miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 147 bits (74), Expect = 5e-35
Identities = 102/110 (92%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacatg-tctagattcattaacatcaatatg 86
|||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattttccatattatctagattcattaacatcaatatg 76
Query: 87 aatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtagta 136
||||| |||||||||||||||||||||||| |||||| |||| |||||||
Sbjct: 77 aatgtaggaaatgctagaatgacttacattatgaaacggagggagtagta 126
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 95 aaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||||||||||||||||||| |||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 14 tactactctctccgtt-cacaatgtaagtcattttagcattt 54
|||||||| ||||||| || ||||||||||||| ||||||||
Sbjct: 126 tactactccctccgtttcataatgtaagtcattctagcattt 85
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 145 bits (73), Expect = 2e-34
Identities = 76/77 (98%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 120 aaacagaggaagtagta 136
|||| ||||||||||||
Sbjct: 18 aaacggaggaagtagta 2
Score = 127 bits (64), Expect = 5e-29
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 138
Query: 123 cagaggaagtag 134
| |||| |||||
Sbjct: 139 cggagggagtag 150
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||| ||||||| |||||||||||||||| |||||||| ||||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacat 104
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 141 bits (71), Expect = 3e-33
Identities = 111/122 (90%), Gaps = 3/122 (2%)
Strand = Plus / Minus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacatg--tctagattca 72
|||||| ||||||| |||||||||||||||| |||||||| |||||| | ||||||||
Sbjct: 125 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagattca 66
Query: 73 ttaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagt 132
|||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 65 ttaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 133 ag 134
||
Sbjct: 5 ag 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
|||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 125
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 139 bits (70), Expect = 1e-32
Identities = 73/74 (98%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 147
Query: 123 cagaggaagtagta 136
| ||||||||||||
Sbjct: 148 cggaggaagtagta 161
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 78 atgtatagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttcca 58
|||||||||||||||||| ||||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattttcca 47
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 146 ttcacaatgtaagtcattctagcatttcccacat 113
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 144
Query: 120 aaacagaggaagtagt 135
|||| |||| ||||||
Sbjct: 145 aaacggagggagtagt 160
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 72 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaag 131
||||| || ||||||||||||| |||||||| |||||||||||||||||||| |||| ||
Sbjct: 66 attaatataaatatgaatgtggaaaatgctataatgacttacattgtgaaacggagggag 7
Query: 132 ta 133
||
Sbjct: 6 ta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattatagcattttccacat 50
Score = 56.0 bits (28), Expect = 1e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 15 actactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
||||||| ||||||| |||||||||||||||| |||||||| ||||||
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcatttcccacat 113
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 131 bits (66), Expect = 3e-30
Identities = 69/70 (98%)
Strand = Plus / Minus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Query: 124 agaggaagta 133
|||||||||
Sbjct: 14 ggaggaagta 5
Score = 123 bits (62), Expect = 7e-28
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atgtttagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 143
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 144 aaacggagggagta 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 145 ttcacaatgtaagtcattctagcatttcccacat 112
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 131 bits (66), Expect = 3e-30
Identities = 72/74 (97%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 18 aaacggaggtagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 83 acatcaatatgtatgtacaaaatgctagaatgacttacattgtgaaacggaggaagta 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 129 bits (65), Expect = 1e-29
Identities = 71/73 (97%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 121 aacagaggaagta 133
||| |||||||||
Sbjct: 17 aacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 75 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
|||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagtag 136
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 129 bits (65), Expect = 1e-29
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 89 atgtctagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtg 148
Query: 120 aaacagaggaagtagta 136
|||| |||| |||||||
Sbjct: 149 aaacggagggagtagta 165
Score = 83.8 bits (42), Expect = 6e-16
Identities = 67/75 (89%), Gaps = 4/75 (5%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatca----atatgaatgtgggaaatgctagaatgacttacattgt 118
||||||||||||||||||| ||||||| || |||||||||||||||||||||||||
Sbjct: 79 tctagattcattaacatcactatgtatgaatatgcgaaatgctagaatgacttacattgt 20
Query: 119 gaaacagaggaagta 133
||||| |||||||||
Sbjct: 19 gaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 14 tactactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||||| ||||||| |||||||||||||||| |||||||| ||||||
Sbjct: 165 tactactccctccgtttcacaatgtaagtcattctagcatttcccacat 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 129 bits (65), Expect = 1e-29
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 122 gagggagta 130
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 72 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaag 131
|||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 132 ta 133
||
Sbjct: 2 ta 1
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 125 bits (63), Expect = 2e-28
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 56 atgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatg 115
Query: 120 aaacagaggaagtag 134
|||| ||||||||||
Sbjct: 116 aaacggaggaagtag 130
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| ||||||||||||| |||||||| ||||||
Sbjct: 117 ttcataatgtaagtcattctagcatttcccacat 84
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 125 bits (63), Expect = 2e-28
Identities = 66/67 (98%)
Strand = Plus / Minus
Query: 67 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacaga 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 127 ggaagta 133
|||||||
Sbjct: 11 ggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 67 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacaga 126
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 127 ggaagta 133
|| ||||
Sbjct: 135 gggagta 141
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 125 bits (63), Expect = 2e-28
Identities = 100/112 (89%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccac----atgtctagattcattaacatcaat 83
|||||||||||||||||| |||||||| |||| || | || ||||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacgttcatatatatattcattaatatcaat 76
Query: 84 atgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtagt 135
|||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 77 atgaatgttggaaatgctagaatgacttacattgtgaaacggaggaagtagt 128
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||| |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 125 bits (63), Expect = 2e-28
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 132
Query: 120 aaacagaggaagtag 134
|||| |||| |||||
Sbjct: 133 aaaccgagggagtag 147
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 125 gaggaagtag 134
||||||||||
Sbjct: 13 gaggaagtag 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| ||||||||||||| |||||||||||||||
Sbjct: 17 ttcataatgtaagtcattctagcattttccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 134 ttcacaatgtaagtcattctagcatttcccacat 101
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 69/71 (97%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 93.7 bits (47), Expect = 6e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| ||||||||| |||||||||||| ||| ||||||||| |||||||||
Sbjct: 88 tctagattcattaccatcaatattaatgtgggaaattctaaaatgacttagattgtgaaa 147
Query: 123 cagaggaagtagtac 137
| |||| ||||||||
Sbjct: 148 cggagggagtagtac 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 45/50 (90%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 13 gtactactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
||||||||| ||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 162 gtactactccctccgtttcacaatctaagtcattttagaatttcccacat 113
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 125 bits (63), Expect = 2e-28
Identities = 69/71 (97%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 83 atgtccagattcattaacatcaatataaacgtgggaaatgctagaatgacttatattgtg 142
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 143 aaacggaggaagta 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 125 bits (63), Expect = 2e-28
Identities = 113/130 (86%), Gaps = 11/130 (8%)
Strand = Plus / Plus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat----------gtc 64
|||||| ||||||| |||||||||||||||| ||||||||||||||| ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 125 gaggaagtag 134
||||||||||
Sbjct: 124 gaggaagtag 133
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 75 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 125 bits (63), Expect = 2e-28
Identities = 69/71 (97%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 79 atgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgacttatattgtg 138
Query: 120 aaacagaggaagtagta 136
|||| |||| |||||||
Sbjct: 139 aaacggagggagtagta 155
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 69/71 (97%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 117 bits (59), Expect = 4e-26
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 85 atgtctacattcattaacatcaatatgaatgtgggaaatattagaatgacttacattgtg 144
Query: 120 aaacagaggaagtag 134
|||| ||||||||||
Sbjct: 145 aaacggaggaagtag 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgtctagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtg 19
Query: 120 aaacagaggaagtag 134
|||| |||| |||||
Sbjct: 18 aaacggagggagtag 4
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 90 tagattcattaatatcaatatgaatgtggaaaatgttagaatgacttacattgtgaaacg 149
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 150 gagggagta 158
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||| ||||||| |||||||||||||||| |||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| || ||||||||||||
Sbjct: 146 ttcacaatgtaagtcattctaacattttccacat 113
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 123 bits (62), Expect = 7e-28
Identities = 95/107 (88%), Gaps = 8/107 (7%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacatgtctagattcattaacatcaatatga 87
|||||||||||||||||| |||||||| |||||| ||||||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat--------tcattaacatcaatatga 68
Query: 88 atgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
|||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 69 atgtaggaaatgctagaatgacttacattgtgaaacggaggaagtag 115
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 84 atgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 123 bits (62), Expect = 7e-28
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 121 aacagaggaagtag 134
||| ||||||||||
Sbjct: 132 aacggaggaagtag 145
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 127
|||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 128 gaagta 133
| ||||
Sbjct: 10 ggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 132 ttcacaatgtaagtcattctagcatttcccacat 99
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 123 bits (62), Expect = 7e-28
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 78 atgtctagattcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 80 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattatga 139
Query: 121 aacagaggaagtag 134
||| |||| |||||
Sbjct: 140 aacggagggagtag 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||| ||||||| || ||||||||||||| |||||||| ||||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacat 107
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| || ||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctatcatttcccacat 50
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 123 bits (62), Expect = 7e-28
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 78 atgtctagattcattaacattaatataaatgtgggaaatgctagaatgacttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 136 ttcacaatgtaagtcattctagcatttcccacat 103
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 123 bits (62), Expect = 7e-28
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 142
Query: 120 aaacagaggaagta 133
||| |||| ||||
Sbjct: 143 gaacggagggagta 156
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 78 atgtctacattcattaacatcaatatgaatgtagaaaatgctagaatgacttacattgtg 19
Query: 120 aaacagaggaagta 133
||| |||||||||
Sbjct: 18 gaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 17 tactctctccgttc-acaatgtaagtcattttagcattttccacat 61
||||| |||||||| ||||||||||||||| |||||||| ||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacat 111
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 30 cacaatgtaagtcattttagcattttccacat 61
|||||||||||||||| |||||||||| ||||
Sbjct: 19 cacaatgtaagtcattctagcattttctacat 50
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 123 bits (62), Expect = 7e-28
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtg 121
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 122 aaacggaggaagta 135
Score = 83.8 bits (42), Expect = 6e-16
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 81 aatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 123 ttcacaatgtaagtcattctagcatttcccacat 90
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 121 aacagaggaagta 133
||| |||| ||||
Sbjct: 127 aacggagggagta 139
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 84 atgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||| |||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 127 ttcacaatgtaagtcattctagcattt 101
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 121 aacagaggaagta 133
||| |||| ||||
Sbjct: 17 aacggagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 84 atgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||| |||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 121 bits (61), Expect = 3e-27
Identities = 105/119 (88%), Gaps = 8/119 (6%)
Strand = Plus / Plus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacatgtctagattcatt 74
|||||| ||||||| |||||||||||||||| |||||| || ||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcat-------atatctagattcatt 56
Query: 75 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 57 aatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 97 atgctagaatgacttacattgtgaaacagaggaagtag 134
||||||||||||||||||||||||||| |||| |||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagtag 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| ||||||||||||| |||||||| ||||||
Sbjct: 103 ttcataatgtaagtcattctagcatttcccacat 70
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagtagt 135
| |||| ||||||
Sbjct: 15 cggagggagtagt 3
Score = 63.9 bits (32), Expect = 6e-10
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 15 actactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
||||||| ||||||| |||||||||||||||| |||||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcattctagcattttccacat 50
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 87 aatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
||||||||||||| ||||||||||| |||| |||||| ||||||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacggaggaagtag 135
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 73/77 (94%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 78 atgtctagattcattaacatcaatatgaatgtgggtaatgctataatgacttacattgtg 19
Query: 120 aaacagaggaagtagta 136
|||| |||| |||||||
Sbjct: 18 aaacggagggagtagta 2
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 88 tctagattcattaacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 147
Query: 123 cagaggaagtag 134
| ||||||||||
Sbjct: 148 cggaggaagtag 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||| |||||||||||||||||| ||||||
Sbjct: 146 ttcacaatataagtcattttagcatttcccacat 113
Score = 50.1 bits (25), Expect = 8e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 14 tactactctctccgtt-cacaatgtaagtcattttagcatt 53
|||||||| ||||||| |||||||||||||||| |||||||
Sbjct: 2 tactactccctccgtttcacaatgtaagtcattatagcatt 42
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 119 bits (60), Expect = 1e-26
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 66 agattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacag 125
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 126 aggaagta 133
||||||||
Sbjct: 12 aggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 72 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaag 131
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 132 ta 133
||
Sbjct: 136 ta 137
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 62 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 121
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 87 gtctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaa 146
Query: 122 acagaggaagta 133
|| |||| ||||
Sbjct: 147 acggagggagta 158
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
|||||||||||| |||| |||||||||||| |||||||||||||| |||||||||||||
Sbjct: 74 ctagattcattagcatctatatgaatgtggacaatgctagaatgacatacattgtgaaac 15
Query: 124 agaggaagta 133
|||||||||
Sbjct: 14 ggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||||||||||
Sbjct: 146 ttcacaatgtaagtcattctagcattttccacat 113
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
||||||||||| |||||| ||||||| |||||||
Sbjct: 17 ttcacaatgtatgtcattctagcattgtccacat 50
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 119 bits (60), Expect = 1e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 67 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacaga 126
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 127 ggaagtag 134
||||||||
Sbjct: 128 ggaagtag 135
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
|||||||||||||||||| |||||| | ||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaac 15
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
||||||||||||||||||||||||||| ||||||
Sbjct: 122 ttcacaatgtaagtcattttagcatttcccacat 89
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 117 bits (59), Expect = 4e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 78 atgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtg 19
Query: 120 aaacagaggaagtag 134
|||| |||| |||||
Sbjct: 18 aaacggagggagtag 4
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/70 (91%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 90 tagatttattaacatcaatataaatgtg--aaatgctagaatgacttacattgtgaaacg 147
Query: 125 gaggaagtag 134
|||| |||||
Sbjct: 148 gagggagtag 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattt 54
|||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattctagcattt 118
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 117 bits (59), Expect = 4e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| || ||||||
Sbjct: 15 cggaagaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||| |||||||| ||| ||| |||||||||||||||||||||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 138 gagggagta 146
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttcca 58
|||||||||||||||||| ||||||||||||
Sbjct: 134 ttcacaatgtaagtcattctagcattttcca 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 117 bits (59), Expect = 4e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| ||
Sbjct: 85 atgtctagattcattaccatcaatatgaatgtgggaaatggtggaatgacttacattatg 144
Query: 120 aaacagaggaagtagta 136
|||| || | |||||||
Sbjct: 145 aaacggaaggagtagta 161
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 4e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 78 atgtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtg 19
Query: 120 aaacagaggaagtag 134
|||| |||| |||||
Sbjct: 18 aaacggagggagtag 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||| ||||||||||||||| |||||||||||||||||| |||||| |||
Sbjct: 90 tagattcattaatatcaatatgaatgtgaaaaatgctagaatgacttatattgtggaacg 149
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 150 gagggagta 158
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||| ||||||| |||||||||||||||| |||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 117 bits (59), Expect = 4e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| || ||||||
Sbjct: 15 cggaagaagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||| |||||||| ||| ||| |||||||| ||||||||||||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 138 gagggagta 146
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttcca 58
|||||||||||||||||| ||||||||||||
Sbjct: 134 ttcacaatgtaagtcattatagcattttcca 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 117 bits (59), Expect = 4e-26
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 83 atgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtg 142
Query: 120 aaacagaggaagtag 134
|||| |||| |||||
Sbjct: 143 aaacggagggagtag 157
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/70 (91%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 71 tagatttattaacatcaatataaatgtg--aaatgctagaatgacttacattgtgaaacg 14
Query: 125 gaggaagtag 134
|||| |||||
Sbjct: 13 gagggagtag 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattt 54
|||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 4e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||
Sbjct: 85 atgtctatattcattaacatcaatatgaatgcggaatatgctagaatgacttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattt 43
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttcc 57
|||||||||||||||||| |||||| ||||
Sbjct: 146 ttcacaatgtaagtcattctagcatattcc 117
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 117 bits (59), Expect = 4e-26
Identities = 65/67 (97%)
Strand = Plus / Minus
Query: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagg 128
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 129 aagtagt 135
|||||||
Sbjct: 9 aagtagt 3
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 117 bits (59), Expect = 4e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 117 bits (59), Expect = 4e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 130 cggaggaagta 140
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 117 bits (59), Expect = 4e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 126 cggagggagta 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| || ||||| ||||||
Sbjct: 124 ttcacaatgtaagtcattctaacatttcccacat 91
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 117 bits (59), Expect = 4e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 85 atgtctagattcattaacaacaatatgaatgtgggaaatactagaatgacttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattttccacat 50
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| ||| |||| ||||||
Sbjct: 146 ttcacaatgtaagtcattctagtatttcccacat 113
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 117 bits (59), Expect = 4e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 117 cggaggaagta 127
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 94 gaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 125 gaggaagtag 134
||||||||||
Sbjct: 13 gaggaagtag 4
Score = 107 bits (54), Expect = 4e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagg 128
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaaccgagg 144
Query: 129 aagtag 134
|||||
Sbjct: 145 gagtag 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| ||||||||||||| |||||||||||||||
Sbjct: 17 ttcataatgtaagtcattctagcattttccacat 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 137 ttcacaatgtaagtcattctagcattt 111
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||
Sbjct: 78 atgtctagattcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 88 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattgtgata 147
Query: 123 cagaggaagtag 134
| |||| |||||
Sbjct: 148 cggagggagtag 159
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 16 ctactctctccgt-tcacaatgtaagtcattttagcattttccacat 61
|||||| |||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 159 ctactccctccgtatcacaatgtaagtcattctagcatttcccacat 113
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||||| |||||| ||||||
Sbjct: 17 ttcacaatgtaagtcatttttgcatttcccacat 50
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 78 atgtctagattcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 88 tctagattcattaactaatatatgaatgtgagaaatgctagaatgacttacattgtgaaa 147
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 148 cggaggaagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 146 ttcacaatgtaagtcattctagcattt 120
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| || ||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctatcatttcccacat 50
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 124 agaggaagta 133
|||||||||
Sbjct: 14 ggaggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 71 cattaacatcaatatgaatgtgggaaatgctaga-atgacttacattgtgaaacagagga 129
||||| |||||||||||||||||||||||||| | ||||||||||||||||||| ||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 139
Query: 130 agtagt 135
||||||
Sbjct: 140 agtagt 145
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
||||||||||||||||||||||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattttagcatttcccacat 50
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 67 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacaga 126
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 127 ggaagtagta 136
|| |||||||
Sbjct: 11 gggagtagta 2
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 67 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacaga 126
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 127 ggaagta 133
|| ||||
Sbjct: 132 gggagta 138
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 124 agaggaagta 133
|||||||||
Sbjct: 134 ggaggaagta 143
Score = 83.8 bits (42), Expect = 6e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 71 cattaacatcaatatgaatgtgggaaatgctaga-atgacttacattgtgaaacagagga 129
||||| |||||||||||||||||||||||||| | ||||||||||||||||||| ||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 9
Query: 130 agtagt 135
||||||
Sbjct: 8 agtagt 3
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
||||||||||||||||||||||||||| ||||||
Sbjct: 131 ttcacaatgtaagtcattttagcatttcccacat 98
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 78 atgtctagattcattaatatcaatatgaatgtgggaaatgttagaatgacttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 88 tctagattcattaaaatcaatatgaatgtgaaaaatactagaatgacttacattgtgaaa 147
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 148 cggagggagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| || ||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctaacatttcccacat 50
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| ||| ||||| |||||
Sbjct: 146 ttcacaatgtaagtcattctagtatttttcacat 113
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 85 atgtctagattcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaac 15
Query: 124 agaggaagta 133
|||||||||
Sbjct: 14 ggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 146 ttcacaatgtaagtcattctagcattt 120
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcatt 53
|||||||||||||||||| |||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 115 bits (58), Expect = 2e-25
Identities = 95/106 (89%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacatgtctagattcattaacatcaatatga 87
||||||||||||||||||||||||||| |||||| || ||||||||||||| ||| |
Sbjct: 17 ttcacaatgtaagtcattttagcatttcccacattcatat-ttcattaacatcagtataa 75
Query: 88 atgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||||||||||||||| |||||||||| |||| ||||
Sbjct: 76 atgtgggaaatgctagaatgacttagattgtgaaacggagggagta 121
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 81 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 67 atgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtg 126
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 127 aaacggagggagta 140
Score = 107 bits (54), Expect = 4e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 72 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaag 131
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 132 ta 133
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 113 bits (57), Expect = 7e-25
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||| |||||||||||||| | ||||||||||||||||||| ||||||||||||||||
Sbjct: 78 atgtcttgattcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtg 19
Query: 120 aaacagaggaagtagta 136
|||| ||||||||||||
Sbjct: 18 aaacggaggaagtagta 2
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| ||||||||||| |||||||| |||||||| |||| ||||||
Sbjct: 88 tagattcattaacatctatatgaatgtgaaaaatgctaaaatgacttgcattatgaaacg 147
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 148 gagggagta 156
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
||||||||||||||||||||||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattttagcatttcccacat 50
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| |||| |||||||||||||||||| |||||
Sbjct: 144 ttcataatgcaagtcattttagcatttttcacat 111
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 125 gaggaagta 133
|||||||||
Sbjct: 138 gaggaagta 146
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattttccacat 50
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 30 cacaatgtaagtcattttagcattttccacat 61
|||||||||||||||| |||||||| ||||||
Sbjct: 132 cacaatgtaagtcattctagcatttcccacat 101
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 85 atgtctagattcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtg 144
Query: 120 aaacagagg 128
|||| ||||
Sbjct: 145 aaacggagg 153
Score = 77.8 bits (39), Expect = 4e-14
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 79 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagg 128
|||||||||||||| || ||||||||||||||||||||||||||| ||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacattgtgaaacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 146 ttcacaatgtaagtcattctagcattt 120
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 127
|||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 128 gaagtagta 136
|||||||||
Sbjct: 10 gaagtagta 2
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
|||||||||||||| ||| |||||||||||||||||||||| ||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaac 119
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 113 bits (57), Expect = 7e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatga 18
Query: 121 aacagaggaagta 133
||| |||||||||
Sbjct: 17 aacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 81 aatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaa 119
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 62 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 121
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 122 acagaggaagta 133
|| |||| ||||
Sbjct: 134 acggagggagta 145
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
||||||| |||||||||||||| |||||| ||||||||||||||||||||||| ||||||
Sbjct: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 15
Query: 124 agaggaagt 132
||||||||
Sbjct: 14 ggaggaagt 6
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttcca 58
|||||||||||||||||| ||||||||||||
Sbjct: 133 ttcacaatgtaagtcattctagcattttcca 103
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 62 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 121
||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gtctagattcattaatataagtatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 122 acagaggaagta 133
|| |||||||||
Sbjct: 16 acggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 85 atgtctagattcattagcatcaatatggatgtgagaaatgctaaaatgacttacattgtg 144
Query: 120 aaacagaggaagtag 134
|||| |||| |||||
Sbjct: 145 aaacggagggagtag 159
Score = 56.0 bits (28), Expect = 1e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattt 54
|||||| ||||||| |||||||||||||||||||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattttagcattt 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 78 atgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtg 19
Query: 120 aaac 123
||||
Sbjct: 18 aaac 15
Score = 71.9 bits (36), Expect = 2e-12
Identities = 58/66 (87%), Gaps = 7/66 (10%)
Strand = Plus / Plus
Query: 58 acatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 117
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 75 acatatctagattcattaacatcaatatgaa-------aatgctagaatgacttacattg 127
Query: 118 tgaaac 123
||||||
Sbjct: 128 tgaaac 133
Score = 58.0 bits (29), Expect = 3e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 17 tactctctccgtt-cacaatgtaagtcattttagcattttc 56
||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 143 tactctctccgtttcacaatgtaagtcattctagcattttc 103
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||||||||||| |||||||||||||||| || ||||| ||||||
Sbjct: 4 ctactctctccgtttcacaatgtaagtcattctaacatttcccacat 50
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaa 16
Query: 123 cagaggaagtag 134
| ||||||||||
Sbjct: 15 cggaggaagtag 4
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| ||||||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 85 atgtctagattcattatcatcaatataaatgtgaaaaatgctagaatggcttatattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 70 tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagga 129
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 130 agta 133
||||
Sbjct: 127 agta 130
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 73 ttaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagt 132
|||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 133 a 133
|
Sbjct: 5 a 5
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 85 atgtctagattcattaacattaatatgaatgtggagaatgctagaatgacttacattgtg 144
Query: 120 aaacagaggaagtagt 135
|||| |||| ||||||
Sbjct: 145 aaacggagggagtagt 160
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 75 tctagattcattaacactaatatgaatgtgggaaatgctaaaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
||||||||||||||||||||||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattttagcatttcccacat 50
Score = 56.0 bits (28), Expect = 1e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 15 actactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
||||||| ||||||| |||||||||||||||| ||||||| |||||||
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcattctccacat 113
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 88 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 147
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 148 cggagggagta 158
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||| ||||||||||||| ||| | |||||||||||| |||||||||
Sbjct: 75 tctagattcattaacattaatatgaatgtggaaaaagttagaatgacttatattgtgaaa 16
Query: 123 cagaggaagtagta 136
| ||||||||||||
Sbjct: 15 cggaggaagtagta 2
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctagagtcattaacatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| ||||||||||||| | | |||||||||||||||||| ||||||
Sbjct: 85 atgtctagattcattagcatcaatatgaatatagaaaatgctagaatgacttatattgtg 144
Query: 120 aaacagaggaagtagt 135
|||| |||| ||||||
Sbjct: 145 aaacggagggagtagt 160
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattttccacat 50
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 75 tctagattcattaccatcaatatgaatgtgagaaatgctagaatgacttacattgcgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||||||
Sbjct: 87 tctagattcattaacattaatataaatatgggaaatgttagaatgacttacattgtgaaa 146
Query: 123 cagaggaagtagt 135
| |||| ||||||
Sbjct: 147 cggagggagtagt 159
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 125 cggagggagta 135
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 74 taacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 85 atgtctagattcattagcatcaatatgaatgtggtaaatgttagaatgacttacattgtg 144
Query: 120 aaacagaggaagtag 134
|||| |||| |||||
Sbjct: 145 aaacggagggagtag 159
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||| ||||||| |||||||||||||||| || ||||| ||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctaacatttaccacat 113
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 71 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaa 130
|||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaa 139
Query: 131 gta 133
|||
Sbjct: 140 gta 142
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||| ||
Sbjct: 66 atgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatg 125
Query: 120 aaacagaggaagtag 134
|||| ||||||||||
Sbjct: 126 aaacggaggaagtag 140
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 74 taacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||| || |||||| |||||||||||||||||||||| |||||| |||| ||||
Sbjct: 64 taacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagggagta 5
Query: 134 g 134
|
Sbjct: 4 g 4
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||
Sbjct: 88 tctagattcattaacatcaatataaatgtgggaaatgctaaaatgacttactttgtgaaa 147
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 148 cggaggaagta 158
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||| ||||||||||| |||||||||||||| | |||||||||| |||||
Sbjct: 78 atgtctagattcataaacatcaatataaatgtgggaaatgcaaaaatgacttactttgtg 19
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
||||||| ||||||||||||||||||| ||||||
Sbjct: 146 ttcacaaagtaagtcattttagcatttcccacat 113
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
||||||| |||||||||||| |||||| ||||||
Sbjct: 17 ttcacaaagtaagtcatttttgcatttcccacat 50
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 107 bits (54), Expect = 4e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 72 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaag 131
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 132 ta 133
||
Sbjct: 6 ta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 67 atgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtg 126
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 127 aaacggagggagta 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||| ||||||||| |||||||||||||||
Sbjct: 128 ttcacaatataagtcattctagcattttccacat 95
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| ||
Sbjct: 78 atgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 85 atgtctagattcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||| | | |||| |||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatttctagtgaaaatactagaatgacttacattgtgaaa 16
Query: 123 cagaggaagtag 134
| |||| |||||
Sbjct: 15 cggagggagtag 4
Score = 44.1 bits (22), Expect = 5e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttc 56
|||||| ||||||| |||||||||||||||| ||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagtattttc 45
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 107 bits (54), Expect = 4e-23
Identities = 97/111 (87%), Gaps = 4/111 (3%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacatgtcta----gattcattaacatcaat 83
|||||||| ||||||||| ||||||||||||||| | || |||||||||| ||||||
Sbjct: 17 ttcacaatataagtcattctagcattttccacatttatatttagattcattaatatcaat 76
Query: 84 atgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
|||||| || ||||||||||||||||||||||| |||||| |||| |||||
Sbjct: 77 atgaatatgagaaatgctagaatgacttacattatgaaacggagggagtag 127
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 81 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
||||| ||||||| |||||||||||||||||| |||||||||| ||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 84 atgtctagattcattaacatcaatatgaatgtggaaaatattagaatgacttacattgtg 143
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 144 aaacggagggagta 157
Score = 77.8 bits (39), Expect = 4e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| |||
Sbjct: 74 tctagattcattaatatcaatatgaatgtgggaaa-actagaataacttacattgtaaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| || |||||||||||
Sbjct: 145 ttcacaatgtaagtcattctaatattttccacat 112
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||
Sbjct: 85 atgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 83.8 bits (42), Expect = 6e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 116
|||||||||||||||| | |||||||||||||||||| ||||||||||||||||
Sbjct: 75 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 22
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||||||||||
Sbjct: 146 ttcacaatgtaagtcattctagcattttccacat 113
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 57 atgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtg 116
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 117 aaacggaggaagta 130
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||| ||||||||||||| |||||||||||||||| |||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 118 ttcacaatgtaagtcattctagcatttcccacat 85
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 107 bits (54), Expect = 4e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 127
||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 128 gaagta 133
||||||
Sbjct: 10 gaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||| ||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 107 bits (54), Expect = 4e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagg 128
||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 129 aagtag 134
||||||
Sbjct: 147 aagtag 152
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagg 128
|||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 129 aagta 133
||||
Sbjct: 9 gagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| ||| |||| ||||||
Sbjct: 139 ttcacaatgtaagtcattctagtatttcccacat 106
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||
Sbjct: 76 atgtctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtg 135
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 136 aaacggagggagta 149
Score = 79.8 bits (40), Expect = 9e-15
Identities = 64/71 (90%), Gaps = 7/71 (9%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 68 tctagattcattaacatcaat------gtgggaaatgctagaa-gacttacattgtgaaa 16
Query: 123 cagaggaagta 133
|||||||||||
Sbjct: 15 cagaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||| ||||||||||||||||||
Sbjct: 137 ttcacaatataagtcattttagcattt 111
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct: 78 atgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattatg 19
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 83 tatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaagta 145
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 31 acaatgtaagtcattttagcattttccacat 61
||||||||||||||| |||||||| ||||||
Sbjct: 130 acaatgtaagtcattctagcatttcccacat 100
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||| |||||||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 63 atgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtg 122
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 123 aaacggaggaagta 136
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 85 tgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||| ||||||| |||||||||||||||| |||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattt 54
||||||||| |||||||||||||||||
Sbjct: 124 ttcacaatgcaagtcattttagcattt 98
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 65 atgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtg 124
Query: 120 aaacagagg 128
|||| ||||
Sbjct: 125 aaacggagg 133
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagg 128
||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 126 ttcacaatgtaagtcattctagcattt 100
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 121 aacagaggaagta 133
||| |||||||||
Sbjct: 17 aacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| | |||||| | | ||||||| || | |||||||| ||
Sbjct: 83 atgtctagattcattaacatctagatgaatataagcaatgctacaaagtcttacattatg 142
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 143 aaacggagggagta 156
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatggtagaatgacttacattgtgaaa 16
Query: 123 c 123
|
Sbjct: 15 c 15
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||| ||||| |||||| | | |||||||||||||||||||||||||
Sbjct: 85 atgtctagattcattaatatcaacatgaatttagaaaatgctagaatgacttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttc 56
|||||||||||||||||| ||||||||||
Sbjct: 146 ttcacaatgtaagtcattctagcattttc 118
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 66 agattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacag 125
||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| |
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 126 aggaagtag 134
|||||||||
Sbjct: 128 aggaagtag 136
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 70 tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagga 129
||||||| |||||| |||||||| ||||||||||||||||||| |||||||||| ||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 130 agtagt 135
||||||
Sbjct: 8 agtagt 3
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 tagattcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 149
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 150 gagggagta 158
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| ||||||||||| |||||| || ||||||||||| ||||
Sbjct: 78 atgtctagattcattaacatctatatgaatgtgagaaatgataaaatgacttacaatgtg 19
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 146 ttcacaatgtaagtcattctagcatttcccacat 113
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 121 aacagaggaagta 133
||| |||| ||||
Sbjct: 135 aacggagggagta 147
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 72 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaag 131
|||||||||||||| |||||| |||| ||| ||||||||||||||||||||||||| ||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaacagagggag 7
Query: 132 ta 133
||
Sbjct: 6 ta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||||||| ||||
Sbjct: 17 ttcacaatgtaagtcattttagtattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||||||| ||||
Sbjct: 135 ttcacaatgtaagtcattttagtattt 109
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 103 bits (52), Expect = 7e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 66 agattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacag 125
|||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||| |
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 126 aggaagta 133
||||||||
Sbjct: 128 aggaagta 135
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 70 tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagga 129
|||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 130 agtag 134
|||||
Sbjct: 8 agtag 4
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 103 bits (52), Expect = 7e-22
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 122 cggagggagta 132
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 123 cagaggaagtag 134
| |||| |||||
Sbjct: 15 cggagggagtag 4
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||| | | |||||||||||||||||| |||||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 135
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 136 cggaggaagta 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||| ||||||| || |||||||||||||||| ||||| ||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattttaccatttcccacat 50
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 123 cagaggaagtag 134
| |||| |||||
Sbjct: 136 cggagggagtag 147
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||| | | |||||||||||||||||| |||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||| ||||||| || |||||||||||||||| ||||| ||||||
Sbjct: 147 ctactccctccgtttcataatgtaagtcattttaccatttcccacat 101
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 103 bits (52), Expect = 7e-22
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 111
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 111
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 49 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 103 bits (52), Expect = 7e-22
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 103 bits (52), Expect = 7e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||| ||||||||| ||||||||||||| |||||||||| | |||||||||||
Sbjct: 61 atgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtg 120
Query: 120 aaacagaggaagtagt 135
|||| |||||||||||
Sbjct: 121 aaacggaggaagtagt 136
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 103 bits (52), Expect = 7e-22
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtagt 135
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtagt 3
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 97 atgctagaatgacttacattgtgaaacagaggaagtagta 136
|||||||| |||||||||||||||||| |||| |||||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagtagta 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 103 bits (52), Expect = 7e-22
Identities = 52/52 (100%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 111
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 93.7 bits (47), Expect = 6e-19
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 111
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 77 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||| || |||| ||| ||||||||||||| |||||| |||| ||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttcca 58
|||||||||||||||||| || |||||||||
Sbjct: 17 ttcacaatgtaagtcattctaacattttcca 47
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| ||||| ||||||||||| |||||||||||||||||| ||| |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 123 cagaggaagta 133
|||||||||||
Sbjct: 15 cagaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
||||||||||||||||||||||||||| ||||||||||||| |||||| |||| |||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagtag 139
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| ||| ||||||||| |||||||||||||||
Sbjct: 17 ttcataatataagtcattctagcattttccacat 50
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 62 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 121
|||||||| |||| ||||||||||||||||||||||| | |||||||||||||| ||||
Sbjct: 84 gtctagatccattggcatcaatatgaatgtgggaaatggtggaatgacttacattatgaa 143
Query: 122 acagaggaagtagt 135
|| |||| ||||||
Sbjct: 144 acggagggagtagt 157
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||| |||||||||| |||||||||||||||| ||||||||||||||||| |||||
Sbjct: 74 tctagatttattaacatcactatgaatgtgggaaatactagaatgacttacattatgaaa 133
Query: 123 cagaggaagta 133
|||||| ||||
Sbjct: 134 cagagggagta 144
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 72 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaag 131
|||||||||| |||||||||| |||||||||||||||||||||| |||||| |||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 132 ta 133
||
Sbjct: 6 ta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| ||||||||||||| ||||||||| |||||
Sbjct: 17 ttcataatgtaagtcattctagcatttttcacat 50
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
|||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagtag 133
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 120 aaacagaggaagta 133
||| |||| ||||
Sbjct: 18 gaacggagggagta 5
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 72 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaag 131
|||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 132 ta 133
||
Sbjct: 137 ta 138
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttc 56
|||||||||||||||||| ||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattttc 45
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 124 cggaggaagta 134
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||| ||||| |||||||||||||||| |||||| |||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttcca 58
||||||||||||||| || ||||||||||||
Sbjct: 122 ttcacaatgtaagtccttctagcattttcca 92
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| ||||||||| ||| || ||||||||| ||||||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 77 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||||||| |||||||| ||||||||| |||||||||| |||| ||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||| |||||||||||| | |||||||||||||||||| ||||||||||| ||||||
Sbjct: 78 atgtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||
Sbjct: 86 tctagattcattaacatgagtatgaatgtgaaaaatgctagaatgacttacattgtgaaa 145
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 146 cggagggagta 156
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| ||||||||| |||||
Sbjct: 144 ttcacaatgtaagtcattctagcatttttcacat 111
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| ||
Sbjct: 59 atgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatg 118
Query: 120 aaacagaggaagta 133
||| |||||||||
Sbjct: 119 aaatggaggaagta 132
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||| | || ||||||||||||||||||||| |||||| |||| ||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 70 tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagga 129
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggg 148
Query: 130 agtag 134
|||||
Sbjct: 149 agtag 153
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattttccacat 50
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||| ||||||| |||||||||||||||| |||| ||||||||||
Sbjct: 153 ctactccctccgtttcacaatgtaagtcattctagccttttccacat 107
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 79 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtagta 136
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtagta 117
Score = 71.9 bits (36), Expect = 2e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||| |||||||||||||||||| |||||||||| |||| ||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||||| ||
Sbjct: 78 atgtctagattcattaacatctatatgaatgtgggcaatactagaaagacttacattatg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||||||||| |||||||| || | |||||||||| | |||||||| |||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgagcaatgctagaaagtcttacattatga 145
Query: 121 aacagaggaagtagt 135
||| |||| ||||||
Sbjct: 146 aacggagggagtagt 160
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagtag 124
Score = 89.7 bits (45), Expect = 1e-17
Identities = 94/108 (87%), Gaps = 3/108 (2%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacatgtcta--gattcattaacatcaatat 85
|||||||||||||||||| ||||| || |||||| || ||| |||||||||||||||
Sbjct: 111 ttcacaatgtaagtcattctagcacttcccacattcatattgat-cattaacatcaatat 53
Query: 86 gaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||| || ||||| ||||||||||||| |||||| |||||||||
Sbjct: 52 gaatgtggaaagtgctaaaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 70 tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagga 129
||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 130 agtag 134
|||||
Sbjct: 8 agtag 4
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 152
Score = 61.9 bits (31), Expect = 2e-09
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||| ||||||| |||||||||||||||| |||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacat 50
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttcca 58
|||||||||||||||||| ||||||||||||
Sbjct: 140 ttcacaatgtaagtcattctagcattttcca 110
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggtaatgctagaatgacttacattatga 145
Query: 121 aacagaggaagta 133
||| |||| ||||
Sbjct: 146 aacggagggagta 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||
Sbjct: 75 tctaaattcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaa 16
Query: 123 cagaggaagtag 134
| ||||||||||
Sbjct: 15 cggaggaagtag 4
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 77 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||| |||||||||||||| ||| || |||||||||||||||||||||||||||||
Sbjct: 75 tctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 135 cggagggagta 145
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
||||||||||||||||||||||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattttagcatttcccacat 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 133 ttcacaatgtaagtcattctagcattt 107
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct: 85 atgtctagattcactaacctccatatgaatgtgggaaatgctagaatgacttacattatg 144
Query: 120 aaacagagg 128
|||| ||||
Sbjct: 145 aaacggagg 153
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||| |||| || |||||||| | |||||||||||||||||||||||| ||||||
Sbjct: 73 tagattcactaacctctatatgaatataggaaatgctagaatgacttacattatgaaacg 14
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 13 gagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| ||||||||||||| |||||||| ||||||
Sbjct: 146 ttcataatgtaagtcattctagcatttcccacat 113
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 62 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 121
|||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 122 acagaggaagtag 134
|| |||| |||||
Sbjct: 125 acggagggagtag 137
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 77 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtagta 136
||||||||||||| || ||||| ||||||| |||||||||||||||| ||||||||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagtagta 2
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgttggtaatgctagaatgacttacattatga 18
Query: 121 aacagaggaagta 133
||| |||| ||||
Sbjct: 17 aacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||| ||||||||||||| |||| ||||||| ||||||||||||||||||||| |||||
Sbjct: 88 tctaaattcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaa 147
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 148 cggaggaagta 158
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 57 cacatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 116
|||||||||||||||||||||| | | ||||||||||| |||||||||| | ||||||||
Sbjct: 81 cacatgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacatt 22
Query: 117 gtgaaacagaggaagta 133
||||||| |||||||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| ||||| || ||| |||||||||| | |||||||||||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacg 149
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 75 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtag 132
Query: 135 t 135
|
Sbjct: 133 t 133
Score = 91.7 bits (46), Expect = 2e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| ||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 18 aaacggagggagta 5
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
||||||||||||||||||||||||||||| |||| ||| ||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 125 gaggaagta 133
|||||||||
Sbjct: 122 gaggaagta 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||| |||| | | |||||||||||||||||||| |||| ||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||| ||||||||||||| |||||||||||
Sbjct: 118 ttcacaatataagtcattttagtattttccacat 85
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 87.7 bits (44), Expect = 4e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctaga-atgacttacattgtgaa 121
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 122 acagaggaagta 133
|| |||| ||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 77 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtagta 136
|||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtagta 2
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 89 tgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||| ||||||||| |||| |||| ||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagggagta 107
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 14 tactactctctccgtt-cacaatgtaagtcattttagcattttccac 59
|||||||| ||||||| |||||||||||||||| |||||||| ||||
Sbjct: 2 tactactccctccgtttcacaatgtaagtcattctagcatttcccac 48
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||||||||||| ||||| |||| |||||||||| ||||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaa 119
Query: 123 cagaggaagtag 134
| |||| |||||
Sbjct: 120 cggagggagtag 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||| || ||||||||| | |||||| ||||||||||| |||| ||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagta 5
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||| ||| ||||| |||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 62 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 121
||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 122 acagaggaagta 133
||||||| ||||
Sbjct: 121 acagagggagta 132
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
||||| || |||| ||||||||||||||||||||| |||||| ||||||||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagtag 4
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||| ||||||||||| | | ||||||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaa 16
Query: 123 cagaggaagtag 134
| ||||||||||
Sbjct: 15 cggaggaagtag 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||| |||||||| | || ||||||||||||||||||||| |||||
Sbjct: 88 tctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaa 147
Query: 123 cagaggaagtagt 135
| |||| ||||||
Sbjct: 148 cggagggagtagt 160
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||| |||||||||||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 125 gaggaagtagta 136
|||| |||||||
Sbjct: 131 gagggagtagta 142
Score = 63.9 bits (32), Expect = 6e-10
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 14 tactactctctccgtt-cacaatgtaagtcattttagcattttccaca 60
|||||||| ||||||| |||||||||||||||| ||||||||||||||
Sbjct: 142 tactactccctccgtttcacaatgtaagtcattctagcattttccaca 95
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||| | |||| |||||||| |||||||||||||||||||
Sbjct: 60 atcaatataattgtgaaaaatgctaaaatgacttacattgtgaaa 16
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 70 tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagga 129
|||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 130 agta 133
||||
Sbjct: 8 agta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 96/112 (85%), Gaps = 6/112 (5%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacatgtcta--gat--tcat--taacatca 81
|||||||||||||||||||||||||||||||||| || ||| | || ||||||||
Sbjct: 17 ttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgataacatca 76
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||| |||||||| ||| | |||||||||||||| |||| ||||
Sbjct: 77 atatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 83 tatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtag 96
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 94 gaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 83 ttcacaatgtaagtcattctagcatttcccacat 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 71 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaa 130
||||||||| ||||| |||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 131 gtag 134
||||
Sbjct: 7 gtag 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 96 aatgctagaatgacttacattgtg 119
||||||||||||||||||||||||
Sbjct: 64 aatgctagaatgacttacattgtg 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| |||||||| | || ||||||||||||||||||||| ||
Sbjct: 78 atgtctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatg 19
Query: 120 aaacagaggaagtagt 135
|||| |||| ||||||
Sbjct: 18 aaacggagggagtagt 3
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||| ||||||||||| | | ||||||||||||||||||| |||||
Sbjct: 88 tctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaa 147
Query: 123 cagaggaagtag 134
| ||||||||||
Sbjct: 148 cggaggaagtag 159
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 123 cagaggaagtag 134
| ||||||||||
Sbjct: 120 cggaggaagtag 131
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||||||||||||||||||||| |||||||||| |||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 93.7 bits (47), Expect = 6e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||| |||||||| || | |||||||||| |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 123 cagaggaagtagtac 137
|||||||||||||||
Sbjct: 15 cagaggaagtagtac 1
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| |||| |||||||| |||| |||||||||| | |||| ||| |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||| |||||||| ||||||||| ||||| | |||||||| ||||| |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaa 135
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 136 cggagggagta 146
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||| |||||||||||||||| ||||
Sbjct: 134 ttcacaatgtaaatcattttagcattttctacat 101
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||| ||| ||||||||| |||||
Sbjct: 17 ttcacaatgtaagttattctagcatttttcacat 50
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 120 cggaggaagta 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||| |||||||||||| ||| ||||||||||||||| |||| |||| ||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcatttt 55
||||||||||||||||||||||||||||
Sbjct: 118 ttcacaatgtaagtcattttagcatttt 91
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 120 cggaggaagta 130
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||| ||||| ||||||||||||||||||| |||| |||| ||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcatttt 55
|||||||||||||||||| |||||||||
Sbjct: 118 ttcacaatgtaagtcattctagcatttt 91
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||| ||||||||||||| |||||||||| | |||||||| |||||
Sbjct: 88 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 147
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 148 cggaggaagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||||||||| ||||||||||| | ||||||| || | |||||||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatga 18
Query: 121 aacagaggaagta 133
||| |||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 78 atgtccagattcattaacatctatatgaatgtgggcaatgctagaatgacttatattatg 19
Query: 120 aaacagaggaa 130
|||| ||||||
Sbjct: 18 aaacggaggaa 8
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
|||||||||||| ||| ||| ||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 87 ctagattcattagtatctataagaatgtgggcaatcctagaatgacttatattgtgaaac 146
Query: 124 agaggaagtag 134
|||| |||||
Sbjct: 147 ggagggagtag 157
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||| ||||||||||||| |||||||||| | |||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||||||||| ||||||||||| | ||||||| || | |||||||| |||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatga 145
Query: 121 aacagaggaagta 133
||| |||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 127
|||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 128 gaagta 133
| ||||
Sbjct: 153 ggagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
||||||||||| |||| |||||||| | | ||||| |||||||||||||||||||||||
Sbjct: 73 tagattcattagcatctatatgaatatagaaaatgttagaatgacttacattgtgaaacg 14
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 13 gagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||||||||||
Sbjct: 146 ttcacaatgtaagtcattctagcattttccacat 113
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| | |||||||||| |||||||||| | |||||||||||
Sbjct: 78 atgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| |||||||||||||||| | ||||||||||| |||||||||| | |||||||||||
Sbjct: 78 atgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtg 19
Query: 120 aaacagaggaagta 133
||||||||| ||||
Sbjct: 18 aaacagagggagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 78 atgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatg 19
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| |||||||||| ||||| ||| |||||||||||||||| |||||
Sbjct: 88 tctagattcattagcatcaatatggatgtgaacaatagtagaatgacttacattatgaaa 147
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 148 cggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| ||||||||||||| |||||||||||||||
Sbjct: 17 ttcataatgtaagtcattctagcattttccacat 50
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| |||||||||||| |||||||||| | |||||||| ||
Sbjct: 59 atgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatg 118
Query: 120 aaacagaggaagta 133
||||||||| ||||
Sbjct: 119 aaacagagggagta 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||| |||||||||||| |||||||||| | |||||||| ||||| |||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 91.7 bits (46), Expect = 2e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 127
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 128 gaagta 133
||||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 95 aaatgctagaatgacttacattgtgaaacagagg 128
||||||||||||||||||||||||||||| ||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggagg 107
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttc 56
|||||||||||||||||| ||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattttc 45
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| ||||||||||||| ||| |||||| | |||||||||||
Sbjct: 85 atgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||| ||||||||||||| |||||||| |||| | | |||||| | ||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacattgtga 18
Query: 121 aacagaggaagta 133
||| |||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 78 atgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatg 19
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| |||| ||||| ||||| |||| ||||||||||||||||| |||||
Sbjct: 88 tctagattcattagcatcgatatggatgtgaaaaatactagaatgacttacattatgaaa 147
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 148 cggagggagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| ||||||||||||| |||||||||||||||
Sbjct: 17 ttcataatgtaagtcattctagcattttccacat 50
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| | |||||| |||| |||||||||| | |||||||||||
Sbjct: 78 atgtctagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| ||||| | ||||| ||| |||||| | |||||||||||||||
Sbjct: 90 tagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacg 149
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 72 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaag 131
|||||||||||||||||||||| |||| ||| |||||||||||||||||||| |||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 132 ta 133
||
Sbjct: 6 ta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||||||| |||||||||||
Sbjct: 17 ttcacaatgtaagtcattttagtattttccacat 50
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 127
|||||||||||||||||| || ||| ||||||||||||||||||||||||||||| |||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 128 gaagta 133
||||||
Sbjct: 126 gaagta 131
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 95 aaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||| |||||||||||||||||||| |||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcatttt 55
|||||||||||||||||| |||||||||
Sbjct: 119 ttcacaatgtaagtcattctagcatttt 92
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactta 112
|||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 52 atgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 116
|||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 13 gagggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccaca 60
|||||||||||||| ||| ||||||||||||||
Sbjct: 17 ttcacaatgtaagttattctagcattttccaca 49
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 105 atgacttacattgtgaaacagaggaagtagta 136
||||||||||||||||||| |||| |||||||
Sbjct: 98 atgacttacattgtgaaacggagggagtagta 129
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||| ||||| || |||| || |||||||||||||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaa 16
Query: 123 cagaggaagtagt 135
| |||||||||||
Sbjct: 15 cggaggaagtagt 3
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| ||||||||||| |||| ||||||||||||| ||||||| ||||||||||||| ||
Sbjct: 85 atgtttagattcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcatt 53
|||| |||||||||||||||||||||
Sbjct: 146 ttcataatgtaagtcattttagcatt 121
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 81 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 77 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaac 15
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 111
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 111
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| ||||||||||||| || |||||||| ||||||||| ||||||
Sbjct: 59 atgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtg 118
Query: 120 aaacagaggaagt 132
|||| ||||||||
Sbjct: 119 aaacggaggaagt 131
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaacagagaaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttcc 57
|||||||| |||||||||||||||||||||
Sbjct: 120 ttcacaatataagtcattttagcattttcc 91
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
||||||||||||||||||| |||||||||||| |||||||||| | |||||||| |||
Sbjct: 84 tgtctagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatga 143
Query: 121 aacagaggaagtagta 136
||| ||||||||||||
Sbjct: 144 aacggaggaagtagta 159
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
|||||||||||||||||||||||||| | || |||||||||| | |||||||| ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaac 15
Query: 124 agaggaagta 133
|||| ||||
Sbjct: 14 ggagggagta 5
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||||||||| ||||||||||| | |||||||| | | ||||||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtga 18
Query: 121 aacagaggaagtagta 136
||| |||| |||||||
Sbjct: 17 aacggagggagtagta 2
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||| || |||||||||| |||| || || | ||||||||||||||
Sbjct: 88 tctagattcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaa 147
Query: 123 cagaggaagtagt 135
| |||| ||||||
Sbjct: 148 cggagggagtagt 160
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 56/59 (94%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 79 tcaatatgaatgtgggaaatgctagaatgacttacattgtg-aaacagaggaagtagta 136
|||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagtagta 119
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
||||||||||||||| ||||| ||||||| |||||||||| | |||||||||||||||
Sbjct: 73 tagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacg 14
Query: 125 gaggaagtagt 135
|||||||||||
Sbjct: 13 gaggaagtagt 3
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| |||| | |||||| |||| |||||||||| | |||||||||||
Sbjct: 85 atgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||| |||||||| ||||||| | |||||| ||||||||| |||||||||||||||||||
Sbjct: 75 tctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||
Sbjct: 82 tctagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgtgaaa 141
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 142 cggagggagta 152
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||| |||||||||||||||||||||||||
Sbjct: 140 ttcacaatataagtcattttagcattttccacat 107
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| | |||||| |||| ||||||| || | |||||||||||
Sbjct: 85 atgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtg 144
Query: 120 aaacagaggaagtag 134
|||| ||||||||||
Sbjct: 145 aaacggaggaagtag 159
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
||||||||||||| || ||||| || || | |||||||||| | |||||||||||||||
Sbjct: 73 tagattcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaacg 14
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||||||||||||| | |||||||| | |||||||||| | ||||||||||||
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 121 aacagaggaagtagt 135
||| |||||||||||
Sbjct: 17 aacggaggaagtagt 3
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
||||||||||||||||| ||||| ||||||| |||||||||| | |||||||| ||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 124 agaggaagta 133
|||| ||||
Sbjct: 138 ggagggagta 147
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 136 cggagggagta 146
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| ||||||||| ||| || |||| |||||||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||| ||||| |||||||||| ||||
Sbjct: 134 ttcacaatgtaaatcattctagcattttctacat 101
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||||||||||| ||||||||| ||| || ||||| ||||||||||||| |||||||||
Sbjct: 75 tctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaa 16
Query: 123 cagaggaagta 133
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 94 gaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||| ||||||||||||| |||||| |||| ||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 59 catgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 118
|||||||||||||||||||||| ||||||||||||| |||||||||| | |||| | | |
Sbjct: 52 catgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatat 111
Query: 119 gaaacagaggaagta 133
||||| |||||||||
Sbjct: 112 gaaacggaggaagta 126
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 83.8 bits (42), Expect = 6e-16
Identities = 93/108 (86%), Gaps = 4/108 (3%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacatgtctagattcat--taacatcaatat 85
||||||||||||||||||||||||||| | ||| | || ||| || ||||||||||||
Sbjct: 17 ttcacaatgtaagtcattttagcattt--ctcatatttatattgatgttaacatcaatat 74
Query: 86 gaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||| || ||||||||| ||||||||| |||||||||| |||||||||
Sbjct: 75 aaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagta 122
Score = 75.8 bits (38), Expect = 1e-13
Identities = 92/108 (85%), Gaps = 4/108 (3%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacatgtctagattcat--taacatcaatat 85
|||||||| |||||||||||||||||| | ||| | || ||| || ||||||||||||
Sbjct: 110 ttcacaatataagtcattttagcattt--ctcatatttatattgatgttaacatcaatat 53
Query: 86 gaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||| || ||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 52 aaatatgagaaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||| ||
Sbjct: 64 atgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatg 123
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 124 aaacggagggagta 137
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 85 tgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtagta 136
|||||||||| ||||||||||| ||||||||| |||||| ||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggaggaagtagta 2
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| |||||||| |||| ||| |||||| | |||||||||||
Sbjct: 85 atgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||| ||||||||||||| |||||||| |||| | | |||||| | ||||||| ||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacatggtga 18
Query: 121 aacagaggaagta 133
||| |||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||||||| ||||||||| |||||||||||| |||||||||| | ||||||||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 121 aacagaggaagtag 134
||| |||| |||||
Sbjct: 128 aacggagggagtag 141
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||| |||||||| ||| ||||||| || | ||||||||||||||| |||| ||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
|||||||||||| |||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 124 agaggaagta 133
|||| ||||
Sbjct: 122 ggagggagta 131
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagagg 128
|||||||| || |||||| |||||||||||| |||||||||| ||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| |||| ||||||||||||| |||| ||||| | |||||||||||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||| |||| |||| ||||||||||||| ||||||| || | |||||||| ||||||
Sbjct: 73 tagatttattagcatctatatgaatgtgggtaatgctataaagtcttacattatgaaacg 14
Query: 125 gaggaagta 133
|||||||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 127
||||||||| ||| ||||||||||||| || ||||||| | |||||||||||||||||||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagag 108
Query: 128 gaagta 133
||||||
Sbjct: 109 gaagta 114
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 83.8 bits (42), Expect = 6e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
|||||||||||||||| |||||||||||| |||||||||||||||| |||| |||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||| |||||||||||| |||||||||||||||| |||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| |||||||||| | |||||||||| | |||||||| ||
Sbjct: 78 atgtctagattcattaacatctatatgaatgtagacaatgctagaaagtcttacattatg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| |||||||||||| || |||||| | |||||||| ||||||
Sbjct: 90 tagattcattaacatctatatgaatgtggacaaacctagaaagtcttacattatgaaacg 149
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
||||||||||||||| |||| || |||||||||| |||||||||| | |||||||| |||
Sbjct: 77 tgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 121 aacagaggaagtag 134
||| ||||||||||
Sbjct: 17 aacggaggaagtag 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| ||||||||| ||| |||||||||| | |||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| | ||||||||||| || |||| || | |||||||||||
Sbjct: 78 atgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| |||| ||||||| | ||||| || | |||| ||||||||||
Sbjct: 86 tagattcattaacatctttatgtatgtgggtagtgctaaaaagtcttatattgtgaaacg 145
Query: 125 gaggaagtag 134
|||| |||||
Sbjct: 146 gagggagtag 155
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| ||||| ||||| | |||||||||| | |||||||||||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 125 gaggaagta 133
|||||||||
Sbjct: 150 gaggaagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||| ||||||||||||| | |||||||| || ||| || || | ||||||||||
Sbjct: 78 atgtctatattcattaacatctaaatgaatgtaggcaatattaaaaagtcttacattgta 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||| ||||||||||||| ||||||||||||| |||||||||| | |||||||| |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 121 aacagaggaagta 133
||| |||| ||||
Sbjct: 17 aacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||| ||||||||||||| |||||||||| | |||||||| |||||| |||| ||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
|||||||||||||||| |||||||||||| |||||||||||||||| |||| |||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 79.8 bits (40), Expect = 9e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 78 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||| |||||||||||| |||||||||||||||| |||| ||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 81.8 bits (41), Expect = 2e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||| ||||| ||| | ||||| ||||||||||||| ||||||
Sbjct: 66 atgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatattgtg 125
Query: 120 aaacagaggaagtagta 136
|||| ||||||||||||
Sbjct: 126 aaacggaggaagtagta 142
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 83 tatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||| |||| |||||||||||||||||||||||| |||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| ||| |||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagtattttccacat 50
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 81 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||| ||| |||||||||||||||||||| |||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||||||| |||| ||||||
Sbjct: 97 ttcacaatgtaagtcattttagtatttcccacat 64
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 104 aatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||| |||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
||||||||||||||||||| ||||||||||||| || ||||||| | |||||||| |||
Sbjct: 77 tgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatga 18
Query: 121 aacagaggaagta 133
||| |||||||||
Sbjct: 17 aaccgaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| |||||||||| | ||| ||||||||||||| ||||||| || | |||||||| ||
Sbjct: 85 atgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtcttacattatg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaaccgagggagta 158
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 67 gattcattaacatcaatatgaatgtgggaaatgctagaatgactt 111
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 75.8 bits (38), Expect = 1e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 67 gattcattaacatcaatatgaatgtgggaaatgctagaatga 108
||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 77 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||| ||||| |||||||||||||||||||||||| |||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 77 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||| |||||| ||||| || ||||||||||||| ||||||||||| ||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| |||||||||||||||| |||||| |||||
Sbjct: 131 ttcataatgtaagtcattttaacatttttcacat 98
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| ||||||||||||| |||||||||| | |||||||| ||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 9e-15
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||| ||||||| | |||||||| |||||||| ||||||||||||| ||
Sbjct: 85 atgtctagattcactaacatccaagtgaatgtgaaaaatgctacaatgacttacattatg 144
Query: 120 aaacagaggaagtagt 135
||||||||| ||||||
Sbjct: 145 aaacagagggagtagt 160
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||| ||||||| |||| ||| || ||||||||||||||||||||||| ||||||
Sbjct: 73 tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 13 gagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||| ||||||||||||| ||||||||| |||||
Sbjct: 146 ttcataatgtaagtcattgtagcatttttcacat 113
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 79.8 bits (40), Expect = 9e-15
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 70 tcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagagga 129
||||| |||||||||| |||||| ||||||||||||||||||| ||||| |||| |||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 130 agta 133
||||
Sbjct: 90 agta 93
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 74 taacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||| |||||||||||||||||||||| ||||| |||||||||| |||| ||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 94 gaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtg 100
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 84 atgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||| ||||||||||||||| |||||||||||||| |||| ||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 30 cacaatgtaagtcattttagcattttccacat 61
||||||| ||||||||||||||||| ||||||
Sbjct: 100 cacaatgcaagtcattttagcatttcccacat 69
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 9e-15
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||| ||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 87 aatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 75.8 bits (38), Expect = 1e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
|||| |||||||||||||||||||||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaac 96
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 94 ttcacaatgtaagtcattctagcatttcccacat 61
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 137 ttcacaatgtaagtcattctagcatttcccacat 104
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 79 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||| || |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 96 aatgctagaatgacttacattgtgaaacagaggaagtagt 135
||||||||||||||||| |||||||||| || ||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaagaagtagt 106
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccac 59
|||||||||||||||||| |||||||| ||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccac 48
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctag 103
|||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatgctag 88
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatg 99
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 44 atgtctagattcattgacatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| |||| ||||||||||||| |||||||||| | |||| | | ||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatg 144
Query: 120 aaacagaggaagtag 134
|||| ||||||||||
Sbjct: 145 aaacggaggaagtag 159
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 69 ttcattaacatcaatatgaatgtgggaaatgctagaa 105
|||||||||||| |||||| |||||| ||||||||||
Sbjct: 69 ttcattaacatctatatgattgtgggcaatgctagaa 33
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| ||||||||||| ||||||||||||| || |||||| |||||||||||| ||||||
Sbjct: 85 atgtttagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtg 144
Query: 120 aaacagaggaagtag 134
||| |||| |||||
Sbjct: 145 gaacggagggagtag 159
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||| |||||||| ||||||||||||| ||| |||| ||||||||||||| | |||| ||
Sbjct: 75 tctaaattcattagcatcaatatgaatatggaaaatactagaatgacttatactgtggaa 16
Query: 123 cagaggaagtagt 135
| |||||||||||
Sbjct: 15 cggaggaagtagt 3
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| |||||||||||||||| ||||| ||||||| |||||||||| | |||| ||||||
Sbjct: 63 atgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtg 122
Query: 120 aaacagaggaagtag 134
|||| |||| |||||
Sbjct: 123 aaacggagggagtag 137
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| |||||||||||||||| ||||| ||||||| |||||||||| | |||| ||||||
Sbjct: 78 atgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtg 19
Query: 120 aaacagaggaagtag 134
|||| |||| |||||
Sbjct: 18 aaacggagggagtag 4
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 88 atgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||| ||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 96 aatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||| |||||||||||||| |||| ||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| |||||||||||| ||| ||| || | |||||||||||
Sbjct: 85 atgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||| |||||||||||| |||||||| |||| ||| |||||| | |||| ||| |||||
Sbjct: 75 tctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||| |||||||| ||| ||||||||||||| |||||||||| | |||||||||||
Sbjct: 53 atgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtg 112
Query: 120 aaacagaggaagta 133
|||| || ||||||
Sbjct: 113 aaacggatgaagta 126
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||| ||| |||| |||||||| || ||||||| | |||||||| ||
Sbjct: 78 atgtctagattcattagtatctatataaatgtgggcaacgctagaaagtcttacattatg 19
Query: 120 aaacagaggaagta 133
||||||||||||||
Sbjct: 18 aaacagaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
|||||||||||| ||| ||||||||||||| |||||||||| | |||||||| ||||||
Sbjct: 89 ctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaac 148
Query: 124 agaggaagta 133
|||| ||||
Sbjct: 149 ggagggagta 158
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 88 atgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 99 gctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||||||||||||||| |||| ||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 30 cacaatgtaagtcattttagcattttccacat 61
|||||||||||||||| |||||||| ||||||
Sbjct: 19 cacaatgtaagtcattctagcatttcccacat 50
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||||||||||| |||||||||||| ||| ||| || | |||||||||||
Sbjct: 78 atgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 18 aaacggagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
||||| |||||||||||| |||||||| |||| ||| |||||| | |||| ||| |||||
Sbjct: 88 tctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatgaaa 147
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||| ||||||||| | ||| ||||||| |||||||||| | |||||||||||
Sbjct: 85 atgtctagatttattaacatctaaatgtatgtgggcaatgctagaaagtcttacattgtg 144
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 145 aaacggagggagta 158
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| |||||||||||||||| | ||||||| || ||| ||| || | |||||||||||
Sbjct: 78 atgtttagattcattaacatctaaatgaatggaggtaatactataaagtcttacattgtg 19
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 18 aaacggaggaagta 5
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
||||||||||||| ||||||| ||| |||||||| ||||| |||||||||||||||| |
Sbjct: 65 atgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattata 124
Query: 120 aaacagaggaagta 133
|||| |||| ||||
Sbjct: 125 aaacggagggagta 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||| ||||||||||| |||||| |||||||||||||||| |||||| |||| ||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| ||||||||||||| |||||||||| | |||| | | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 125 gaggaagta 133
|||||||||
Sbjct: 124 gaggaagta 132
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 81 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||| ||| ||| |||||||||||||||| |||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 81 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||| ||||| || ||| |||||||||||||||| |||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 88 atgtgggaaatgctagaatgacttacattgtgaaacagaggaagtagta 136
||||||||||||||||||||||||||||| |||||| |||| |||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagtagta 131
Score = 63.9 bits (32), Expect = 6e-10
Identities = 104/127 (81%), Gaps = 7/127 (5%)
Strand = Plus / Minus
Query: 14 tactactctctccgtt-cacaatgtaagtcattttagcattttccacatgt------cta 66
|||||||| ||||||| || ||||||||||||| |||||||| |||||| | |||
Sbjct: 131 tactactccctccgtttcataatgtaagtcattctagcatttcccacatctatatatcta 72
Query: 67 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacaga 126
|||||| ||| || |||| |||||| |||||| |||||||||||| ||| |||||| |
Sbjct: 71 gattcactaatttccatataaatgtgagaaatgttagaatgacttatattatgaaacgaa 12
Query: 127 ggaagta 133
|||||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 89 tgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 84 atgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||| ||||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccaca 60
|||||||||||||||||| ||||||||||||||
Sbjct: 96 ttcacaatgtaagtcattctagcattttccaca 64
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 86 gaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
|||||||| || |||||||||||||||||||||||||| ||||||||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagtag 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| ||||| |||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcactttccacat 50
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| ||||||||||||| |||||||||| | |||| | | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 125 gaggaagta 133
|||||||||
Sbjct: 124 gaggaagta 132
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| ||||||||||||| |||||||||| | |||| | | ||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 125 gaggaagta 133
|||||||||
Sbjct: 13 gaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaa 105
|||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaa 132
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||| ||| |||||||| |||||||||| | |||||||| |||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 123 cagaggaagtagt 135
| |||| ||||||
Sbjct: 15 ctgagggagtagt 3
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||||||||| |||||||||| | |||||||| ||||| |||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
||||||||||||||||||| |||||||||||| |||||||||| | |||| | | |||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataatatga 122
Query: 121 aacagaggaagta 133
|||||||||||||
Sbjct: 123 aacagaggaagta 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtagt 135
||||||||||||| |||||||||| | |||| | | ||||| |||||||||||
Sbjct: 56 atatgaatgtgggtaatgctagaaagtcttataataagaaacggaggaagtagt 3
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| | ||||||||||| |||||||||| | ||| |||| ||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacg 14
Query: 125 gaggaagta 133
|||||||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
||||||||||| |||||||| |||||||||||| |||||||||| | |||||||| |||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 121 aacagagg 128
||| ||||
Sbjct: 96 aacggagg 103
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 94 gaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatg 107
||||||||||||||||||| | |||||||||||| |||||||||||||
Sbjct: 48 atgtctagattcattaacacctatatgaatgtggaaaatgctagaatg 1
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatg 107
|||||||||||||||| | |||||||||||||||||| |||||||
Sbjct: 58 tctagattcattaacacctatatgaatgtgggaaatgttagaatg 102
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||| |||||||| || || ||||||||||||||||||| ||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 125 gagg 128
||||
Sbjct: 13 gagg 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||| ||||||||||||||||||| |||||
Sbjct: 125 ttcacaatataagtcattttagcatttttcacat 92
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 105
|||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 47 tctagattcattaacatccatatgaatgtgggcaatgctagaa 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 105
|||||||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 64 tgtctagattcattaacatccatatgaatgtgggcaatgttagaa 108
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 69.9 bits (35), Expect = 9e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtag 134
||||||||||||||||| |||| ||| |||||||||||||||||||| |||| |||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagtag 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 79 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||| |||| ||||||||||||||||| |||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaa 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 16 ctactctctccgtt-cacaatgtaagtcattttagcattttccacat 61
|||||| ||||||| |||||||||||||||| ||| ||||| |||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagtatttttcacat 50
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 87 aatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 86 gaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtagta 136
|||| ||| ||||||||||||||||| ||||||||||| |||| |||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagtagta 2
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
|||||||||||||||||| |||||||||||||||
Sbjct: 104 ttcacaatgtaagtcattctagcattttccacat 71
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 14 tactactctctccgtt-cacaatgtaagtcattttagcattttcca 58
|||||||| ||||||| ||||||| |||||||| ||||||||||||
Sbjct: 2 tactactccctccgtttcacaatgcaagtcattctagcattttcca 47
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 87 aatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||| ||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 100 ctagaatgacttacattgtgaaacagaggaagta 133
|||||||||||||||||||||||| |||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattt 54
|||||||||||||||||| ||||||||
Sbjct: 77 ttcacaatgtaagtcattctagcattt 51
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 69.9 bits (35), Expect = 9e-12
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 59 catgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 118
||||||||||||||||||| | ||||||||||||| |||||||||| | |||| | | |
Sbjct: 79 catgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatat 20
Query: 119 gaaacagaggaagtagtac 137
||||| |||| ||||||||
Sbjct: 19 gaaacggagggagtagtac 1
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 69.9 bits (35), Expect = 9e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 59 catgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 118
||||||||||||||||||| | ||||||||||||| |||||||||| | |||| | | |
Sbjct: 54 catgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatat 113
Query: 119 gaaacagaggaagtagtac 137
||||| |||| ||||||||
Sbjct: 114 gaaacggagggagtagtac 132
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 69.9 bits (35), Expect = 9e-12
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||||||||||||||||||| ||||||||||||| |||||||||| | |||| | | ||
Sbjct: 59 atgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttg 118
Query: 120 aaacagaggaagtag 134
|||| |||| |||||
Sbjct: 119 aaacggagggagtag 133
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 105
|||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 89 tctagattcattaacatctatatgaatgtgggcaatgctagaa 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 61 tgtctagattcatt-aacatcaatatgaatgtgggaaatgctagaa 105
|||||||||| ||| |||||| ||||||||||||| ||||||||||
Sbjct: 78 tgtctagattaatttaacatctatatgaatgtgggtaatgctagaa 33
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 72 attaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaag 131
||||| |||||||| |||||| |||| |||||||||||| ||||||||||| |||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 132 ta 133
||
Sbjct: 107 ta 108
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 101 tagaatgacttacattgtgaaacagaggaagta 133
||||||||||||||||||||||| |||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 127
||||||||||||| ||||| || || | ||||||| |||| ||||||||||||||| |||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 128 gaagta 133
||||||
Sbjct: 132 gaagta 137
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcatt 53
||||||||||||| ||||||||||||
Sbjct: 125 ttcacaatgtaagacattttagcatt 100
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 60 atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtg 119
|||| |||||||| ||||||| | |||||||||| || |||||||| | |||||||||||
Sbjct: 67 atgtttagattcaataacatctaaatgaatgtggcaa-tgctagaaagtcttacattgtg 125
Query: 120 aaacagaggaagta 133
|||| |||||||||
Sbjct: 126 aaacggaggaagta 139
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 123
|||||||| |||||||| ||||||||||||| |||||||||| | |||| | | ||||||
Sbjct: 74 ctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 15
Query: 124 agaggaagta 133
|||||||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 68 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagag 127
||||||||||||| ||||| || || | ||||||| |||| ||||||||||||||| |||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 128 gaagta 133
||||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcatt 53
||||||||||||| ||||||||||||
Sbjct: 17 ttcacaatgtaagacattttagcatt 42
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaa 105
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 58 acatgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 105
|||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 56 acatgtctagattcattaacatatatatgaatgtggacaatgctagaa 9
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 62 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 121
||||||||||||||| ||| ||||| || |||| ||| |||||||||||||||| ||||
Sbjct: 76 gtctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaa 17
Query: 122 acagaggaagtagt 135
|| |||| ||||||
Sbjct: 16 acggagggagtagt 3
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||||||||| | ||||||||||||||||||||| |||||| |||||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaa 105
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaa 105
|||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 50 ctagattcattaacatatatatgaatatgggcaatgctagaa 9
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||| ||| | || ||||||| ||||||| || | ||||||||||||||
Sbjct: 86 tctagattcattaatatctaaataaatgtggacaatgctaaaaagtcttacattgtgaaa 145
Query: 123 cagaggaagtagta 136
| ||||||||||||
Sbjct: 146 cggaggaagtagta 159
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 122
|||||||||||||||||| |||| |||||| |||| ||||| | |||||||| |||||
Sbjct: 73 tctagattcattaacatctatat--atgtggacaatggtagaaagtcttacattatgaaa 16
Query: 123 cagaggaagta 133
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 28 ttcacaatgtaagtcattttagcattttccacat 61
||||||||||||| | |||||||||| |||||||
Sbjct: 144 ttcacaatgtaagactttttagcattgtccacat 111
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 64 ctagattcattaacatcaatatgaatgtgggaaatgctagaa 105
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctagaa 105
||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 51 tctagattcattaacatatatatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
|||||| ||||||||||||| ||||||||||||| ||||||| || | ||||||| |||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatga 129
Query: 121 aacagaggaagta 133
||| |||| ||||
Sbjct: 130 aacggagggagta 142
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 76 acatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
||||| ||||||||||||| |||||||||| | |||||||| |||||| |||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 61 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 120
||||||||||||||||||| ||| | ||| || |||||||| ||||||||| |||||||
Sbjct: 77 tgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtga 18
Query: 121 aacagaggaagta 133
||| || ||||||
Sbjct: 17 aacggaagaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 28 ttcacaatgtaagtcattttagcatttt 55
|||||||| |||||||||||||||||||
Sbjct: 17 ttcacaatataagtcattttagcatttt 44
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 82 atatgaatgtgggaaatgctagaatgacttacattgtgaaacagagg 128
||||||||||| ||||| || ||||||||| |||||||||| ||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggagg 125
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 77 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagta 133
|||| ||||||||||||| || ||||||| | ||||||||||||||| |||||||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 77 catcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacagaggaagtagta 136
|||| ||||||||||||| |||||||||| ||||||||||||||| |||| |||||||
Sbjct: 64 catctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagtagta 123
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctag 103
|||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 41 tctagattcattaatatcaatatgaacgtgggaaatgctag 1
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 63 tctagattcattaacatcaatatgaatgtgggaaatgctag 103
|||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 51 tctagattcattaatatcaatatgaacgtgggaaatgctag 91
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 65 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 124
|||||||||||||||| ||||||||||||| ||| |||||| | |||| | | |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaaca 14
Query: 125 gaggaagta 133
|||| ||||
Sbjct: 13 gagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 tagattcattaacatcaatatgaatgtggg 94
|||||||||||||||| |||||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtggg 121
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 58 acatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 117
|||| |||||||| ||||||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 80 acatatctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacatta 21
Query: 118 tgaaa 122
|||||
Sbjct: 20 tgaaa 16
