miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40048_ath-MIR169d:mirbase
Length = 154
Score = 305 bits (154), Expect = 5e-84
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1 gtatcatagagtcttgcatggaaaaattaaagaatgagattgagccaaggatgacttgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtatcatagagtcttgcatggaaaaattaaagaatgagattgagccaaggatgacttgcc 60
Query: 61 gatgttatcaacaaatcttaactgattttggtgtccggcaagttgaccttggctctgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgttatcaacaaatcttaactgattttggtgtccggcaagttgaccttggctctgttt 120
Query: 121 ccttcttttcttttcaatgtcaaactctagatat 154
||||||||||||||||||||||||||||||||||
Sbjct: 121 ccttcttttcttttcaatgtcaaactctagatat 154
>39838_aly-MIR169e:mirbase
Length = 174
Score = 218 bits (110), Expect = 9e-58
Identities = 143/154 (92%)
Strand = Plus / Plus
Query: 1 gtatcatagagtcttgcatggaaaaattaaagaatgagattgagccaaggatgacttgcc 60
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 11 gtatcatagagtcttgcatggaaaaaatagagaatgagattgagccaaggatgacttgcc 70
Query: 61 gatgttatcaacaaatcttaactgattttggtgtccggcaagttgaccttggctctgttt 120
|| |||| ||||||||| || ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 71 gaatttattaacaaatctcaaatgattatggtgcccggcaagttgaccttggctctgttt 130
Query: 121 ccttcttttcttttcaatgtcaaactctagatat 154
|||||| |||||||| ||||||||||||||||||
Sbjct: 131 ccttctcttcttttcgatgtcaaactctagatat 164
>39837_aly-MIR169d:mirbase
Length = 155
Score = 212 bits (107), Expect = 6e-56
Identities = 138/147 (93%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 9 gagtcttgcatggaaaaattaaagaatgagattgagccaaggatgacttgccgatgtt-a 67
||||||| |||||||||| || ||||||||||||||||||||||||||||||||| || |
Sbjct: 9 gagtcttacatggaaaaaatagagaatgagattgagccaaggatgacttgccgattttta 68
Query: 68 tcaacaaatcttaactgattttggtgtccggcaagttgaccttggctctgtttccttctt 127
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 69 tcaacaaatcttaactgattatggtgcccggcaagttgaccttggctctgtttccttctc 128
Query: 128 ttcttttcaatgtcaaactctagatat 154
|||||||| ||||||||||||||||||
Sbjct: 129 ttcttttcgatgtcaaactctagatat 155
>40049_ath-MIR169e:mirbase
Length = 217
Score = 184 bits (93), Expect = 1e-47
Identities = 140/153 (91%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 1 gtatcatagagtcttgcatggaaaaattaaagaatgagattgagccaaggatgacttgcc 60
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 30 gtatcatagagtcttgcatggaaaaatagaa-aatgagattgagccaaggatgacttgcc 88
Query: 61 gatgttatcaacaaatcttaactgattttggtgtccggcaagttgaccttggctctgttt 120
||| || ||||| ||||||| |||||| |||| |||||||||||||| ||||||||||||
Sbjct: 89 gattttctcaacgaatctta-ctgattatggtatccggcaagttgactttggctctgttt 147
Query: 121 ccttcttttcttttcaatgtcaaactctagata 153
||||| |||||||| |||||||||||||||||
Sbjct: 148 ccttcccttcttttcgatgtcaaactctagata 180
>39840_aly-MIR169g:mirbase
Length = 202
Score = 143 bits (72), Expect = 4e-35
Identities = 132/150 (88%), Gaps = 4/150 (2%)
Strand = Plus / Plus
Query: 1 gtatcatagagtcttgcatggaaaaattaaagaatgagattgagccaaggatgacttgcc 60
|||||| || ||||||||||||| | | | |||||||| |||||||||||||||||||||
Sbjct: 24 gtatcagagggtcttgcatggaagagt-agagaatgaggttgagccaaggatgacttgcc 82
Query: 61 ga---tgttatcaacaaatcttaactgattttggtgtccggcaagttgaccttggctctg 117
| | ||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gggttttttaccaatgaatcttaactgattttggtgtccggcaagttgaccttggctctg 142
Query: 118 tttccttcttttcttttcaatgtcaaactc 147
||||||||| |||||||| |||||| ||||
Sbjct: 143 tttccttctcttcttttcgatgtcagactc 172
>40051_ath-MIR169g:mirbase
Length = 379
Score = 109 bits (55), Expect = 6e-25
Identities = 131/154 (85%), Gaps = 8/154 (5%)
Strand = Plus / Plus
Query: 1 gtatcatagagtcttgcatggaaaaattaaagaatgagattgagccaaggatgacttgcc 60
|||||| || ||||||||||||| ||| | |||||||| |||||||||||||||||||||
Sbjct: 105 gtatcagagggtcttgcatggaagaat-agagaatgaggttgagccaaggatgacttgcc 163
Query: 61 ga----tgttatcaacaaatct---taactgattttggtgtccggcaagttgaccttggc 113
| | ||| ||| ||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 164 gggtttttttaccaatgaatctaattaactgattctggtgtccggcaagttgaccttggc 223
Query: 114 tctgtttccttcttttcttttcaatgtcaaactc 147
||||||||||||| ||||||| |||||| ||||
Sbjct: 224 tctgtttccttctcttcttttggatgtcagactc 257
>40284_bna-MIR169m:mirbase
Length = 163
Score = 93.7 bits (47), Expect = 4e-20
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 1 gtatcatagagtcttgcatggaaaaattaaagaatgagattgagccaaggatgacttgcc 60
|||||| |||||| ||||||| ||||| | ||||||| | |||||||| |||||||||||
Sbjct: 6 gtatcagagagtcatgcatgggaaaat-agagaatgataatgagccaaagatgacttgcc 64
Query: 61 gatgttatcaacaaatcttaa-ctgattttggtgtccggcaagttgaccttggctctgtt 119
||| ||| ||| ||| | || ||||| ||||| | ||||||| ||| |||||||||||
Sbjct: 65 gattttaccaaagaatttaaaactgataatggtgactggcaagtcgactttggctctgtt 124
Query: 120 tccttcttttcttttcaatgtcaaactctagatat 154
||||||| |||||||| |||| | |||||||||||
Sbjct: 125 tccttctcttcttttcgatgtaagactctagatat 159
>39839_aly-MIR169f:mirbase
Length = 184
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 taaagaatgagattgagccaaggatgacttgccg 61
||||||||| |||||||||||||||||||||||
Sbjct: 28 taaagaatggaattgagccaaggatgacttgccg 61
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 91 gtgtccggcaagttgaccttggctctgtttccttct 126
||||| ||||||||||||||||||||| ||| ||||
Sbjct: 120 gtgtctggcaagttgaccttggctctgcttcgttct 155
>40050_ath-MIR169f:mirbase
Length = 167
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 91 gtgtccggcaagttgaccttggctctgtttccttct 126
||||| ||||||||||||||||||||| ||| ||||
Sbjct: 111 gtgtctggcaagttgaccttggctctgcttcgttct 146
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 39 attgagccaaggatgacttgccg 61
|||||||||||||||||||||||
Sbjct: 30 attgagccaaggatgacttgccg 52
>41612_vvi-MIR169p:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 39 attgagccaaggatgacttgccg 61
|||||||||||||||||||||||
Sbjct: 9 attgagccaaggatgacttgccg 31
>41608_vvi-MIR169l:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 39 attgagccaaggatgacttgccg 61
|||||||||||||||||||||||
Sbjct: 9 attgagccaaggatgacttgccg 31
>41611_vvi-MIR169o:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 ttgagccaaggatgacttgccg 61
||||||||||||||||||||||
Sbjct: 10 ttgagccaaggatgacttgccg 31
>41368_ptc-MIR169n:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 ttgagccaaggatgacttgccg 61
||||||||||||||||||||||
Sbjct: 10 ttgagccaaggatgacttgccg 31
>41114_tcc-MIR169m:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 ttgagccaaggatgacttgccg 61
||||||||||||||||||||||
Sbjct: 20 ttgagccaaggatgacttgccg 41
>40453_gma-MIR169e:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 ttgagccaaggatgacttgccg 61
||||||||||||||||||||||
Sbjct: 31 ttgagccaaggatgacttgccg 52
>42744_zma-MIR169b:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccgat 63
|||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgat 42
>42743_zma-MIR169a:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccgat 63
|||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgat 42
>42529_sbi-MIR169a:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccgat 63
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgat 22
>41964_osa-MIR169a:mirbase
Length = 173
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccgat 63
|||||||||||||||||||||
Sbjct: 39 agccaaggatgacttgccgat 59
>41614_vvi-MIR169r:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 attgagccaaggatgacttgccgat 63
|||||| ||||||||||||||||||
Sbjct: 9 attgagtcaaggatgacttgccgat 33
>41609_vvi-MIR169m:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 41 tgagccaaggatgacttgccg 61
|||||||||||||||||||||
Sbjct: 11 tgagccaaggatgacttgccg 31
>41106_tcc-MIR169e:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccgat 63
|||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgat 42
>41102_tcc-MIR169a:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccgat 63
|||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgat 42
>40452_gma-MIR169d:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 41 tgagccaaggatgacttgccg 61
|||||||||||||||||||||
Sbjct: 14 tgagccaaggatgacttgccg 34
>40450_gma-MIR169b:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccgat 63
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccgat 32
>40358_rco-MIR169c:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 41 tgagccaaggatgacttgccg 61
|||||||||||||||||||||
Sbjct: 6 tgagccaaggatgacttgccg 26
>40273_bna-MIR169b:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccgat 63
|||||||||||||||||||||
Sbjct: 19 agccaaggatgacttgccgat 39
>40272_bna-MIR169a:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccgat 63
|||||||||||||||||||||
Sbjct: 20 agccaaggatgacttgccgat 40
>40045_ath-MIR169a:mirbase
Length = 226
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccgat 63
|||||||||||||||||||||
Sbjct: 19 agccaaggatgacttgccgat 39
>39834_aly-MIR169a:mirbase
Length = 263
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccgat 63
|||||||||||||||||||||
Sbjct: 28 agccaaggatgacttgccgat 48
>41613_vvi-MIR169q:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 42 gagccaaggatgacttgccg 61
||||||||||||||||||||
Sbjct: 12 gagccaaggatgacttgccg 31
>41610_vvi-MIR169n:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 42 gagccaaggatgacttgccg 61
||||||||||||||||||||
Sbjct: 12 gagccaaggatgacttgccg 31
>41603_vvi-MIR169g:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccga 62
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccga 33
>41602_vvi-MIR169f:mirbase
Length = 184
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccga 62
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccga 33
>41536_sly-MIR169c:mirbase
Length = 147
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccga 62
||||||||||||||||||||
Sbjct: 42 agccaaggatgacttgccga 61
>41373_ptc-MIR169s:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 38 gattgagccaaggatgacttgccg 61
|||| |||||||||||||||||||
Sbjct: 8 gattcagccaaggatgacttgccg 31
>41357_ptc-MIR169c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccga 62
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>41356_ptc-MIR169b:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccga 62
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>41349_ptc-MIR169a:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccga 62
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>41104_tcc-MIR169c:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccga 62
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>40690_mtr-MIR169m:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 42 gagccaaggatgacttgccg 61
||||||||||||||||||||
Sbjct: 6 gagccaaggatgacttgccg 25
>40682_mtr-MIR169e:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 42 gagccaaggatgacttgccg 61
||||||||||||||||||||
Sbjct: 7 gagccaaggatgacttgccg 26
>40679_mtr-MIR169b:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccga 62
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>40678_mtr-MIR169a:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccga 62
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>40451_gma-MIR169c:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 agccaaggatgacttgccga 62
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
