miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40047_ath-MIR169c:mirbase
Length = 411
Score = 365 bits (184), Expect = e-101
Identities = 200/208 (96%)
Strand = Plus / Plus
Query: 204 ctacatagttttagttgannnnnnnncgtacgtaatataatacgaaaaagtatttactta 263
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 204 ctacatagttttagttgattttttttcgtacgtaatataatacgaaaaagtatttactta 263
Query: 264 tttatatatgtgtgttggggcaagaagtgtaaccaagctagcccggcaagtcatctatgg 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttatatatgtgtgttggggcaagaagtgtaaccaagctagcccggcaagtcatctatgg 323
Query: 324 ctatgcaactgtctcttcctctcattctaggcttacgatgacacgtaaaaaatcccaaat 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctatgcaactgtctcttcctctcattctaggcttacgatgacacgtaaaaaatcccaaat 383
Query: 384 atcactaatatgatatgaatatggatga 411
||||||||||||||||||||||||||||
Sbjct: 384 atcactaatatgatatgaatatggatga 411
Score = 278 bits (140), Expect = 3e-75
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 1 tcgtccattatgagtattaattatggttagggaatcttacagaatgaaaatgaaggtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgtccattatgagtattaattatggttagggaatcttacagaatgaaaatgaaggtgtg 60
Query: 61 aatggattgtctcatctaaagccttgaatgtgggaaaaaggccattgttgttcagccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatggattgtctcatctaaagccttgaatgtgggaaaaaggccattgttgttcagccaag 120
Query: 121 gatgacttgccggtagcttg 140
||||||||||||||||||||
Sbjct: 121 gatgacttgccggtagcttg 140
>39836_aly-MIR169c:mirbase
Length = 292
Score = 161 bits (81), Expect = 5e-40
Identities = 127/139 (91%), Gaps = 5/139 (3%)
Strand = Plus / Plus
Query: 230 cgtacgtaatataatacgaaaaagtatttacttatttatatatgtgtgttggggcaagaa 289
|||||||||| |||||||||||||||||||||||||||||| ||||||||| | |||
Sbjct: 158 cgtacgtaatctaatacgaaaaagtatttacttatttatat--gtgtgttggtg--agat 213
Query: 290 gtgtaaccaa-gctagcccggcaagtcatctatggctatgcaactgtctcttcctctcat 348
|||||| ||| || ||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 214 gtgtaaacaaagcaagcccggcaagtcatctctggctatgcaactgcctcttcctctcat 273
Query: 349 tctaggcttacgatgacac 367
|||||||||||||||||||
Sbjct: 274 tctaggcttacgatgacac 292
Score = 141 bits (71), Expect = 5e-34
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 69 gtctcatctaaagccttgaatgtgggaaaaaggccattgttgttcagccaaggatgactt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctcatctaaagccttgaatgtgggaaaaaggccattgttgttcagccaaggatgactt 60
Query: 129 gccggtagctt 139
|||||||||||
Sbjct: 61 gccggtagctt 71
>41965_osa-MIR169b:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccggta 135
|||||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccggta 33
>41373_ptc-MIR169s:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 ttcagccaaggatgacttgccgg 133
|||||||||||||||||||||||
Sbjct: 10 ttcagccaaggatgacttgccgg 32
>41362_ptc-MIR169h:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 ttcagccaaggatgacttgccgg 133
|||||||||||||||||||||||
Sbjct: 9 ttcagccaaggatgacttgccgg 31
>40687_mtr-MIR169j:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccggta 135
|||||||||||||||||||||||
Sbjct: 6 cagccaaggatgacttgccggta 28
>40357_rco-MIR169b:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 ttcagccaaggatgacttgccgg 133
|||||||||||||||||||||||
Sbjct: 4 ttcagccaaggatgacttgccgg 26
>40690_mtr-MIR169m:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 agccaaggatgacttgccggta 135
||||||||||||||||||||||
Sbjct: 7 agccaaggatgacttgccggta 28
>40689_mtr-MIR169l:mirbase
Length = 240
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 agccaaggatgacttgccggta 135
||||||||||||||||||||||
Sbjct: 7 agccaaggatgacttgccggta 28
>40682_mtr-MIR169e:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 agccaaggatgacttgccggta 135
||||||||||||||||||||||
Sbjct: 8 agccaaggatgacttgccggta 29
>40681_mtr-MIR169d:mirbase
Length = 240
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 agccaaggatgacttgccggta 135
||||||||||||||||||||||
Sbjct: 7 agccaaggatgacttgccggta 28
>42760_zma-MIR169r:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 2 cagccaaggatgacttgccgg 22
>42745_zma-MIR169c:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 21 cagccaaggatgacttgccgg 41
>42539_sbi-MIR169k:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgg 21
>42530_sbi-MIR169b:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgg 21
>41979_osa-MIR169p:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 116 cagccaaggatgacttgccgg 96
>41966_osa-MIR169c:mirbase
Length = 112
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccgg 31
>41758_bdi-MIR169f:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 33 cagccaaggatgacttgccgg 53
>41755_bdi-MIR169c:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 33 cagccaaggatgacttgccgg 53
>41619_vvi-MIR169w:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccgg 33
>41615_vvi-MIR169s:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccgg 33
>41612_vvi-MIR169p:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 agccaaggatgacttgccggtagct 138
|||||||||||||||||||| ||||
Sbjct: 13 agccaaggatgacttgccggcagct 37
>41609_vvi-MIR169m:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 agccaaggatgacttgccggtagct 138
|||||||||||||||||||| ||||
Sbjct: 13 agccaaggatgacttgccggcagct 37
>41607_vvi-MIR169k:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccgg 33
>41606_vvi-MIR169j:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccgg 33
>41599_vvi-MIR169c:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccgg 33
>41597_vvi-MIR169a:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccgg 33
>41534_sly-MIR169a:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 41 cagccaaggatgacttgccgg 61
>41361_ptc-MIR169g:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccgg 31
>41360_ptc-MIR169f:mirbase
Length = 239
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccgg 31
>41359_ptc-MIR169e:mirbase
Length = 166
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccgg 31
>41358_ptc-MIR169d:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccgg 31
>41176_aqc-MIR169c:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 5 cagccaaggatgacttgccgg 25
>41113_tcc-MIR169l:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 21 cagccaaggatgacttgccgg 41
>41112_tcc-MIR169k:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 21 cagccaaggatgacttgccgg 41
>41103_tcc-MIR169b:mirbase
Length = 193
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 21 cagccaaggatgacttgccgg 41
>40684_mtr-MIR169g:mirbase
Length = 211
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 6 cagccaaggatgacttgccgg 26
>40452_gma-MIR169d:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 114 agccaaggatgacttgccggt 134
|||||||||||||||||||||
Sbjct: 16 agccaaggatgacttgccggt 36
>40449_gma-MIR169a:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 21 cagccaaggatgacttgccgg 41
>40356_rco-MIR169a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 6 cagccaaggatgacttgccgg 26
>40050_ath-MIR169f:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 114 agccaaggatgacttgccggt 134
|||||||||||||||||||||
Sbjct: 34 agccaaggatgacttgccggt 54
>40046_ath-MIR169b:mirbase
Length = 181
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 43 cagccaaggatgacttgccgg 63
>39839_aly-MIR169f:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 114 agccaaggatgacttgccggt 134
|||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccggt 63
>39835_aly-MIR169b:mirbase
Length = 173
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 cagccaaggatgacttgccgg 133
|||||||||||||||||||||
Sbjct: 46 cagccaaggatgacttgccgg 66
