ggaagta 167
|||||||
Sbjct: 108 ggaagta 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 93.7 bits (47), Expect = 8e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||| |||||||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 47 tagattcattaatatcaatatgaatgtgggaaatgctagaatgacttaca-ttatgaaac 105
Query: 158 ggaggaagtat 168
|||||||||||
Sbjct: 106 ggaggaagtat 116
Score = 46.1 bits (23), Expect = 2e-04
Identities = 54/63 (85%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| |||||||||||| | |||||||| ||||| ||||| |||||||
Sbjct: 104 tttcataatgtaagtcattctagcatttcccacattcata-ttgatattaatgaatctag 46
Query: 84 ata 86
|||
Sbjct: 45 ata 43
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 93.7 bits (47), Expect = 8e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| ||||||||| |||||||| ||||| || ||||||
Sbjct: 72 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttaca-ttatgaaac 130
Query: 158 ggaggaagtat 168
|||||||||||
Sbjct: 131 ggaggaagtat 141
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 71 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttaca-ttgtgaaac 129
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 130 ggagggagta 139
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||| ||||||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacatta-tgaaacggaggaagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | ||||||| ||||||||||| |||||||
Sbjct: 128 tttcacaatgtaagtcattctagcatttcccatattcata-ttgatgttaatgaatctag 70
Query: 84 a 84
|
Sbjct: 69 a 69
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||| ||||| |||||||| ||||| || ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttaca-ttatgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 102 ttcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggag 161
|||||||||||||||||||||||| |||||| |||||||| ||||| ||||||||| |||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaaccgag 143
Query: 162 gaagta 167
| ||||
Sbjct: 144 ggagta 149
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 104 cattaacatcaatatgaatgtgggaaatgttaga-atgatttacatttgtgaaacggagg 162
||||| ||||||||||||||||||||||| || | |||| ||||| ||||||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttaca-ttgtgaaacggagg 138
Query: 163 aagta 167
||||
Sbjct: 139 gagta 143
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||| ||||| |||||||| ||||| || ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttaca-ttatgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 102 ttcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggag 161
||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||
Sbjct: 82 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaaccgag 140
Query: 162 gaagta 167
| ||||
Sbjct: 141 ggagta 146
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagta 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatcta 82
||||||||| ||||| |||||||||||| | |||||||| | ||||||||| ||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcata-tagatgttaatgaatcta 73
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| || ||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 76 tagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaac 134
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 135 ggaggaagta 144
Score = 77.8 bits (39), Expect = 5e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||| ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttaca-ttgtgaaacgga 12
Query: 161 ggaagta 167
|| ||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||||||||
Sbjct: 75 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttaca-ttgtgaaac 133
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 134 ggaggaagta 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Minus
Query: 104 cattaacatcaatatgaatgtgggaaatgttaga-atgatttacatttgtgaaacggagg 162
||||| ||||||||||||||||||||||| || | |||| ||||| ||||||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttaca-ttgtgaaacggagg 10
Query: 163 aagta 167
||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||| ||||||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacatta-tgaaacggaggaagtat 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | ||||||| ||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccatattcata-ttgatgttaatgaatctag 74
Query: 84 a 84
|
Sbjct: 75 a 75
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 91.7 bits (46), Expect = 3e-18
Identities = 123/145 (84%), Gaps = 9/145 (6%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||| |||| | |||||||||| ||||||||| | | |||
Sbjct: 141 tttcacaatgtaagtcattctagccttttccacattcatatt-gatgttaatgagtttag 83
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||||||| |||| | ||||| |||||||||||||||||| ||||| ||||||||
Sbjct: 82 atagatacatatgtctagat------acatcaatatgaatgtggaaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||||||||
Sbjct: 28 ttaca-ttgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
|||||||||||||||||||||||| ||| | |||||||| ||||| ||||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttaca-ttgtgaaacggagg 147
Query: 163 aagta 167
||||
Sbjct: 148 gagta 152
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaac 120
Query: 158 ggaggaagta 167
|||| ||||
Sbjct: 121 agagggagta 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
|||||||||||||||||||||| ||||| || ||||| ||| | ||||||||| ||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttata-ttgtgaaacagaggaa 4
Query: 165 gta 167
|||
Sbjct: 3 gta 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaata 76
||||||||||||||| ||| ||||||||| | |||||||| ||||||||||||
Sbjct: 12 tttcacaatataagtcattatagcattttccacattcata-ttgatgttaata 63
Score = 54.0 bits (27), Expect = 7e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatcta 82
||||||||| ||||| |||||||||||| | |||||||| ||||||||||| ||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcata-ttgatgttaatgaatcta 62
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 91.7 bits (46), Expect = 3e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 102 ttcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggag 161
||||||||||||||||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgca-ttgtgaaacggag 11
Query: 162 gaagta 167
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| | |||||||| ||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcata-ttgatgttaatgaatctag 74
Query: 84 a 84
|
Sbjct: 75 a 75
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 120 aatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||||||| || || || ||||||||||||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttcca-ttatgaaacggaggaagta 134
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggagg 125
Query: 163 aagtat 168
||||||
Sbjct: 126 aagtat 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 106 ttaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaag 165
|||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggagggag 7
Query: 166 ta 167
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaac 130
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 131 ggagggagta 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
|||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggaa 8
Query: 165 gta 167
|||
Sbjct: 7 gta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatcta 82
||||||||||||||| |||||||||||| | |||||||| ||||||||||| ||||||
Sbjct: 129 tttcacaatataagtcattctagcatttcccacattcata-ttgatgttaatgaatcta 72
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||| |||||||||||||| ||| | || ||||||
Sbjct: 71 tagattcattaacatcaatatgaatgtggaaaatgttagaatgacttata-ttatgaaac 129
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 130 ggaggaagta 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||||||||| |||||| |||||| | |||||||||| ||||||||| |||||||
Sbjct: 128 tttcataatataagtcattctaacattttccacattcatatt-gatgttaatgaatctag 70
Query: 84 a 84
|
Sbjct: 69 a 69
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||| |||||| |||||||| ||| | |||||||||
Sbjct: 59 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttata-ttgtgaaac 117
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 118 ggaggaagta 127
Score = 79.8 bits (40), Expect = 1e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| |||||||||||| || |||||||| ||||||||||| |||||||
Sbjct: 116 tttcacaatataagtcattctagcatttctcacattcata-ttgatgttaatgaatctag 58
Query: 84 atag 87
||||
Sbjct: 57 atag 54
Score = 50.1 bits (25), Expect = 1e-05
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 127 gaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacatt-gtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 114/133 (85%), Gaps = 3/133 (2%)
Strand = Plus / Minus
Query: 35 aagttattctagcatttttcgcattcatatttgatgttaataaatctagatagatatata 94
|||| ||| ||||||||||| ||||||||| ||||||||| |||||| | ||||||
Sbjct: 134 aagtcattttagcatttttcacattcatata-gatgttaatgaatctatgcatatatatg 76
Query: 95 ttttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtga 154
| || |||||||||||||| | |||||||||||||||| || ||||| ||||| ||||||
Sbjct: 75 tctt-gattcattaacatctacatgaatgtgggaaatgctaaaatgacttaca-ttgtga 18
Query: 155 aacggaggaagta 167
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| ||||||||||| ||||| || ||||| || || || ||||||
Sbjct: 88 tagattcattaacatctatatgaatgtgaaaaatgctaaaatgacttgca-ttatgaaac 146
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 147 ggagggagta 156
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 89.7 bits (45), Expect = 1e-17
Identities = 122/144 (84%), Gaps = 4/144 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| ||||||| |||| | |||||||||| ||| |||| |||||||
Sbjct: 16 tttcacaatataagtcattctagtatttcccacattcatatt-gatactaatgaatctag 74
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
||||||||| | ||||| |||| ||||||||||||||||||||||| | |||||| |
Sbjct: 75 atagatatag--tctagatccattggcatcaatatgaatgtgggaaatggtggaatgact 132
Query: 144 tacatttgtgaaacggaggaagta 167
|||| || ||||||||||| ||||
Sbjct: 133 taca-ttatgaaacggagggagta 155
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 73 tagattcattagtatcaatatgaatgtgggaaatactagaatgacttata-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 87.7 bits (44), Expect = 5e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacgg 13
Query: 160 aggaagta 167
||| ||||
Sbjct: 12 agggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
||||||||| ||||||||||||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttaca-ttatgaaacgg 130
Query: 160 aggaagta 167
||| ||||
Sbjct: 131 agggagta 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| |||||||||||| | ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 91/104 (87%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | | |||||||| |||||||||||||||| |||||||||||
Sbjct: 58 gatgttaatgaatctagacacacatatatttctagattcattaacatctatatgaatgtg 117
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagtata 169
|| |||| ||||| | ||||| || ||||||||||||||||||
Sbjct: 118 ggcaatgctagaaagtcttaca-ttatgaaacggaggaagtata 160
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtg 125
|||||||||||||||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 91/104 (87%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | | |||||||| |||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaatctagacacacatatatttctagattcattaacatctatatgaatgtg 46
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagtata 169
|| |||| ||||| | ||||| || ||||||||||||||||||
Sbjct: 45 ggcaatgctagaaagtcttaca-ttatgaaacggaggaagtata 3
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtg 125
|||||||||||||||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgtg 117
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
|||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggaa 8
Query: 165 gta 167
|||
Sbjct: 7 gta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||| ||||| |||||||| ||| | |||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttata-ttgtgaaac 130
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 131 ggagggagta 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatcta 82
||||||||||||||| ||||||||||||| | |||||||| ||||||||||| ||||||
Sbjct: 129 tttcacaatataagtcattctagcattttccacattcata-ttgatgttaatgaatcta 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| |||||||||||| | ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||| |||||||||||||| ||||||| |||||||| ||||| ||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttaca-ttgtgaaacgga 119
Query: 161 ggaagta 167
|||||||
Sbjct: 120 ggaagta 126
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||| |||||||||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacatt-gtgaaacggagggagta 5
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttaca-ttgtgaaacgga 12
Query: 161 ggaagta 167
|||||||
Sbjct: 11 ggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatt 149
|||||||||||||| ||| ||||| |||||||| |||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacatt 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaat 75
||||||||| ||||| ||||||||||||| | ||||||| |||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccatattcata-ttgatgttaat 66
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||| ||||| |||||||| ||||| || ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatactagaatgacttaca-ttatgaaac 15
Query: 158 ggaggaagtat 168
|||||||||||
Sbjct: 14 ggaggaagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| ||||||| |||| || |||||||||| ||||||||| |||||||
Sbjct: 16 tttcataatgtaagtcattctagtatttctcacattcatatt-gatgttaatgaatctag 74
Query: 84 a 84
|
Sbjct: 75 a 75
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 23 atttcacaatataagttattctagcatttttcgcattcatatttg 67
|||||| ||| ||||| |||||||||||| || ||||||||||||
Sbjct: 120 atttcataatgtaagtcattctagcatttctcacattcatatttg 76
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatt 149
|||||||||||| |||||| |||||||| |||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacatt 113
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||| ||||||||||||| |||||| |||||||| ||||| ||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaacgga 12
Query: 161 ggaagta 167
|||||||
Sbjct: 11 ggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| |||||||||||| || ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatatt 57
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||| ||| ||||| |||||||| ||||||| |||||||||||| |||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacatt-gtgaaacggagggagtat 131
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 85.7 bits (43), Expect = 2e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 93 tattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgt 152
||||| || ||||||||||||||||| |||||||||||| |||||||| ||||| ||||
Sbjct: 78 tatttaagtttcattaacatcaatataaatgtgggaaatactagaatgacttaca-ttgt 136
Query: 153 gaaacggaggaagta 167
|||||||||||||||
Sbjct: 137 gaaacggaggaagta 151
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 102 ttcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggag 161
|||||||||||||||||||||||||||||| |||||||| ||| | |||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttata-ttgtgaaacggag 11
Query: 162 gaagtata 169
| ||||||
Sbjct: 10 ggagtata 3
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| ||| ||||| |||||||| ||||| |||||||||
Sbjct: 77 tagattcattaacatcaatatgaatatggaaaatgctagaatgacttaca-ttgtgaaac 135
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 136 ggagggagta 145
Score = 73.8 bits (37), Expect = 7e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| |||||||||||||| |||||| |||||| |||||||| ||||| || ||||||
Sbjct: 73 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttaca-ttatgaaac 15
Query: 158 ggaggaagt 166
|||||||||
Sbjct: 14 ggaggaagt 6
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||| ||||||| |||||||| ||||| || ||||||
Sbjct: 55 tagattcattaacatcaatatgaatgtaggaaatgctagaatgacttaca-ttatgaaac 113
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 114 ggagggagta 123
Score = 50.1 bits (25), Expect = 1e-05
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 128 aaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||| |||||||| ||||||| ||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacatt-gtgaaacggaggaagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 54/63 (85%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| |||||||||||| |||||||||| ||||||||| |||||||
Sbjct: 112 tttcataatgtaagtcattctagcatttcctacattcatatt-gatgttaatgaatctag 54
Query: 84 ata 86
|||
Sbjct: 53 ata 51
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 83.8 bits (42), Expect = 7e-16
Identities = 122/145 (84%), Gaps = 9/145 (6%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| | ||||||||| ||||||||| | | |||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacattcatatc-gatgttaatgagtttag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||||||| |||| | ||||| |||||||||||||| ||| ||||| ||||||||
Sbjct: 75 atagatacatatgtctagat------acatcaatatgaatatggaaaatgctagaatgac 128
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| |||||||||||||||||||
Sbjct: 129 ttaca-ttgtgaaacggaggaagta 152
Score = 73.8 bits (37), Expect = 7e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
||||||||||| |||||||||||| ||||| |||||||| ||||| ||||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttaca-ttgtgaaacggagg 10
Query: 163 aagta 167
||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggaagtat 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||| ||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 64 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaac 122
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 123 ggagggagta 132
Score = 54.0 bits (27), Expect = 7e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| |||||||||||| | |||||||| || ||| |||| |||||||
Sbjct: 121 tttcacaatataagtcattctagcatttcccacattcata-ttaatgctaatgaatctag 63
Query: 84 ata 86
|||
Sbjct: 62 ata 60
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| |||||||||||| | ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||||||||| || ||||| ||||| || ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttaca-ttatgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| | | ||||| |||||||| ||| | ||||| |||
Sbjct: 78 tagattcattaacatcaatatgaatatagtaaatgctagaatgacttata-ttgtggaac 136
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 137 ggaggaagta 146
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||| |||||||||| ||| ||||| | |||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatgttagagtgacttaca-tggtgaaac 120
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 121 ggagggagta 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
|||||| || ||||| | |||| |||||| | |||||||||| ||||||||| |||||||
Sbjct: 119 tttcaccatgtaagtcactctaacattttccacattcatatt-gatgttaatgaatctag 61
Query: 84 atagatat 91
||| ||||
Sbjct: 60 atatatat 53
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 118/140 (84%), Gaps = 3/140 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| || |||||||| ||||||| ||| |||||||
Sbjct: 147 tttcacaatgtaagtcattctagcatttctcacattcata-ttgatgtcaatgaatctag 89
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||| ||| | |||||||| | |||||||||||||| || ||| ||||||||
Sbjct: 88 acatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctagaatgac 29
Query: 143 ttacatttgtgaaacggagg 162
||||| ||||||||||||||
Sbjct: 28 ttaca-ttgtgaaacggagg 10
Score = 83.8 bits (42), Expect = 7e-16
Identities = 118/140 (84%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||| | || |||||||||| || | | |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatntctcacattcatatt-gaaatcgntgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | | |||||| | |||||||||| ||||||||||||||||| |||||| ||||||||
Sbjct: 75 acatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggagg 162
||||| ||||||||||||||
Sbjct: 135 ttaca-ttgtgaaacggagg 153
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||||||||| || ||||| ||||| || ||||||
Sbjct: 78 tagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttaca-ttatgaaac 136
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 137 ggagggagta 146
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| | | ||||| |||||||| ||| | ||||| |||
Sbjct: 73 tagattcattaacatcaatatgaatatagtaaatgctagaatgacttata-ttgtggaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggaagtat 133
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||| ||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 73 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| |||||||||||| | |||||||| || ||| |||| |||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcata-ttaatgctaatgaatctag 74
Query: 84 ata 86
|||
Sbjct: 75 ata 77
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| |||||||||||| | ||||||||||
Sbjct: 121 tttcacaatgtaagtcattctagcatttcccacattcatatt 80
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 83.8 bits (42), Expect = 7e-16
Identities = 89/102 (87%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 40 attctagcatttttcgcattcatatttgatgttaataaatctagatagatatatattt-t 98
||||||||||||| | ||||||||| | ||||||| |||||||| | ||||||| | |
Sbjct: 2 attctagcattttccacattcatatagg-tgttaatgaatctagacatctatatatatct 60
Query: 99 agattcattaacatcaatatgaatgtgggaaatgttagaatg 140
||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaatg 102
Score = 65.9 bits (33), Expect = 2e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 69 tgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtggg 127
||||||| |||||||||| ||||| || | |||||||||||||| | ||||||||||||
Sbjct: 73 tgttaatgaatctagatatatatagatgtctagattcattaacacctatatgaatgtgga 14
Query: 128 aaatgttagaatg 140
||||| |||||||
Sbjct: 13 aaatgctagaatg 1
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||| ||||||||||||||| |||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaatatcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 104 cattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagga 163
|||| |||||||||||||| ||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttaca-ttgtgaaacggagga 138
Query: 164 agtat 168
|||||
Sbjct: 139 agtat 143
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 89/102 (87%), Gaps = 2/102 (1%)
Strand = Plus / Minus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | |||||||| | |||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtg 46
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|| ||| ||||| || ||||| || ||||||||||||||||
Sbjct: 45 ggcaatactagaaagacttaca-ttatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 85/102 (83%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | |||||| | | |||||||||||||||| |||||||| ||
Sbjct: 58 gatgttaatgaatctagacatatatatgtgtctagattcattaacatctatatgaatatg 117
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
| |||| ||||| | ||||| || ||||||||||| ||||
Sbjct: 118 agcaatgctagaaagtcttaca-ttatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 99 agattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacg 158
|||||||||| |||||||||||||||| |||||| |||||||| ||| | ||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttata-ttgtgaaacg 126
Query: 159 gaggaagta 167
|||||||||
Sbjct: 127 gaggaagta 135
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacat 148
|||||| |||||||||||||||| |||||| |||||||| ||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacat 23
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||||||||| |||||||||||| || ||||||||||
Sbjct: 124 tttcacaatataagtcattctagcatttctcacattcatatt 83
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
|||||| || ||||| |||||||||||| || ||||||||||
Sbjct: 16 tttcacgatgtaagtcattctagcatttctcacattcatatt 57
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 99 agattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacg 158
||||||||||| |||||| ||||||||||||||| |||||||| ||| | ||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttata-ttgtgaaacg 126
Query: 159 gaggaagta 167
|||||||||
Sbjct: 127 gaggaagta 135
Score = 58.0 bits (29), Expect = 4e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
||||||| |||||| |||||||| |||||| |||||||| ||| ||| ||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatatt-gtgaaacggagg 10
Query: 163 aagta 167
||||
Sbjct: 9 gagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcattt 51
||||||||||||||| ||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcattt 43
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcattt 51
||||||||||||||| ||||||||||||
Sbjct: 124 tttcacaatataagtcattctagcattt 97
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttaga 137
||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tagattcattaacatcaatatgaatgtgggaaatgttaga 35
Score = 73.8 bits (37), Expect = 7e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttaca-ttgtgaaacggaggaagta 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 56 cattcatatttgatgttaataaatctagatagatat 91
|||||||||| ||||||||| |||||||||||||||
Sbjct: 49 cattcatatt-gatgttaatgaatctagatagatat 83
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtata 169
||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggaagtata 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||| |||||| |||||| | ||||||| |||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacatt-gtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatat 64
||||||||| |||||||||||||||||| || |||||||||
Sbjct: 16 tttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| |||||||||||| | ||||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatatt 78
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 77.8 bits (39), Expect = 5e-14
Identities = 118/144 (81%), Gaps = 14/144 (9%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| || ||| ||||| |||||||||||||||||
Sbjct: 134 tttcacaatgtaagtcattctagcatttctcatatttatatt-gatgttaataaatctag 76
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
|||||| ||| | | ||||||||||||||||||||||| || ||||| |
Sbjct: 75 atagatctatctat------------catcaatatgaatgtgggaaatgctaaaatgact 28
Query: 144 tacatttgtgaaacggaggaagta 167
|||| |||||||||||||||||||
Sbjct: 27 taca-ttgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| |||||||||||||| ||| || |||||| |||||||| ||||| |||||||||
Sbjct: 77 tagatttattaacatcaatataaatatgagaaatgctagaatgacttaca-ttgtgaaac 135
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 136 ggagggagta 145
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 77 aatctagatagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgtta 135
|||||| |||||||||||| | |||||||| |||| || |||||||||||||||||| ||
Sbjct: 68 aatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatgcta 127
Query: 136 gaatgatttacatttgtgaaacggagg 162
|||||| ||||| || |||||||||||
Sbjct: 128 gaatgacttaca-ttatgaaacggagg 153
Score = 58.0 bits (29), Expect = 4e-08
Identities = 119/145 (82%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| |||||||||||| | |||||||| | || |||| | |||||||
Sbjct: 147 tttcataatgtaagtcattctagcatttcccacattcata-tggaggttagtgaatctag 89
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | | |||||||| |||| || |||||||| | ||||||| ||||||||
Sbjct: 88 acatatatatctatatagattcactaacctctatatgaatataggaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| || ||||||||||| ||||
Sbjct: 28 ttaca-ttatgaaacggagggagta 5
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 77.8 bits (39), Expect = 5e-14
Identities = 121/144 (84%), Gaps = 7/144 (4%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| ||| ||||||||| | |||| ||||| |||| |||| |||||||
Sbjct: 141 tttcacaatataagtcattttagcattttccacatttatatt-gatgctaatgaatctag 83
Query: 84 atagatatatattttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
| ||||||| | | |||||||| ||||||| | |||||| |||||| || ||||| |
Sbjct: 82 a--gatatatct---aaattcattagcatcaatgtaaatgtgagaaatgctaaaatgact 28
Query: 144 tacatttgtgaaacggaggaagta 167
|||||| |||||||||||||||||
Sbjct: 27 tacatt-gtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||| ||||||| ||||| || ||||| ||| | |||||||||
Sbjct: 84 tagattcattagcatcaatataaatgtggaaaatgctaaaatgacttata-ttgtgaaac 142
Query: 158 ggaggaagtat 168
||||| |||||
Sbjct: 143 ggagggagtat 153
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 77.8 bits (39), Expect = 5e-14
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||| ||||||||||||||| | ||||| |||||||||||||| ||||||||||||
Sbjct: 81 attcattagcatcaatatgaatgtagaaaatgctagaatgatttaca-ttgtgaaacgga 139
Query: 161 ggaagta 167
|| ||||
Sbjct: 140 gggagta 146
Score = 58.0 bits (29), Expect = 4e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||| ||| || |||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattagcatcaatataaatatgaaaaatactagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtatat 170
||||| |||||||
Sbjct: 14 ggagggagtatat 2
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 5e-14
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
||||||||||| ||||||||||||||||||| ||||| |||||| | ||||| |||||||
Sbjct: 74 tttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttaca-ttgtgaa 17
Query: 156 acggaggaagtatat 170
||||||| |||||||
Sbjct: 16 acggagggagtatat 2
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 108 aacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||| ||| ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttaca-ttgtgaaacggaggaagta 131
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||||||||||||||||| | ||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatatt 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| ||||||||||||| | |||||||||
Sbjct: 120 tttcacaatgtaagtcattctagcattttccatattcatatt 79
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 77.8 bits (39), Expect = 5e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||| |||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| |||||||||||| || ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatatt 57
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 5e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||||||||||||| || ||| ||||| |||||||| ||||| ||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttaca-ttgtgaaacgga 124
Query: 161 ggaagtatatg 171
|||||||||||
Sbjct: 125 ggaagtatatg 135
Score = 48.1 bits (24), Expect = 4e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaat 75
||||||||| ||||| ||||||||||||||| | || ||| |||||||||||
Sbjct: 120 tttcacaatgtaagtcattctagcatttttcacgtttata-ttgatgttaat 70
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 5e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttaca-ttgtgaaacggaggaagta 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||| ||| ||||||||| || ||||| ||||| ||||| |||
Sbjct: 73 tagattcattagcatcaatataaatatgggaaatgctataatgacttaca-ttgtggaac 15
Query: 158 ggaggaagtat 168
||||| |||||
Sbjct: 14 ggagggagtat 4
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 77.8 bits (39), Expect = 5e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| |||||||||||||||||| ||||||||| || ||||| || || |||||||||
Sbjct: 68 tagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca-ttgtgaaac 126
Query: 158 ggaggaagtat 168
|||||||||||
Sbjct: 127 ggaggaagtat 137
Score = 52.0 bits (26), Expect = 3e-06
Identities = 45/50 (90%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 118 tgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||| |||||| | ||||||| |||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacatt-gtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||||||||||||||||||| |||||||| |||||| |||| |||||||
Sbjct: 16 tttcacaatgtaagttattctagcatttttcacattcata-ttgatgctaatgaatctag 74
Query: 84 at 85
||
Sbjct: 75 at 76
Score = 73.8 bits (37), Expect = 7e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| |||||||||||||||| ||||| |||||| | ||||| |||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgaaaaatgctagaataacttaca-ttgtgaaac 15
Query: 158 ggaggaagtatat 170
||||| |||||||
Sbjct: 14 ggagggagtatat 2
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| ||||||||||||| |||| ||||| || ||||| || ||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagacttaca-ttatgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| ||||||||||||| |||| ||||| || ||||| || ||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagacttaca-ttatgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| ||||||||||| | |||| |||||||| ||||| || |||||
Sbjct: 64 tagattcattaacatctatatgaatgtgtgcaatgctagaatgacttaca-ttatgaaat 122
Query: 158 ggaggaagtatatg 171
||||||||||||||
Sbjct: 123 ggaggaagtatatg 136
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 122/146 (83%), Gaps = 3/146 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| | ||||||||| |||| |||| ||| ||
Sbjct: 147 tttcacaatgtaagtcattctagcattttccacattcatata-gatgctaatgaatttaa 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | |||||| | ||||||||||| |||| |||||||| | | ||||||||||||||
Sbjct: 88 acatatatatgcgtatagattcattagcatctatatgaatatagaaaatgttagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagtat 168
||||| |||||||||||||| |||||
Sbjct: 28 ttaca-ttgtgaaacggagggagtat 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 73/82 (89%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 88 atatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttac 146
|||||||| |||| |||||||| |||| |||||||||||| ||||| |||||||| ||||
Sbjct: 79 atatatatgtttaaattcattagcatctatatgaatgtggaaaatgctagaatgacttac 138
Query: 147 atttgtgaaacggaggaagtat 168
| |||||||||||||| |||||
Sbjct: 139 a-ttgtgaaacggagggagtat 159
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 88/102 (86%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 67 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtg 125
||||||||| |||||||||| | | |||| ||||||||||||| |||| |||||||||||
Sbjct: 58 gatgttaatgaatctagatatagacatatgtttagattcattaccatctatatgaatgtg 117
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|| |||| || ||||| ||||| || ||||||||||| ||||
Sbjct: 118 ggcaatgctaaaatgacttaca-ttatgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| ||||| || |||| || | |||||||| ||||| || ||||||
Sbjct: 73 tagattcattaacatctatatgcatatgggtaaggctagaatgacttaca-ttatgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggaggaagtat 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
||||| |||||||| ||||||| ||||| |||||||| ||||||| |||||||||||| |
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacatt-gtgaaacggaggga 8
Query: 165 gta 167
|||
Sbjct: 7 gta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| | |||| ||| ||||| ||||||||| |||
Sbjct: 16 tttcacaatgtaagtcattctagcattttccacatttata-ttgatattaataaatttag 74
Query: 84 atagatat 91
||| ||||
Sbjct: 75 ataaatat 82
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||||||||| |||||||||||| | ||||||||||
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatatt 84
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 88/102 (86%), Gaps = 2/102 (1%)
Strand = Plus / Minus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| |||||||||| | | |||| | |||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaatctagatatagacatatatctagattcattaacatccatatgaatgtg 46
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
| | || |||||||| ||||| || ||||||||||||||||
Sbjct: 45 agcattgctagaatgacttaca-ttatgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 121/145 (83%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| ||||||||| | || ||||||||| ||||||||| |||||||
Sbjct: 16 tttcataatgtaagtcattctagcaatgctcacattcatatg-gatgttaatgaatctag 74
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||| || | ||| | |||||||||||||||| |||||||| | || |||| ||||||||
Sbjct: 75 atatatgtctatatctagattcattaacatctatatgaatataggcaatgctagaatgac 134
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| || ||||||||||| ||||
Sbjct: 135 ttaca-ttatgaaacggagggagta 158
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggaggaagtat 137
Score = 69.9 bits (35), Expect = 1e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
||||| |||||||| ||||||||||||| |||||||| ||||| |||||||||||||| |
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggga 8
Query: 165 gta 167
|||
Sbjct: 7 gta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||||||||| |||||||||||| | ||||||||||
Sbjct: 125 tttcacaatataagtcattctagcatttcccacattcatatt 84
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | |||| ||| ||||| ||||||||| |||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacatttata-ttgatattaataaatttag 74
Query: 84 atagatat 91
||| ||||
Sbjct: 75 ataaatat 82
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 79 tagattcattaacatcaatatgaatgtgagaaatactaaaatgacttaca-ttgtgaaac 137
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 138 ggagggagta 147
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||| ||| |||| || |||||||||| ||||||||| |||||||
Sbjct: 136 tttcacaatgtaagtcattttagtatttctcacattcatatt-gatgttaatgaatctag 78
Query: 84 a 84
|
Sbjct: 77 a 77
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||| |||| || ||||| ||| | |||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttata-ttgtgaaac 120
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 121 ggaggaagta 130
Score = 54.0 bits (27), Expect = 7e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatcta 82
||||||||||||||| ||| ||| ||||| | |||||||| ||||||||||| ||||||
Sbjct: 119 tttcacaatataagtcattttagtattttccacattcata-ttgatgttaatgaatcta 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||||| |||| | ||||| ||||| |||||||||||||| |||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttaca-ttgtgaaacggagggagtat 4
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| | | ||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatagaaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
|||||||||||||||||||| |||||| |||||||| ||| | ||||||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttata-ttgtgaaacggaggaa 135
Query: 165 gtatat 170
||||||
Sbjct: 136 gtatat 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| ||||||| ||||||||||| |||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattttctatattcata-ttgatgttaatgaatctag 74
Query: 84 ata 86
|||
Sbjct: 75 ata 77
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||| ||||||||| ||| ||||| ||||| || ||||| |||||||||
Sbjct: 66 tagattcattaacattaatatgaatatggaaaatgctagaaggacttaca-ttgtgaaac 124
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 125 ggaggaagta 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttaca-ttatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| | ||||||| || |||||||| |||||||
Sbjct: 123 tttcacaatgtaagtccttctagcattttccatattcata-ttaatgttaatgaatctag 65
Query: 84 atagatatatat 95
|| ||||||||
Sbjct: 64 atgaatatatat 53
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||| ||||| ||||||| ||||| || ||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttaca-ttatgaaac 120
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 121 ggaggaagta 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 40 attctagcatttttcgcattcatatttgatgttaataaatctagatagatat 91
|||||| |||||||| |||||||||| ||||||||| |||||||||||||||
Sbjct: 103 attctatcatttttcacattcatatt-gatgttaatgaatctagatagatat 53
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||| |||||||| ||| | |||||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatat 64
||||||||||||||| |||||||||||| | |||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 73.8 bits (37), Expect = 7e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||| |||| |||||||||||| |||||| |||||||| ||||| |||||||||
Sbjct: 70 tagattcattgacataaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaac 128
Query: 158 ggagg 162
|||||
Sbjct: 129 ggagg 133
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
||||||||||||||||| |||||| |||||||| ||||| ||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaacggagg 10
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| |||||||||||| || ||||||||||| |||| ||| |||||||
Sbjct: 127 tttcacaatgtaagtcattctagcatttctcacattcatattt-atgtcaatgaatctag 69
Query: 84 a 84
|
Sbjct: 68 a 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| |||||||||||| || ||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatatt 57
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 73.8 bits (37), Expect = 7e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
|||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttaca-ttgtgaaacggagg 10
Query: 163 aagta 167
||||
Sbjct: 9 gagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 107 taacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagt 166
|||||||||||||||||||| ||||| || ||| | ||||| |||||||||||||| |||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattaca-ttgtgaaacggagggagt 127
Query: 167 a 167
|
Sbjct: 128 a 128
Score = 48.1 bits (24), Expect = 4e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaat 75
||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 16 tttcacaatgtaagtcattttagcattttccacattcatatt-gatgttaat 66
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 73.8 bits (37), Expect = 7e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 102 ttcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggag 161
||||||||||||| ||| ||||||||||||| |||||||| ||| | |||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttaga-ttgtgaaacggag 115
Query: 162 gaagtatat 170
| |||||||
Sbjct: 116 ggagtatat 124
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttaca-ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 121/145 (83%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| ||||||||| | || ||||||||| ||||||||| |||||||
Sbjct: 147 tttcataatgtaagtcattctagcaatgctcacattcatatg-gatgttaatgaatctag 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||| || | ||| | |||||||||||||||| |||||||| | || |||| ||||||||
Sbjct: 88 atatatgtctatgtctagattcattaacatctatatgaatataggcaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| || ||||||||||| ||||
Sbjct: 28 ttaca-ttatgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 89/103 (86%), Gaps = 4/103 (3%)
Strand = Plus / Plus
Query: 67 gatgttaataaatctaga--tagatatatattttagattcattaacatcaatatgaatgt 124
||||||||| |||||||| |||| |||||| | ||||||||||||||| ||||||||||
Sbjct: 58 gatgttaatgaatctagacatagacatatatct-agattcattaacatccatatgaatgt 116
Query: 125 gggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
| | | || |||||||| ||||| || ||||||||||||||||
Sbjct: 117 gagcattgctagaatgacttaca-ttatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
|||||||||||||| |||||||||||| || |||||| |||||||| ||||| || ||||
Sbjct: 56 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttaca-ttatgaa 114
Query: 156 acggaggaagta 167
||||||| ||||
Sbjct: 115 acggagggagta 126
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatattt 66
||||||||||||||| ||||||||||||| | |||| ||||||
Sbjct: 16 tttcacaatataagtcattctagcattttccacatttatattt 58
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||| ||||||| ||||| |||||||| ||| ||| |||||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatatt-gtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| |||||||| |||| |||| |||||||| ||||| || ||||||
Sbjct: 90 tagattcattaacatctatatgaatatgggtaatgctagaatgacttaca-ttatgaaac 148
Query: 158 ggaggaagtata 169
||||| ||||||
Sbjct: 149 ggagggagtata 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||||| ||||| ||||||| |||| |||||||| ||||| || |||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggcaatgctagaatgacttaca-ttatgaaacgga 12
Query: 161 ggaagta 167
|||||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
|||||||||||||||| ||||| ||||||| |||| ||||||||||||||||
Sbjct: 64 tagattcattaacatctatatgcatgtgggcaatgctagaatgatttacatt 115
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| |||| ||||||||||||| |||||||||| | ||||| |||||||||
Sbjct: 90 tagattcattagcatctatatgaatgtgggcaatgttagaaagtcttaca-ttgtgaaac 148
Query: 158 ggaggaagtata 169
||||| ||||||
Sbjct: 149 ggagggagtata 160
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| |||| |||| ||||||||||||| |||| || || | ||||| || ||||||
Sbjct: 73 tagatttattagcatctatatgaatgtgggtaatgctataaagtcttaca-ttatgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 47 tagatacattaacatcaatatgaatgtgggaaatgctagaatga 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 77 tagatacattaacatcaatatgaatgtgggaaatgctagaatga 120
Score = 54.0 bits (27), Expect = 7e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 35 aagttattctagcatttttcgcattcatatttgatgttaataaatctagatagatatat 93
|||| |||||||||||| | |||||||||| ||||||||| ||||||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatatt-gatgttaatgtatctagatagatatat 66
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 71.9 bits (36), Expect = 3e-12
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggaagta 95
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 104 cattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagga 163
||||||||| ||||| |||||| |||||| |||||||| ||||||| |||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacatt-gtgaaacggagga 9
Query: 164 agta 167
||||
Sbjct: 8 agta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||| |||||||||||| || |||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacatttatatt 57
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||||||||||||||||||| |||||||| ||| | |||||||||||||| |||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggagggagtatat 2
Score = 58.0 bits (29), Expect = 4e-08
Identities = 52/57 (91%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 112 tcaatatgaatgtgggaaatgttagaatgatttacatttgtg-aaacggaggaagta 167
||||||||||||||||||||| |||||||| ||| | ||||| ||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaaacggaggaagta 116
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||||||||| |||||||||||| | ||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccacattcatatt 57
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||||||||| |||||||||||| | ||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatatt 63
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 3e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 112 tcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||||| |||||||| ||| | |||||||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggaggaagta 114
Score = 56.0 bits (28), Expect = 2e-07
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||||||||||||| ||||| |||||||| ||| ||| |||||||||||| |||||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatatt-gtgaaacggagggagtatat 2
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||||||||| |||||||||||| | ||||||||||
Sbjct: 103 tttcacaatataagtcattctagcatttcccacattcatatt 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcattt 51
||||||||||||||| ||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||| ||| || |||||| || ||||| ||||| |||||||||
Sbjct: 73 tagattcattagcatcaatataaatatgagaaatgctaaaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtat 168
|||||||||||
Sbjct: 14 ggaggaagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 110 catcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||||||||||||||| ||||| || ||||| ||| | |||||||||||||| |||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttata-ttgtgaaacggagggagtat 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||||||||| ||| ||||||||| | ||||||||||
Sbjct: 128 tttcacaatataagtcattttagcattttccacattcatatt 87
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 69.9 bits (35), Expect = 1e-11
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||||||||||| |||| | ||||| |||||||| ||||| ||||||||||||
Sbjct: 69 attcattaacatcaatatggatgt-gaaaatgctagaatgacttaca-ttgtgaaacgga 12
Query: 161 ggaagta 167
|||||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| |||||||||||| ||| ||||| |||||||| ||||| |||||||||
Sbjct: 63 tagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttaca-ttgtgaaac 121
Query: 158 ggaggaagtat 168
||||| |||||
Sbjct: 122 ggagggagtat 132
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 69.9 bits (35), Expect = 1e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
|||||||||||||||||||||| |||| || ||||| ||||| ||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttaca-ttgtgaaacggaggaa 8
Query: 165 gta 167
|||
Sbjct: 7 gta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaat 79
||||||||| ||||| ||| ||| ||||| | |||||||||| |||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttagtattttccacattcatatt-gatgttaataaat 70
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||| ||||||||||| ||||| |||||||| ||| | || ||||||
Sbjct: 73 tagattcattagcatcagtatgaatgtggaaaatgctagaatgacttata-ttatgaaac 15
Query: 158 ggaggaagtatatg 171
|||||||||||||
Sbjct: 14 agaggaagtatatg 1
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||||||||| || ||||| ||||| || ||||||||||| ||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttaca-ttatgaaacggagggagta 138
Score = 56.0 bits (28), Expect = 2e-07
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||||||||| ||||||||||||| | |||||||| ||||| |||| |||||||
Sbjct: 16 tttcataatataagtcattctagcattttccacattcata-ctgatgctaatgaatctag 74
Query: 84 atag 87
||||
Sbjct: 75 atag 78
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||| | ||| ||||| || ||||| ||||| |||||||||
Sbjct: 62 tagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttaca-ttgtgaaac 120
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 121 ggaggaagta 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||| ||||||||||| | | |||||| ||||||||| |||||||
Sbjct: 119 tttcacaatgtaagtcattttagcatttttcacgtacatatt-gatgttaatgaatctag 61
Query: 84 atagatata 92
|||||||||
Sbjct: 60 atagatata 52
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||| | ||||| ||||| |||||| | ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||||||||||||||||| | || | ||| ||||||||||| ||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacaattata-ttgatgttaatgaatctat 74
Query: 84 atagatata 92
|||||||||
Sbjct: 75 atagatata 83
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 67.9 bits (34), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 110 catcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| |||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 122 tgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||| |||||||||||||| |||| ||||||||| ||||
Sbjct: 63 tgtgggaaatgctagaatgatttaca-ttgtaaaacggagggagta 107
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||||||| |||||||| |||||||| ||||| || ||||||
Sbjct: 68 tagattcattagcatcaatatgaatatgggaaatactagaatgacttaca-ttatgaaac 126
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 127 ggagggagta 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 110 catcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||| || ||||| |||||| | ||||||| |||||||||||||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacatt-gtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| |||||||||| || |||| |||||||| ||||| || ||||||
Sbjct: 73 tagattcattaacatctatatgaatgttggtaatgctagaatgacttaca-ttatgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||||| |||| ||||||| |||| |||||||| ||||| || |||||||||
Sbjct: 93 attcattaacatctatatatatgtgggcaatgctagaatgacttaca-ttatgaaacgga 151
Query: 161 ggaagta 167
|||||||
Sbjct: 152 ggaagta 158
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||| |||||||| ||| | |||||||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggaggaagta 119
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 110 catcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||||| ||||||||| |||||||| ||| | ||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttata-ttgtgaaacgga 12
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||||||||| |||||||||||| | ||||||||||
Sbjct: 108 tttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcattt 51
||||||||||||||| ||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| |||||||||||||| | ||||| ||||| |||||||| ||||| |||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttaca-ttgtgaaac 129
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 130 ggagggagta 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||| | || | ||||| ||||||||||||||||
Sbjct: 128 tttcacaatgtaagtcattctagcattttccacaattatatt-gatgttaataaatctat 70
Query: 84 atagata 90
|||||||
Sbjct: 69 atagata 63
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 121/146 (82%), Gaps = 3/146 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| ||| ||||||||||| |||||| || ||||||| | |||||||
Sbjct: 147 tttcataatgtaagtcattgtagcatttttcacattca-cttggatgttagtgaatctag 89
Query: 84 atagatatatat-tttagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
| | ||||| || ||||||||| ||||||| |||| ||| || |||||| ||||||||
Sbjct: 88 acatatatacatacttagattcactaacatctatatcaatatgagaaatgctagaatgac 29
Query: 143 ttacatttgtgaaacggaggaagtat 168
||||| || ||||||||||| |||||
Sbjct: 28 ttaca-ttatgaaacggagggagtat 4
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatga 141
||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatga 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatga 141
||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 87/102 (85%), Gaps = 2/102 (1%)
Strand = Plus / Minus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| |||||| ||| ||| |||| | |||||||||||||||| | |||||| ||
Sbjct: 105 gatgttaatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatg 46
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|| |||| ||||| | ||||| |||||||||||||||||||
Sbjct: 45 ggcaatgctagaaagtcttaca-ttgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 86/103 (83%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 67 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | || ||| | |||||||||||||||||| ||||| | |||
Sbjct: 58 gatgttaatgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtg 117
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|| ||| ||||| | ||||| |||||||||||||| |||||
Sbjct: 118 ggcaatactagaaagtcttaca-ttgtgaaacggagggagtat 159
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 87/102 (85%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | | |||||| | |||||||||||||||| || ||||||||
Sbjct: 58 gatgttaatgaatctagacacacatatatatctagattcattaacatctatgtgaatgtg 117
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|| ||||||| || | ||||| |||||||||||||| ||||
Sbjct: 118 ggcaatgttaaaaagtcttaca-ttgtgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 86/102 (84%), Gaps = 2/102 (1%)
Strand = Plus / Minus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| |||||||||| |||| | | | |||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtg 46
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
| |||| ||| | | ||||| |||||||||||||| ||||
Sbjct: 45 agcaatgctaggaagtcttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| ||||||||| ||||||||||||| |||| ||||| | ||||| |||||||||
Sbjct: 66 tagatttattaacatctatatgaatgtgggcaatgctagaaagtcttaca-ttgtgaaac 124
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 125 ggaggaagta 134
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||| | ||| ||||| |||||||| ||||| |||||||||
Sbjct: 62 tagattcattaacatcaatatatacgtgaaaaatgctagaatgacttaca-ttgtgaaac 120
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 121 ggaggaagta 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| ||||| ||||||||||||||| | | ||||| ||||||||| |||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttttcacgtatatatt-gatgttaatgaatctag 61
Query: 84 atagatat 91
||||||||
Sbjct: 60 atagatat 53
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 87/102 (85%), Gaps = 2/102 (1%)
Strand = Plus / Minus
Query: 67 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | |||||| | |||||||||||||||||| | |||||||||
Sbjct: 105 gatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtg 46
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|| |||| ||||| | || || || ||||||||||||||||
Sbjct: 45 ggtaatgctagaaagtcttgca-ttatgaaacggaggaagta 5
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 99 agattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacg 158
||||||||||||||| ||||||||||||| |||| |||||||| ||| | || |||||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaatgctagaatgacttata-ttatgaaacg 14
Query: 159 gaggaa 164
||||||
Sbjct: 13 gaggaa 8
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||| ||| ||||||||| ||| |||||||| ||| | |||||||||
Sbjct: 88 tagattcattagtatctataagaatgtgggcaatcctagaatgacttata-ttgtgaaac 146
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 147 ggagggagta 156
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 65.9 bits (33), Expect = 2e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
|||||||||||||||||||||||| || || || ||||| ||||| || |||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttaca-ttatgaaacggagg 10
Query: 163 aagta 167
|||||
Sbjct: 9 aagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||| || |||||||| ||||| ||||||||| |||| ||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttaca-ttgtgaaacagagggagta 123
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 68 tagattcattaacatccatatgaatgtgggcaatgttagaa 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 45 tagattcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
|||||||| |||||||||||||||| |||||| |||||||| |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
||||||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 57 tagattcattagcatcaatatgaatgtgagaaatgctagaatga 100
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 65.9 bits (33), Expect = 2e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| | |||||||||| |||| ||||| | ||||||| |||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtggataatgctagaaagtcttacatt-gtgaaac 15
Query: 158 ggaggaagtatat 170
|||||||||||||
Sbjct: 14 ggaggaagtatat 2
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 65 ttgatgttaataaatctagatagatatatattttagattcattaacatcaatatgaatgt 124
||||| ||||| |||||||||||||||| | |||||||||||| ||||||||||| ||
Sbjct: 22 ttgatattaatgaatctagatagatataa--tctagattcattaatatcaatatgaacgt 79
Query: 125 gggaaatg 132
||||||||
Sbjct: 80 gggaaatg 87
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatg 132
|||||||||||| ||||||||||| ||||||||||
Sbjct: 39 tagattcattaatatcaatatgaacgtgggaaatg 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
||||||||||||||||| ||||| ||||||| |||| ||||| | ||||| |||||||
Sbjct: 75 tttagattcattaacatttatatgtatgtgggcaatgctagaaagtcttaca-ttgtgaa 17
Query: 156 acggaggaagta 167
||||||||||||
Sbjct: 16 acggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| |||| | |||||| |||| |||| ||||| | ||||| |||||||||
Sbjct: 90 tagattcattagcatctaaatgaatttgggcaatgctagaaagtcttaca-ttgtgaaac 148
Query: 158 ggaggaagtat 168
||||| |||||
Sbjct: 149 ggagggagtat 159
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
|||||||||||||||||| ||||| ||||| | |||| ||||| | ||||| |||||||
Sbjct: 88 tttagattcattaacatctatatgtatgtgagcaatgctagaaagtcttaca-ttgtgaa 146
Query: 156 acggaggaagta 167
||||||||||||
Sbjct: 147 acggaggaagta 158
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
||||| |||||||||| |||||| |||||| |||||||| ||| ||| || |||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatatt-gtaaaacggagg 88
Query: 163 aagtatat 170
||||||||
Sbjct: 89 aagtatat 96
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 28 acaatataagttattctagcatttttcgcattcatatt 65
||||||||||| |||||||||||| || |||| |||||
Sbjct: 78 acaatataagtcattctagcatttctcacatttatatt 41
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
|||||| |||||||||| |||||||||||||||| |||||||| |||||||
Sbjct: 76 tagatttattaacatcactatgaatgtgggaaatactagaatgacttacatt 127
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
|||||||||| |||||||||| ||||| |||||||| ||||||| |||||||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacatta-tgaaacggaggaa 8
Query: 165 gta 167
|||
Sbjct: 7 gta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||| ||||||| |||| | |||||||| | |||||||||||||||||
Sbjct: 133 tttcataatgtaagtcattctagtatttcccacattcatagt-gatgttaataaatctag 75
Query: 84 atagatatat 93
||| ||||||
Sbjct: 74 atatatatat 65
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaata 76
||||| ||| ||||| ||||||||||||||| |||||||| |||||||||||
Sbjct: 16 tttcataatgtaagtcattctagcatttttcacattcata-gtgatgttaata 67
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 63.9 bits (32), Expect = 7e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| ||||||| |||| || ||| ||||| |||| |||| |||||||
Sbjct: 16 tttcacaatataagtcattctagtatttctcatatttatatt-gatgataatgaatctag 74
Query: 84 atagatatatat 95
||||||||||||
Sbjct: 75 atagatatatat 86
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||| ||| || ||||| |||||||| ||| | |||||||||
Sbjct: 73 tagattcattatcatcaatataaatatgagaaatactagaatgacttata-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 63.9 bits (32), Expect = 7e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 68 atgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtgg 126
|||||||| |||||||||| |||||| | |||||||||||||||| ||||||||||||
Sbjct: 35 atgttaatgaatctagatatatatatgtgcctagattcattaacatctatatgaatgtgg 94
Query: 127 gaaatgttagaa 138
| |||| |||||
Sbjct: 95 gcaatgctagaa 106
Score = 58.0 bits (29), Expect = 4e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| ||||||| | |||||||| | ||||||||||||||| |||||||||||
Sbjct: 81 gatgttaatgaatctaggcacatatatatatctagattcattaacatatatatgaatgtg 22
Query: 126 ggaaatgttagaa 138
|| |||| |||||
Sbjct: 21 ggcaatgctagaa 9
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtatat 170
|||| ||||||||||||| |||||||| ||||| |||||||||||||| |||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagtatat 2
Score = 58.0 bits (29), Expect = 4e-08
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 120 aatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||||||||||| |||||||| ||||| |||||||||||||| |||||
Sbjct: 103 aatgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagtat 150
Score = 50.1 bits (25), Expect = 1e-05
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
|||| ||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttaca-ttgtgaaacgg 98
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
|||||||| ||||||| ||| |||||||| |||||||||||||| |||||||
Sbjct: 70 tagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||| ||||||||||| ||||||||||||||| ||||| || ||||||||||| ||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttaca-ttatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 62 tttagattcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 102 ttcattaacatcaatatgaatgtgggaaatgttag 136
||||||| |||||||||||||||||||||||||||
Sbjct: 35 ttcattagcatcaatatgaatgtgggaaatgttag 1
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttag 136
|||||| |||| |||||||||||||||||||||||||||
Sbjct: 78 tagatttattagcatcaatatgaatgtgggaaatgttag 116
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatg 132
|||||||||| ||||||||||||||||||||||||
Sbjct: 39 tagattcattgacatcaatatgaatgtgggaaatg 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatg 132
|||||||||| ||||||||||||||||||||||||
Sbjct: 50 tagattcattgacatcaatatgaatgtgggaaatg 84
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 62 tttagattcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 110 catcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttaca-ttgtgaaacggagggagtat 4
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||| ||||| |||||| | ||||| |||||||||||||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttaca-ttgtgaaacggagggagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||||||||||||||||| | ||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatatt 57
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||||||||||||||||| | ||||||||||
Sbjct: 114 tttcacaatgtaagttattctagcattttccacattcatatt 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||| ||||| |||||| | ||||| |||||||||||||| ||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttaca-ttgtgaaacggagggagta 125
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 60.0 bits (30), Expect = 1e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttaca-ttgtgaaacggaggaagta 109
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||| | | ||||||||||| |||| ||||| | ||||| |||||||||
Sbjct: 73 tagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
|||||||||||||||||| ||||| || ||| |||| ||||| | ||||| |||||||
Sbjct: 88 tttagattcattaacatctatatgtatatggacaatgctagaaagtcttaca-ttgtgaa 146
Query: 156 acggaggaagta 167
||||||| ||||
Sbjct: 147 acggagggagta 158
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| ||||||||||||| ||| ||||| | ||||| |||||||||
Sbjct: 90 tagattcattaacatctatatgaatgtgggcaatactagaaagtcttaca-ttgtgaaac 148
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 149 ggagggagta 158
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 60.0 bits (30), Expect = 1e-08
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 121 atgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||||||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttaca-ttgtggaacggaggaagtatat 2
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| ||| ||||||||| || ||||||| |||||| |||| |||||||
Sbjct: 121 tttcacaatataagtcattttagcattttccgtattcata-ttgatgataatgaatctag 63
Query: 84 atagatatat 93
| | ||||||
Sbjct: 62 acatatatat 53
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||||||| || ||||| || ||||| ||| | |||||||||
Sbjct: 64 tagattcattatcatcaatatgaatacggaaaatgctaaaatgacttata-ttgtgaaac 122
Query: 158 ggaggaagt 166
|||||||||
Sbjct: 123 ggaggaagt 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatat 64
||||||||| ||||| |||||||||||| |||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||| ||||| |||||| | ||||| |||||||||||||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttaca-ttgtgaaacggagggagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| ||||||||||||||||||| | ||||||||||
Sbjct: 16 tttcacaatgtaagttattctagcattttccacattcatatt 57
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||| ||||| |||||| | ||||| |||||||||||||| ||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttaca-ttgtgaaacggagggagta 125
Score = 54.0 bits (27), Expect = 7e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||| |||||||||||||||||| | ||||||||||
Sbjct: 114 tttcacaatgtaagttattctagcatttnccacattcatatt 73
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| ||||||||| ||| |||| ||||| | ||||| |||||||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaagtcttaca-ttgtgaaac 148
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 149 ggagggagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 119/145 (82%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||| |||| |||||||||| ||||||||||| ||||||||| ||||||
Sbjct: 147 tttcacaatgtaagactttctagcattgcccgcattcatata-gatgttaatgaatctat 89
Query: 84 atagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttagaatgat 142
||| ||||| | | ||||||||||| |||| || |||||||||| |||| ||||| |
Sbjct: 88 atacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtc 29
Query: 143 ttacatttgtgaaacggaggaagta 167
||||| || ||||||||||||||||
Sbjct: 28 ttaca-ttatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 67 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatg 123
|||||||||||||||||| | ||| |||| |||||||||||||||||| | |||||||
Sbjct: 105 gatgttaataaatctagacatatacatatgtttagattcattaacatctaaatgaatg 48
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| ||||||||| | ||| ||||||| |||| ||||| | ||||||| |||||||
Sbjct: 90 tagatttattaacatctaaatgtatgtgggcaatgctagaaagtcttacatt-gtgaaac 148
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 149 ggagggagta 158
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| ||||||||||||| |||| ||||| | ||||| || ||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttaca-ttatgaaac 130
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 131 ggagggagta 140
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||||| ||||||||||||| |||| || || | |||||| || |||||||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatgctaaaaagttttaca-ttatgaaacgga 135
Query: 161 ggaagtata 169
|| ||||||
Sbjct: 136 gggagtata 144
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 58.0 bits (29), Expect = 4e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 106 ttaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaag 165
||||||||||||| ||| || |||||| || ||||| ||| ||| |||||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatatt-gtgaaacggaggaag 120
Query: 166 tatat 170
|||||
Sbjct: 121 tatat 125
Score = 52.0 bits (26), Expect = 3e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 106 ttaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaag 165
||||||||||||| ||| || |||||| || ||||| ||||| |||||||||||||| ||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttaca-ttgtgaaacggagggag 7
Query: 166 ta 167
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||| ||| ||||||||||||||||| | | |||||||| | |||||||||||||||||
Sbjct: 126 tttcataatgtaagttattctagcattgtccacattcata-tagatgttaataaatctag 68
Query: 84 a 84
|
Sbjct: 67 a 67
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| ||||||||| |||||||||||| |||| |||||| | ||||| || ||||||
Sbjct: 69 tagatttattaacatctatatgaatgtggacaatgctagaataacttaca-ttatgaaac 127
Query: 158 ggaggaagtata 169
||||| ||||||
Sbjct: 128 ggagggagtata 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 118 tgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||| |||| |||||| | ||||||| ||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacatta-tgaaacggaggaagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| || ||||||| ||| |||| | |||||||||||||||| |||||||||||
Sbjct: 58 gatgttaatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtg 117
Query: 126 g 126
|
Sbjct: 118 g 118
Score = 44.1 bits (22), Expect = 6e-04
Identities = 53/62 (85%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | || ||||| | ||| |||||||||||| |||||||| ||
Sbjct: 105 gatgttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatg 46
Query: 126 gg 127
||
Sbjct: 45 gg 44
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||||| ||||||||||||| |||| ||||| | ||||| || |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttaca-ttatgaaacgga 12
Query: 161 ggaagtata 169
|| ||||||
Sbjct: 11 gggagtata 3
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 58.0 bits (29), Expect = 4e-08
Identities = 85/101 (84%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 68 atgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtgg 126
|||||||| |||||| | | ||| |||| |||||||||||||||||| | ||||||||||
Sbjct: 104 atgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgg 45
Query: 127 gaaatgttagaatgatttacatttgtgaaacggaggaagta 167
| |||| ||||| | ||||| ||||||||| |||| ||||
Sbjct: 44 gtaatgctagaaagtcttaca-ttgtgaaacagagggagta 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||||||||| |||| |||||||| ||||||| ||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacatt-gtgaaacggaggaagtat 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||| ||||| ||| | ||||| |||||||| ||| ||| |||||||
Sbjct: 71 tagattcattaacaattatatggatgagagaaatcctagaatgacttatatt-gtgaaac 129
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 130 ggaggaagta 139
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 67 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | |||| | | |||||||||||||||||| |||||||||||
Sbjct: 58 gatgttaatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtg 117
Query: 126 g 126
|
Sbjct: 118 g 118
Score = 54.0 bits (27), Expect = 7e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| |||||||||| | |||| ||||| | ||||| || ||||||
Sbjct: 73 tagattcattaacatctatatgaatgtagacaatgctagaaagtcttaca-ttatgaaac 15
Query: 158 ggaggaagtat 168
|||||||||||
Sbjct: 14 ggaggaagtat 4
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 66 tagattcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 107 taacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagt 166
|||||||||| ||||||||||||||| |||||| | ||| | |||||||||||||| |||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttata-ttgtgaaacggagggagt 6
Query: 167 a 167
|
Sbjct: 5 a 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcattt 51
||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatataagttattctagcattt 43
Score = 56.0 bits (28), Expect = 2e-07
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 127 gaaatgttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||| |||||||| ||||||| ||||||||||||||||||||
Sbjct: 87 gaaatgctagaatgacttacatt-gtgaaacggaggaagtatat 129
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaa 33
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaa 132
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 66 tagattcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| || ||||||| ||| |||| | |||||||||||||||| |||||||||||
Sbjct: 105 gatgttaatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtg 46
Query: 126 g 126
|
Sbjct: 45 g 45
Score = 44.1 bits (22), Expect = 6e-04
Identities = 53/62 (85%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | || ||||| | ||| |||||||||||| |||||||| ||
Sbjct: 58 gatgttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatg 117
Query: 126 gg 127
||
Sbjct: 118 gg 119
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatga 141
|||||||| ||||||||||||||||||||||| || |||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatga 89
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||| |||||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacatt-gtgaaacggagggagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 91 tagattcattaacatctatatgaatgtgggcaatgctagaa 131
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 58 tagattcattaacatctatatgaatgtgggcaatgctagaa 98
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 112 tcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||| || |||||||||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacatt-gtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatt 50
||||||||||||||| |||||||||||
Sbjct: 93 tttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 56.0 bits (28), Expect = 2e-07
Identities = 66/76 (86%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
|||||||||| ||||||| | |||||||||| || || ||||| | ||||||| |||||
Sbjct: 70 tttagattcaataacatctaaatgaatgtggcaa-tgctagaaagtcttacatt-gtgaa 127
Query: 156 acggaggaagtatatg 171
||||||||||||||||
Sbjct: 128 acggaggaagtatatg 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 149 ttgtgaaacggaggaagtatatg 171
|||||||||||||||||||||||
Sbjct: 23 ttgtgaaacggaggaagtatatg 1
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
|||||||||||||||||| ||||| ||||||| |||| ||||| | ||| | |||||||
Sbjct: 66 tttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttata-ttgtgaa 124
Query: 156 acggaggaagta 167
||||||| ||||
Sbjct: 125 acggagggagta 136
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 85 tagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgtta 135
||||||||||| | ||||||||||||||| ||||||||||||| |||||||
Sbjct: 53 tagatatatatgtctagattcattaacatatatatgaatgtgggcaatgtta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatg 132
||||||||||||||| ||||||||||||| ||||
Sbjct: 52 tagattcattaacatatatatgaatgtgggcaatg 86
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
|||||||||||||||||| ||||| ||||||| |||| ||||| | ||| | |||||||
Sbjct: 75 tttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttata-ttgtgaa 17
Query: 156 acggaggaagta 167
||||||| ||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 56.0 bits (28), Expect = 2e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 67 gatgttaataaatctagatagatatatattt-tagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | |||||||| | |||||||||| ||||| |||||||||||
Sbjct: 34 gatgttaatgaatctagacacatatatatgtctagattcatttacatctatatgaatgtg 93
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtggg 127
|||||||||||||||| |||||||||||||
Sbjct: 49 tagattcattaacatctatatgaatgtggg 20
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 54.0 bits (27), Expect = 7e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 121 atgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 129 aatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||| |||||||||||||| |||||||||||||| |||||
Sbjct: 58 aatgctagaatgatttaca-ttgtgaaacggagggagtat 96
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 54.0 bits (27), Expect = 7e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 122 tgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||| ||||| |||||||| ||||||| ||||||||||||||||||
Sbjct: 64 tgtggaaaatgctagaatgacttacatt-gtgaaacggaggaagtat 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||| |||||||| || ||||| ||||||| |||||||||||| ||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacatt-gtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||||| |||| ||||||| ||||||||||
Sbjct: 64 tttagattcattaacatctatatatatgtgggcaatgttagaa 106
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcat 62
||||||||||||||| ||| ||||||||||| |||||||
Sbjct: 126 tttcacaatataagtcattttagcatttttcacattcat 88
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||| |||||||| || || |||||| |||||||| ||| | |||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttata-ttgtgaaac 15
Query: 158 ggagg 162
|||||
Sbjct: 14 ggagg 10
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 107 taacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagt 166
||||||||| ||||||||| ||||| || ||||| ||| ||| ||||||||||||||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatatt-gtgaaacggaggaagt 136
Query: 167 a 167
|
Sbjct: 137 a 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcattt 51
||||||||||||||| ||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 54.0 bits (27), Expect = 7e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| | ||||||||||| || | || || | ||||| |||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttaca-ttgtgaaac 15
Query: 158 ggaggaagtat 168
|||||||||||
Sbjct: 14 ggaggaagtat 4
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 52.0 bits (26), Expect = 3e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
||||| |||||||| |||||| |||| |||||||| || |||| ||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcatt-gtgaaacggaggaa 105
Query: 165 gtatat 170
||||||
Sbjct: 106 gtatat 111
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||| || ||| | ||||||| |||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacatt-gtgaaacggaggaagta 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| ||||| || ||| | ||||||| |||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacatt-gtgaaacggaggaagta 5
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||| ||| ||||||||||||| |||| ||||| | ||||| ||||||||||||
Sbjct: 61 attcattagtatccatatgaatgtgggcaatgctagaaagtcttaca-ttgtgaaacgga 119
Query: 161 ggaagtatat 170
|||||||||
Sbjct: 120 tgaagtatat 129
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| | || |||| ||||| | ||||| || ||||||
Sbjct: 73 tagattcattaacatcaatatgaatataggcaatgctagaaagtcttaca-ttatgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||| |||||||||||| |||| ||||| | ||||| || ||||||
Sbjct: 88 tagattcattaacatttatatgaatgtggacaatgctagaaagtcttaca-ttatgaaac 146
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 147 ggaggaagta 156
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| |||||||| |||| ||| ||||| | ||||| |||||||||
Sbjct: 90 tagattcattaacatctatatgaatatgggcaatactagaaagtcttaca-ttgtgaaac 148
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 149 ggagggagta 158
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| ||||||||| |||||||||||| |||| ||||| | ||||| |||||||||
Sbjct: 72 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttaca-ttgtgaaac 130
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 131 ggagggagta 140
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| | |||||| |||| |||| || || | ||||| |||||||||
Sbjct: 90 tagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttaca-ttgtgaaac 148
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 149 ggaggaagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 84/102 (82%), Gaps = 2/102 (1%)
Strand = Plus / Minus
Query: 67 gatgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | || ||| | ||||||||||||||| || ||||| || ||
Sbjct: 105 gatgttaatgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatg 46
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
| |||| ||||| | ||||| |||||||||||||| ||||
Sbjct: 45 agcaatgctagaaagtcttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 68 atgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtgg 126
|||||||| |||||||| | | |||||| |||||||||||| | ||| ||||||||||||
Sbjct: 59 atgttaatgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgg 118
Query: 127 gaaatg 132
| ||||
Sbjct: 119 gcaatg 124
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||| ||||||||||||| || | ||||| | ||||| || ||||||
Sbjct: 73 tagattcattaacatatatatgaatgtgggcaaggctagaaagtcttaca-ttatgaaac 15
Query: 158 ggaggaagtat 168
||||||||||
Sbjct: 14 cgaggaagtat 4
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||| ||| ||||| || |||| ||| ||||||||| ||||| || ||||||
Sbjct: 73 tagattcattaatatctatatgcatatgggcaatattagaatgacttaca-ttatgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| | |||||||| | |||| ||||| | ||||||| |||||||
Sbjct: 73 tagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacatt-gtgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| ||||| ||||||| |||| ||||| | ||||| || ||||||
Sbjct: 79 tagattcattaacatctatatgtatgtgggcaatgctagaaagtcttaca-ttatgaaac 137
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 138 ggagggagta 147
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtggg 127
|||||||||||||||| |||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtggg 44
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtggg 127
|||||||||||||||| |||||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
||||||||||| |||| ||||||||||||| |||| |||||
Sbjct: 70 tagattcattagcatctatatgaatgtgggcaatgatagaa 110
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatat 64
||||||||||||||| ||| || |||||||| |||||||||
Sbjct: 119 tttcacaatataagtcattttaacatttttcacattcatat 79
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatatttgatgttaataaatctag 83
||||||||||||||| ||| ||||||||||| ||| | | || |||||||| |||||||
Sbjct: 16 tttcacaatataagtcattttagcatttttcatatttaca-ttaatgttaatgaatctag 74
Query: 84 atagatat 91
| ||||||
Sbjct: 75 acagatat 82
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 69 tagattcatttgcatctatatgaatgtgggcaatgttagaa 109
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
||||||| |||||||| ||||||||||||| |||| |||||
Sbjct: 73 tagattcgttaacatctatatgaatgtgggcaatgctagaa 33
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 73 tagattcattgacatatatatgaatgtgggcaatgttagaa 33
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
||||||||||| |||| ||||||||||||| |||| |||||
Sbjct: 90 tagattcattagcatctatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 50.1 bits (25), Expect = 1e-05
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 128 aaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 66 aaatgctagaatgatttaca-ttgtgaaacggagggagtat 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttc 54
||||||||||||||| ||||||| |||||||
Sbjct: 16 tttcacaatataagtcattctagtatttttc 46
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 50.1 bits (25), Expect = 1e-05
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 119 gaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| || || |||||||| ||||||| |||||||||||||||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacatt-gtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgg 126
|||||||||||||||| ||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgg 92
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 50.1 bits (25), Expect = 1e-05
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 127 gaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacatt-gtgaaacggaggaagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 64 tagattcattaacatatatatgaatgtgggtaatgctagaa 104
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttt 52
||||||||||||||| |||||||||||||
Sbjct: 78 tttcacaatataagtcattctagcatttt 50
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 120 aatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||| ||||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacatt-gtgaaacggagggagta 116
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 120 aatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||| ||||||| |||||||| ||||||| ||||||||||| |||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacatt-gtgaaacggagtaagta 89
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 134 tagaatgatttacatttgtgaaacggaggaagtat 168
|||||||| ||||||| ||||||||||||||||||
Sbjct: 37 tagaatgacttacatt-gtgaaacggaggaagtat 4
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
|||| ||||||||||||| ||||| || || | |||| || |||| ||||||| |||||
Sbjct: 67 tttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacatt-gtgaa 125
Query: 156 acggaggaagta 167
||||||||||||
Sbjct: 126 acggaggaagta 137
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
|||| ||||||||||||| ||||| || || | |||| || |||| ||||||| |||||
Sbjct: 75 tttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacatt-gtgaa 17
Query: 156 acggaggaagta 167
||||||||||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 99 agattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||| ||||||||||||| |||| |||||
Sbjct: 91 agattcattaacatatatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||| |||| || ||||| ||||| |||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 121 atgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| |||||||| ||||| || ||||||||||| ||||
Sbjct: 83 atgtgggaaatgctagaatgacttaca-ttatgaaacggagggagta 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||| ||| || |||| |||||| ||||||||||||||| ||| | || ||||||
Sbjct: 73 tagattcactaatttccatataaatgtgagaaatgttagaatgacttata-ttatgaaac 15
Query: 158 ggaggaagta 167
| ||||||||
Sbjct: 14 gaaggaagta 5
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||| ||| ||||||||||||| || | ||||| | ||||| ||||||||| ||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttaca-ttgtgaaacaga 107
Query: 161 ggaagta 167
|||||||
Sbjct: 108 ggaagta 114
