miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 170 bits (86), Expect = 5e-42
Identities = 120/129 (93%), Gaps = 3/129 (2%)
Strand = Plus / Plus
Query: 40 attactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
|||||| |||||||||||||| ||||||||||| ||||||||| |||||| |||||||||
Sbjct: 3 attacttcctccgtttcacaa-tataagtcattctagcattttccacattcatattgatg 61
Query: 100 ttatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
|||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 62 ttat--ctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattg 119
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 120 tgaaacgga 128
Score = 109 bits (55), Expect = 2e-23
Identities = 114/130 (87%), Gaps = 9/130 (6%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| ||||||||||| || ||||| |||||| |||||||||||
Sbjct: 135 tactccctccgtttcacaa-tataagtcattctaacatttcccacattcatattgatgtt 77
Query: 102 a-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| || ||||||| ||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 76 aatgaatctagat-----aacatcaatatgaatgtggaaaatgctagaatgacttatatt 22
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 77.8 bits (39), Expect = 6e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 173 taacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||||||||||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgactta 26
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 72 tcattaacatcaatatgaatgtgggaaatgttagaatgactta 114
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 161 bits (81), Expect = 5e-39
Identities = 116/125 (92%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 45 tccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt-tat 103
|||||||||||||||| | ||||||||| |||||||| ||||||| |||||||||| |||
Sbjct: 8 tccctccgtttcacaa-tgtaagtcattctagcatttctcacattcatattgatgtatat 66
Query: 104 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 163
||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 67 gtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaa 126
Query: 164 acgga 168
|||||
Sbjct: 127 acgga 131
Score = 105 bits (53), Expect = 3e-22
Identities = 112/127 (88%), Gaps = 6/127 (4%)
Strand = Plus / Minus
Query: 45 tccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtta-t 103
|||||||||||||||| | ||||||||| |||||||| ||||||| ||||| |||| | |
Sbjct: 135 tccctccgtttcacaa-tgtaagtcattctagcatttctcacattcatatttatgtcaat 77
Query: 104 g--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 76 gaatctaga--catatacatcaatatgaatgtgagaaatgctagaatgacttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||| ||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttaca 24
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||| |||| |||||||||||| ||||||||||||||||||||
Sbjct: 75 tcattgacataaatatgaatgtgagaaatgctagaatgacttaca 119
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 159 bits (80), Expect = 2e-38
Identities = 117/127 (92%), Gaps = 3/127 (2%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||||||||| || | ||||||||| |||||||| |||||| |||||||||||
Sbjct: 135 tactccctccgtttcataa-tgtaagtcattctagcatttcccacattcatattgatgtt 77
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 --gtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 117 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 128
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattgacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 174 aacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttaca 116
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 159 bits (80), Expect = 2e-38
Identities = 119/130 (91%), Gaps = 4/130 (3%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt- 100
|||| |||||||||||||| | ||||||||| ||||||||| |||| ||||||||||
Sbjct: 140 tacttcctccgtttcacaa-tgtaagtcattctagcattttgtacatacatattgatgta 82
Query: 101 --tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 85.7 bits (43), Expect = 2e-16
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| |||||||| |||||| |||||||||||
Sbjct: 5 tactacctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 102 a-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| || |||||| || ||||||||||| |||| ||||||||||||||||||||||
Sbjct: 64 aatgaatctagacatatatacatcaatatgtatgtacaaaatgctagaatgacttacatt 123
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 124 gtgaaacgga 133
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||| |||||||||||||||||||||
Sbjct: 83 acatcaatatgtatgtacaaaatgctagaatgacttaca 121
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 155 bits (78), Expect = 3e-37
Identities = 118/129 (91%), Gaps = 3/129 (2%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| |
Sbjct: 139 tactccctccgtttcacaa-tataagtcattttagcattttccacattcatattgatgct 81
Query: 102 at--gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
|| |||||||||||||| ||||||||| ||| || ||||||||| ||||||||||||||
Sbjct: 80 atatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattg 21
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 97.6 bits (49), Expect = 6e-20
Identities = 115/131 (87%), Gaps = 7/131 (5%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | |||||||||||||||||| ||| ||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattttagcatttctcatatttatattgatgct 63
Query: 102 a-tg--tctagattcat-taacatcaatatgaatgtgggaaatgctagaatgacttacat 157
| || |||||| ||| || ||||||||||||||||| |||||||| ||||||||| ||
Sbjct: 64 aatgaatctaga--catatagcatcaatatgaatgtggaaaatgctaaaatgacttatat 121
Query: 158 tgtgaaacgga 168
|||||||||||
Sbjct: 122 tgtgaaacgga 132
Score = 63.9 bits (32), Expect = 9e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 176 catcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||||||||| |||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgactta 118
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 155 bits (78), Expect = 3e-37
Identities = 114/124 (91%), Gaps = 4/124 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||| ||||||||| ||||||||||| ||||||||| |||||| |||||||||||
Sbjct: 1 tacttcctctgtttcacaa-tataagtcattatagcattttccacattcatattgatgtt 59
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aa---tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 116
Query: 162 aaac 165
||||
Sbjct: 117 aaac 120
Score = 91.7 bits (46), Expect = 4e-18
Identities = 106/124 (85%), Gaps = 4/124 (3%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||| ||||||||| | ||||||||| |||||||| |||||| |||||||||||
Sbjct: 130 tactccctctgtttcacaa-tgtaagtcattctagcatttcccacattcatattgatgtt 72
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| | || |||||||||||||||||||||| |||||||| ||||||||| ||||||
Sbjct: 71 aa---tgaatctattaacatcaatatgaatgtggaaaatgctataatgacttatattgtg 15
Query: 162 aaac 165
||||
Sbjct: 14 aaac 11
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 67 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 111
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgactta 211
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgactta 22
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 155 bits (78), Expect = 3e-37
Identities = 118/129 (91%), Gaps = 3/129 (2%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||||||||| || | ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcataa-tgtaagtcattctagcatttttcacatttatgttgatgtt 63
Query: 102 at--gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
|| |||||||||||||||||||||||||||||||| ||||| |||||||||||| |||
Sbjct: 64 atatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatta 123
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 124 tgaaacgga 132
Score = 81.8 bits (41), Expect = 4e-15
Identities = 113/131 (86%), Gaps = 7/131 (5%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| ||||||||||| || ||||||||||| || |||||| |||||| |||||||||||
Sbjct: 139 tacttcctccgtttcataa-tataagtcattctaacattttccacattcatattgatgtt 81
Query: 102 a-tg--tctagattcat-taacatcaatatgaatgtgggaaatgctagaatgacttacat 157
| || |||||| ||| ||||||||| || |||||| |||||||||||||||||||||
Sbjct: 80 aatgaatctaga--catataacatcaacataaatgtgaaaaatgctagaatgacttacat 23
Query: 158 tgtgaaacgga 168
| |||||||||
Sbjct: 22 tatgaaacgga 12
Score = 77.8 bits (39), Expect = 6e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 76 tcattaacatcaatatgaatgtggaaaatgttagaatgactta 118
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 173 taacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| || |||||| |||||||||||||||||||||
Sbjct: 64 taacatcaacataaatgtgaaaaatgctagaatgacttaca 24
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 149 bits (75), Expect = 2e-35
Identities = 115/127 (90%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||||||||||||| ||||||||| |||||||| |||||| |||||||||||
Sbjct: 137 tactccctccgtttcacaaag-taagtcattctagcatttcccacattcatattgatgtt 79
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 aataaaagattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 109 bits (55), Expect = 2e-23
Identities = 116/132 (87%), Gaps = 7/132 (5%)
Strand = Plus / Plus
Query: 40 attactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
|||||| |||||||||||||| | ||||||||| |||||||| |||||| |||||||||
Sbjct: 3 attacttcctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattgatg 61
Query: 100 tta-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 156
|| || ||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gtaatgaatct---tttattaacatcaatatgaatgtgggaaatgctagaatgacttact 118
Query: 157 ttgtgaaacgga 168
||||||||||||
Sbjct: 119 ttgtgaaacgga 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttac 212
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttac 117
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaccatcaatatgaatgtgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 149 bits (75), Expect = 2e-35
Identities = 115/127 (90%), Gaps = 6/127 (4%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| ||||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 64 -----tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 162 aaacgga 168
|||||||
Sbjct: 119 aaacgga 125
Score = 99.6 bits (50), Expect = 2e-20
Identities = 110/127 (86%), Gaps = 6/127 (4%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| ||||||||||| |||||| | |||||| |||||||||||
Sbjct: 132 tacttcctccgtttcacaa-tataagtcattctagcatatcccacattcatattgatgtt 74
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| || || | ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 73 aat----gaatc-taaacatcaatatgaatgtggaaaatgctagaatgacttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 174 aacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttaca 24
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 69 tcattaacatcaatatgaatgtgggatatgctagaatgactta 111
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 149 bits (75), Expect = 2e-35
Identities = 115/127 (90%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| |||||||||||||||||||||||||||| || ||||||||
Sbjct: 137 tacttcctccgtttcacaa-tataagtcattttagcatttttcacattcatgttgatgtt 79
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|| | |||||||||||| |||||||| || || ||||||||||||||||||| ||||||
Sbjct: 78 atatgtagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 67.9 bits (34), Expect = 6e-11
Identities = 107/127 (84%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 45 tccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtta-t 103
|||||||||||||||| ||||||||||| |||||||| ||| || |||||||| ||| |
Sbjct: 8 tccctccgtttcacaa-tataagtcattctagcatttctcatatagatattgatattaat 66
Query: 104 g--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| |||| || ||||||||| ||||||||| |||||||| ||||||||| ||||||
Sbjct: 67 gaatctacata---taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtg 123
Query: 162 aaacgga 168
|||||||
Sbjct: 124 aaacgga 130
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 145 bits (73), Expect = 3e-34
Identities = 115/127 (90%), Gaps = 4/127 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||| |||||||||||| | ||||||||||| ||||||| |||||| ||||||||||
Sbjct: 5 tactccatccgtttcacaa-tgtaagtcattttggcattttccacattcatattgatgta 63
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 64 ---tcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtg 120
Query: 162 aaacgga 168
|||||||
Sbjct: 121 aaacgga 127
Score = 89.7 bits (45), Expect = 2e-17
Identities = 112/131 (85%), Gaps = 10/131 (7%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | |||||||||||||||||| |||||| |||||||||||
Sbjct: 134 tacttcctccgtttcacaa-tgtaagtcattttagcatttcccacattcatattgatgtt 76
Query: 102 a-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| || || |||| |||||||||||||||||| |||||| | |||||||||||||
Sbjct: 75 aatgaatcaagat------acatcaatatgaatgtggaaaatgccaaaatgacttacatt 22
Query: 159 gtgaaacggat 169
|||||||||||
Sbjct: 21 gtgaaacggat 11
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 71 tcattaacatcaatatgaatgtgggaaatgctaaaatgacttaca 115
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||| | |||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttaca 24
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 143 bits (72), Expect = 1e-33
Identities = 120/131 (91%), Gaps = 5/131 (3%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||| ||||| |||||||| ||||||| |||||||||||
Sbjct: 141 tactccctccgtttcacaa-tgtaattcattctagcatttctcacattcatattgatgtt 83
Query: 102 a-tg--tcta-gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacat 157
| || || | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aatgaatcaatgattcattaacatcaatatgaatgtgggaaatgctagaatgacttacat 23
Query: 158 tgtgaaacgga 168
|||||||||||
Sbjct: 22 tgtgaaacgga 12
Score = 125 bits (63), Expect = 3e-28
Identities = 120/134 (89%), Gaps = 5/134 (3%)
Strand = Plus / Plus
Query: 39 gattactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
||||||| |||||||||||||| | ||||||||| |||||||| |||||| ||||||||
Sbjct: 2 gattacttcctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattgat 60
Query: 99 gtta-tg--tc-tagattcattaacatcaatatgaatgtgggaaatgctagaatgactta 154
|||| || || | |||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 61 gttaatgaatcattgattcattaacatcaatatgaatgtgagaaatgctagaatgaatta 120
Query: 155 cattgtgaaacgga 168
||||||||||||||
Sbjct: 121 cattgtgaaacgga 134
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 78 tcattaacatcaatatgaatgtgagaaatgctagaatgaattaca 122
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 143 bits (72), Expect = 1e-33
Identities = 117/130 (90%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| |||||||| |||||| ||||| |||||
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattaatgtt 63
Query: 102 a---tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 64 aatatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatatt 123
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 124 gtgaaacgga 133
Score = 133 bits (67), Expect = 1e-30
Identities = 117/130 (90%), Gaps = 4/130 (3%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 140 tactccctccgtttcacaa-tataagtcattctagcatttcccacattcatattgatgtt 82
Query: 102 a-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| || |||| | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 81 aatgaatctatacatattaacattaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 77.8 bits (39), Expect = 6e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 77 tcattaacatcaatatgaatgtgggaaatgctagaatgactta 119
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 141 bits (71), Expect = 5e-33
Identities = 118/130 (90%), Gaps = 4/130 (3%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| ||||||||||| ||||||||| |||||| |||||||||||
Sbjct: 140 tactccctccgtttcacaa-tataagtcattctagcattttccacattcatattgatgtt 82
Query: 102 a-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| || |||| | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 81 aatgaatctatacatattaacattaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 135 bits (68), Expect = 3e-31
Identities = 116/130 (89%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| |||||||| |||||| ||||| |||||
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattaatgtt 63
Query: 102 a---tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| ||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 64 aatatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatatt 123
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 124 gtgaaacgga 133
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 119
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 141 bits (71), Expect = 5e-33
Identities = 118/130 (90%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| |||||||| || ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 102 a-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 64 aatgaatctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacatt 123
Query: 159 gtgaaacgga 168
|||||||||
Sbjct: 124 atgaaacgga 133
Score = 133 bits (67), Expect = 1e-30
Identities = 117/130 (90%), Gaps = 4/130 (3%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| ||||||||||| || | ||||||||| |||||||| || ||| |||||||||||
Sbjct: 140 tacttcctccgtttcataa-tgtaagtcattctagcatttcccatattcatattgatgtt 82
Query: 102 a-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 81 aatgaatctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacatt 22
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatatgggaaatgctagaatgacttaca 24
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 77 tcattaacatcaatatgaatatgggaaatgctagaatgacttaca 121
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 139 bits (70), Expect = 2e-32
Identities = 121/139 (87%), Gaps = 13/139 (9%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| |||||||| |||||| |||||||||||
Sbjct: 149 tactccctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 102 a------------tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatg 149
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 aatgaatctagaatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatg 31
Query: 150 acttacattgtgaaacgga 168
|||||||||||||||||||
Sbjct: 30 acttacattgtgaaacgga 12
Score = 127 bits (64), Expect = 7e-29
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 138
Query: 165 cgga 168
||||
Sbjct: 139 cgga 142
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 86 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 130
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 137 bits (69), Expect = 7e-32
Identities = 116/129 (89%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
||||||||||||||||| || | ||||||||| |||||||| |||||| |||||||||
Sbjct: 139 ttactccctccgtttcataa-tgtaagtcattctagcatttcccacattcatattgatgc 81
Query: 101 ta-tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
|| || | ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 taatgaatcgattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattg 21
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 135 bits (68), Expect = 3e-31
Identities = 115/128 (89%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| |||||||| |||||| ||||||||| |
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattgatgct 63
Query: 102 a-tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
| || | ||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 64 aatgaatcgattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattat 123
Query: 161 gaaacgga 168
||||||||
Sbjct: 124 gaaacgga 131
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 75 tcattagcatcaatatgaatgtgggaaatgctagaatgacttaca 119
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 135 bits (68), Expect = 3e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 95 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 139
Score = 77.8 bits (39), Expect = 6e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 114 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||| || ||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 66 attaatataaatatgaatgtggaaaatgctataatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| |||||||| |||||| |||||||||||
Sbjct: 158 tactccctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattgatgtt 100
Query: 102 a 102
|
Sbjct: 99 a 99
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||| || |||||||||||||||||||||| |||||||||||
Sbjct: 66 attaatataaatatgaatgtggaaaatgctataatgacttaca 24
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 135 bits (68), Expect = 3e-31
Identities = 68/68 (100%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| |||||||| |||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 133 bits (67), Expect = 1e-30
Identities = 120/136 (88%), Gaps = 10/136 (7%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| ||||||||| || |||||||||||| ||
Sbjct: 146 tactccctccgtttcacaa-tgtaagtcattctagcattttccatatttatattgatatt 88
Query: 102 a-tg--------tctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 152
| || |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 87 aatgaatctacatctagattcattaacatcaatatgaatgtgagaaatgctagaatgact 28
Query: 153 tacattgtgaaacgga 168
||||||||||||||||
Sbjct: 27 tacattgtgaaacgga 12
Score = 95.6 bits (48), Expect = 2e-19
Identities = 110/129 (85%), Gaps = 10/129 (7%)
Strand = Plus / Plus
Query: 49 tccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtta-tg--- 104
|||||||||||| | ||||||||| |||||||| ||||||| |||||||||||| ||
Sbjct: 12 tccgtttcacaa-tgtaagtcattctagcatttctcacattcatattgatgttaatgaat 70
Query: 105 -----tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
| |||||||||||| |||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 71 ctagatgtagattcattaatatcaatataaatatggaaaatgctagaatgacttacattg 130
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 131 tgaaacgga 139
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgagaaatgctagaatgacttaca 24
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| |||||||| ||| ||||||||||||||||||||||||
Sbjct: 83 tcattaatatcaatataaatatggaaaatgctagaatgacttaca 127
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 133 bits (67), Expect = 1e-30
Identities = 120/136 (88%), Gaps = 10/136 (7%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| ||||||||| || |||||||||||| ||
Sbjct: 146 tactccctccgtttcacaa-tgtaagtcattatagcattttccatatttatattgatatt 88
Query: 102 a-tg--------tctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 152
| || |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 87 aatgaatctacatctagattcattaacatcaatatgaatgtgagaaatgctagaatgact 28
Query: 153 tacattgtgaaacgga 168
||||||||||||||||
Sbjct: 27 tacattgtgaaacgga 12
Score = 87.7 bits (44), Expect = 6e-17
Identities = 109/129 (84%), Gaps = 10/129 (7%)
Strand = Plus / Plus
Query: 49 tccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtta-tg--- 104
|||||||||||| | ||||||||| |||||||| ||||||| |||||||||||| ||
Sbjct: 12 tccgtttcacaa-tgtaagtcattctagcatttctcacattcatattgatgttaatgaat 70
Query: 105 -----tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
| |||||||||||| |||||||| ||| ||| |||||||| ||||||||||||||
Sbjct: 71 ctagatgtagattcattaatatcaatataaatatggaaaatgctataatgacttacattg 130
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 131 tgaaacgga 139
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgagaaatgctagaatgacttaca 24
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| |||||||| ||| |||||||||||| |||||||||||
Sbjct: 83 tcattaatatcaatataaatatggaaaatgctataatgacttaca 127
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 133 bits (67), Expect = 1e-30
Identities = 114/127 (89%), Gaps = 2/127 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| ||||||||||| |||||||| |||||| |||||||| ||
Sbjct: 136 tacttcctccgtttcacaa-tataagtcattctagcatttcccacattcatattgatatt 78
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| |||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 77 -tatctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 105 bits (53), Expect = 3e-22
Identities = 113/130 (86%), Gaps = 6/130 (4%)
Strand = Plus / Plus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
|||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||| |
Sbjct: 4 ttactccctccgtttcacaa-tgtaagtcattctagcatttcccacatttatattgatat 62
Query: 101 tatgtctagattca--ttaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
|| || ||| | | || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 63 taa---taaatttagataaatatcaatatgaatgtgggaaatgctagaatgacttatatt 119
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 120 gtgaaacgga 129
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||| |||||||| ||||||| ||||||||||||||||||||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttaca 24
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 177 atcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||| ||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgactta 115
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 133 bits (67), Expect = 1e-30
Identities = 115/127 (90%), Gaps = 3/127 (2%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||| |||||||| | ||||||||| |||||||| |||||| ||||| || |
Sbjct: 5 tactccctccatttcacaa-tgtaagtcattctagcatttcccacattcatatt-atat- 61
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtg 121
Query: 162 aaacgga 168
|||||||
Sbjct: 122 aaacgga 128
Score = 83.8 bits (42), Expect = 9e-16
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 123 aatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| || ||||||||||||| ||||||||||||||||||||
Sbjct: 72 tcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 180 aatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||| ||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 133 bits (67), Expect = 1e-30
Identities = 114/127 (89%), Gaps = 2/127 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| |||||||| || ||| |||||||| |
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattctagcatttcccatattcatattgatatc 63
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 64 -tatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtg 122
Query: 162 aaacgga 168
|||||||
Sbjct: 123 aaacgga 129
Score = 101 bits (51), Expect = 4e-21
Identities = 114/131 (87%), Gaps = 8/131 (6%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
|||||||||||||||||||| | ||||||||| || ||||| |||||| ||||||||||
Sbjct: 137 ttactccctccgtttcacaa-tgtaagtcattctaacatttcccacattcatattgatgt 79
Query: 101 ta-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacat 157
|| || ||||||| || |||||||||||| |||||||||||||||||||||||||
Sbjct: 78 taatgaatctagatagat----atcaatatgaatatgggaaatgctagaatgacttacat 23
Query: 158 tgtgaaacgga 168
|||||||||||
Sbjct: 22 tgtgaaacgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 73 tcattaacatcaatatgaatgtgggaaatgttagaatgacttaca 117
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 atcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||| ||| ||||||||||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 131 bits (66), Expect = 4e-30
Identities = 115/129 (89%), Gaps = 3/129 (2%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||| |||||||| | |||||||||||||||||||||||| |||||||||| |
Sbjct: 5 tactccctccatttcacaa-tgtaagtcattttagcatttttcacaattatattgatagt 63
Query: 102 a--tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
| | | |||||| |||||||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 64 atctatatagatttattaacatcaatataattgtggaaaatgctagaatgacttacattg 123
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 124 tgaaacgga 132
Score = 73.8 bits (37), Expect = 9e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| ||||||||| |||| |||||||||||||
Sbjct: 139 tactccctccgtttcacaa-tgtaagtcattctagcattttccacaattatattgatgtt 81
Query: 102 a 102
|
Sbjct: 80 a 80
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 78 attaacatcaatataattgtggaaaatgctagaatgacttaca 120
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 131 bits (66), Expect = 4e-30
Identities = 119/137 (86%), Gaps = 11/137 (8%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||| ||||||||| | ||||||||||||| |||| |||||||||||||||||||
Sbjct: 5 tactccctctgtttcacaa-tgtaagtcattttagtatttgtcacatttatattgatgtt 63
Query: 102 a----------tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 151
| |||||||||||||||||||||||||||||||| ||||| ||| ||||||
Sbjct: 64 aatattaatgttgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgac 123
Query: 152 ttacattgtgaaacgga 168
|||||||||||||||||
Sbjct: 124 ttacattgtgaaacgga 140
Score = 73.8 bits (37), Expect = 9e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||||||| |||| ||||||| |||||||||||
Sbjct: 147 tactccctccgtttcacaa-tgtaagtcattttagtatttctcacattcatattgatgtt 89
Query: 102 a 102
|
Sbjct: 88 a 88
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||| |||| ||| |||||||||||
Sbjct: 84 tcattaacatcaatatgaatgtgagaaatactaaaatgacttaca 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||| |||||| |||| ||| |||||||||||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttaca 24
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 129 bits (65), Expect = 2e-29
Identities = 114/130 (87%), Gaps = 9/130 (6%)
Strand = Plus / Plus
Query: 47 cctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgttat--- 103
||||||||||| || | ||||||||| |||||||| ||||||||||||||||||||
Sbjct: 10 cctccgtttcataa-tgtaagtcattctagcatttctcacatttatattgatgttaataa 68
Query: 104 -----gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 69 atctagtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacatt 128
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 129 gtgaaacgga 138
Score = 109 bits (55), Expect = 2e-23
Identities = 116/136 (85%), Gaps = 9/136 (6%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
|||||||||||||||||||| | ||||||||| ||||||||| || ||| ||||||||||
Sbjct: 146 ttactccctccgtttcacaa-tgtaagtcattctagcattttccatattcatattgatgt 88
Query: 101 tat--------gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 152
|| | ||||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 87 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 28
Query: 153 tacattgtgaaacgga 168
|||||| |||||||||
Sbjct: 27 tacattatgaaacgga 12
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 82 tcattaacatcaatatgaatatggaaaatgctagaatgacttaca 126
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 66 attaacatcaatataaatgtgagaaatgctagaatgacttaca 24
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 129 bits (65), Expect = 2e-29
Identities = 116/133 (87%), Gaps = 10/133 (7%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| ||||||||||| || | ||||||||| ||||||||| |||||| |||||||||||
Sbjct: 5 tacttcctccgtttcataa-tgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 102 a---------tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 152
| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aatgaatctatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgact 123
Query: 153 tacattgtgaaac 165
|||||||||||||
Sbjct: 124 tacattgtgaaac 136
Score = 107 bits (54), Expect = 6e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
Score = 89.7 bits (45), Expect = 2e-17
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 24
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 83 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 127
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 127 bits (64), Expect = 7e-29
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 tatgtttagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 142
Query: 161 gaaacgga 168
||||||||
Sbjct: 143 gaaacgga 150
Score = 125 bits (63), Expect = 3e-28
Identities = 63/63 (100%)
Strand = Plus / Minus
Query: 106 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Query: 166 gga 168
|||
Sbjct: 14 gga 12
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 94 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 138
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 127 bits (64), Expect = 7e-29
Identities = 119/133 (89%), Gaps = 7/133 (5%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcat-tttagcatttttcacatttatattgatgt 100
||||||||||||||||||| | |||||||| |||||||||| |||||| |||||||||
Sbjct: 143 tactccctccgtttcacaa-tgtaagtcatgtttagcatttcccacattcatattgatgc 85
Query: 101 ta-tgt----ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 155
|| ||| |||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 84 taatgtatagctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttac 25
Query: 156 attgtgaaacgga 168
|||||||||||||
Sbjct: 24 attgtgaaacgga 12
Score = 103 bits (52), Expect = 1e-21
Identities = 118/134 (88%), Gaps = 7/134 (5%)
Strand = Plus / Plus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
||||| |||||||||||||| | |||||||||||||||||| |||||| |||||||||
Sbjct: 4 ttacttcctccgtttcacaa-tgtaagtcattttagcatttcccacattcatattgatgc 62
Query: 101 ta-tg--tctag--attcattaacatcaatatgaatgtgggaaatgctaga-atgactta 154
|| || ||||| || ||||| |||||||||||||||||||||||||| | ||||||||
Sbjct: 63 taatgaatctagctatacattagcatcaatatgaatgtgggaaatgctaaacatgactta 122
Query: 155 cattgtgaaacgga 168
||||||||||||||
Sbjct: 123 cattgtgaaacgga 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgggaaatgctaaaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 170 cattaacatcaatatgaatgtggaaaatgctaga-atgacttaca 213
||||| ||||||||||||||||| |||||||| | ||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttaca 124
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 127 bits (64), Expect = 7e-29
Identities = 117/134 (87%), Gaps = 8/134 (5%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | |||| |||| |||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagccattctagcatttcccacattcatattgatgtt 63
Query: 102 a-------tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactta 154
|||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 64 catgaatttgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgactta 123
Query: 155 cattgtgaaacgga 168
||||||||||||||
Sbjct: 124 cattgtgaaacgga 137
Score = 109 bits (55), Expect = 2e-23
Identities = 116/134 (86%), Gaps = 8/134 (5%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| |||||||| |||||| |||||||||||
Sbjct: 144 tacttcctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattgatgtt 86
Query: 102 ---atgtctaga----ttcattaacatcaatatgaatgtgggaaatgctagaatgactta 154
| |||||| ||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 85 cataaatctagacaaattcatgaacatcaatatgaatgtgggaaatgctagaatggctta 26
Query: 155 cattgtgaaacgga 168
||||||||||||||
Sbjct: 25 cattgtgaaacgga 12
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 174 aacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 86 aacatcaatatgaatgtgggaaatgctagaatgacttaca 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||| ||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 68 tcatgaacatcaatatgaatgtgggaaatgctagaatggcttaca 24
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 127 bits (64), Expect = 7e-29
Identities = 119/133 (89%), Gaps = 7/133 (5%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcat-tttagcatttttcacatttatattgatgt 100
||||||||||||||||||| | |||||||| |||||||||| |||||| |||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcatgtttagcatttcccacattcatattgatgc 63
Query: 101 ta-tgt----ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 155
|| ||| |||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 64 taatgtatagctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttac 123
Query: 156 attgtgaaacgga 168
|||||||||||||
Sbjct: 124 attgtgaaacgga 136
Score = 103 bits (52), Expect = 1e-21
Identities = 118/134 (88%), Gaps = 7/134 (5%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
||||| |||||||||||||| | |||||||||||||||||| |||||| |||||||||
Sbjct: 144 ttacttcctccgtttcacaa-tgtaagtcattttagcatttcccacattcatattgatgc 86
Query: 101 ta-tg--tctag--attcattaacatcaatatgaatgtgggaaatgctaga-atgactta 154
|| || ||||| || ||||| |||||||||||||||||||||||||| | ||||||||
Sbjct: 85 taatgaatctagctatacattagcatcaatatgaatgtgggaaatgctaaacatgactta 26
Query: 155 cattgtgaaacgga 168
||||||||||||||
Sbjct: 25 cattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct: 80 tcattagcatcaatatgaatgtgggaaatgctaaaatgacttaca 124
Score = 50.1 bits (25), Expect = 1e-05
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 170 cattaacatcaatatgaatgtggaaaatgctaga-atgacttaca 213
||||| ||||||||||||||||| |||||||| | ||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttaca 24
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 127 bits (64), Expect = 7e-29
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 82 tatgtccagattcattaacatcaatataaacgtgggaaatgctagaatgacttatattgt 141
Query: 161 gaaacgga 168
||||||||
Sbjct: 142 gaaacgga 149
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||| || |||| ||||||||||||||||||
Sbjct: 93 tcattaacatcaatataaacgtgggaaatgctagaatgactta 135
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 7e-29
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 79 tatgtatagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatatggaaaatgctagaatgacttaca 24
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 95 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 139
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 127 bits (64), Expect = 7e-29
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 88 tatgtctagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgt 147
Query: 161 gaaacgga 168
||||||||
Sbjct: 148 gaaacgga 155
Score = 77.8 bits (39), Expect = 6e-14
Identities = 61/68 (89%), Gaps = 4/68 (5%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatca----atatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||| ||||||| || |||||||||||||||||||||||||
Sbjct: 79 tctagattcattaacatcactatgtatgaatatgcgaaatgctagaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 99 tcattaacatcactatgaatgtgggaaatgctagaatgacttaca 143
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||| ||| ||||||||| |||||||| |||||| ||| |||||||
Sbjct: 162 tactccctccgtttcac-aatgtaagtcattctagcatttcccacattcatagtgatgtt 104
Query: 102 a 102
|
Sbjct: 103 a 103
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 127 bits (64), Expect = 7e-29
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 84 tatgtctacattcattaacatcaatatgaatgtgggaaatattagaatgacttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 95 tcattaacatcaatatgaatgtgggaaatattagaatgacttaca 139
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 127 bits (64), Expect = 7e-29
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 141
Query: 161 gaaacgga 168
| ||||||
Sbjct: 142 ggaacgga 149
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 79 tatgtctacattcattaacatcaatatgaatgtagaaaatgctagaatgacttacattgt 20
Query: 161 gaaacgga 168
| ||||||
Sbjct: 19 ggaacgga 12
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtagaaaatgctagaatgacttaca 24
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 93 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 137
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 127 bits (64), Expect = 7e-29
Identities = 67/68 (98%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 79 tatgtctagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 99.6 bits (50), Expect = 2e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 90 tagattcattaatatcaatatgaatgtggaaaatgttagaatgacttacattgtgaaacg 149
Query: 167 ga 168
||
Sbjct: 150 ga 151
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcactatgaatgtgggaaatgctagaatgacttaca 24
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 95 tcattaatatcaatatgaatgtggaaaatgttagaatgacttaca 139
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||| ||| ||||||||| |||||||| |||||| ||| |||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattctagcatttcccacattcatagtgatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 127 bits (64), Expect = 7e-29
Identities = 114/128 (89%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| ||||||||||| || |||| ||||| |||||||||||
Sbjct: 138 tacttcctccgtttcacaa-tataagtcattctactatttcctacattcatattgatgtt 80
Query: 102 a-tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
| | ||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 79 aatatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 103 bits (52), Expect = 1e-21
Identities = 114/130 (87%), Gaps = 6/130 (4%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| ||||||||| | ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattctagcattttctatattcatattgatgtt 63
Query: 102 a-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| || ||||||| |||||||||||||||||||| |||||| |||||||||||| |||
Sbjct: 64 aatgaatctagat--attaacatcaatatgaatgtaggaaatagtagaatgacttatatt 121
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 122 gtgaaacgga 131
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatatagaaaatgctagaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||| | |||| ||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgactta 117
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 125 bits (63), Expect = 3e-28
Identities = 113/127 (88%), Gaps = 2/127 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||||||||| || | ||||||||||||| |||||||| ||| |||||||||
Sbjct: 136 tactccctccgtttcataa-tgtaagtcattttagtatttttcatattcatattgatgac 78
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| |||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||||
Sbjct: 77 -tatctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatatggaaaatgttagaatgacttaca 24
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 119 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||| || |||| ||| ||||||||||||| |||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacgga 129
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| || |||||| || ||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattctaacattttccatattcatattgatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 176 catcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||| || ||||| ||| |||||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttaca 117
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 125 bits (63), Expect = 3e-28
Identities = 119/136 (87%), Gaps = 10/136 (7%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| ||||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 102 a---tgtctagatt------cattaacatcaatatgaatgtgggaaatgctagaatgact 152
| | ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aatgtatctagatatagatacattaacatcaatatgaatgtgggaaatgctagaatgact 123
Query: 153 tacattgtgaaacgga 168
||||||||| ||||||
Sbjct: 124 tacattgtggaacgga 139
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 87.7 bits (44), Expect = 6e-17
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 170 cattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 cattaacatcaatatgaatgtggaaaatgctagaatgacttaca 24
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 170 cattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 84 cattaacatcaatatgaatgtgggaaatgctagaatgacttaca 127
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 125 bits (63), Expect = 3e-28
Identities = 113/127 (88%), Gaps = 2/127 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| ||||||||||| |||||||| |||||| |||||||| ||
Sbjct: 136 tacttcctccgtttcacaa-tataagtcattctagcatttcccacattcatattgatatt 78
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| |||| ||| ||||| |||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 77 -tatctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 113 bits (57), Expect = 1e-24
Identities = 114/130 (87%), Gaps = 6/130 (4%)
Strand = Plus / Plus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
|||||||||||||||||||| | ||||||||| ||||||||| ||||||||||||||| |
Sbjct: 4 ttactccctccgtttcacaa-tgtaagtcattctagcattttccacatttatattgatat 62
Query: 101 tatgtctagattca--ttaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
|| || ||| | | || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 63 taa---taaatttagataaatatcaatatgaatgtgggaaatgctagaatgacttatatt 119
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 120 gtgaaacgga 129
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttaca 24
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 177 atcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||| ||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgactta 115
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 123 bits (62), Expect = 1e-27
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 163 aacgga 168
||||||
Sbjct: 127 aacgga 132
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 76 tcattaacatcaatatgaatatgggaaatgctagaatgacttaca 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 126 atgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 183 atgaatgtggaaaatgctagaatgacttaca 213
|||||| ||| ||||||||||||||||||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 123 bits (62), Expect = 1e-27
Identities = 65/66 (98%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 163 aacgga 168
||||||
Sbjct: 17 aacgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatatgggaaatgctagaatgacttaca 24
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 126 atgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacgga 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 183 atgaatgtggaaaatgctagaatgacttaca 213
|||||| ||| ||||||||||||||||||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttaca 120
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 123 bits (62), Expect = 1e-27
Identities = 114/128 (89%), Gaps = 5/128 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||| ||
Sbjct: 5 tactccctccgtttcacaa-tataagtcattctagcatttcacacattcacattgatatt 63
Query: 102 a-tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
| || ||||||||||| |||||| |||||||||||||||||||||||||||| |||||
Sbjct: 64 aatg---agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgt 120
Query: 161 gaaacgga 168
||||||||
Sbjct: 121 gaaacgga 128
Score = 83.8 bits (42), Expect = 9e-16
Identities = 109/128 (85%), Gaps = 5/128 (3%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| ||||||||||| |||||||| |||||| | |||||| ||
Sbjct: 135 tacttcctccgtttcacaa-tataagtcattctagcatttcccacattcacattgatatt 77
Query: 102 atgtctagat-tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
| | || ||||||| |||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 76 aa---tgaatctcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 72 tcattaatatcaatgtgaatgtgggaaatgctagaatgactta 114
Score = 54.0 bits (27), Expect = 8e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
||||||| |||||| |||||||| ||||||||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgactta 26
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 123 bits (62), Expect = 1e-27
Identities = 94/104 (90%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 65 aagtcattttagcatttttcacatttatattgatgttatgtctagattcattaacatcaa 124
|||||||| || ||||| |||||||| | ||||||| ||||||||||||||||||||
Sbjct: 112 aagtcattctaacatttcccacatttacagtgatgtt---tctagattcattaacatcaa 56
Query: 125 tatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 89.7 bits (45), Expect = 2e-17
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 24
Score = 79.8 bits (40), Expect = 1e-14
Identities = 110/130 (84%), Gaps = 10/130 (7%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| ||||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 102 -atg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
||| |||||| ||||||| | | ||||||||||||| ||||||||||| ||||
Sbjct: 64 aatgaatctaga------aacatcactgtaaatgtgggaaatgttagaatgacttccatt 117
Query: 159 gtgaaacgga 168
|||||||||
Sbjct: 118 atgaaacgga 127
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 123 bits (62), Expect = 1e-27
Identities = 118/132 (89%), Gaps = 6/132 (4%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| |||||||| ||||||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattctagcatttctcacattcatattgatatt 63
Query: 102 a-tg--tctagatt--cattaacatcaatatgaatgtgggaaatgctagaatgacttaca 156
| || ||||||| |||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 64 aatgaatctagatatccattgacatcaatatgaatatgggaaatgctagaatgacttaca 123
Query: 157 ttgtgaaacgga 168
||||||||||||
Sbjct: 124 ttgtgaaacgga 135
Score = 119 bits (60), Expect = 2e-26
Identities = 115/132 (87%), Gaps = 6/132 (4%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| |||||||| || ||| ||||||||||
Sbjct: 142 tacttcctccgtttcacaa-tgtaagtcattctagcatttcccatattcatattgatgtc 84
Query: 102 a-----tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 156
| | |||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 83 aatggatatctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttaca 24
Query: 157 ttgtgaaacgga 168
||||||||||||
Sbjct: 23 ttgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaatatcaatatgaatgtgagaaatgctagaatgacttaca 24
Score = 63.9 bits (32), Expect = 9e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 170 cattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||| |||||||||||||| ||| ||||||||||||||||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttaca 123
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 121 bits (61), Expect = 4e-27
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 104 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 163
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 87 gtctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaa 146
Query: 164 acgga 168
|||||
Sbjct: 147 acgga 151
Score = 89.7 bits (45), Expect = 2e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 139
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||| |||||||||||| |||| |||||||||||| |||||||||||||| ||||||||
Sbjct: 79 tatgcctagattcattagcatctatatgaatgtggacaatgctagaatgacatacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
|||||||||||||||||||| | ||||||||| ||||||||| |||||| ||||||||||
Sbjct: 159 ttactccctccgtttcacaa-tgtaagtcattctagcattttccacattcatattgatgt 101
Query: 101 ta 102
||
Sbjct: 100 ta 99
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| |||| ||||||||||||| |||||||||||||| ||||
Sbjct: 68 tcattagcatctatatgaatgtggacaatgctagaatgacataca 24
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 121 bits (61), Expect = 4e-27
Identities = 111/127 (87%), Gaps = 8/127 (6%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| |||||||| |||||| |||| ||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattctagcatttcccacattcatatcgatgtt 63
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| | ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 64 a-------actcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtg 116
Query: 162 aaacgga 168
|||||||
Sbjct: 117 aaacgga 123
Score = 99.6 bits (50), Expect = 2e-20
Identities = 53/54 (98%)
Strand = Plus / Minus
Query: 115 ttaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttaca 111
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 172 ttaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 55 tatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattat 114
Query: 161 gaaacgga 168
||||||||
Sbjct: 115 gaaacgga 122
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 170 cattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgacttaca 110
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| ||||||||||| || | ||||||||| |||||||| |||||| |||||||||||
Sbjct: 129 tacttcctccgtttcataa-tgtaagtcattctagcatttcccacattcatattgatgtt 71
Query: 102 a 102
|
Sbjct: 70 a 70
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 79 tatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 90 tagatttattaacatcaatataaatgtg--aaatgctagaatgacttacattgtgaaacg 147
Query: 167 ga 168
||
Sbjct: 148 ga 149
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatatgggaaatgcttgaatgacttaca 24
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/43 (93%), Gaps = 2/43 (4%)
Strand = Plus / Plus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 97 attaacatcaatataaatgtg--aaatgctagaatgacttaca 137
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||| ||| ||||||||| ||||||| || ||| |||||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 79 tatgtctagattcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 88 tctagattcattaactaatatatgaatgtgagaaatgctagaatgacttacattgtgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| |||||||||||||||| ||||| ||||||||||||||
Sbjct: 68 tcattaatatcaatatgaatgtgggaaatgatagaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
||||||||||||||||| ||| ||||||||| || ||||| |||||| ||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattctatcatttcccacattcatattgat 60
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatat 94
|||| |||||||||||| ||| ||||||||| |||||||| ||||||| ||||
Sbjct: 158 tacttcctccgtttcac-aatgtaagtcattctagcatttctcacattcatat 107
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 181 atatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| ||||||||||||||||||||
Sbjct: 107 atatgaatgtgagaaatgctagaatgacttaca 139
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||| ||||||||| |||||||||||| ||| ||||||||| |||||||||
Sbjct: 88 tctagattcattaccatcaatattaatgtgggaaattctaaaatgacttagattgtgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacgtcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||| ||| ||||||||| |||||||| |||||| ||||||| |||
Sbjct: 5 tacttcctccgtttcac-aatgtaagtcattctagcatttcccacattcatattgacgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |
Sbjct: 84 tatgtctagattcattaccatcaatatgaatgtgggaaatggtggaatgacttacattat 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacaacaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||||| ||||| | ||||||||||||
Sbjct: 95 tcattaccatcaatatgaatgtgggaaatggtggaatgacttaca 139
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 84 tatgtctagattcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 83.8 bits (42), Expect = 9e-16
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||| | |||||||||||||| || ||||||||||||||||||||||
Sbjct: 79 tatgtctagattcancgatttcaatatgaatgtgaganatgctagaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 95 tcattgacatcaatatgaatgtgagaaatgctagaatgacttaca 139
Score = 63.9 bits (32), Expect = 9e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 45 tccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
|||||||||||||| ||| ||||||||| |||||||| ||||||| ||||||||||
Sbjct: 155 tccctccgtttcac-aatgtaagtcattctagcatttctcacattcatattgatgt 101
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 45 tccctccgtttcacaaatataagtcattttagcatttttcacatttatattga 97
|||||||||||||| ||| ||||||||| |||||| | ||||||| |||||||
Sbjct: 8 tccctccgtttcac-aatgtaagtcattctagcatntctcacattcatattga 59
Score = 50.1 bits (25), Expect = 1e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 178 tcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||| | ||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttaca 24
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 79 tatgtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 83.8 bits (42), Expect = 9e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||| ||||||||||||||| |||||||||||||||||| |||||| ||||
Sbjct: 90 tagattcattaatatcaatatgaatgtgaaaaatgctagaatgacttatattgtggaacg 149
Query: 167 ga 168
||
Sbjct: 150 ga 151
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 95 tcattaatatcaatatgaatgtgaaaaatgctagaatgactta 137
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| |||||||| ||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattctagcatttcccacatttatattggtgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacaccaatataaatgtgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 79 tatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/64 (89%), Gaps = 7/64 (10%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 80 tctagattcattaacatcaatatgaa-------aatgctagaatgacttacattgtgaaa 132
Query: 165 cgga 168
||||
Sbjct: 133 cgga 136
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatgttagaatgacttaca 24
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 192 gaaaatgctagaatgacttaca 213
||||||||||||||||||||||
Sbjct: 103 gaaaatgctagaatgacttaca 124
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 79 tatgtctagattcattaatatcaatatgaatgtgggaaatgttagaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 88 tctagattcattaaaatcaatatgaatgtgaaaaatactagaatgacttacattgtgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| |||||||||||||||| ||||| ||||||||||||||
Sbjct: 68 tcattaatatcaatatgaatgtgggaaatgttagaatgacttaca 24
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| ||||||||||||||| ||||| |||||||||||||||
Sbjct: 95 tcattaaaatcaatatgaatgtgaaaaatactagaatgacttaca 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
||||||||||||||||| ||| ||||||||| || ||||| |||||| ||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattctaacatttcccacattcatattgat 60
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 84 tatgtctagattcattaacattaatatgaatgtgagaaatgctagaatgacttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 101 bits (51), Expect = 4e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 106 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaac 15
Query: 166 gga 168
|||
Sbjct: 14 gga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 40 attactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||||||||||||| ||| ||||||||| |||||||| ||||||| ||||| |||
Sbjct: 160 attactccctccgtttcac-aatgtaagtcattctagcatttctcacattcatattaatg 102
Query: 100 tta 102
|||
Sbjct: 101 tta 99
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 95 tcattaacattaatatgaatgtgagaaatgctagaatgacttaca 139
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 68 tcattaacatccatatgaatatgggtaatgctagaatgacttaca 24
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 82 tatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgt 141
Query: 161 gaaacgga 168
||||||||
Sbjct: 142 gaaacgga 149
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 71 tagatttattaacatcaatataaatgtg--aaatgctagaatgacttacattgtgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 93 tcattaacatcaatatgaatatgggaaatgcttgaatgacttaca 137
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/43 (93%), Gaps = 2/43 (4%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 64 attaacatcaatataaatgtg--aaatgctagaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||| ||| ||||||||| ||||||| || ||| |||||||||||
Sbjct: 156 tactccctccgtttcac-aatgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 102 a 102
|
Sbjct: 97 a 97
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 78 tatgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgacttatattgt 137
Query: 161 gaaacgga 168
||||||||
Sbjct: 138 gaaacgga 145
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 89 tcattagcatcaatatgaatgtaggaaatgctagaatgactta 131
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 79 tatgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 115 bits (58), Expect = 3e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 110 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 140
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 85 tcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||| ||||| ||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacattaatataaatgtgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 79 tatgtctagattcattaacatcaatatgaatgtgggtaatgctataatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 88 tctagattcattaacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggtaatgctataatgacttaca 24
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 95 tcattaacattaatatgaatgtgggaaatgctaaaatgactta 137
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 84 tatgtctagattcattaacaacaatatgaatgtgggaaatactagaatgacttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatggatgtggaaaatgctagaatgacttaca 24
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| |||||||||||||| |||| |||||||||||||||
Sbjct: 95 tcattaacaacaatatgaatgtgggaaatactagaatgacttaca 139
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 117 bits (59), Expect = 7e-26
Identities = 111/127 (87%), Gaps = 6/127 (4%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| |||||||| |||||| |||||||| |
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattgatat- 62
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 63 ----ctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtg 118
Query: 162 aaacgga 168
|||||||
Sbjct: 119 aaacgga 125
Score = 99.6 bits (50), Expect = 2e-20
Identities = 112/130 (86%), Gaps = 12/130 (9%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| ||||||||||| |||||||| |||||| ||||| ||| |
Sbjct: 132 tactccctccgtttcacaa-tataagtcattctagcatttcccacattcatattaatgct 74
Query: 102 a-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| || ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aatgaatctagat--------atcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 21 gtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 177 atcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||| ||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttaca 24
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 69 tcattagcattaatatgaatgtgggaaatgctagaatgactta 111
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 117 bits (59), Expect = 7e-26
Identities = 112/127 (88%), Gaps = 2/127 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||| ||| ||| |||| ||| ||| ||||||||| |
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtaattctagtatttctcatattcatattgatgct 63
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 64 a-gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatg 122
Query: 162 aaacgga 168
|||||||
Sbjct: 123 aaacgga 129
Score = 67.9 bits (34), Expect = 6e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 119 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||| || ||||| ||||||| |||||||||||||||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||| ||| |||| |||||||||||||||
Sbjct: 73 tcattagcatcaatatgaatatgggaaatactagaatgacttaca 117
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 117 bits (59), Expect = 7e-26
Identities = 111/127 (87%), Gaps = 6/127 (4%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| |||||||| |||||| |||||||| |
Sbjct: 132 tacttcctccgtttcacaa-tgtaagtcattctagcatttcccacattcatattgatat- 75
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 74 ----ctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 99.6 bits (50), Expect = 2e-20
Identities = 112/130 (86%), Gaps = 12/130 (9%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| ||||||||||| |||||||| |||||| ||||| ||| |
Sbjct: 5 tactccctccgtttcacaa-tataagtcattctagcatttcccacattcatattaatgct 63
Query: 102 a-tg--tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| || ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aatgaatctagat--------atcaatatgaatgtgggaaatgctagaatgacttacatt 115
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 116 gtgaaacgga 125
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 177 atcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||| ||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttaca 113
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 68 tcattagcattaatatgaatgtgggaaatgctagaatgactta 26
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 117 bits (59), Expect = 7e-26
Identities = 110/127 (86%), Gaps = 10/127 (7%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||| | ||||||||||||| |||||| |||||||||||
Sbjct: 128 tactccctccgtttcacaa-tgtaatttattttagcattttccacattcatattgatgtt 70
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|| ||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 69 at---------cattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 91.7 bits (46), Expect = 4e-18
Identities = 108/127 (85%), Gaps = 10/127 (7%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||||||||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattttagcattttccacattcatattgatgtt 63
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| || |||||||||||||||||||| |||||||| ||| | ||||||||||
Sbjct: 64 a-------at--gataacatcaatatgaatgtggaaaatgctaaaataaattacattgtg 114
Query: 162 aaacgga 168
|||||||
Sbjct: 115 aaacgga 121
Score = 83.8 bits (42), Expect = 9e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 168 atcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 69 atcattaacatcaatatgaatgtggaaaatgctaaaatgacttaca 24
Score = 58.0 bits (29), Expect = 5e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 173 taacatcaatatgaatgtggaaaatgcta 201
|||||||||||||||||||||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgcta 97
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 117 bits (59), Expect = 7e-26
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 78 atgtctagattcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 115 bits (58), Expect = 3e-25
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 80 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattatga 139
Query: 163 aacgga 168
||||||
Sbjct: 140 aacgga 145
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 89 tcattgacatcaatatgaatgtgggaaatgctagaatgacttaca 133
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||| |||||||||||||||||| ||||| ||||||||||||||
Sbjct: 68 tcattgacatcaatatgaatgtgggaaatgatagaatgacttaca 24
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 117 bits (59), Expect = 7e-26
Identities = 112/127 (88%), Gaps = 7/127 (5%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| ||||||||| || ||| |||||||||||
Sbjct: 131 tacttcctccgtttcacaa-tgtaagtcattctagcattttccatattcatattgatgtt 73
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 72 -----tagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 109 bits (55), Expect = 2e-23
Identities = 111/127 (87%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||| ||| ||||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagttattctagcattttccacattcatattgatgtt 63
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||| | || | ||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 64 atg-----aatc-taaacatcaatatgaatatggaaaatgctagaatgacttacattgtg 117
Query: 162 aaacgga 168
|||||||
Sbjct: 118 aaacgga 124
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 173 taacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaataacttaca 24
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 174 aacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttaca 112
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 115 bits (58), Expect = 3e-25
Identities = 113/128 (88%), Gaps = 5/128 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||| ||||||| | | ||||||||| |||||||| ||||||| ||||||||| |
Sbjct: 5 tactccctctgtttcacga-tgtaagtcattctagcatttctcacattcatattgatgct 63
Query: 102 a-tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
| || |||||||||| |||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 64 aatg---agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgt 120
Query: 161 gaaacgga 168
||||||||
Sbjct: 121 gaaacgga 128
Score = 103 bits (52), Expect = 1e-21
Identities = 110/126 (87%), Gaps = 5/126 (3%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
||||| |||||||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct: 136 ttacttcctccgtttcacaa-tataagtcattctagcatttctcacattcatattgatgc 78
Query: 101 tatgtctagat-tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
|| | || |||||| |||||||||||||||| |||||||||||||||||||||| |
Sbjct: 77 taa---tgaatctcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcg 21
Query: 160 tgaaac 165
||||||
Sbjct: 20 tgaaac 15
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttaca 24
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 72 tcattagcatcaatatgaatgtgagaaatgctagaatgactta 114
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 115 bits (58), Expect = 3e-25
Identities = 61/62 (98%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
Score = 89.7 bits (45), Expect = 2e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 117
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacatctatatgaatgtgggaaatgctagaatgacttaca 24
Score = 58.0 bits (29), Expect = 5e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 181 atatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||| ||||||||||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttaca 105
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 113 bits (57), Expect = 1e-24
Identities = 117/137 (85%), Gaps = 10/137 (7%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg- 99
|||||||||||||||||||| | ||| ||||||||||||||| |||||||||||||||
Sbjct: 147 ttactccctccgtttcacaa-tgtaaatcattttagcattttctacatttatattgatgc 89
Query: 100 --------ttatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 151
||| ||||||||||||| |||||||||||||||| |||||||||||| ||
Sbjct: 88 taatgaatttagatctagattcattagcatcaatatgaatgtgaaaaatgctagaataac 29
Query: 152 ttacattgtgaaacgga 168
|||||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 85.7 bits (43), Expect = 2e-16
Identities = 114/136 (83%), Gaps = 10/136 (7%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||| ||| |||||||||||||||| ||||||||| |
Sbjct: 5 tactccctccgtttcacaa-tgtaagttattctagcatttttcacattcatattgatgct 63
Query: 102 a-tg--------tctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 152
| || |||| |||||||| ||||||||| ||||| | |||||||| ||||| |
Sbjct: 64 aatgaatctagatctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatt 123
Query: 153 tacattgtgaaacgga 168
||||||||||||||||
Sbjct: 124 tacattgtgaaacgga 139
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| |||||||||||||||| ||||||||||||| |||||||
Sbjct: 68 tcattagcatcaatatgaatgtgaaaaatgctagaataacttaca 24
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 113 bits (57), Expect = 1e-24
Identities = 119/139 (85%), Gaps = 13/139 (9%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||| ||||||||| | ||||||||| |||||||| ||||||| |||||||||||
Sbjct: 149 tactccctcggtttcacaa-tgtaagtcattctagcatttctcacattcatattgatgtt 91
Query: 102 a---------tgtc---tagattcattaacatcaatatgaatgtgggaaatgctagaatg 149
| |||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 90 aatgaaactatgtcacatagattcattaacatcaatatgaatgtggaaaatgctagaatg 31
Query: 150 acttacattgtgaaacgga 168
||||||||| |||||||||
Sbjct: 30 acttacattatgaaacgga 12
Score = 101 bits (51), Expect = 4e-21
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 111 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaac 139
Score = 89.7 bits (45), Expect = 2e-17
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 24
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 86 tcattaacatcaatatgaatgtgagaaatgctagaatgacttaca 130
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 113 bits (57), Expect = 1e-24
Identities = 110/125 (88%), Gaps = 2/125 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||||||||| || | ||||||||| |||||||| |||||| ||||||||||
Sbjct: 138 tactccctccgtttcataa-tgtaagtcattgtagcatttcccacattcatattgatgtc 80
Query: 102 a-tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
| | ||||||||||||| ||||| ||||||||||| |||||||||||||||||| ||| |
Sbjct: 79 actatctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattat 20
Query: 161 gaaac 165
|||||
Sbjct: 19 gaaac 15
Score = 91.7 bits (46), Expect = 4e-18
Identities = 98/112 (87%), Gaps = 5/112 (4%)
Strand = Plus / Plus
Query: 60 aatataagtcattttagcatttttcacatttatattgatgtta-tg--tctagattcatt 116
||||||||||||| ||||||||| |||||| ||| ||||| || || ||||||| | |
Sbjct: 22 aatataagtcattctagcattttccacattcatactgatgctaatgaatctagat--agt 79
Query: 117 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 80 gacatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacgga 131
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 68 tcattagcatcagtatgaatgtggaaaatgctagaatgactta 26
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||| |||||||| |||||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttaca 119
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 113 bits (57), Expect = 1e-24
Identities = 110/127 (86%), Gaps = 8/127 (6%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||| ||||| || | ||||||||| |||||||| ||||||| |||||
Sbjct: 130 tactccctccatttcataa-tgtaagtcattctagcatttctcacattcatatt------ 78
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 77 -tgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 123 aatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaa 119
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgagaaatactagaatgacttaca 24
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 180 aatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||| ||||||||||||||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttaca 111
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| ||||||||||| || | ||||||||| ||| |||| ||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcataa-tgtaagtcattctagtatttctcacattcatattgatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 113 bits (57), Expect = 1e-24
Identities = 110/127 (86%), Gaps = 8/127 (6%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||||| | ||||| |||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcatttttgtattttccacattcatattgatgt- 62
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|||||||||||||||||||||||||||| |||| ||| ||||||||| ||||||
Sbjct: 63 ------agattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtg 116
Query: 162 aaacgga 168
|||||||
Sbjct: 117 aaacgga 123
Score = 93.7 bits (47), Expect = 1e-18
Identities = 109/129 (84%), Gaps = 8/129 (6%)
Strand = Plus / Minus
Query: 40 attactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
|||||| |||||||||||||| ||||||||||||||| ||||| |||||| |||||||||
Sbjct: 132 attacttcctccgtttcacaa-tataagtcattttagtattttccacattcatattgatg 74
Query: 100 ttatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
||| || || |||||||||||||||||| |||| | | ||||||||||||||
Sbjct: 73 tta-------atgaatctacatcaatatgaatgtggaaaatacaaaaatgacttacattg 21
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 67 tcattaacatcaatatgaatgtggaaaatactaaaatgactta 109
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||| | | |||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttaca 24
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 113 bits (57), Expect = 1e-24
Identities = 113/129 (87%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
||||||||||||||||| || | ||||||||| || ||||| ||||||| |||| |||||
Sbjct: 4 ttactccctccgtttcataa-tgtaagtcattctaacatttctcacattcatatggatgt 62
Query: 101 -tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
|||||||||||||| ||||||| ||| |||||||| ||||| ||||||||||||||||
Sbjct: 63 atatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatta 122
Query: 160 tgaaacgga 168
| |||||||
Sbjct: 123 taaaacgga 131
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 118 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||| ||||||||||| |||||| |||||||||||||||| |||||||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacgga 12
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 173 taacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 79 taacatccatacgaatgtggaaaatgttagaatgacttaca 119
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttaca 24
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 88 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||| ||||||||||||| ||| | |||||||||||| |||||||||
Sbjct: 75 tctagattcattaacattaatatgaatgtggaaaaagttagaatgacttatattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 95 tcattaatatcaatatgaatgtgggaaatgctagaatgactta 137
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
||||||||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 158 tactccctccgtttcacaa-tataagtcattctagcatttcccacattcatattgat 103
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||| ||||||||||||||||| | ||||||||||||
Sbjct: 68 tcattaacattaatatgaatgtggaaaaagttagaatgactta 26
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 165 cgga 168
||||
Sbjct: 113 cgga 116
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 60 tcattaacatcaatatgaatgtaggaaatgctagaatgacttaca 104
Score = 63.9 bits (32), Expect = 9e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 137 aaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||||||||| || | ||||||||| |||||||| ||||| |||||||||||
Sbjct: 123 tactccctccgtttcataa-tgtaagtcattctagcatttcctacattcatattgatgtt 65
Query: 102 a 102
|
Sbjct: 64 a 64
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 190 tggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||
Sbjct: 47 tggaaaatgctagaatgacttaca 24
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||
Sbjct: 79 tatgtctagattcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 88 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattgtgata 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 95 tcattaatatcaatatgaatgtgggaaatgctagaatgacttaca 139
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||| ||||||| |||||| | |||||||||||
Sbjct: 68 tcattaacatcaatataaatgtgggaaatgcaaaaatgacttaca 24
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 84 tatgtctagattcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 63.9 bits (32), Expect = 9e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||| | | |||| |||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatttctagtgaaaatactagaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| |||||||||||||||| |||| |||||||| ||||||
Sbjct: 95 tcattaatatcaatatgaatgtgggaaatactagaatgtcttaca 139
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 83 tatgtctagattcattaacatcaatatgaatgtggaaaatattagaatgacttacattgt 142
Query: 161 gaaacgga 168
||||||||
Sbjct: 143 gaaacgga 150
Score = 79.8 bits (40), Expect = 1e-14
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| |||
Sbjct: 74 tctagattcattaatatcaatatgaatgtgggaaa-actagaataacttacattgtaaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 94 tcattaacatcaatatgaatgtggaaaatattagaatgacttaca 138
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| || ||||| |||||| |||||||||||
Sbjct: 157 tactccctccgtttcacaa-tgtaagtcattctaatattttccacattcatattgatgtt 99
Query: 102 a 102
|
Sbjct: 98 a 98
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatggtagaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||| ||||| |||||| | | ||||||||||||||||||||||||
Sbjct: 84 tatgtctagattcattaatatcaacatgaatttagaaaatgctagaatgacttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgagaaatggtagaatgacttaca 24
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||| |||||||||||| | ||||||||| || ||||| ||||||| |||||||||||
Sbjct: 5 tactccttccgtttcacaa-tgtaagtcattctaccatttctcacattcatattgatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| ||||| |||||| | ||||||||||||||||||||||
Sbjct: 95 tcattaatatcaacatgaatttagaaaatgctagaatgacttaca 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttt 82
||||||||||||||||| ||| ||||||||| |||||||||
Sbjct: 158 tactccctccgtttcac-aatgtaagtcattctagcatttt 119
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 45 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 104
Query: 165 cgga 168
||||
Sbjct: 105 cgga 108
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 52 tcattaatatcaatatgaatgtgggaaatgctagaatgacttaca 96
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 139 atgctagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||
Sbjct: 75 tatgtctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgt 134
Query: 161 gaaacgga 168
||||||||
Sbjct: 135 gaaacgga 142
Score = 77.8 bits (39), Expect = 6e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 40 attactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||||||||||||||| |||||||||||||||||||| || ||| |||||||||
Sbjct: 151 attactccctccgtttcacaa-tataagtcattttagcatttcccatattcatattgatg 93
Query: 100 tta 102
|||
Sbjct: 92 tta 90
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||| ||| |||||||| |||||||||
Sbjct: 86 tcattaacatcaatatgaatatgggaaatgctaaaatgactta 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/61 (88%), Gaps = 7/61 (11%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 68 tctagattcattaacatcaat------gtgggaaatgctagaa-gacttacattgtgaaa 16
Query: 165 c 165
|
Sbjct: 15 c 15
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct: 79 tatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattat 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 125 tatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacgga 138
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatatgagaaatgctagaatgacttaca 24
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 182 tatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| ||||||||||||||||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttaca 126
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 101 bits (51), Expect = 4e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||
Sbjct: 85 atgtctatattcattaacatcaatatgaatgcggaatatgctagaatgacttacattgtg 144
Query: 162 aaacgga 168
|||||||
Sbjct: 145 aaacgga 151
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 95 tcattaacatcaatatgaatgcggaatatgctagaatgacttaca 139
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| | | ||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatataggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 84 tatgtctagattcattagcatcaatatgaatgtggtaaatgttagaatgacttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
|||| |||||||||||||| ||||||||||| |||||||| ||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaa-tataagtcattctagcatttctcacattcatattgat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 95 tcattagcatcaatatgaatgtggtaaatgttagaatgacttaca 139
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 177 atcaatatgaatgtggaaaatgctagaatgactta 211
||||||||||||||| ||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgagaaatgctagaatgactta 26
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||||||||||| ||| ||||||||| || ||||| |||||| |||||||||
Sbjct: 158 tactccctccgtttcac-aatgtaagtcattctaacatttaccacattcatattgatg 102
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 4e-24
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 84 tatgtctagattcattaacattaatatgaatgtggagaatgctagaatgacttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 75 tctagattcattaacactaatatgaatgtgggaaatgctaaaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 95 tcattaacattaatatgaatgtggagaatgctagaatgacttaca 139
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| ||||||||||||| |||||||| |||||||||||
Sbjct: 68 tcattaacactaatatgaatgtgggaaatgctaaaatgacttaca 24
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 165 cgga 168
||||
Sbjct: 117 cgga 120
Score = 73.8 bits (37), Expect = 9e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||
Sbjct: 127 tacttcctccgtttcacaa-tataagtcattctagcatttctcacattcatattgatgtt 69
Query: 102 a 102
|
Sbjct: 68 a 68
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 64 tcattaacatcaatatgaatgtgagaaatgctagaatgactta 106
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 136 gaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 109 bits (55), Expect = 2e-23
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 110 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacgga 107
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 126 atgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 51 tcattaacatcaatatgaatgtaggaaatgctagaatgacttaca 95
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 183 atgaatgtggaaaatgctagaatgacttaca 213
|||||||||| ||||||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| |||||||| ||||| |||||||||||
Sbjct: 114 tacttcctccgtttcacaa-tgtaagtcattctagcatttcctacattcatattgatgtt 56
Query: 102 a 102
|
Sbjct: 55 a 55
Score = 48.1 bits (24), Expect = 5e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcattt 81
||||||||||||||||| ||| ||||||||| ||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 2e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||
Sbjct: 85 atgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtg 144
Query: 162 aaacgga 168
|||||||
Sbjct: 145 aaacgga 151
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||| | |||||||||||||||||| |||||||||||||||| || ||
Sbjct: 75 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 95 tcattaacacctatatgaatgtggaaaatgctagaatgacttaca 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 40 attactccctccgtttcacaaatataagtcattttagcatttttcacatttatat 94
||||||||||||||||||| ||| ||||||||| ||||||||| |||||| ||||
Sbjct: 160 attactccctccgtttcac-aatgtaagtcattctagcattttccacattcatat 107
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| | |||||||||||| ||||| ||||||||||||||
Sbjct: 68 tcattaacacctatatgaatgtgggaaatgttagaatgacttaca 24
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 107 bits (54), Expect = 6e-23
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | |||||||||||||||||| |||||| ||||||||| |
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattttagcatttcccacattcatattgatgat 63
Query: 102 a--------tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 153
| | |||||||| |||||||||||||| ||| || ||||||||||||||||||
Sbjct: 64 agatagatctatctagatttattaacatcaatataaatatgagaaatgctagaatgactt 123
Query: 154 acattgtgaaacgga 168
|||||||||||||||
Sbjct: 124 acattgtgaaacgga 138
Score = 107 bits (54), Expect = 6e-23
Identities = 117/136 (86%), Gaps = 9/136 (6%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
|||||||||||||||||||| | ||||||||| |||||||| ||| ||||||||||||||
Sbjct: 146 ttactccctccgtttcacaa-tgtaagtcattctagcatttctcatatttatattgatgt 88
Query: 101 tatg---tctagattcat-----taacatcaatatgaatgtgggaaatgctagaatgact 152
|| ||||||| || || |||||||||||||||||||||||||| |||||||
Sbjct: 87 taataaatctagatagatctatctatcatcaatatgaatgtgggaaatgctaaaatgact 28
Query: 153 tacattgtgaaacgga 168
||||||||||||||||
Sbjct: 27 tacattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 176 catcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||| |||||||| |||||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttaca 24
Score = 54.0 bits (27), Expect = 8e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 84 attaacatcaatataaatatgagaaatgctagaatgacttaca 126
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 107 bits (54), Expect = 6e-23
Identities = 113/132 (85%), Gaps = 8/132 (6%)
Strand = Plus / Plus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
||||| ||||||||||| || | ||||||||| |||||||||||||||| ||| ||||||
Sbjct: 4 ttacttcctccgtttcataa-tgtaagtcattctagcatttttcacattcatagtgatgt 62
Query: 101 ta-------tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 153
|| | |||||||| |||||||||| |||||||||||||||| ||||||||||||
Sbjct: 63 taatatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgactt 122
Query: 154 acattgtgaaac 165
||||| ||||||
Sbjct: 123 acattatgaaac 134
Score = 77.8 bits (39), Expect = 6e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 114 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||| |||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttaca 24
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||| ||||||||||| |||| |||||||||||||||
Sbjct: 83 attaacatcactatgaatgtgggaaatactagaatgacttaca 125
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 107 bits (54), Expect = 6e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 tagattcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 149
Query: 167 ga 168
||
Sbjct: 150 ga 151
Score = 93.7 bits (47), Expect = 1e-18
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||||||||||||| ||||||||||| |||||| || ||||||||||| ||||
Sbjct: 78 atgtctagattcattaacatctatatgaatgtgagaaatgataaaatgacttacaatgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||| |||||| |||||||||||| ||||||||||||||||||||
Sbjct: 95 tcatcaacatctatatgaatgtgggaaatgctagaatgacttaca 139
Score = 56.0 bits (28), Expect = 2e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||| ||| ||||||||| |||||||| |||||| |||| ||||||
Sbjct: 158 tactccctccgtttcac-aatgtaagtcattctagcatttcccacattcatatagatgtt 100
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 68 tcattaacatctatatgaatgtgagaaatgataaaatgacttaca 24
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 107 bits (54), Expect = 6e-23
Identities = 57/58 (98%)
Strand = Plus / Minus
Query: 111 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacgga 12
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactt 210
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatgctagaatgactt 27
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | |||||||| |||||||| |||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaa-tgcaagtcattctagcatttcccacattcatattgatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 105 bits (53), Expect = 3e-22
Identities = 113/129 (87%), Gaps = 3/129 (2%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
||||| |||||||||||||| | ||||||||| |||||||| || ||| |||||||| |
Sbjct: 138 ttacttcctccgtttcacaa-tgtaagtcattctagcatttcccatattcatattgatat 80
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctaga-atgacttacattg 159
| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 79 c-tatctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattg 21
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 20 tgaaacgga 12
Score = 89.7 bits (45), Expect = 2e-17
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 120 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacgga 130
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 177 atcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||| ||| ||||||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttaca 118
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctaga 203
|||||||||||||||||||||||| ||||| ||||
Sbjct: 69 tcattaacatcaatatgaatgtgggaaatgttaga 35
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 105 bits (53), Expect = 3e-22
Identities = 108/127 (85%), Gaps = 12/127 (9%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| ||||||||||| ||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaa-tataagtcattctagcattttccacatttatatt------ 57
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|||||||||||| |||||||||||| || ||||||||||||||||||||||| ||
Sbjct: 58 -----tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatg 112
Query: 162 aaacgga 168
|||||||
Sbjct: 113 aaacgga 119
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 123 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||| ||||||| |||||||||||||||||| |||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| |||||||||||| || ||||||||||||||||||||
Sbjct: 63 tcattaatatcaatatgaatatgagaaatgctagaatgacttaca 107
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 180 aatatgaatgtggaaaatgctagaatgactta 211
||||| ||||||||||||||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgactta 26
Score = 50.1 bits (25), Expect = 1e-05
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
|||||||||||||||| ||| ||||||||| |||||||| ||| ||| ||||||||
Sbjct: 126 tactccctccgtttca-taatgtaagtcattctagcatttctcatattcatattgat 71
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 105 bits (53), Expect = 3e-22
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 104 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 163
||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gtctagattcattaatataagtatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 164 acgga 168
|||||
Sbjct: 16 acgga 12
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||||
Sbjct: 84 tatgtctagattcattagcatcaatatggatgtgagaaatgctaaaatgacttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 67.9 bits (34), Expect = 6e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||||||||||||| | |||||||||||||||||| |||||| |||||||||
Sbjct: 158 tactccctccgtttcacaa-tgtaagtcattttagcatttctcacatccatattgatg 102
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| || | ||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaatataagtatgaatgtgggaaatgctagaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| |||||||||| ||||| |||||||| |||||||||||
Sbjct: 95 tcattagcatcaatatggatgtgagaaatgctaaaatgacttaca 139
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 153
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 89.7 bits (45), Expect = 2e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 153
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 49 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactt 210
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 69 tcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactt 210
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 42 tcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 65 aagtcattttagcatttttcacatttatattgatgtta 102
|||||||| |||||||| |||||| ||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgtta 73
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 105 bits (53), Expect = 3e-22
Identities = 109/127 (85%), Gaps = 8/127 (6%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||| ||| |||||||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaa-tgtaagttattctagcatttctcacattcatat------- 56
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 57 atgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtg 116
Query: 162 aaacgga 168
|||||||
Sbjct: 117 aaacgga 123
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 180 aatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||| ||||||||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttaca 111
Score = 44.1 bits (22), Expect = 8e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatatt 95
|||| |||||||||||| ||| ||||||||| |||||||| |||||| |||||
Sbjct: 130 tacttcctccgtttcac-aatgtaagtcattctagcatttcccacattcatatt 78
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 105 bits (53), Expect = 3e-22
Identities = 109/127 (85%), Gaps = 8/127 (6%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| ||||||||| || ||| ||||
Sbjct: 130 tactccctccgtttcacaa-tgtaagtcattctagcattttccatattcatat------- 79
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|| | || ||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 78 atatatatattcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacgga 123
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaacagcaatatgaatgtgagaaatgctagaatgacttaca 24
Score = 58.0 bits (29), Expect = 5e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 181 atatgaatgtggaaaatgctagaatgacttaca 213
|||||||| ||||||||||||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttaca 111
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 153
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 93.7 bits (47), Expect = 1e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 153
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactt 210
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 42 tcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactt 210
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 69 tcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 65 aagtcattttagcatttttcacatttatattgatgtta 102
|||||||| |||||||| |||||| ||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgtta 38
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| |
Sbjct: 79 tatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattat 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||||| |||||||||| ||||||||
Sbjct: 68 tcattaacatctatatgaatgtgggcaatgctagaaagacttaca 24
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 93.7 bits (47), Expect = 1e-18
Identities = 115/136 (84%), Gaps = 10/136 (7%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||||||||| || | |||||||||||| ||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcataa-tgtaagtcattttaccatttcccacattcatattgatgtt 63
Query: 102 a-tg--------tctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 152
| || ||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 64 aatgaatctagatctagattcattaacatcaatatgaatatagtaaatgctagaatgact 123
Query: 153 tacattgtgaaacgga 168
|| |||||| ||||||
Sbjct: 124 tatattgtggaacgga 139
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||| || |||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaatggtaaaatgacttaca 24
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 83 tcattaacatcaatatgaatatagtaaatgctagaatgactta 125
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||| |||||||||||||| | ||||||||||||||||||| |||||||||||||||
Sbjct: 79 tatgtcttgattcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| ||||||||||| |||||||| |||||||| |||| |||||||
Sbjct: 88 tagattcattaacatctatatgaatgtgaaaaatgctaaaatgacttgcattatgaaacg 147
Query: 167 ga 168
||
Sbjct: 148 ga 149
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactt 210
||||||||||| ||||||||||| ||||||||| ||||||||
Sbjct: 93 tcattaacatctatatgaatgtgaaaaatgctaaaatgactt 134
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| | |||||||||| |||||||| |||||||||||
Sbjct: 68 tcattaacatctacatgaatgtgggaaatgctaaaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | |||||||||||||||||| |||||| || | ||||||
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattttagcatttcccacattcatgtagatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| |
Sbjct: 84 tatgtctagattcactaacctccatatgaatgtgggaaatgctagaatgacttacattat 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||| |||| || |||||||| | |||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcactaacctctatatgaatataggaaatgctagaatgacttacattatgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
Score = 58.0 bits (29), Expect = 5e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 181 atatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||| ||||||||||||||||||||
Sbjct: 107 atatgaatgtgggaaatgctagaatgacttaca 139
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagagtcattaacatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||| ||||||||||||| | | |||||||||||||||||| |||||
Sbjct: 84 tatgtctagattcattagcatcaatatgaatatagaaaatgctagaatgacttatattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatacgaatgtggaaaatgctagaatgacttaca 24
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||| ||||||||||||| | ||||||||||||||||||||
Sbjct: 95 tcattagcatcaatatgaatatagaaaatgctagaatgactta 137
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| ||||||||| |||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattctagcattttccacattcgtattgatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 165 cgga 168
||||
Sbjct: 136 cgga 139
Score = 93.7 bits (47), Expect = 1e-18
Identities = 115/136 (84%), Gaps = 10/136 (7%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||||||||| || | |||||||||||| ||||| |||||| |||||||||||
Sbjct: 146 tactccctccgtttcataa-tgtaagtcattttaccatttcccacattcatattgatgtt 88
Query: 102 a-tg--------tctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 152
| || ||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 87 aatgaatctagatctagattcattaacatcaatatgaatatagtaaatgctagaatgact 28
Query: 153 tacattgtgaaacgga 168
|| |||||| ||||||
Sbjct: 27 tatattgtggaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||| ||||| || |||||||||||
Sbjct: 83 tcattaacatcaatatgaatgtgggaaatggtaaaatgacttaca 127
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatatagtaaatgctagaatgactta 26
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 75 tctagattcattaccatcaatatgaatgtgagaaatgctagaatgacttacattgcgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||||||
Sbjct: 87 tctagattcattaacattaatataaatatgggaaatgttagaatgacttacattgtgaaa 146
Query: 165 cgga 168
||||
Sbjct: 147 cgga 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 68 tcattaccatcaatatgaatgtgagaaatgctagaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||| ||||| ||| ||| ||||| ||||||||||||||
Sbjct: 94 tcattaacattaatataaatatgggaaatgttagaatgacttaca 138
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||| ||||||||| |||||| ||||||||||||| |||| |||||
Sbjct: 84 tatgtctagattcattatcatcaatataaatgtgaaaaatgctagaatggcttatattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 68 tcattaacataaatatgaatgtgggaaatgctacaatgactta 26
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| ||||||||||| |||||||| |||||| ||||| |||||
Sbjct: 5 tacttcctccgtttcacaa-tataagtcattgtagcatttcccacattcatatttatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
Score = 54.0 bits (27), Expect = 8e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||| ||||||||| |||||| |||||||||||||| ||||
Sbjct: 95 tcattatcatcaatataaatgtgaaaaatgctagaatggctta 137
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||
Sbjct: 88 tctagattcattaacatcaatataaatgtgggaaatgctaaaatgacttactttgtgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||| ||||||||||| |||||||||||||| | |||||||||| ||||
Sbjct: 79 tatgtctagattcataaacatcaatataaatgtgggaaatgcaaaaatgacttactttgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaaag-taagtcattttagcatttcccacatttatattgatgtt 100
Query: 102 a 102
|
Sbjct: 99 a 99
Score = 63.9 bits (32), Expect = 9e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttac 212
|||||||||||||||| ||||||| |||||||| ||||||||||
Sbjct: 95 tcattaacatcaatataaatgtgggaaatgctaaaatgacttac 138
Score = 48.1 bits (24), Expect = 5e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttac 212
|||| ||||||||||| ||||||| |||||| | ||||||||||
Sbjct: 68 tcataaacatcaatataaatgtgggaaatgcaaaaatgacttac 25
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 101 bits (51), Expect = 4e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 110 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacgga 119
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| |||||||||||||| | ||||||||||||||||||||
Sbjct: 63 tcattaatatcaatatgaatgttggaaatgctagaatgacttaca 107
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 181 atatgaatgtggaaaatgctagaatgacttaca 213
||||||| |||| ||||||||||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 101 bits (51), Expect = 4e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 110 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 4e-15
Identities = 107/127 (84%), Gaps = 9/127 (7%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| ||||||||| || ||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| || |||| ||||||||||||| ||| |||||||||||||||||||||| ||
Sbjct: 64 a-------atgaatta-catcaatatgaatatggaaaatgctagaatgacttacattatg 115
Query: 162 aaacgga 168
|||||||
Sbjct: 116 aaacgga 122
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatatggaaaatgctagaatgacttaca 24
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttaca 110
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 101 bits (51), Expect = 4e-21
Identities = 116/136 (85%), Gaps = 10/136 (7%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||||||| ||| |||||||| ||||||||||||| |
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattctagtatttttcatatttatattgatgct 63
Query: 102 a-tg--------tctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 152
| || |||| |||||||| ||||||||||||||| | |||||||||||||| |
Sbjct: 64 aatgaatctagatctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatt 123
Query: 153 tacattgtgaaacgga 168
||||||||||||||||
Sbjct: 124 tacattgtgaaacgga 139
Score = 81.8 bits (41), Expect = 4e-15
Identities = 113/137 (82%), Gaps = 10/137 (7%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg- 99
|||||||||||||||||||| | ||| ||||| ||||||||| ||||| |||||||||
Sbjct: 147 ttactccctccgtttcacaa-tgtaaatcattctagcattttctacattcatattgatgc 89
Query: 100 --------ttatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 151
||| ||||||||||||| ||||||||| ||| || |||| ||||||||||
Sbjct: 88 taatgaatttagatctagattcattagcatcaatataaatatgaaaaatactagaatgac 29
Query: 152 ttacattgtgaaacgga 168
|||||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||| |||||||||||||||| |||||
Sbjct: 83 tcattagcatcaatatgaatgtagaaaatgctagaatgatttaca 127
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||| ||| || ||||| |||||||||||||||
Sbjct: 68 tcattagcatcaatataaatatgaaaaatactagaatgacttaca 24
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 101 bits (51), Expect = 4e-21
Identities = 109/127 (85%), Gaps = 6/127 (4%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | |||| |||| |||||||| |||||| ||||||||||
Sbjct: 132 tacttcctccgtttcacaa-tgtaagacattctagcatttcccacattcatattgatgt- 75
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||
Sbjct: 74 ----ctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 162 aaacgga 168
||||||
Sbjct: 18 gaacgga 12
Score = 93.7 bits (47), Expect = 1e-18
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 118 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacgga 125
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||| ||||||||||||| ||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttaca 113
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| ||||||||| ||| ||| |||||||| |||||||||||
Sbjct: 68 tcattagcatcaatataaatatgggaaatgctataatgacttaca 24
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 101 bits (51), Expect = 4e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||| |||||||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 63 atgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtg 122
Query: 162 aaacgga 168
|||||||
Sbjct: 123 aaacgga 129
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 127 tgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgactt 210
|||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 75 attaacatcaatatgaatatgggaaatgctaaaatgactt 114
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 101 bits (51), Expect = 4e-21
Identities = 110/129 (85%), Gaps = 8/129 (6%)
Strand = Plus / Plus
Query: 40 attactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||||||||||||||| ||||||||||| |||||||| |||||| |||| ||
Sbjct: 3 attactccctccgtttcacaa-tataagtcattctagcatttcccacattcatatctat- 60
Query: 100 ttatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
||||||||||||||||||||||||||||| ||||| ||||||| ||||||||
Sbjct: 61 ------ctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacatta 114
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 115 tgaaacgga 123
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||| |||||| ||||||| ||||||
Sbjct: 67 tcattaacatcaatatgaatgtgaaaaatgatagaatggcttaca 111
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 181 atatgaatgtggaaaatgctagaatgactta 211
|||||||||||| ||||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgactta 26
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 163 aacgga 168
||||||
Sbjct: 17 aacgga 12
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||||| |||||||||| ||||||||
Sbjct: 68 tcattaacatctatatgaatgtgggcaatgctagaaagacttaca 24
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| | |||||| | | ||||||| || | |||||||| |
Sbjct: 82 tatgtctagattcattaacatctagatgaatataagcaatgctacaaagtcttacattat 141
Query: 161 gaaacgga 168
||||||||
Sbjct: 142 gaaacgga 149
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggtaatgctagaatgacttacattatga 145
Query: 163 aacgga 168
||||||
Sbjct: 146 aacgga 151
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||
Sbjct: 75 tctaaattcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| ||||| |||||| |||||||||||||||||||
Sbjct: 68 tcattaacatctatatgtatgtgggcaatgctagaatgacttaca 24
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 95 tcattaacatctatatgaatatgggtaatgctagaatgacttaca 139
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgttggtaatgctagaatgacttacattatga 18
Query: 163 aacgga 168
||||||
Sbjct: 17 aacgga 12
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||| ||||||||||||| |||| ||||||| ||||||||||||||||||||| |||||
Sbjct: 88 tctaaattcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||| | |||||||||||||||||||
Sbjct: 68 tcattaacatctatatgaatgttggtaatgctagaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||| |||||| |||||||||||||||||||
Sbjct: 95 tcattaacatctatatatatgtgggcaatgctagaatgacttaca 139
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 99.6 bits (50), Expect = 2e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 111 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacgga 144
Score = 91.7 bits (46), Expect = 4e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 111 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||| ||||||| |||| |||||||||||||||
Sbjct: 88 tcattaacatcaatataaatgtgggaaatactagaatgacttaca 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtgggaaataatagaatgactta 26
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 97.6 bits (49), Expect = 6e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 84 cacatttatattgatgttatgtctagattcattaacatcaatatgaatgtgggaaatgct 143
||||||||||| ||||||||||||||||||||||||||| |||| ||| ||| ||||||
Sbjct: 46 cacatttatatagatgttatgtctagattcattaacatctatataaatatggacaatgct 105
Query: 144 agaatgacttacattgtgaaacgga 168
|||| | |||||||| |||||||||
Sbjct: 106 agaaagtcttacattatgaaacgga 130
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 97.6 bits (49), Expect = 6e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 112 tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 118 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 145
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttaca 24
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaatgacttaca 133
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||| ||| ||||||||| ||||||||| |||||| |||| ||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattctagcattttccacattcatatcgatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 97.6 bits (49), Expect = 6e-20
Identities = 108/127 (85%), Gaps = 8/127 (6%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | |||||| |||||||||| ||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatga-aagtcaatttagcatttctcatattcatat------- 56
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|| ||||||||||||||||||||||||||||||| ||||| |||| |||||||||| |||
Sbjct: 57 atatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtg 116
Query: 162 aaacgga 168
|||||||
Sbjct: 117 aaacgga 123
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 67 tcattaacatcaatatgaatgtggaaaatgttagagtgacttaca 111
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||| || ||||||||| | |||||| ||||||||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||| | | ||||||| | || |||||| |||||| |||||||||||
Sbjct: 130 tactccctccgtttcacca-tgtaagtcactctaacattttccacattcatattgatgtt 72
Query: 102 a 102
|
Sbjct: 71 a 71
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 97.6 bits (49), Expect = 6e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 112 tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacgga 145
Score = 93.7 bits (47), Expect = 1e-18
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 118 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttaca 133
Score = 77.8 bits (39), Expect = 6e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttaca 24
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 97.6 bits (49), Expect = 6e-20
Identities = 84/95 (88%), Gaps = 3/95 (3%)
Strand = Plus / Plus
Query: 74 tagcatttttcacatttatattgatgttatgtctagattcattaacatcaatatgaatgt 133
||||||| |||||||| |||| ||| ||||||||||| ||||||||| ||||||||||
Sbjct: 36 tagcattgttcacattcatatagat---atgtctagatttattaacatctatatgaatgt 92
Query: 134 gggaaatgctagaatgacttacattgtgaaacgga 168
||| |||||||||| | ||||||||||||||||||
Sbjct: 93 gggcaatgctagaaagtcttacattgtgaaacgga 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| |||||||||||| |||||||||| | ||||||
Sbjct: 73 attaacatctatatgaatgtgggcaatgctagaaagtcttaca 115
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 97.6 bits (49), Expect = 6e-20
Identities = 111/128 (86%), Gaps = 4/128 (3%)
Strand = Plus / Plus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
||||||||||||||||| || | ||||||||| || |||||| |||||| |||| || |
Sbjct: 4 ttactccctccgtttcataa-tgtaagtcattctatcattttccacattcatatatat-t 61
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|| |||||||||||||||| ||||||||| ||| ||||||||||| ||||||||||||
Sbjct: 62 cat--ctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgt 119
Query: 161 gaaacgga 168
||||||||
Sbjct: 120 gaaacgga 127
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||| ||||| |||||||||||||||| |||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||| ||||||||| ||||||||||||||| ||||||||
Sbjct: 71 tcattaacattaatatgaatatggaaaatgctagaaggacttaca 115
Score = 58.0 bits (29), Expect = 5e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 181 atatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||||| ||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttaca 24
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||| |||||||||||| | |||||||||||||||||| ||||||||||| |||||
Sbjct: 79 tatgtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||
Sbjct: 86 tctagattcattaacatgagtatgaatgtgaaaaatgctagaatgacttacattgtgaaa 145
Query: 165 cgga 168
||||
Sbjct: 146 cgga 149
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||| | |||||||||| |||||||||||||||||||||
Sbjct: 93 tcattaacatgagtatgaatgtgaaaaatgctagaatgacttaca 137
Score = 54.0 bits (27), Expect = 8e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||| | ||||||||||| |||||| |||||||||||
Sbjct: 68 tcattaacatgagtatgaatgtgggaaatgccagaatgactta 26
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |
Sbjct: 58 tatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattat 117
Query: 161 gaaa 164
||||
Sbjct: 118 gaaa 121
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||| | || ||||||||||||||||||||| |||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacgga 12
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 69 tcattaacatctatatgaatgtgtgcaatgctagaatgacttaca 113
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| || |||||||| |||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 84 tatgtttaaattcattagcatctatatgaatgtggaaaatgctagaatgacttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
||||||||||| |||| |||||||| | | ||||| ||||||||||||||||||||||||
Sbjct: 73 tagattcattagcatctatatgaatatagaaaatgttagaatgacttacattgtgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 95 tcattagcatctatatgaatgtggaaaatgctagaatgacttaca 139
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||||||||||| ||| ||||||||| ||||||||| |||||| |||| ||||
Sbjct: 158 tactccctccgtttcac-aatgtaagtcattctagcattttccacattcatatagatg 102
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| |||| |||||||| | ||||||| ||||||||||||||
Sbjct: 68 tcattagcatctatatgaatatagaaaatgttagaatgacttaca 24
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| |
Sbjct: 79 tatgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattat 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 176 catcaatatgaatgtggaaaatgctagaatgacttaca 213
|||| |||||||||||||||||||||||||||||||||
Sbjct: 61 catcgatatgaatgtggaaaatgctagaatgacttaca 24
Score = 63.9 bits (32), Expect = 9e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||| |||||||||| ||||| ||| |||||||||||||||| |||||
Sbjct: 88 tctagattcattagcatcaatatggatgtgaacaatagtagaatgacttacattatgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
|||||||||||||||| ||| ||||||||| ||||||||| |||||| |||| ||||
Sbjct: 5 tactccctccgtttca-taatgtaagtcattctagcattttccacattcatatcgatg 61
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt- 100
||||||||||||||||||| | |||| | |||||||||| | || ||| |||| |||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagactttttagcattatccatattcatatagatgta 63
Query: 101 --tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
| |||||||||| ||||||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 64 tgtgtgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacatt 123
Query: 159 gtgaaacgga 168
||||||||||
Sbjct: 124 gtgaaacgga 133
Score = 54.0 bits (27), Expect = 8e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| ||||||||||||| |||||||||| | ||||||
Sbjct: 79 attaacatctatatgaatgtggacaatgctagaaagtcttaca 121
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 118 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||| |||||||| ||| ||||||| || | ||||||||||||||||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| ||||||||||||| ||| |||||| | ||||||||||
Sbjct: 84 tatgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||| ||||||||||||| |||||||| |||| | | |||||| | ||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacattgtga 18
Query: 163 aacgga 168
||||||
Sbjct: 17 aacgga 12
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 95.6 bits (48), Expect = 2e-19
Identities = 117/142 (82%), Gaps = 16/142 (11%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat--- 98
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 152 tactccctccgtttcacaa-tataagtcattttagcattttccacatttatattgatgct 94
Query: 99 ------------gttatgtctagattcattaacatcaatatgaatgtgggaaatgctaga 146
| ||| |||| |||||||| ||||||| | |||||| ||||||||| |
Sbjct: 93 aatgaatctagagatatatctaaattcattagcatcaatgtaaatgtgagaaatgctaaa 34
Query: 147 atgacttacattgtgaaacgga 168
||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacgga 12
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||
Sbjct: 82 tctagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgtgaaa 141
Query: 165 cgga 168
||||
Sbjct: 142 cgga 145
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||| ||||||||| |||||||||||||||| |||||||||
Sbjct: 89 tcattagcatcaatataaatgtggaaaatgctaaaatgactta 131
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 104 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 163
|||||||| |||| ||||||||||||||||||||||| | |||||||||||||| ||||
Sbjct: 84 gtctagatccattggcatcaatatgaatgtgggaaatggtggaatgacttacattatgaa 143
Query: 164 acgga 168
|||||
Sbjct: 144 acgga 148
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 177 atcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||| |||| |||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatactagaatgactta 26
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
||||| |||||||||||||| ||||||||||| ||| |||| |||||| ||||||||
Sbjct: 4 ttacttcctccgtttcacaa-tataagtcattctagtatttcccacattcatattgat 60
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 176 catcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||| ||||| | ||||||||||||
Sbjct: 99 catcaatatgaatgtgggaaatggtggaatgacttaca 136
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| |
Sbjct: 79 tatgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattat 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||| |||| ||||| ||||| |||| ||||||||||||||||| |||||
Sbjct: 88 tctagattcattagcatcgatatggatgtgaaaaatactagaatgacttacattatgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 176 catcaatatgaatgtggaaaatgctagaatgacttaca 213
|||| |||||||||||||||||||||||||||||||||
Sbjct: 61 catcgatatgaatgtggaaaatgctagaatgacttaca 24
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
|||||||||||||||| ||| ||||||||| ||||||||| |||||| |||| ||||
Sbjct: 5 tactccctccgtttca-taatgtaagtcattctagcattttccacattcatatcgatg 61
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| |||| ||||| ||||| ||||| |||||||||||||||
Sbjct: 95 tcattagcatcgatatggatgtgaaaaatactagaatgacttaca 139
Score = 48.1 bits (24), Expect = 5e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacat 88
||||||||||||||||| || | ||||||||| ||| |||||||||||
Sbjct: 159 ttactccctccgtttcataa-tgtaagtcattctagtatttttcacat 113
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| |||||||| | || ||||||||||||||||||||| |
Sbjct: 79 tatgtctagattcattaacatctatatgaatataggcaatgctagaatgacttacattat 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||| ||||||||||| | | ||||||||||||||||||| |||||
Sbjct: 88 tctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||| | | |||||||||||||||||||
Sbjct: 68 tcattaacatctatatgaatataggcaatgctagaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| ||||||||||| | |||||||||||||||||
Sbjct: 95 tcattaacatccatatgaatgtgagcattgctagaatgacttaca 139
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |
Sbjct: 79 tatgtccagattcattaacatctatatgaatgtgggcaatgctagaatgacttatattat 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 106 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
|||||||||||| ||| ||| ||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 87 ctagattcattagtatctataagaatgtgggcaatcctagaatgacttatattgtgaaac 146
Query: 166 gga 168
|||
Sbjct: 147 gga 149
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 68 tcattaacatctatatgaatgtgggcaatgctagaatgactta 26
Score = 46.1 bits (23), Expect = 2e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcatt 72
||||||||||||||||| |||||||||||||
Sbjct: 156 tactccctccgtttcac-aatataagtcatt 127
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||||| |
Sbjct: 79 tatgtctagattcattaacatctatatgaatgtgggcaatactagaaagacttacattat 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||||||||||||||||| |||||||| || | |||||||||| | |||||||| |||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgagcaatgctagaaagtcttacattatga 145
Query: 163 aacgga 168
||||||
Sbjct: 146 aacgga 151
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||||| ||| |||||| ||||||||
Sbjct: 68 tcattaacatctatatgaatgtgggcaatactagaaagacttaca 24
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 93.7 bits (47), Expect = 1e-18
Identities = 108/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| ||||||||||| || | ||||| ||| ||||||| |||||| | || |||| |
Sbjct: 5 tacttcctccgtttcataa-tgtaagttattctagcattgcccacattcacatagatgct 63
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||| ||
Sbjct: 64 atgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatg 123
Query: 162 aaacgga 168
|||||||
Sbjct: 124 aaacgga 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 76 attaacatctatatgaatgtggacaatgctagaataacttaca 118
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 127 tgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||| ||||||||||| ||||||||| |||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacgga 12
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 93.7 bits (47), Expect = 1e-18
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 118 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
|||| |||||||||||| ||| ||||||||| |||||||| ||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcac-aatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||| ||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttaca 24
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 139 atgctagaatgacttacattgtgaaacgga 168
|||||||| |||||||||||||||||||||
Sbjct: 75 atgctagattgacttacattgtgaaacgga 104
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 91.7 bits (46), Expect = 4e-18
Identities = 108/128 (84%), Gaps = 8/128 (6%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
|||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||
Sbjct: 131 ttaccccctccgtttcacaa-tataagtcattttaacatttttcacattcatatc----- 78
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||| ||| | ||| || |||||||| ||||||||| |||||
Sbjct: 77 --tgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 67.9 bits (34), Expect = 6e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 49 tccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtta 102
|||||||||||| |||||||||||||||||||||||| ||||| ||| ||||||
Sbjct: 12 tccgtttcacaa-tataagtcattttagcatttttcatatttacattaatgtta 64
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||| ||||| || ||||||||| |||||||||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacgga 123
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 91.7 bits (46), Expect = 4e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactta 154
||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 51 tatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 83.8 bits (42), Expect = 9e-16
Identities = 93/108 (86%), Gaps = 9/108 (8%)
Strand = Plus / Minus
Query: 60 aatataagtcattttagcatttttcacatttatattgatgtta-tg--tctaga------ 110
||||||||||||| |||||||| ||||||| ||||||||| || || ||||||
Sbjct: 108 aatataagtcattctagcatttctcacattcatattgatgctaatgaatctagacatata 49
Query: 111 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 158
||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 48 ttcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 47 tcattagcatcaatatgaatgtgagaaatgctagaatgacttaca 3
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 62 tcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
||||||||||||||||||||| | ||||| |||||||||||| |||||||||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | ||||| ||| ||||||||| |||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagttattctagcattttccacaattatattgatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 68 tcattaacatcaatataattgtggaaaatgctagaataacttaca 24
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 atgacttacattgtgaaacgga 168
||||||||||||||||||||||
Sbjct: 98 atgacttacattgtgaaacgga 119
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 91.7 bits (46), Expect = 4e-18
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 119 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 176 catcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||| |||| ||||||||||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttaca 24
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 131 tgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||| ||||||||| |||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacgga 100
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||||||||||| ||| ||||||||| |||||||| ||| || |||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattctagcatttcccacgttcatattgatg 61
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 91.7 bits (46), Expect = 4e-18
Identities = 109/129 (84%), Gaps = 12/129 (9%)
Strand = Plus / Plus
Query: 40 attactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||||||||||||| ||||||||| ||| |||||||| |||||| | |||||||
Sbjct: 3 attactccctccgtttcac-aatataagttattctagcatttcccacattcacattgatg 61
Query: 100 ttatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
||| | |||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 62 tta--tatagattcattaacatc---------gtgagaaatgctagaatgacttacattg 110
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 111 tgaaacgga 119
Score = 81.8 bits (41), Expect = 4e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 116 taacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||| |||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 173 taacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||| ||||||||| |||||||||||| |||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataactta 26
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 91.7 bits (46), Expect = 4e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 111 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacgga 114
Score = 83.8 bits (42), Expect = 9e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 123 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||| ||| ||||||||| |||||||| |||||||||| |||||||
Sbjct: 121 tactccctccgtttcac-aatctaagtcattctagcatttcccacatttatactgatgtt 63
Query: 102 a 102
|
Sbjct: 62 a 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||| ||| ||||||| ||||||||||||||||||
Sbjct: 58 tcattaacatcagtataaatgtgggaaatgctagaatgactta 100
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 180 aatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||| |||||||| |||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttaca 24
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 2e-17
Identities = 107/127 (84%), Gaps = 8/127 (6%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||||||| |||| | ||||||||||||| |||| ||||||||||| ||
Sbjct: 5 tactccctccgtttaacaa-tgtaagtcattttagtatttcccacatttatatctat--- 60
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||
Sbjct: 61 ----ctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtg 116
Query: 162 aaacgga 168
|||||||
Sbjct: 117 aaacgga 123
Score = 67.9 bits (34), Expect = 6e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
||||| |||||||||||||| | ||||||||||||||||||||||| | ||||||||||
Sbjct: 131 ttacttcctccgtttcacaa-tgtaagtcattttagcatttttcacgtacatattgatgt 73
Query: 101 ta 102
||
Sbjct: 72 ta 71
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||| | ||| ||||||||| |||||||||||
Sbjct: 67 tcattaacatcaatatgtacgtgaaaaatgctaaaatgacttaca 111
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 89.7 bits (45), Expect = 2e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 153
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 89.7 bits (45), Expect = 2e-17
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 153
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 170 cattaacatcaatatgaatgtggaaaatgctagaatgactt 210
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 41 cattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 170 cattaacatcaatatgaatgtggaaaatgctagaatgactt 210
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 83 cattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 65 aagtcattttagcatttttcacatttatattgatgtta 102
|||||||| |||||||| |||||| ||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgtta 38
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 65 aagtcattttagcatttttcacatttatattgatgtta 102
|||||||| |||||||| |||||| ||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgtta 86
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 89.7 bits (45), Expect = 2e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 120 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 121 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
||||||||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 5 tactccctccgtttcacaa-tataagtcattctagcatttcccacattcatattgat 60
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 177 atcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||| ||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgactta 26
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 178 tcaatatgaatgtggaaaatgctagaatgactta 211
||||||||||||||| ||||||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgactta 94
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 60 aatataagtcattttagcatttttcacatttatattga 97
||||||||||||| |||||||| |||||| |||||||
Sbjct: 98 aatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| | |||||||||| |||||||||| | ||||||||||
Sbjct: 79 tatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| | ||||||||||| |||||||||| | ||||||
Sbjct: 68 tcattaacatctaaatgaatgtggataatgctagaaagtcttaca 24
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| ||||||||||| |||| ||||||||||||| ||||||| ||||||||||||| |
Sbjct: 84 tatgtttagattcattaccatctatatgaatgtgggcaatgctaaaatgacttacattat 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||| ||||| || |||| || |||||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| |||| |||||||||||| ||||||| |||||||||||
Sbjct: 95 tcattaccatctatatgaatgtgggcaatgctaaaatgacttaca 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatt 80
|||||||||||||||| || | |||||||||||||||||
Sbjct: 158 tactccctccgtttcataa-tgtaagtcattttagcatt 121
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| |||||||| |||| ||| |||||| | ||||||||||
Sbjct: 84 tatgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||| ||||||||||||| |||||||| |||| | | |||||| | ||||||| ||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacatggtga 18
Query: 163 aacgga 168
||||||
Sbjct: 17 aacgga 12
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||| ||||||||||| | | ||||||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||| |||||||| | || ||||||||||||||||||||| |||||
Sbjct: 88 tctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| ||||||||||| | |||||||||||||||||
Sbjct: 68 tcattaacatccatatgaatgtgagcattgctagaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||| | | |||||||||||||||||||
Sbjct: 95 tcattaacatctatatgaatataggcaatgctagaatgacttaca 139
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||| ||||||||||||| || |||||||| ||||||||| |||||
Sbjct: 58 tatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgt 117
Query: 161 gaaacgga 168
||||||||
Sbjct: 118 gaaacgga 125
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
Score = 54.0 bits (27), Expect = 8e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||| ||||||||||||| ||||||||||| |||||||||
Sbjct: 69 tcattatcatcaatatgaatacggaaaatgctaaaatgactta 111
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 181 atatgaatgtggaaaatgctagaatgacttaca 213
||||||||| || ||||||||||||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| | |||||| |||| |||||||||| | ||||||||||
Sbjct: 79 tatgtctagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| ||||| | ||||| ||| |||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacg 149
Query: 167 ga 168
||
Sbjct: 150 ga 151
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 87.7 bits (44), Expect = 6e-17
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 125 tatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 88
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 136 gaaatgctagaatgacttacattgtgaaac 165
||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaac 15
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 182 tatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| ||||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttaca 76
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 165 cgga 168
||||
Sbjct: 120 cgga 123
Score = 67.9 bits (34), Expect = 6e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
||||| |||||||||||||| | ||||||||| ||||||||||||| | |||||||||||
Sbjct: 131 ttacttcctccgtttcacaa-tgtaagtcattctagcatttttcacgtatatattgatgt 73
Query: 101 ta 102
||
Sbjct: 72 ta 71
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||| | ||| |||||||||||||||||||||
Sbjct: 67 tcattaacatcaatatatacgtgaaaaatgctagaatgacttaca 111
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| || ||| |||||||||||||||||||||| |||| ||| |||||||||||||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 69.9 bits (35), Expect = 1e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 40 attactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
|||||| |||||||||||||| | ||||||||||||| ||||| |||||| |||||||||
Sbjct: 3 attacttcctccgtttcacaa-tgtaagtcattttagtattttccacattcatattgatg 61
Query: 100 tta 102
|||
Sbjct: 62 tta 64
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttaca 24
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||| ||||||||||||| |||||||||| | |||||||| |||||
Sbjct: 88 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||||||||||||||||| ||||||||||| | ||||||| || | |||||||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatga 18
Query: 163 aacgga 168
||||||
Sbjct: 17 aacgga 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||||| |||||||||| | ||||||
Sbjct: 95 tcattaacatctatatgaatgtgggcaatgctagaaagtcttaca 139
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 87.7 bits (44), Expect = 6e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 113 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| |||||||| ||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaa-tgtaagtcattctagcatttctcacatttatattaatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 170 cattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| ||||| |||||| ||||||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttaca 24
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 138 aatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacgga 94
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||| ||||||||||||| |||||||||| | |||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||||||||||||||||| ||||||||||| | ||||||| || | |||||||| |||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatga 145
Query: 163 aacgga 168
||||||
Sbjct: 146 aacgga 151
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||||| |||||||||| | ||||||
Sbjct: 68 tcattaacatctatatgaatgtgggcaatgctagaaagtcttaca 24
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 87.7 bits (44), Expect = 6e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 121 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 107
Score = 73.8 bits (37), Expect = 9e-13
Identities = 47/49 (95%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 120 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 178 tcaatatgaatgtggaaaatgctagaatgactta 211
||||||||||||||| ||||||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgactta 93
Score = 58.0 bits (29), Expect = 5e-08
Identities = 52/57 (91%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
||||||||||||||||| ||||||||||||| ||||| ||| |||||| ||||||||
Sbjct: 5 tactccctccgtttcac-aatataagtcattctagca-tttccacattcatattgat 59
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattga 97
|||| |||||||||||||| ||||||||||| |||||||| |||||| |||||||
Sbjct: 114 tacttcctccgtttcacaa-tataagtcattctagcatttcccacattcatattga 60
Score = 54.0 bits (27), Expect = 8e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 177 atcaatatgaatgtggaaaatgctagaatgactta 211
|||||||||||||||| ||||||||||||||||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgactta 26
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 85.7 bits (43), Expect = 2e-16
Identities = 56/59 (94%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 110 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 43/45 (95%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 67 tcattaacatcaatatggatgtg-aaaatgctagaatgacttaca 24
Score = 63.9 bits (32), Expect = 9e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 137 aaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacgga 105
Score = 50.1 bits (25), Expect = 1e-05
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||| ||| ||||||||| ||||| ||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcac-aatgtaagtcattctagca-ttttcacatccatattgatgtt 62
Query: 102 a 102
|
Sbjct: 63 a 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 183 atgaatgtggaaaatgctagaatgacttaca 213
||||||||| |||||||||||||||||||||
Sbjct: 64 atgaatgtg-aaaatgctagaatgacttaca 93
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||||||||||| | | ||||||||||| |||||||||| | |||||||||||
Sbjct: 78 atgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| ||||| || ||| |||||||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacg 149
Query: 167 ga 168
||
Sbjct: 150 ga 151
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 119 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggat 169
||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacggat 11
Score = 83.8 bits (42), Expect = 9e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 123 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 176 catcaatatgaatgtggaaaatgctagaatgactta 211
||||||||||||| ||| ||||||||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgactta 26
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 180 aatatgaatgtggaaaatgctagaatgactta 211
||||||||||||| ||||||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgactta 98
Score = 46.1 bits (23), Expect = 2e-04
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 49 tccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
|||||||||||| ||||||||||| |||||||| || ||| |||||||||
Sbjct: 12 tccgtttcacaa-tataagtcattctagcatttcccatattcatattgatg 61
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 106 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
|||||||||||| |||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 166 gga 168
|||
Sbjct: 122 gga 124
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||||||||||| ||| ||||||||| || |||||||||| || |||||||||
Sbjct: 131 tactccctccgtttcac-aatgtaagtcattctatcatttttcacgttcatattgatg 75
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||| || |||||| |||||||||||| |||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||| |||||||||||| ||| |||||| ||||||||||||||
Sbjct: 68 tcattagcatcaatatgaacgtgaaaaatgatagaatgacttaca 112
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|||||||||||||||| |||| ||||||||||||| |||| ||||| | |||||||||||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtg 144
Query: 162 aaacgga 168
|||||||
Sbjct: 145 aaacgga 151
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||| |||| |||| ||||||||||||| ||||||| || | |||||||| |||||||
Sbjct: 73 tagatttattagcatctatatgaatgtgggtaatgctataaagtcttacattatgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 85.7 bits (43), Expect = 2e-16
Identities = 77/87 (88%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 68 tcattttagcatttttcacatttatattgatgtta-tgtctagattcattaacatcaata 126
||||| |||||||| |||||| ||||||||| || || | ||||||||| ||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatcgattcattagcatcaata 28
Query: 127 tgaatgtgggaaatgctagaatgactt 153
|||||||||||||||||||||||||||
Sbjct: 27 tgaatgtgggaaatgctagaatgactt 1
Score = 85.7 bits (43), Expect = 2e-16
Identities = 77/87 (88%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 65 aagtcattttagcatttttcacatttatattgatgtta-tgtctagattcattaacatca 123
|||||||| |||||||| |||||| ||||||||| || || | ||||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatcgattcattagcatca 60
Query: 124 atatgaatgtgggaaatgctagaatga 150
|||||||||||||||||||||||||||
Sbjct: 61 atatgaatgtgggaaatgctagaatga 87
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactt 210
|||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 42 tcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatga 207
|||||| ||||||||||||||||| ||||||||||||||
Sbjct: 49 tcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 110 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacgga 124
Score = 73.8 bits (37), Expect = 9e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| | ||||||||| ||||||||||||| ||||||||||||||
Sbjct: 131 tacttcctccgtttcacaa-tgtaagtcattctagcatttttcacgtttatattgatgtt 73
Query: 102 a 102
|
Sbjct: 72 a 72
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||| || ||| |||||||||||||||||||||
Sbjct: 68 tcattaacatcaatataaacgtgaaaaatgctagaatgacttaca 112
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 83.8 bits (42), Expect = 9e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 120 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaac 113
Score = 81.8 bits (41), Expect = 4e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 112 tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||| || ||||| ||||||||||||| |||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacgga 12
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 167 gatcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 70 gatcattaacatcaatatgaatgtggaaagtgctaaaatgacttaca 24
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 177 atcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||| || |||||||||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttaca 104
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 83.8 bits (42), Expect = 9e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 100 ttatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
||||||||| |||||||| ||| ||||||||||||| |||||||||| | |||||||||
Sbjct: 51 ttatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattg 110
Query: 160 tgaaacggat 169
||||||||||
Sbjct: 111 tgaaacggat 120
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 83.8 bits (42), Expect = 9e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||| ||||||||||||| ||||||||||||| |||||||||| | |||||||| |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 163 aacgga 168
||||||
Sbjct: 17 aacgga 12
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 118 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||| ||||||||||||| |||||||||| | |||||||| |||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 135
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||||| |||||||||| | ||||||
Sbjct: 68 tcattaacatctatatgaatgtgggcaatgctagaaagtcttaca 24
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 83.8 bits (42), Expect = 9e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 104 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 163
||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 164 ac 165
||
Sbjct: 121 ac 122
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||| || |||| ||||||||||||||||||||| |||||||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaacgga 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| ||||| |||||| ||||||||||||| |||||
Sbjct: 69 tcattaacatctatatgcatgtgggcaatgctagaatgatttaca 113
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 83.8 bits (42), Expect = 9e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 120 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacgga 118
Score = 81.8 bits (41), Expect = 4e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 120 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 177 atcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||||||| |||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttaca 24
Score = 60.0 bits (30), Expect = 1e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 177 atcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||| |||||||||||| |||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttaca 106
Score = 58.0 bits (29), Expect = 5e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
||||||||||||||||| ||| ||||| ||| ||||||||| |||||| ||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagttattctagcattttccacattcatattgat 60
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
||||||||||||||||| ||| ||||| ||| |||||||| |||||| ||||||||
Sbjct: 125 tactccctccgtttcac-aatgtaagttattctagcatttnccacattcatattgat 70
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 83.8 bits (42), Expect = 9e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| ||||||||| ||| |||||||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 167 ga 168
||
Sbjct: 150 ga 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
||||||||||||||| |||| || |||||||||| |||||||||| | |||||||| |||
Sbjct: 77 tgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 163 aacgga 168
||||||
Sbjct: 17 aacgga 12
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 83.8 bits (42), Expect = 9e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 119 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacgga 12
Score = 67.9 bits (34), Expect = 6e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||| |||||| || | |||||||||||| |||||||||||||||||||||||
Sbjct: 143 tactccctctgtttcataa-tgtaagtcattttaacatttttcacatttatattgatg 87
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||||||||||| ||| ||||||||| ||| |||| ||||||| |||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 176 catcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||| |||| |||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttaca 24
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 119 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
||||||||| |||||| ||||| || ||||||||||||| ||||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaac 133
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 176 catcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| |||||| |||||| || |||||||||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttaca 124
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 9e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||||||||||||||||| ||||||||||| | |||||||| | | ||||||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtga 18
Query: 163 aacgga 168
||||||
Sbjct: 17 aacgga 12
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||| || |||||||||| |||| || || | ||||||||||||||
Sbjct: 88 tctagattcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 83.8 bits (42), Expect = 9e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| ||||||||||||| |||||||||| | |||||||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 167 ga 168
||
Sbjct: 132 ga 133
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||||| |||||||||| | ||||||
Sbjct: 77 tcattaacatctatatgaatgtgggcaatgctagaaagtcttaca 121
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 81.8 bits (41), Expect = 4e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattttagcatttctcatatttatattgatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
Score = 81.8 bits (41), Expect = 4e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||
Sbjct: 122 tacttcctccgtttcacaa-tataagtcattttagcatttctcatatttatattgatgtt 64
Query: 102 a 102
|
Sbjct: 63 a 63
Score = 44.1 bits (22), Expect = 8e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 172 ttaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||| ||| || |||||||| |||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttaca 24
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 4e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 120 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 12
Score = 81.8 bits (41), Expect = 4e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 120 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacgga 118
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 177 atcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||||||| |||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttaca 24
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 177 atcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||||||| |||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttaca 106
Score = 58.0 bits (29), Expect = 5e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
||||||||||||||||| ||| ||||| ||| ||||||||| |||||| ||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagttattctagcattttccacattcatattgat 60
Score = 58.0 bits (29), Expect = 5e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
||||||||||||||||| ||| ||||| ||| ||||||||| |||||| ||||||||
Sbjct: 125 tactccctccgtttcac-aatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| |||||||||||||||| | ||||||||||| |||||||||| | ||||||||||
Sbjct: 79 tatgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgt 20
Query: 161 gaaac 165
|||||
Sbjct: 19 gaaac 15
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 81.8 bits (41), Expect = 4e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 110 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 126 atgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactt 210
|||||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 51 tcattagcatcaatatgaatgtgggaaatgctaaaatgactt 92
Score = 48.1 bits (24), Expect = 5e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatt 89
||||||||||||||||| ||| ||| ||||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcac-aatgtaactcattctagcatttctcacatt 51
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 65 aagtcattttagcatttttcacatttatattgatg 99
||||||||||||||||| |||||| |||||||||
Sbjct: 92 aagtcattttagcatttcccacattcatattgatg 58
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 167
|||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 129 aatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacgga 142
Score = 58.0 bits (29), Expect = 5e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatat 94
||||||||||||||||| ||| ||||||||| |||||||| |||||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattctagcatttcccacatttatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttata 93
||||||||||||||||| ||| ||||||||| |||||||| ||||||||||
Sbjct: 149 tactccctccgtttcac-aatgtaagtcattctagcatttcccacatttata 99
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 181 atatgaatgtggaaaatgctagaatgacttaca 213
|||| ||||||| ||||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttaca 24
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 181 atatgaatgtggaaaatgctagaatgacttaca 213
|||| ||||||| ||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttaca 87
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||| |||| | |||||| |||| |||||||||| | ||||||||||
Sbjct: 84 tatgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
||||||||||||||| ||||| ||||||| |||||||||| | ||||||||||||||||
Sbjct: 73 tagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| |||||||||||| ||| ||| || | ||||||||||
Sbjct: 84 tatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||| |||||||||||| |||||||| |||| ||| |||||| | |||| ||| |||||
Sbjct: 75 tctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 121 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattga 97
||||||||||||||||| ||| ||||||||| |||||||| ||| ||||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattctagcatttcccacgtttatattga 59
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 138 aatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||| |||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacgga 97
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 178 tcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||| || |||| ||||||||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| ||||||||||| ||||||||||||| || |||||| |||||||||||| |||||
Sbjct: 84 tatgtttagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgt 143
Query: 161 gaaacgga 168
| ||||||
Sbjct: 144 ggaacgga 151
Score = 63.9 bits (32), Expect = 9e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||| |||||||| ||||||||||||| ||| |||| ||||||||||||| | |||| ||
Sbjct: 75 tctaaattcattagcatcaatatgaatatggaaaatactagaatgacttatactgtggaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 63.9 bits (32), Expect = 9e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttacactg 216
|||||| ||||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 68 tcattagcatcaatatgaatatggaaaatactagaatgacttatactg 21
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
||||||||||||| ||||| ||||||||||| || ||||| ||| ||| |||||||||
Sbjct: 158 tactccctccgttccacaa-tataagtcattctaacatttctcatattcatattgatg 102
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
|||||| ||||||||||||| || ||||| ||||||||||||
Sbjct: 95 tcattagcatcaatatgaatatgagaaatgttagaatgactta 137
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||||||||||||| |||||||||||| |||||||||| | |||||||| ||
Sbjct: 59 atgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatg 118
Query: 162 aaac 165
||||
Sbjct: 119 aaac 122
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| ||||||||||||| |||||||||| | ||||||
Sbjct: 69 tcattaacatctatatgaatgtggacaatgctagaaagtcttaca 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 118 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||| |||||||||||| |||||||||| | |||||||| |||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||| ||||||||||||| |||||||||| | ||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttaca 24
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| | |||||| |||| ||||||| || | ||||||||||
Sbjct: 84 tatgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
||||||||||||| || ||||| || || | |||||||||| | ||||||||||||||||
Sbjct: 73 tagattcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| |||||||||||||||| ||||| ||||||| |||||||||| | |||| |||||
Sbjct: 62 tatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgt 121
Query: 161 gaaacgga 168
||||||||
Sbjct: 122 gaaacgga 129
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| |||||||||||||||| ||||| ||||||| |||||||||| | |||| |||||
Sbjct: 79 tatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| |||||||||| | |||||||||| | |||||||| |
Sbjct: 79 tatgtctagattcattaacatctatatgaatgtagacaatgctagaaagtcttacattat 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| |||||||||||| || |||||| | |||||||| |||||||
Sbjct: 90 tagattcattaacatctatatgaatgtggacaaacctagaaagtcttacattatgaaacg 149
Query: 167 ga 168
||
Sbjct: 150 ga 151
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||| || |||||||||| | ||||||
Sbjct: 68 tcattaacatctatatgaatgtagacaatgctagaaagtcttaca 24
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||| ||||||||| ||| || ||||| ||||||||||||| |||||||||
Sbjct: 75 tctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaa 16
Query: 165 cgga 168
||||
Sbjct: 15 cgga 12
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatg 99
|||| |||||||||||||| ||||||||||| ||| |||| ||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaa-tataagtcattctagtatttctcatatttatattgatg 61
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 136 gaaatgctagaatgacttacattgtgaaacgga 168
||||||||| ||||||||||||| |||||||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacgga 121
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| |||||||||||| ||| ||| || | ||||||||||
Sbjct: 79 tatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||| |||||||||||| |||||||| |||| ||| |||||| | |||| ||| |||||
Sbjct: 88 tctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaa 147
Query: 165 cgga 168
||||
Sbjct: 148 cgga 151
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||| ||||||||| | ||| ||||||| |||||||||| | ||||||||||
Sbjct: 84 tatgtctagatttattaacatctaaatgtatgtgggcaatgctagaaagtcttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| |||||||||||||||| | ||||||| || ||| ||| || | ||||||||||
Sbjct: 79 tatgtttagattcattaacatctaaatgaatggaggtaatactataaagtcttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| | ||||||||||| || |||| || | ||||||||||
Sbjct: 79 tatgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| |||| ||||||| | ||||| || | |||| |||||||||||
Sbjct: 86 tagattcattaacatctttatgtatgtgggtagtgctaaaaagtcttatattgtgaaacg 145
Query: 167 ga 168
||
Sbjct: 146 ga 147
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 77.8 bits (39), Expect = 6e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 130 atgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacgga 12
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 138 aatgctagaatgacttacattgtgaaacgga 168
||||||||||||| |||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacgga 88
Score = 48.1 bits (24), Expect = 5e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcattt 81
||||||||||||||||| ||| ||||||||| ||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 187 atgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 77.8 bits (39), Expect = 6e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctag 145
|||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatgctag 88
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatg 141
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 44 atgtctagattcattgacatcaatatgaatgtgggaaatg 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctag 202
||||| |||||||||||||||||| |||||||||
Sbjct: 55 tcattgacatcaatatgaatgtgggaaatgctag 88
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatg 198
||||| |||||||||||||||||| |||||
Sbjct: 34 tcattgacatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 106 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
|||||||||||||||||||||||||| | || |||||||||| | |||||||| ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaac 15
Query: 166 gga 168
|||
Sbjct: 14 gga 12
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
||||||||||||||||||| |||||||||||| |||||||||| | |||||||| |||
Sbjct: 84 tgtctagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatga 143
Query: 163 aacgga 168
||||||
Sbjct: 144 aacgga 149
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||| ||||||||||||| |||||||||| | ||||||
Sbjct: 93 tcattaacatttatatgaatgtggacaatgctagaaagtcttaca 137
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 106 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
||||||||||||||||| ||||| ||||||| |||||||||| | |||||||| ||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 166 gga 168
|||
Sbjct: 138 gga 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||||||||||||||||| | |||||||| | |||||||||| | ||||||||||||
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 163 aacgga 168
||||||
Sbjct: 17 aacgga 12
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
||||||||||||||||||||| ||||||||||||| |||||||||| | |||| | | ||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatg 112
Query: 162 aaacgga 168
|||||||
Sbjct: 113 aaacgga 119
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaa 204
||||||||||| |||||||||||| ||||||||||
Sbjct: 63 tcattaacatctatatgaatgtgggcaatgctagaa 98
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| ||||| ||||| | |||||||||| | ||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 167 ga 168
||
Sbjct: 150 ga 151
Score = 48.1 bits (24), Expect = 5e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||| ||||||||||||| | |||||||| || ||| || || | ||||||||||
Sbjct: 79 tatgtctatattcattaacatctaaatgaatgtaggcaatattaaaaagtcttacattgt 20
Query: 161 gaaacgga 168
|||||||
Sbjct: 19 aaaacgga 12
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
||||||||||| |||||||| |||||||||||| |||||||||| | |||||||| |||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 163 aacgga 168
||||||
Sbjct: 96 aacgga 101
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 172 ttaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||| ||||||||||||| |||||||||| | ||||||
Sbjct: 48 ttaacatctatatgaatgtggacaatgctagaaagtcttaca 89
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 108/129 (83%), Gaps = 3/129 (2%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatt--tatattgatg 99
|||| |||||||||||| ||| ||||||||| ||| ||||| |||||| || | | ||
Sbjct: 5 tacttcctccgtttcac-aatgtaagtcattctagtattttccacattcatagagttatt 63
Query: 100 ttatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 159
|||||||||||||||||||| ||||| ||| | ||||| ||||||||||||| ||||
Sbjct: 64 atatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatattg 123
Query: 160 tgaaacgga 168
|||||||||
Sbjct: 124 tgaaacgga 132
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 125 tatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 182 tatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||||| |||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttaca 24
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 123 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacgga 102
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 146 aatgacttacattgtgaaacgga 168
|||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 41 ttactccctccgtttcacaaatataagtcattttagcatttttcacatttatatt 95
||||| |||||||||||||| | ||||||||||||| |||| |||||| |||||
Sbjct: 110 ttacttcctccgtttcacaa-tgtaagtcattttagtatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 8e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcatttta 75
||||||||||||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcatttta 37
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 180 aatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||| |||| ||| |||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttaca 90
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||| ||||||| |||| ||| || ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||| ||||||| | |||||||| |||||||| ||||||||||||| |
Sbjct: 84 tatgtctagattcactaacatccaagtgaatgtgaaaaatgctacaatgacttacattat 143
Query: 161 gaaac 165
|||||
Sbjct: 144 gaaac 148
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||||||||||||||| ||| ||||||||| |||||||| ||| ||| |||| ||||||
Sbjct: 5 tactccctccgtttca-taatgtaagtcattctagcatttctcatattgatatagatgtt 63
Query: 102 a 102
|
Sbjct: 64 a 64
Score = 48.1 bits (24), Expect = 5e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatt 89
||||||||| |||||| || | ||||||||| ||||||||||||||||
Sbjct: 158 tactccctctgtttcataa-tgtaagtcattgtagcatttttcacatt 112
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 184 tgaatgtggaaaatgctagaatgacttaca 213
|||||||| ||||||||| |||||||||||
Sbjct: 110 tgaatgtgaaaaatgctacaatgacttaca 139
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 73.8 bits (37), Expect = 9e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 112 tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||| |||||||||| |||||| ||||||||||||||||||| ||||| |||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacgga 86
Score = 69.9 bits (35), Expect = 1e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
|||| ||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 93 tacttcctccgttttacaa-tataagtcattctagcatttctcacatttatattgatgt 36
Score = 54.0 bits (27), Expect = 8e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatgactta 211
||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgactta 72
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 129 aatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacgga 109
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 128 gaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatt 89
||||||||||||||||| ||| ||||||||| ||||||||| ||||||
Sbjct: 116 tactccctccgtttcac-aatgtaagtcattctagcattttccacatt 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 186 aatgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||||||
Sbjct: 70 aatgtggaaaatgctagaatgacttaca 97
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 185 gaatgtggaaaatgctagaatgactt 210
|||| |||||||||||||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgactt 27
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 129 aatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacattgtgaaacgga 82
Score = 54.0 bits (27), Expect = 8e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 142 ctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||| |||| ||||||||||||| |||||||||| | |||| | | |
Sbjct: 84 tatgtctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataatat 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 111 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||| |||||| |||||| |||||||||| | |||| | | |||||||||
Sbjct: 69 ttcattaacatctatatgattgtgggcaatgctagaaagtcttataatatgaaacgga 12
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 71.9 bits (36), Expect = 4e-12
Identities = 107/128 (83%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt- 100
|||| |||||||| ||||| |||||| | || ||||||| ||||||| || | |||||
Sbjct: 138 tacttcctccgttccacaa-tataagactttctagcattactcacattcatttagatgta 80
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| |||||||||||||||| || | ||||||| |||||||||| ||||||||||
Sbjct: 79 tatgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgt 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||||||| ||||||||||||| |||||||||| | |||| | | |
Sbjct: 58 tatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataattt 117
Query: 161 gaaacgga 168
||||||||
Sbjct: 118 gaaacgga 125
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatg 149
||||||||||||||||||| | |||||||||||| |||||||||||||
Sbjct: 48 atgtctagattcattaacacctatatgaatgtggaaaatgctagaatg 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatg 149
|||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 58 tctagattcattaacacctatatgaatgtgggaaatgttagaatg 102
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatg 206
||||||||| | ||||||||||||||||||||||||||
Sbjct: 38 tcattaacacctatatgaatgtggaaaatgctagaatg 1
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaatg 206
||||||||| | |||||||||||| ||||| |||||||
Sbjct: 65 tcattaacacctatatgaatgtgggaaatgttagaatg 102
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||| ||||||||||||| |||||||||| | |||| | | |||||
Sbjct: 89 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaa 148
Query: 165 cgga 168
||||
Sbjct: 149 cgga 152
Score = 54.0 bits (27), Expect = 8e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 103 tgtctagattcatt-aacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|||||||||| ||| |||||| ||||||||||||| |||||||||| | |||| | | ||
Sbjct: 78 tgtctagattaatttaacatctatatgaatgtgggtaatgctagaaagtcttataatatg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaa 204
||||||||||| |||||||||||| ||||||||||
Sbjct: 96 tcattaacatctatatgaatgtgggcaatgctagaa 131
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 147
|||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 47 tctagattcattaacatccatatgaatgtgggcaatgctagaa 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 147
|||||||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 64 tgtctagattcattaacatccatatgaatgtgggcaatgttagaa 108
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaa 204
||||||||||| |||||||||||| ||||||||||
Sbjct: 40 tcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgt 100
||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaa-tgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 118 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 121 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||| |||| ||||||||||||||||| |||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaa 105
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 178 tcaatatgaatgtggaaaatgctagaatgacttaca 213
|||||||||||||| ||||| |||||||||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttaca 97
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 175 acatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttaca 24
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 40 attactccctccgtttcacaaatataagtcattttagcatttttcacatttatattga 97
|||||||||||| ||||| || | ||||||||| ||| |||||||||||| |||||||
Sbjct: 118 attactccctccatttcataa-tgtaagtcattctagtatttttcacattcatattga 62
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 106 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
|||||||||||| ||| ||||||||||||| |||||||||| | |||||||| ||||||
Sbjct: 89 ctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaac 148
Query: 166 gga 168
|||
Sbjct: 149 gga 151
Score = 58.0 bits (29), Expect = 5e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||| ||| |||| |||||||| || ||||||| | |||||||| |
Sbjct: 79 tatgtctagattcattagtatctatataaatgtgggcaacgctagaaagtcttacattat 20
Query: 161 gaaac 165
|||||
Sbjct: 19 gaaac 15
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 130 atgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||||| |||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacgga 121
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||| ||| || |||| |||||| |||||| |||||||||||| ||| |||||
Sbjct: 75 tctagattcactaatttccatataaatgtgagaaatgttagaatgacttatattatgaaa 16
Query: 165 cg 166
||
Sbjct: 15 cg 14
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 60 aatataagtcattttagcatttttcacatttatat 94
||||||||||||| || ||||| ||||||||||||
Sbjct: 22 aatataagtcattctaacatttctcacatttatat 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 187 atgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttaca 109
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 126 atgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacgga 12
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 131 tgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||| ||||||||||||||||||||||||||||||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacgga 101
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 42 tactccctccgtttcacaaatataagtcattttagcattt 81
||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcac-aatgtaagtcattttagcattt 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 188 tgtggaaaatgctagaatgacttaca 213
||||||||||||||||||||||||||
Sbjct: 64 tgtggaaaatgctagaatgacttaca 89
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatat 94
|||| |||||||||||| ||| ||||||||| ||||||||| |||| ||||||
Sbjct: 108 tacttcctccgtttcac-aatgtaagtcattctagcattttccacaattatat 57
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 105/127 (82%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| ||||||||||| | |||||| | || ||||||| | |||||| |||| ||||||
Sbjct: 137 tacttcctccgtttca-tattataagactttctagcattgtccacattcatatagatgtt 79
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
|||||||||| ||||||||| || ||||||||| |||||||||| | |||| | | ||
Sbjct: 78 gtgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatatg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 174 aacatcaatatgaatgtggaaaatgctagaa 204
|||||| ||||||||||||| ||||||||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaa 109
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 130 atgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 141 gctagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacgga 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 187 atgtggaaaatgctagaatgacttaca 213
|||||| ||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttaca 24
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
||||||||||||||||||| ||||||||||||| || ||||||| | |||||||| |||
Sbjct: 77 tgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatga 18
Query: 163 aac 165
|||
Sbjct: 17 aac 15
Score = 58.0 bits (29), Expect = 5e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| |||||||||| | ||| ||||||||||||| ||||||| || | |||||||| |
Sbjct: 84 tatgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtcttacattat 143
Query: 161 gaaac 165
|||||
Sbjct: 144 gaaac 148
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 106/127 (83%), Gaps = 2/127 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgatgtt 101
|||| ||||||||||| || | ||||||||| ||||||| | ||||| |||| ||| |
Sbjct: 136 tacttcctccgtttcataa-tgtaagtcattctagcattgtctacattcatatagatata 78
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 161
| ||||||||||||||| ||| ||||| || |||| ||| |||||||||||||||| ||
Sbjct: 77 a-gtctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatg 19
Query: 162 aaacgga 168
|||||||
Sbjct: 18 aaacgga 12
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacgga 129
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 181 atatgaatgtggaaaatgctagaatgacttaca 213
|||||||||| || |||||||||||||||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttaca 117
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 147
|||| ||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 60 tatgcctagattcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 147
|||| |||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 55 tatgcctagattcattaacatatatatgaatatgggcaatgctagaa 9
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaa 204
||||||||||| |||||||||||| ||||||||||
Sbjct: 71 tcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
|||||| ||||||||||||| ||||||||||||| ||||||| || | ||||||| |||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatga 129
Query: 163 aacgga 168
||||||
Sbjct: 130 aacgga 135
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 118 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||| ||||||||||||| |||||||||| | |||||||| |||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 123 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||| ||| ||| |||||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacgga 133
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 123 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||| ||||| || ||| |||||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 106 ctagattcattaacatcaatatgaatgtgggaaatgctagaa 147
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 102 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 147
|||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 54 atgtctagattcattaacatatatatgaatgtggacaatgctagaa 9
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaa 204
|||||||||| ||||||||||||| ||||||||||
Sbjct: 44 tcattaacatatatatgaatgtggacaatgctagaa 9
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaa 204
||||||||||| |||||||||||| ||||||||||
Sbjct: 71 tcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 162
||||||||||| |||||||| |||||||| ||| |||||||||| | |||||||| |||
Sbjct: 77 tgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatga 18
Query: 163 aacgga 168
||||||
Sbjct: 17 aacgga 12
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| ||||||||||||| |||||||||| | |||| | | |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| ||||||||||||| |||||||||| | |||| | | |||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 151
Query: 167 ga 168
||
Sbjct: 152 ga 153
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaa 204
||||||||||| |||||||||||| ||||||||||
Sbjct: 68 tcattaacatctatatgaatgtgggcaatgctagaa 33
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaa 204
||||||||||| |||||||||||| ||||||||||
Sbjct: 97 tcattaacatctatatgaatgtgggcaatgctagaa 132
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 106 ctagattcattaacatcaatatgaatgtgggaaatgctagaa 147
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 147
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 51 tctagattcattaacatatatatgaatgtgggcaatgctagaa 9
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaa 204
||||||||||| |||||||||||| ||||||||||
Sbjct: 71 tcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 166
|||||||||||||||| | ||||||||||| |||||||||| | ||| |||| |||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacg 14
Query: 167 ga 168
||
Sbjct: 13 ga 12
Score = 48.1 bits (24), Expect = 5e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||||||||||||||||||||| || | | | || |||| ||||| | ||||||||||
Sbjct: 84 tatgtctagattcattaacatctatgggtacataggcaatgttagaaagtcttacattgt 143
Query: 161 gaaacgga 168
||||||||
Sbjct: 144 gaaacgga 151
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaa 147
|||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaa 104
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaa 204
||||||||||| |||||||||||| ||||||||||
Sbjct: 69 tcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
|||||||||| |||||||| | ||| |||||||||||||||||| ||||||||||||
Sbjct: 106 tactccctccatttcacaa-tgtaaatcattttagcatttttcatatttatattgat 51
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||| |||||||| ||| || |||||||| ||||| |||||||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 146 aatgacttacattgtgaaacgga 168
|||||||||||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||| |||||||| || | |||||||||| |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 165 c 165
|
Sbjct: 15 c 15
Score = 65.9 bits (33), Expect = 2e-10
Identities = 94/112 (83%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 60 aatataagtcattttagcatttttcacatttatattgatgtta-tg--tctagattcatt 116
|||||||||| || ||||||| ||| ||| |||| ||||||| || ||||||||||||
Sbjct: 22 aatataagtctttctagcattgctcatattcatatagatgttaatgaatctagattcatt 81
Query: 117 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
| |||| |||||||| |||| |||||||||| | |||| ||| |||||||||
Sbjct: 82 agcatctatatgaatatgggtaatgctagaaagtcttatattatgaaacgga 133
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatg 141
||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 45 tatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatg 141
|||||||||||| |||| |||||||||||||||||||||||
Sbjct: 72 tatgtctagatttattagcatcaatatgaatgtgggaaatg 112
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatg 198
|||||| ||||||||||||||||| |||||
Sbjct: 34 tcattagcatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 128 gaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
|||||||| || |||||||||||||||||||||||||||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacgga 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 185 gaatgtggaaaatgctagaatgacttaca 213
||||||||||| |||||||||||||||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttaca 24
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 107 tagattcattaacatcaatatgaatgtgggaaatgctagaa 147
|||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaa 104
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctagaa 204
||||||||||| |||||||||||| ||||||||||
Sbjct: 69 tcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 136 gaaatgctagaatgacttacattgtgaaacgga 168
|||||||||||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacgga 12
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatt 89
|||||| ||||||||| || |||||||||||||||||||| |||||||
Sbjct: 91 tactccatccgtttcataa-tataagtcattttagcatttctcacatt 45
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctag 145
|||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 41 tctagattcattaatatcaatatgaacgtgggaaatgctag 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctag 145
|||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 51 tctagattcattaatatcaatatgaacgtgggaaatgctag 91
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctag 202
||||||| ||||||||||| |||| |||||||||
Sbjct: 34 tcattaatatcaatatgaacgtgggaaatgctag 1
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 169 tcattaacatcaatatgaatgtggaaaatgctag 202
||||||| ||||||||||| |||| |||||||||
Sbjct: 58 tcattaatatcaatatgaacgtgggaaatgctag 91
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||||||||||||| ||| |||||||| |||||||||| | |||||||| |||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 165 c 165
|
Sbjct: 15 c 15
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 124 atatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
||||||||||||| |||||||||| | |||||||| |||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaa 119
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 103 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 147
|||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 53 tgtctagattcattaacatctatatgaatgtgggtgatgctagaa 9
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 147
|||||||||||||||| ||||| ||||||||||| | |||||||||
Sbjct: 60 tatgtctagattcatttacatctatatgaatgtgtgtgatgctagaa 106
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 9e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||||||||||||||| |||| ||||||||||||| |||| ||||| | |||| | | |
Sbjct: 64 tatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatat 123
Query: 161 gaaacgga 168
||||||||
Sbjct: 124 gaaacgga 131
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 63.9 bits (32), Expect = 9e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
||||| |||||||| ||||||| | |||||||||| || |||||||| | ||||||||||
Sbjct: 66 tatgtttagattcaataacatctaaatgaatgtggcaa-tgctagaaagtcttacattgt 124
Query: 161 gaaacgga 168
||||||||
Sbjct: 125 gaaacgga 132
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 63.9 bits (32), Expect = 9e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 101 tatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 160
|||| |||||||| |||||||| ||||||||||||| |||||||||| | |||| | | |
Sbjct: 79 tatgcctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatat 20
Query: 161 gaaacgga 168
||||||||
Sbjct: 19 gaaacgga 12
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 110 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 165
||||||||| ||| ||||||||||||| || ||||||| | |||||||||||||||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaac 104
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 63.9 bits (32), Expect = 9e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 105 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 164
|||||||| ||||||||| |||||||||||| |||||||||| | |||||||| |||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Score = 54.0 bits (27), Expect = 8e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgacttaca 213
||||||||| ||||||||||||| |||||||||| | ||||||
Sbjct: 66 attaacatctatatgaatgtggacaatgctagaaagtcttaca 24
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 114 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 168
||||| |||||||| |||||| |||| |||||||||||| ||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacgga 101
Score = 58.0 bits (29), Expect = 5e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 42 tactccctccgtttcacaaatataagtcattttagcatttttcacatttatattgat 98
|||| |||||||||||||| | |||||||| ||| |||||||||||||||||||||
Sbjct: 108 tacttcctccgtttcacaa-tgcaagtcattctagtatttttcacatttatattgat 53
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 143 tagaatgacttacattgtgaaacgga 168
||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacgga 12
Score = 48.1 bits (24), Expect = 5e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 171 attaacatcaatatgaatgtggaaaatgctagaatgactt 210
||||| |||||||| |||||| ||||| ||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgactt 86
