miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;ABQO010742775.1/373-435 9315:Macropus eugenii
(tammar wallaby)
Length = 63
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 catcatcatcatcttcttctctt 51
|||||||||||||||||||||||
Sbjct: 38 catcatcatcatcttcttctctt 60
>RF01059;mir-598;AAFR03043215.1/1072-1016 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 57
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 27 atcatcatcatcatcttcttct 48
||||||||||||||||||||||
Sbjct: 22 atcatcatcatcatcttcttct 1
>RF01059;mir-598;AAQQ01282491.1/3271-3329 43179:Spermophilus
tridecemlineatus (thirteen-lined ground squirrel)
Length = 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 27 atcatcatcatcatcttcttct 48
||||||||||||||||||||||
Sbjct: 28 atcatcatcatcatcttcttct 7
>RF01059;mir-598;AAHY01105911.1/400-306 10090:Mus musculus (house
mouse)
Length = 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 27 atcatcatcatcatcttcttct 48
||||||||||||||||||||||
Sbjct: 43 atcatcatcatcatcttcttct 22
>RF01059;mir-598;AAWZ01049713.1/1510-1420 28377:Anolis
carolinensis (green anole)
Length = 91
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 27 atcatcatcatcatcttcttct 48
||||||||||||||||||||||
Sbjct: 70 atcatcatcatcatcttcttct 91
>RF01059;mir-598;AAWZ01006914.1/74932-75009 28377:Anolis
carolinensis (green anole)
Length = 78
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 27 atcatcatcatcatcttcttct 48
||||||||||||||||||||||
Sbjct: 28 atcatcatcatcatcttcttct 7
>RF01059;mir-598;BX842696.13/67074-67012 7955:Danio rerio
(zebrafish)
Length = 63
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 27 atcatcatcatcatcttcttct 48
||||||||||||||||||||||
Sbjct: 28 atcatcatcatcatcttcttct 7
